BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780225|ref|YP_003064638.1| peptidyl-tRNA hydrolase
[Candidatus Liberibacter asiaticus str. psy62]
(189 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
Results from round 1
>gi|254780225|ref|YP_003064638.1| peptidyl-tRNA hydrolase [Candidatus Liberibacter asiaticus str.
psy62]
gi|254039902|gb|ACT56698.1| peptidyl-tRNA hydrolase [Candidatus Liberibacter asiaticus str.
psy62]
Length = 189
Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/189 (100%), Positives = 189/189 (100%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK
Sbjct: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE
Sbjct: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF
Sbjct: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Query: 181 LNHIVSVRK 189
LNHIVSVRK
Sbjct: 181 LNHIVSVRK 189
>gi|315122335|ref|YP_004062824.1| peptidyl-tRNA hydrolase [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495737|gb|ADR52336.1| peptidyl-tRNA hydrolase [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 196
Score = 285 bits (730), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/186 (73%), Positives = 159/186 (85%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFIVAGLGNPG+EY ENRHNIGFMC+DRIHSFH FP+WKKKF AEISE LD +R IL+K
Sbjct: 1 MFIVAGLGNPGNEYSENRHNIGFMCVDRIHSFHSFPSWKKKFSAEISEKHLDDIRIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+SL+EV+NFYKL +L+N L+IHD+LDL G LRLKTGGGDAGHNGLKSISE
Sbjct: 61 PQTFMNLSGKSLIEVINFYKL-SLQNCLIIHDELDLSLGILRLKTGGGDAGHNGLKSISE 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
KCGKNYKRLRIGIGRP + ++I+HVL +F E+ L PI+DNIAR +PLL K+ED F
Sbjct: 120 KCGKNYKRLRIGIGRPQNKEYVIKHVLSDFYPSEQSVLFPILDNIARHIPLLVKKEDDLF 179
Query: 181 LNHIVS 186
LN++V
Sbjct: 180 LNYVVQ 185
>gi|49473973|ref|YP_032015.1| peptidyl-tRNA hydrolase [Bartonella quintana str. Toulouse]
gi|68052956|sp|Q6G0F9|PTH_BARQU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|49239476|emb|CAF25828.1| Peptidyl-tRNA hydrolase [Bartonella quintana str. Toulouse]
Length = 193
Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 135/189 (71%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y NRHNIGFM ID I+ F W KKF AEIS G +DG +T LIK
Sbjct: 1 MWLIAGLGNPGLQYQNNRHNIGFMVIDAIYQSFSFSPWSKKFQAEISNGLIDGEKTFLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ EV+ FYKL +L+N++VI D+LDL G +R+KT GG+ GHNG+KSI
Sbjct: 61 PQTFMNLSGQAIGEVLRFYKL-DLKNFIVICDELDLPPGKVRVKTAGGNNGHNGIKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG +Y R+R+GIG P + +HVLGNF+ ++ +L P++D IA+++ LL K + F
Sbjct: 120 HCGTDYCRVRLGIGHPGSKELVHQHVLGNFTKSDQEWLSPLLDAIAKNIALLIKGDRCLF 179
Query: 181 LNHIVSVRK 189
++ I K
Sbjct: 180 MDTISQATK 188
>gi|319898491|ref|YP_004158584.1| Peptidyl-tRNA hydrolase [Bartonella clarridgeiae 73]
gi|319402455|emb|CBI75996.1| Peptidyl-tRNA hydrolase [Bartonella clarridgeiae 73]
Length = 192
Score = 200 bits (509), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 129/185 (69%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM ++ IH F W KKF AEIS G ++ + ILIK
Sbjct: 1 MLLIAGLGNPGSQYQNNRHNIGFMAVNTIHQILSFSPWSKKFQAEISNGLINSEKIILIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E + FYKL +L N +VI+D+LDL G +R+K GGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEALRFYKL-DLNNLIVIYDELDLPPGKIRIKIGGGSNGHNGIKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG NY R+R+GIG P + ++VLGNF+ ++ +L P++D IA ++ LL KR + F
Sbjct: 120 HCGTNYHRIRLGIGHPGAKELVNQYVLGNFTKSDQEWLSPLLDAIAHNIALLIKRNNNCF 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIT 184
>gi|319403818|emb|CBI77402.1| Peptidyl-tRNA hydrolase [Bartonella rochalimae ATCC BAA-1498]
Length = 197
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 128/185 (69%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y NRHNIGFM I+ IH F W KKF AEIS G ++ + ILIK
Sbjct: 1 MLLIAGLGNPGSHYNNNRHNIGFMAINVIHQIFSFSPWSKKFQAEISNGFINDEKIILIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E + FYKL +L N +VI+D+LDL G +R+K GGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEALRFYKL-DLNNLIVIYDELDLPPGKIRIKIGGGSNGHNGIKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG NY RLR+GIG P + ++VLGNF+ ++ +L P++D IA ++ LL KR + F
Sbjct: 120 HCGTNYCRLRLGIGHPGPKELVNQYVLGNFTKSDQEWLTPLLDAIANNMELLIKRNNNCF 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIT 184
>gi|319406825|emb|CBI80458.1| Peptidyl-tRNA hydrolase [Bartonella sp. 1-1C]
Length = 196
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 127/184 (69%), Gaps = 1/184 (0%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++AGLGNPG Y NRHNIGFM I+ IH F W KKF AEIS G ++ + ILIKP
Sbjct: 1 MLIAGLGNPGSHYNNNRHNIGFMAINVIHQIFSFSPWSKKFQAEISNGFINDEKIILIKP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSGQS+ E + FYKL +L N +VI+D+LDL G +R+K GGG GHNG+KSI
Sbjct: 61 QTFMNLSGQSIGEALRFYKL-DLNNLIVIYDELDLPPGKIRIKIGGGSNGHNGIKSIDSH 119
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
CG NY RLR+GIG P + ++VLGNF+ ++ +L P++D IA ++ LL KR + F+
Sbjct: 120 CGTNYCRLRLGIGHPGPKELVNQYVLGNFTKSDQEWLAPLLDAIANNMELLIKRNNNCFM 179
Query: 182 NHIV 185
N I
Sbjct: 180 NKIT 183
>gi|319405259|emb|CBI78870.1| Peptidyl-tRNA hydrolase [Bartonella sp. AR 15-3]
Length = 197
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 127/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y NRHNIGFM ++ IH FP W KKF AEIS ++ + ILIK
Sbjct: 1 MLLIAGLGNPGAHYKNNRHNIGFMAVNVIHQTFSFPPWSKKFQAEISTNFINNEKIILIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E + FYKL +L N +VI+D+LDL G +R+K GGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIREALRFYKL-DLNNLIVIYDELDLLPGKIRIKIGGGSNGHNGIKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG NY R+R+GIG P + ++VLGNF ++ +L P++D IA ++ LL KR + F
Sbjct: 120 HCGTNYCRIRLGIGHPGPKELVNQYVLGNFIKSDQEWLTPLLDAIANNMELLIKRNNNCF 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIT 184
>gi|312114467|ref|YP_004012063.1| peptidyl-tRNA hydrolase [Rhodomicrobium vannielii ATCC 17100]
gi|311219596|gb|ADP70964.1| peptidyl-tRNA hydrolase [Rhodomicrobium vannielii ATCC 17100]
Length = 713
Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats.
Identities = 85/189 (44%), Positives = 130/189 (68%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +D + + F WKK+F ++EGQ+ R IL+K
Sbjct: 1 MKLIVGLGNPGEKYAGNRHNIGFMAVDEMARGYGFAPWKKRFQGFVAEGQIGLQRCILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E M FYK+ + + +VIHD++DL+ G +RLKTGGG+AGHNGLKSI+
Sbjct: 61 PATYMNESGRAVGEAMRFYKIA-IGDVIVIHDEIDLEPGKIRLKTGGGNAGHNGLKSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+R+G+G P D A + +VL +F+ + +L+P+++ +AR + L ++ SF
Sbjct: 120 HVGNDYRRVRLGVGHPGDKALVANYVLHDFAKADNEWLVPVLEGVARGMSNLVDGKEASF 179
Query: 181 LNHIVSVRK 189
L+ RK
Sbjct: 180 LSEAARGRK 188
>gi|121602644|ref|YP_989278.1| peptidyl-tRNA hydrolase [Bartonella bacilliformis KC583]
gi|166199307|sp|A1UTH5|PTH_BARBK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|120614821|gb|ABM45422.1| peptidyl-tRNA hydrolase [Bartonella bacilliformis KC583]
Length = 193
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 126/184 (68%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y NRHNIGFM +D IH F W KKF AE+S G ++G + +LIK
Sbjct: 1 MLLIAGLGNPGSHYQNNRHNIGFMAVDAIHEAFSFSPWSKKFQAEVSNGLINGEKILLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ E + FYKL +L++ +V +D+LDL GT+R+K GG GHNG+KSI
Sbjct: 61 PQTFMNLSGQAIGEALRFYKL-DLDHLIVFYDELDLPPGTVRVKIGGRSNGHNGIKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG NY +R+GIGRP + ++VLGNF+ ++ +L ++ IA ++ +L K + F
Sbjct: 120 HCGNNYHHVRLGIGRPISKELVDQYVLGNFTQSDQKWLSTLLGVIANNVAMLIKGDSNCF 179
Query: 181 LNHI 184
+N I
Sbjct: 180 MNKI 183
>gi|209550347|ref|YP_002282264.1| peptidyl-tRNA hydrolase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|226707861|sp|B5ZY55|PTH_RHILW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|209536103|gb|ACI56038.1| Aminoacyl-tRNA hydrolase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 243
Score = 184 bits (468), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 127/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH H F W KKF AEI+EG+L G + +LIK
Sbjct: 1 MLIIAGLGNPGGKYAGNRHNIGFMAVDAIHRRHSFSPWSKKFRAEIAEGELGGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+++ E M FYKL + + I+D+LDL G RLKTGGG GHNG+KS+
Sbjct: 61 PQTFMNLSGEAVGEAMRFYKL-QPADLVAIYDELDLPAGKARLKTGGGHGGHNGIKSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P + HVLG+F+ ++ +L P++D +A + +L + ED
Sbjct: 120 HCGKEYRRLRLGIGHPGIKEMVQNHVLGDFAKADKAWLEPLLDTLADNADMLVRNEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|110634507|ref|YP_674715.1| peptidyl-tRNA hydrolase [Mesorhizobium sp. BNC1]
gi|119390958|sp|Q11GC5|PTH_MESSB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110285491|gb|ABG63550.1| peptidyl-tRNA hydrolase [Chelativorans sp. BNC1]
Length = 239
Score = 184 bits (466), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y +RHN+GFM D I H F W KKF A ++EG++ + +L+K
Sbjct: 1 MLLLAGLGNPGPQYQNHRHNVGFMAADAIFRRHSFSPWSKKFSALVAEGRVGTEKLLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ E M FYKL + +V +D+LDL G +R+K G G GHNG+KSI
Sbjct: 61 PQTFMNLSGQAVGEAMRFYKL-QPSDIIVFYDELDLAPGKVRVKRGSGSGGHNGIKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG++Y+R+RIGIG P D A + HVLG+F+ + +L P++D +A ++ LL ++ F
Sbjct: 120 HCGQDYRRVRIGIGHPGDKARVTPHVLGDFAKADHAWLDPLLDAMAENVDLLITGDESGF 179
Query: 181 LN 182
+N
Sbjct: 180 MN 181
>gi|327188357|gb|EGE55574.1| peptidyl-tRNA hydrolase protein [Rhizobium etli CNPAF512]
Length = 243
Score = 183 bits (465), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 127/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH H F W KKF AEI+EG+L G + +LIK
Sbjct: 1 MLIIAGLGNPGGKYAGNRHNIGFMAVDAIHRRHSFSPWSKKFKAEIAEGELGGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E M FYKL + + I+D+LDL G RLKTGGG GHNG++S+
Sbjct: 61 PQTYMNLSGEAVGEAMRFYKL-QPADLVAIYDELDLSPGKARLKTGGGHGGHNGIRSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P + HVLG+F+ +R +L P++D +A + +L + ED
Sbjct: 120 HCGKEYRRLRLGIGHPGIKEMVQNHVLGDFAKADRDWLEPLLDTLADNADMLVRNEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|241205732|ref|YP_002976828.1| peptidyl-tRNA hydrolase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240859622|gb|ACS57289.1| peptidyl-tRNA hydrolase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 243
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 127/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH H F W KKF AEI+EG++ G + +LIK
Sbjct: 1 MLIIAGLGNPGGKYAGNRHNIGFMAVDAIHRRHGFSPWSKKFRAEIAEGEVAGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E M FYKL + + I+D+LDL G RLKTGGG GHNG+KS+
Sbjct: 61 PQTFMNLSGESVGEAMRFYKL-QPTDLVAIYDELDLPQGKARLKTGGGHNGHNGIKSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG+ Y+RLR+GIG P + HVLG+F+ ++ +L P++D +A + +L + ED
Sbjct: 120 HCGREYRRLRLGIGHPGIKEMVQNHVLGDFAKADKAWLEPLLDTLADNADMLVRNEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|150397464|ref|YP_001327931.1| peptidyl-tRNA hydrolase [Sinorhizobium medicae WSM419]
gi|150028979|gb|ABR61096.1| Aminoacyl-tRNA hydrolase [Sinorhizobium medicae WSM419]
Length = 248
Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 129/185 (69%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D I F +W KKF +EISEG++DG R +L+K
Sbjct: 10 MLIIAGLGNPGPKYAGNRHNIGFMAVDAIQGRQGFSSWSKKFKSEISEGEIDGERVLLMK 69
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG++L + M FYKL ++ +VI+D+LDL G R+KTGGG GHNG+KSI
Sbjct: 70 PQTFMNLSGEALGDAMRFYKLAP-KDIVVIYDELDLPAGKARIKTGGGHGGHNGIKSIDA 128
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG+ Y+RLR+GIG P + HVLG+F+ +R ++ P+++ IA + +L K ED
Sbjct: 129 HCGREYRRLRLGIGHPGAKDLVHAHVLGDFAKADRAWVSPLLEAIADNAGMLVKGEDSQL 188
Query: 181 LNHIV 185
+N I
Sbjct: 189 MNKIA 193
>gi|116253216|ref|YP_769054.1| peptidyl-tRNA hydrolase [Rhizobium leguminosarum bv. viciae 3841]
gi|119390989|sp|Q1MDL5|PTH_RHIL3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|115257864|emb|CAK08962.1| putative peptidyl-tRNA hydrolase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 243
Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 127/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH H F W KKF AEI+EG++ G + +L+K
Sbjct: 1 MLIIAGLGNPGGKYAGNRHNIGFMAVDAIHRRHGFSPWSKKFRAEIAEGEVGGEKVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E M FYKL + + I+D+LDL G RLKTGGG GHNG+KS+
Sbjct: 61 PQTFMNLSGESVGEAMRFYKL-QPADLVAIYDELDLPQGKARLKTGGGHNGHNGIKSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG+ Y+RLR+GIG P + HVLG+F+ ++ +L P++D +A + +L + ED
Sbjct: 120 HCGREYRRLRLGIGHPGIKDMVQNHVLGDFAKADKAWLEPLLDTLADNADMLVRNEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|163761600|ref|ZP_02168671.1| peptidyl-tRNA hydrolase [Hoeflea phototrophica DFL-43]
gi|162281196|gb|EDQ31496.1| peptidyl-tRNA hydrolase [Hoeflea phototrophica DFL-43]
Length = 247
Score = 180 bits (456), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 127/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y ++RHN+GFM D I H F + KKF EI++G++ G + +L+K
Sbjct: 1 MLLIAGLGNPGPQYAKHRHNVGFMAADAIARRHSFSGFSKKFRGEIADGEIAGEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG S+ E M FYKL + + +VIHD+LDL G LRLKTGGG GHNGLKSI
Sbjct: 61 PMTFMNLSGDSVGEAMRFYKL-SPSDIIVIHDELDLAPGKLRLKTGGGHGGHNGLKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK+YKRLR+GIG P + HVLG+FS + +L P++D IA L+AK +D F
Sbjct: 120 HCGKDYKRLRVGIGHPGHKDRVNSHVLGDFSKADLVWLEPLLDTIADHADLMAKGDDAGF 179
Query: 181 LNHIV 185
LN I
Sbjct: 180 LNKIA 184
>gi|49475909|ref|YP_033950.1| peptidyl-tRNA hydrolase [Bartonella henselae str. Houston-1]
gi|68052957|sp|Q6G2L1|PTH_BARHE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|49238717|emb|CAF27969.1| Peptidyl-tRNA hydrolase [Bartonella henselae str. Houston-1]
Length = 193
Score = 180 bits (456), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 134/189 (70%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y NRHNIGFM ID I+ F W KKF AEIS G ++G +T L+K
Sbjct: 1 MWLIAGLGNPGLQYQNNRHNIGFMAIDAIYQSFSFSPWSKKFQAEISTGLINGKKTFLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ E + FYKL +L+N++VI+D+LDL G +R+K GGG+ GHNG+KSI
Sbjct: 61 PQTFMNLSGQAIGEALRFYKL-DLKNFIVIYDELDLPPGRVRVKIGGGNNGHNGIKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG +Y R+R+GIGRP + +HVLGNF+ ++ +L +++ IA+++ LL K F
Sbjct: 120 HCGTDYCRIRLGIGRPNSKELVYQHVLGNFTKSDQEWLPSLLEAIAKNIALLIKGNKCLF 179
Query: 181 LNHIVSVRK 189
+N I K
Sbjct: 180 MNEISQAMK 188
>gi|86358630|ref|YP_470522.1| peptidyl-tRNA hydrolase [Rhizobium etli CFN 42]
gi|119390988|sp|Q2K5U1|PTH_RHIEC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86282732|gb|ABC91795.1| peptidyl-tRNA hydrolase protein [Rhizobium etli CFN 42]
Length = 240
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 125/185 (67%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGF+ +D IH H F W KKF A I+EG+L G + +LIK
Sbjct: 1 MLIIAGLGNPGSKYAGNRHNIGFLAVDAIHRRHSFSPWSKKFKAAIAEGELGGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E M FYKL + + I+D+LDL G RLKTGGG GHNG+KS+
Sbjct: 61 PQTYMNLSGEAVGEAMRFYKL-QPADLVAIYDELDLPAGKARLKTGGGHGGHNGIKSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P + HVLG+F+ + +L P++D +A + +L + ED
Sbjct: 120 HCGKEYRRLRLGIGHPGVKEMVQNHVLGDFAKADNAWLEPLLDTLADNADMLVRNEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|218670312|ref|ZP_03519983.1| peptidyl-tRNA hydrolase [Rhizobium etli GR56]
Length = 243
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 126/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH H F W KKF EI+EG+L G + +LIK
Sbjct: 1 MLIIAGLGNPGAKYAGNRHNIGFMAVDAIHRRHSFSPWSKKFRGEIAEGELAGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E M FYKL + + I+D+LDL G RLKTGGG GHNG++S+
Sbjct: 61 PQTYMNLSGEAVGEAMRFYKL-QPADLVAIYDELDLPAGKARLKTGGGHGGHNGIRSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P + HVLG+F+ ++ ++ P++D +A + +L + ED
Sbjct: 120 HCGKEYRRLRLGIGHPGVKEMVQSHVLGDFTRADKAWVEPLLDTLADNADMLVRNEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|222086598|ref|YP_002545132.1| peptidyl-tRNA hydrolase [Agrobacterium radiobacter K84]
gi|254783845|sp|B9J795|PTH_AGRRK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|221724046|gb|ACM27202.1| peptidyl-tRNA hydrolase [Agrobacterium radiobacter K84]
Length = 238
Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/185 (52%), Positives = 125/185 (67%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +D IH H F W KKF AEISEG+L G + +LIK
Sbjct: 1 MLLIVGLGNPGAKYQGNRHNIGFMAVDAIHRRHSFSPWAKKFRAEISEGELGGQKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E M FYKL + +VI+D+LDL RLKTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGESVGEAMRFYKL-EPSDLVVIYDELDLPAAKARLKTGGGHGGHNGIKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG+ Y+RLR+GIG P + HVLG+F+ +R +L P+ D +A + +L + ED
Sbjct: 120 HCGREYRRLRLGIGHPGVKELVQNHVLGDFAKVDRDWLEPLFDALADNADMLVRGEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|325293588|ref|YP_004279452.1| Peptidyl-tRNA hydrolase [Agrobacterium sp. H13-3]
gi|325061441|gb|ADY65132.1| Peptidyl-tRNA hydrolase [Agrobacterium sp. H13-3]
Length = 238
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 126/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D + F W +KF AEISEG++ G + +L+K
Sbjct: 1 MKIIAGLGNPGAQYAGNRHNIGFMTVDALQRLPSFSPWARKFKAEISEGEIGGEKVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ E M F+KL + +VIHD+LDL G R+KTGGG GHNGLKSI
Sbjct: 61 PLTYMNLSGESVGEAMRFFKLAP-ADIIVIHDELDLLAGRARIKTGGGHGGHNGLKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P D + HVLG+F+ +R +L P++D IA + +L K ED
Sbjct: 120 HCGKEYRRLRLGIGHPGDKERVHGHVLGDFAKTDRVWLDPLLDAIADNAAMLVKSEDSQL 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNKLA 184
>gi|15966108|ref|NP_386461.1| peptidyl-tRNA hydrolase [Sinorhizobium meliloti 1021]
gi|307305662|ref|ZP_07585409.1| peptidyl-tRNA hydrolase [Sinorhizobium meliloti BL225C]
gi|307317665|ref|ZP_07597104.1| peptidyl-tRNA hydrolase [Sinorhizobium meliloti AK83]
gi|21263853|sp|Q92N67|PTH_RHIME RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|15075378|emb|CAC46934.1| Probable peptidyl-tRNA hydrolase [Sinorhizobium meliloti 1021]
gi|306896823|gb|EFN27570.1| peptidyl-tRNA hydrolase [Sinorhizobium meliloti AK83]
gi|306902365|gb|EFN32961.1| peptidyl-tRNA hydrolase [Sinorhizobium meliloti BL225C]
Length = 239
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 128/185 (69%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D I F AW +KF +E+SEG++DG R +L+K
Sbjct: 1 MLIIAGLGNPGPKYAGNRHNIGFMAVDAIQRRQGFSAWSRKFKSEVSEGEIDGERVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG++L + M FYKL ++ +VI+D+LDL G R+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGEALGDAMRFYKLAP-KDIVVIYDELDLPAGKARIKTGGGHGGHNGIKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P + HVLG+F+ ++ +L +++ IA + +L K ED
Sbjct: 120 HCGKEYRRLRLGIGHPGVKDLVHAHVLGDFAKADQAWLSLLLEAIADNAAMLVKGEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|190892771|ref|YP_001979313.1| peptidyl-tRNA hydrolase protein [Rhizobium etli CIAT 652]
gi|238692515|sp|B3PV10|PTH_RHIE6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|190698050|gb|ACE92135.1| peptidyl-tRNA hydrolase protein [Rhizobium etli CIAT 652]
Length = 243
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 125/185 (67%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH F W KKF AEI+EG+L G + +LIK
Sbjct: 1 MLIIAGLGNPGAKYAGNRHNIGFMAVDAIHRRQSFSPWSKKFKAEIAEGELGGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E M FYKL + + I+D+LDL G RLKTGGG GHNG++S+
Sbjct: 61 PQTYMNLSGEAVGEAMRFYKL-QPADLVAIYDELDLSPGKARLKTGGGHGGHNGIRSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P + HVLG+F+ + +L P+++ +A + +L + ED
Sbjct: 120 HCGKEYRRLRLGIGHPGIKEMVQNHVLGDFAKADSDWLEPLLETLADNAEMLVRNEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|240850145|ref|YP_002971538.1| peptidyl-tRNA hydrolase [Bartonella grahamii as4aup]
gi|240267268|gb|ACS50856.1| peptidyl-tRNA hydrolase [Bartonella grahamii as4aup]
Length = 193
Score = 177 bits (449), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 132/189 (69%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y NRHNIGFM +D I+ F W KKF AEIS G ++ + LIK
Sbjct: 1 MWLIAGLGNPGLQYQNNRHNIGFMAVDAIYQSFSFSPWSKKFQAEISNGFINNEKIFLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ E + FYKL +L+N ++I+D+LDL G +R+K GGG+ GHNG+KSI
Sbjct: 61 PQTFMNLSGQAIGEALRFYKL-DLKNLIIIYDELDLSPGKVRIKIGGGNNGHNGIKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG NY R+RIGIG P + +HVLGNF+ ++ +L P+++ IA+++ LL K + F
Sbjct: 120 HCGTNYCRIRIGIGHPGSKELVHQHVLGNFAKSDQEWLSPLLETIAKNIALLIKDDKSLF 179
Query: 181 LNHIVSVRK 189
+N I K
Sbjct: 180 MNEISQTIK 188
>gi|149203916|ref|ZP_01880884.1| peptidyl-tRNA hydrolase [Roseovarius sp. TM1035]
gi|149142358|gb|EDM30403.1| peptidyl-tRNA hydrolase [Roseovarius sp. TM1035]
Length = 226
Score = 177 bits (448), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 118/187 (63%), Gaps = 1/187 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +DRI H F W+ KF +SEG LDG RT+L+K
Sbjct: 1 MQLFVGLGNPGAKYERNRHNIGFMALDRIAEDHGFGPWRSKFQGMVSEGTLDGARTVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E + FYKL + V HD+LDL G LR KTGGG AGHNGL+SI +
Sbjct: 61 PMTFMNLSGQSVGEAVRFYKLIP-ADVTVFHDELDLAPGKLRCKTGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+GIG P + ++VL +F+ E +L ++ I + P LA+ + F
Sbjct: 120 HIGEAYARVRLGIGHPGHKDRVAQYVLQDFAKSEADWLDDLLRGIGKGAPWLAQGKPDRF 179
Query: 181 LNHIVSV 187
N +
Sbjct: 180 QNAVAQA 186
>gi|188581654|ref|YP_001925099.1| peptidyl-tRNA hydrolase [Methylobacterium populi BJ001]
gi|238692873|sp|B1Z9F8|PTH_METPB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|179345152|gb|ACB80564.1| Aminoacyl-tRNA hydrolase [Methylobacterium populi BJ001]
Length = 210
Score = 177 bits (448), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 119/184 (64%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NRHNIGFM +D I H ++++F E +E L R IL+K
Sbjct: 1 MRLIVGLGNPGQRYARNRHNIGFMAVDEIARVHRAAPFRRRFQGEAAEVMLGSERAILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ E F+K+P L + +V+HD+LDL LR+K GGG+AGHNGL+SI+
Sbjct: 61 PQTFMNESGRSVGEAQRFFKIP-LSDVIVLHDELDLAPAKLRVKLGGGNAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG +Y+R+R+GIG P D A + +VL +F+ E ++ + A PLLA ED SF
Sbjct: 120 LCGNDYRRVRLGIGHPGDKALVHAYVLNDFAKSEEPWVEDLCRATADHAPLLAAGEDASF 179
Query: 181 LNHI 184
N +
Sbjct: 180 QNKV 183
>gi|163851897|ref|YP_001639940.1| aminoacyl-tRNA hydrolase [Methylobacterium extorquens PA1]
gi|218530648|ref|YP_002421464.1| peptidyl-tRNA hydrolase [Methylobacterium chloromethanicum CM4]
gi|240139020|ref|YP_002963495.1| Peptidyl-tRNA hydrolase (PTH) [Methylobacterium extorquens AM1]
gi|254561615|ref|YP_003068710.1| peptidyl-tRNA hydrolase [Methylobacterium extorquens DM4]
gi|238687354|sp|A9W5L3|PTH_METEP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783876|sp|B7KNU7|PTH_METC4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|163663502|gb|ABY30869.1| Aminoacyl-tRNA hydrolase [Methylobacterium extorquens PA1]
gi|218522951|gb|ACK83536.1| Aminoacyl-tRNA hydrolase [Methylobacterium chloromethanicum CM4]
gi|240008992|gb|ACS40218.1| Peptidyl-tRNA hydrolase (PTH) [Methylobacterium extorquens AM1]
gi|254268893|emb|CAX24854.1| Peptidyl-tRNA hydrolase (PTH) [Methylobacterium extorquens DM4]
Length = 210
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 118/184 (64%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NRHNIGFM +D I H ++++F E +E L R IL+K
Sbjct: 1 MRLIVGLGNPGARYARNRHNIGFMAVDEIARVHRAAPFRRRFQGEAAEVMLGSERAILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ E F+K+P L + +V+HD+LDL LR+K GGG+AGHNGL+SI+
Sbjct: 61 PQTFMNESGRSVGEAQRFFKIP-LADVIVLHDELDLAPAKLRVKLGGGNAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG Y+R+R+GIG P D A + +VL +F+ E ++ + A PLLA ED SF
Sbjct: 120 LCGNEYRRVRLGIGHPGDKALVHAYVLNDFAKSEEPWVEDLCRATADHAPLLAAGEDASF 179
Query: 181 LNHI 184
N +
Sbjct: 180 QNKV 183
>gi|255263630|ref|ZP_05342972.1| peptidyl-tRNA hydrolase [Thalassiobium sp. R2A62]
gi|255105965|gb|EET48639.1| peptidyl-tRNA hydrolase [Thalassiobium sp. R2A62]
Length = 224
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D+I S H F W+ KF +SEG LDG + IL+K
Sbjct: 1 MKLFVGLGNPGAKYAHNRHNIGFMAMDQIASDHGFAPWRGKFQGSVSEGTLDGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M FYKL ++ V HD+LDL G LR+KT GG AGHNGL+SI +
Sbjct: 61 PETFMNLSGQSVGEAMRFYKL-TCDDVTVFHDELDLAPGKLRVKTAGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y R+R+GIG P + +VL +F+ E +L ++ + P LA+ + F
Sbjct: 120 HITPEYHRVRMGIGHPGHKDAVAGYVLRDFAKAEAGWLDDVLRGVGDGAPELARGDSGKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|294678567|ref|YP_003579182.1| aminoacyl-tRNA hydrolase [Rhodobacter capsulatus SB 1003]
gi|294477387|gb|ADE86775.1| aminoacyl-tRNA hydrolase [Rhodobacter capsulatus SB 1003]
Length = 229
Score = 174 bits (442), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +DRI + H F WKK F +SEG+ R IL+K
Sbjct: 1 MQLWVGLGNPGTKYAANRHNIGFMAVDRIAADHGFAPWKKAFQGHVSEGRFGSTRVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ +FYK+P +E V HD+LDL G LRLK GGG AGHNGL+SI +
Sbjct: 61 PETFMNLSGQSVRAAADFYKIP-VEAITVFHDELDLAPGKLRLKQGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+GIG P D + +VL +F+ E +L ++ ++ LA + F
Sbjct: 120 HMGEAYARVRLGIGHPGDKDRVAGYVLSDFAKAEAAWLDDLMRGLSDGAAALAAGDGAKF 179
Query: 181 LNHIV 185
LN +
Sbjct: 180 LNAVA 184
>gi|222149338|ref|YP_002550295.1| peptidyl-tRNA hydrolase [Agrobacterium vitis S4]
gi|254783846|sp|B9JZ39|PTH_AGRVS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|221736322|gb|ACM37285.1| peptidyl-tRNA hydrolase [Agrobacterium vitis S4]
Length = 234
Score = 174 bits (442), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 125/185 (67%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM +D IH H F W KKF AEI++G L G + +LIK
Sbjct: 1 MIVLAGLGNPGSQYAGNRHNIGFMALDAIHRRHSFSPWSKKFKAEIADGTLAGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E + FYKL E + I+D+LDL G R+K GGG GHNG+KS+
Sbjct: 61 PQTFMNLSGESVGEALRFYKL-GPEQLVAIYDELDLLPGKARIKLGGGHGGHNGIKSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG NY+RLR+GIG P D + + HVLG+F + +L P+++ +A + +L + ED
Sbjct: 120 HCGLNYRRLRLGIGHPGDKSRVQAHVLGDFGKLDAEWLDPLLETLAENADMLVRGEDSQL 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNKLA 184
>gi|149916126|ref|ZP_01904648.1| peptidyl-tRNA hydrolase [Roseobacter sp. AzwK-3b]
gi|149809981|gb|EDM69830.1| peptidyl-tRNA hydrolase [Roseobacter sp. AzwK-3b]
Length = 237
Score = 174 bits (442), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM IDRI H F WK KF EI+EGQL G + +L+K
Sbjct: 6 MLLFVGLGNPGAKYAGNRHNIGFMAIDRIAKDHGFGPWKGKFQGEIAEGQLGGQKVMLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E M FYKL + V HD+LDL G +R+K GGG AGHNG++SI +
Sbjct: 66 PGTFMNLSGQSVGEAMRFYKL-EPGDVTVFHDELDLAPGKVRVKIGGGHAGHNGMRSIHQ 124
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y+R+R+GIG P + ++VL +F+ + +L ++ I+ LA F
Sbjct: 125 HVGEAYQRVRLGIGHPGRKELVAQYVLQDFAKADADWLDDLMRGISDGAAELAAGRKDRF 184
Query: 181 LNHIVS 186
LN I
Sbjct: 185 LNAIAQ 190
>gi|159185111|ref|NP_355187.2| peptidyl-tRNA hydrolase [Agrobacterium tumefaciens str. C58]
gi|22095994|sp|Q8UD97|PTH_AGRT5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|159140382|gb|AAK87972.2| peptidyl tRNA hydrolase [Agrobacterium tumefaciens str. C58]
Length = 238
Score = 174 bits (441), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 124/185 (67%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D + F W KKF AEISEG++ G + +L+K
Sbjct: 1 MKIIAGLGNPGAQYAGNRHNIGFMAVDALQRLPSFAPWSKKFKAEISEGEIGGEKVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ E M F+KL + + IHD+LDL G R+K GGG GHNGLKS+
Sbjct: 61 PLTYMNLSGESVGEAMRFFKL-TPADIIAIHDELDLLAGRTRIKIGGGHGGHNGLKSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P D + HVLG+F+ +R +L P++D IA + +L K +D
Sbjct: 120 HCGKEYRRLRLGIGHPGDKERVHGHVLGDFAKSDRVWLDPLLDAIADNAAMLVKGDDSQL 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNKLA 184
>gi|254475939|ref|ZP_05089325.1| peptidyl-tRNA hydrolase [Ruegeria sp. R11]
gi|214030182|gb|EEB71017.1| peptidyl-tRNA hydrolase [Ruegeria sp. R11]
Length = 236
Score = 174 bits (441), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D+I H F WK KF A++SEG L G + +L+K
Sbjct: 1 MKLFVGLGNPGAKYAGNRHNIGFMALDQIADDHGFSPWKSKFQAQLSEGVLGGEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + +V+HD+LDL G R+K GGG AGHNGL+SI
Sbjct: 61 PQTFMNLSGQSVGEAMRFYKL-TPADVIVLHDELDLAPGKARVKQGGGHAGHNGLRSIHS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+GIG P + +VL +F+ + +L ++ I+ LAK + F
Sbjct: 120 HIGADYGRVRLGIGHPGHKDAVAGYVLRDFAKADEVWLDDLLRGISDGAASLAKGDGGKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|163867940|ref|YP_001609144.1| peptidyl-tRNA hydrolase [Bartonella tribocorum CIP 105476]
gi|189038279|sp|A9IR82|PTH_BART1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|161017591|emb|CAK01149.1| Peptidyl-tRNA hydrolase [Bartonella tribocorum CIP 105476]
Length = 193
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 132/189 (69%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y NRHNIGFM +D ++ F W KKF AEIS G ++ + LIK
Sbjct: 1 MWLIAGLGNPGSQYRNNRHNIGFMAVDAVYQSFSFSPWSKKFQAEISNGFINNEKVFLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ E + FYKL +L+N ++I+D+LDL G +R+K GGG+ GHNG+KSI
Sbjct: 61 PQTFMNLSGQAIGEALRFYKL-DLKNLIIIYDELDLSPGRVRIKIGGGNNGHNGIKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG +Y R+RIGIG P + +HVLGNF+ ++ +L P++D +A+++ LL K + F
Sbjct: 120 HCGTDYCRIRIGIGHPGSKELVHQHVLGNFTKFDQEWLSPLLDALAKNIALLIKGDKSLF 179
Query: 181 LNHIVSVRK 189
+N + K
Sbjct: 180 MNEVSQTIK 188
>gi|218515581|ref|ZP_03512421.1| peptidyl-tRNA hydrolase [Rhizobium etli 8C-3]
Length = 176
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 123/177 (69%), Gaps = 1/177 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH F W KKF AEI+EG+L G + +LIK
Sbjct: 1 MLIIAGLGNPGAKYAGNRHNIGFMAVDAIHRRQSFSPWSKKFKAEIAEGELGGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E M FYKL + + I+D+LDL G RLKTGGG GHNG++S+
Sbjct: 61 PQTYMNLSGEAVGEAMRFYKL-QPADLVAIYDELDLSPGKARLKTGGGHGGHNGIRSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
CGK Y+RLR+GIG P + HVLG+F+ + +L P+++ +A + +L ++ED
Sbjct: 120 HCGKEYRRLRLGIGHPGIKEMVQNHVLGDFAKADSDWLEPLLETLADNAEMLVRKED 176
>gi|86136041|ref|ZP_01054620.1| peptidyl-tRNA hydrolase [Roseobacter sp. MED193]
gi|85826915|gb|EAQ47111.1| peptidyl-tRNA hydrolase [Roseobacter sp. MED193]
Length = 248
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 121/188 (64%), Gaps = 2/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +D I S H F WK KF A+I EG L G++ +L+K
Sbjct: 1 MKLLVGLGNPGAKYARNRHNIGFMALDEIASDHGFSPWKTKFQAQICEGTLGGVKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + ++ V+HD+LDL G R+K GGG AGHNGL+S+
Sbjct: 61 PQTFMNLSGQSVGEAMRFYKLTS-QDVTVLHDELDLAPGKCRVKQGGGHAGHNGLRSLHS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F + +L ++ I+ LA + F
Sbjct: 120 HIGADYGRVRLGVGHPGHKDAVAGYVLRDFPKADEAWLDDLLRGISDGAVALAAGDSGKF 179
Query: 181 LNHIVSVR 188
+N VS+R
Sbjct: 180 MN-AVSLR 186
>gi|254719570|ref|ZP_05181381.1| peptidyl-tRNA hydrolase [Brucella sp. 83/13]
gi|265984578|ref|ZP_06097313.1| peptidyl-tRNA hydrolase [Brucella sp. 83/13]
gi|264663170|gb|EEZ33431.1| peptidyl-tRNA hydrolase [Brucella sp. 83/13]
Length = 250
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 131/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +L+K
Sbjct: 1 MLLIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-- 118
PQTFMNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKL-TPADLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDA 119
Query: 119 ---SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
S G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+R
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLLSAVADNVAMLARR 179
Query: 176 EDVSFLNHIV 185
ED SF+N I
Sbjct: 180 EDNSFMNRIA 189
>gi|83951129|ref|ZP_00959862.1| peptidyl-tRNA hydrolase [Roseovarius nubinhibens ISM]
gi|83839028|gb|EAP78324.1| peptidyl-tRNA hydrolase [Roseovarius nubinhibens ISM]
Length = 231
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 120/185 (64%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I AGLGNPG +Y NRHNIGFM +DRI H F WK +F + SEG+L + +L+K
Sbjct: 4 MLIFAGLGNPGAKYAGNRHNIGFMALDRIAEDHGFGPWKSRFQGQASEGRLGSEKLLLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M FYKL + +V HD+LDL G +R+K GGG AGHNGL+SI +
Sbjct: 64 PETFMNLSGQSVGEAMRFYKL-TPADVIVFHDELDLAPGKIRVKQGGGHAGHNGLRSIHQ 122
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+GIG P + ++VL +F+ ++ +L ++ I+ LA ++ F
Sbjct: 123 HIGPDYARVRLGIGHPGRKELVAQYVLHDFARADQDWLDDLMRGISDGAKSLAAGDNSKF 182
Query: 181 LNHIV 185
LN +
Sbjct: 183 LNAVA 187
>gi|306844536|ref|ZP_07477125.1| peptidyl-tRNA hydrolase [Brucella sp. BO1]
gi|306275147|gb|EFM56903.1| peptidyl-tRNA hydrolase [Brucella sp. BO1]
Length = 250
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 131/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +L+K
Sbjct: 1 MLLIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-- 118
PQTFMNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKL-TPADLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDA 119
Query: 119 ---SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
S G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+R
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLLGAVADNVAMLARR 179
Query: 176 EDVSFLNHIV 185
ED SF+N I
Sbjct: 180 EDNSFMNRIA 189
>gi|256061589|ref|ZP_05451730.1| peptidyl-tRNA hydrolase [Brucella neotomae 5K33]
gi|261325596|ref|ZP_05964793.1| peptidyl-tRNA hydrolase [Brucella neotomae 5K33]
gi|261301576|gb|EEY05073.1| peptidyl-tRNA hydrolase [Brucella neotomae 5K33]
Length = 250
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 131/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +L+K
Sbjct: 1 MLLIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-- 118
PQTFMNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKL-TPADLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDA 119
Query: 119 ---SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
S G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+R
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLMGAVADNVAMLARR 179
Query: 176 EDVSFLNHIV 185
ED SF+N I
Sbjct: 180 EDNSFMNRIA 189
>gi|163739060|ref|ZP_02146473.1| peptidyl-tRNA hydrolase [Phaeobacter gallaeciensis BS107]
gi|161387865|gb|EDQ12221.1| peptidyl-tRNA hydrolase [Phaeobacter gallaeciensis BS107]
Length = 252
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/185 (47%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D+I S H F WK KF A+ISEG L + +L+K
Sbjct: 1 MKLFVGLGNPGAKYAGNRHNIGFMALDQIASDHGFSPWKSKFQAQISEGVLGRTKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + V+HD+LDL G R+K GGG AGHNGL+SI
Sbjct: 61 PQTFMNLSGQSVGEAMRFYKL-TPADVTVLHDELDLAPGKARVKQGGGHAGHNGLRSIHS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+GIG P + +VL +F+ + +L ++ I+ LA + F
Sbjct: 120 HIGADYGRVRLGIGHPGHKDAVAGYVLRDFAKADEAWLDDLMRGISDGAAQLAAGDGGKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|163843792|ref|YP_001628196.1| peptidyl-tRNA hydrolase [Brucella suis ATCC 23445]
gi|189038281|sp|B0CHX5|PTH_BRUSI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|163674515|gb|ABY38626.1| peptidyl-tRNA hydrolase [Brucella suis ATCC 23445]
Length = 250
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 131/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +L+K
Sbjct: 1 MLLIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-- 118
PQTFMNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKL-TPADLVVIYDELDLVPGKLRIKTGGGPGGHNGIKSIDA 119
Query: 119 ---SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
S G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+R
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLMGAVADNVAMLARR 179
Query: 176 EDVSFLNHIV 185
ED SF+N I
Sbjct: 180 EDNSFMNRIA 189
>gi|17986763|ref|NP_539397.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 1 str. 16M]
gi|23502404|ref|NP_698531.1| peptidyl-tRNA hydrolase [Brucella suis 1330]
gi|148558902|ref|YP_001259413.1| peptidyl-tRNA hydrolase [Brucella ovis ATCC 25840]
gi|161619481|ref|YP_001593368.1| peptidyl-tRNA hydrolase [Brucella canis ATCC 23365]
gi|225627978|ref|ZP_03786014.1| peptidyl-tRNA hydrolase [Brucella ceti str. Cudo]
gi|225853015|ref|YP_002733248.1| peptidyl-tRNA hydrolase [Brucella melitensis ATCC 23457]
gi|254694212|ref|ZP_05156040.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 3 str. Tulya]
gi|254702255|ref|ZP_05164083.1| peptidyl-tRNA hydrolase [Brucella suis bv. 5 str. 513]
gi|254704789|ref|ZP_05166617.1| peptidyl-tRNA hydrolase [Brucella suis bv. 3 str. 686]
gi|254708203|ref|ZP_05170031.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis M163/99/10]
gi|254710572|ref|ZP_05172383.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis B2/94]
gi|254714755|ref|ZP_05176566.1| peptidyl-tRNA hydrolase [Brucella ceti M644/93/1]
gi|254717817|ref|ZP_05179628.1| peptidyl-tRNA hydrolase [Brucella ceti M13/05/1]
gi|256032067|ref|ZP_05445681.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis M292/94/1]
gi|256045158|ref|ZP_05448057.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 1 str. Rev.1]
gi|256160263|ref|ZP_05457957.1| peptidyl-tRNA hydrolase [Brucella ceti M490/95/1]
gi|256255469|ref|ZP_05461005.1| peptidyl-tRNA hydrolase [Brucella ceti B1/94]
gi|256263505|ref|ZP_05466037.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 2 str. 63/9]
gi|256369952|ref|YP_003107463.1| peptidyl-tRNA hydrolase [Brucella microti CCM 4915]
gi|260169202|ref|ZP_05756013.1| peptidyl-tRNA hydrolase [Brucella sp. F5/99]
gi|260565242|ref|ZP_05835726.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 1 str. 16M]
gi|260565968|ref|ZP_05836438.1| peptidyl-tRNA hydrolase [Brucella suis bv. 4 str. 40]
gi|261214518|ref|ZP_05928799.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 3 str. Tulya]
gi|261219663|ref|ZP_05933944.1| peptidyl-tRNA hydrolase [Brucella ceti M13/05/1]
gi|261222674|ref|ZP_05936955.1| peptidyl-tRNA hydrolase [Brucella ceti B1/94]
gi|261315707|ref|ZP_05954904.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis M163/99/10]
gi|261318145|ref|ZP_05957342.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis B2/94]
gi|261322552|ref|ZP_05961749.1| peptidyl-tRNA hydrolase [Brucella ceti M644/93/1]
gi|261752825|ref|ZP_05996534.1| peptidyl-tRNA hydrolase [Brucella suis bv. 5 str. 513]
gi|261755483|ref|ZP_05999192.1| peptidyl-tRNA hydrolase [Brucella suis bv. 3 str. 686]
gi|261758714|ref|ZP_06002423.1| peptidyl-tRNA hydrolase [Brucella sp. F5/99]
gi|265989176|ref|ZP_06101733.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis M292/94/1]
gi|265991590|ref|ZP_06104147.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 1 str. Rev.1]
gi|265998638|ref|ZP_06111195.1| peptidyl-tRNA hydrolase [Brucella ceti M490/95/1]
gi|54038904|sp|P65864|PTH_BRUSU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54041590|sp|P65863|PTH_BRUME RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199311|sp|A5VRR6|PTH_BRUO2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038280|sp|A9M6K1|PTH_BRUC2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783856|sp|C0REH2|PTH_BRUMB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|17982391|gb|AAL51661.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 1 str. 16M]
gi|23348390|gb|AAN30446.1| peptidyl-tRNA hydrolase [Brucella suis 1330]
gi|148370159|gb|ABQ60138.1| peptidyl-tRNA hydrolase [Brucella ovis ATCC 25840]
gi|161336292|gb|ABX62597.1| peptidyl-tRNA hydrolase [Brucella canis ATCC 23365]
gi|225617141|gb|EEH14187.1| peptidyl-tRNA hydrolase [Brucella ceti str. Cudo]
gi|225641380|gb|ACO01294.1| peptidyl-tRNA hydrolase [Brucella melitensis ATCC 23457]
gi|256000115|gb|ACU48514.1| peptidyl-tRNA hydrolase [Brucella microti CCM 4915]
gi|260151310|gb|EEW86404.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 1 str. 16M]
gi|260155486|gb|EEW90566.1| peptidyl-tRNA hydrolase [Brucella suis bv. 4 str. 40]
gi|260916125|gb|EEX82986.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 3 str. Tulya]
gi|260921258|gb|EEX87911.1| peptidyl-tRNA hydrolase [Brucella ceti B1/94]
gi|260924752|gb|EEX91320.1| peptidyl-tRNA hydrolase [Brucella ceti M13/05/1]
gi|261295242|gb|EEX98738.1| peptidyl-tRNA hydrolase [Brucella ceti M644/93/1]
gi|261297368|gb|EEY00865.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis B2/94]
gi|261304733|gb|EEY08230.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis M163/99/10]
gi|261738698|gb|EEY26694.1| peptidyl-tRNA hydrolase [Brucella sp. F5/99]
gi|261742578|gb|EEY30504.1| peptidyl-tRNA hydrolase [Brucella suis bv. 5 str. 513]
gi|261745236|gb|EEY33162.1| peptidyl-tRNA hydrolase [Brucella suis bv. 3 str. 686]
gi|262553262|gb|EEZ09096.1| peptidyl-tRNA hydrolase [Brucella ceti M490/95/1]
gi|263002374|gb|EEZ14949.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 1 str. Rev.1]
gi|263093527|gb|EEZ17561.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 2 str. 63/9]
gi|264661373|gb|EEZ31634.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis M292/94/1]
gi|326409554|gb|ADZ66619.1| peptidyl-tRNA hydrolase [Brucella melitensis M28]
gi|326539260|gb|ADZ87475.1| peptidyl-tRNA hydrolase [Brucella melitensis M5-90]
Length = 250
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 131/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +L+K
Sbjct: 1 MLLIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-- 118
PQTFMNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKL-TPADLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDA 119
Query: 119 ---SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
S G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+R
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLMGAVADNVAMLARR 179
Query: 176 EDVSFLNHIV 185
ED SF+N I
Sbjct: 180 EDNSFMNRIA 189
>gi|126727671|ref|ZP_01743503.1| peptidyl-tRNA hydrolase [Rhodobacterales bacterium HTCC2150]
gi|126703087|gb|EBA02188.1| peptidyl-tRNA hydrolase [Rhodobacterales bacterium HTCC2150]
Length = 229
Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 115/182 (63%), Gaps = 1/182 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I AGLGNPG +Y NRHNIGFM +D I H F W+ KF AEIS+G+L G + +LIK
Sbjct: 1 MIIFAGLGNPGTKYANNRHNIGFMVLDEIAHAHSFSQWRSKFQAEISDGKLAGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E M FYK + + V HD++DL +R+K GGG AGHNGL+SI +
Sbjct: 61 PMTFMNLSGQSIGEAMRFYKC-DSTDVTVFHDEIDLAPAKVRVKDGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F+ ++ +L +I P LA + F
Sbjct: 120 HIGPHYGRVRLGVGHPGHKDRVPGYVLSDFAKADQTWLDDVIRGCGEGAPELAAGDAPKF 179
Query: 181 LN 182
+N
Sbjct: 180 MN 181
>gi|62290421|ref|YP_222214.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 1 str. 9-941]
gi|82700344|ref|YP_414918.1| peptidyl-tRNA hydrolase [Brucella melitensis biovar Abortus 2308]
gi|237815929|ref|ZP_04594926.1| peptidyl-tRNA hydrolase [Brucella abortus str. 2308 A]
gi|254689722|ref|ZP_05152976.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 6 str. 870]
gi|254697866|ref|ZP_05159694.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 2 str. 86/8/59]
gi|254730756|ref|ZP_05189334.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 4 str. 292]
gi|256257974|ref|ZP_05463510.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 9 str. C68]
gi|260546957|ref|ZP_05822696.1| peptidyl-tRNA hydrolase [Brucella abortus NCTC 8038]
gi|260755254|ref|ZP_05867602.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 6 str. 870]
gi|260758475|ref|ZP_05870823.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 4 str. 292]
gi|260762300|ref|ZP_05874643.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 2 str. 86/8/59]
gi|260884269|ref|ZP_05895883.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 9 str. C68]
gi|297248807|ref|ZP_06932525.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 5 str. B3196]
gi|30913141|sp|Q9AEQ5|PTH_BRUAB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390916|sp|Q2YLX5|PTH_BRUA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|13591431|gb|AAK29776.1| peptidyl tRNA hydrolase [Brucella abortus]
gi|62196553|gb|AAX74853.1| Pth, peptidyl-tRNA hydrolase [Brucella abortus bv. 1 str. 9-941]
gi|82616445|emb|CAJ11508.1| Peptidyl-tRNA hydrolase [Brucella melitensis biovar Abortus 2308]
gi|237789227|gb|EEP63438.1| peptidyl-tRNA hydrolase [Brucella abortus str. 2308 A]
gi|260096007|gb|EEW79884.1| peptidyl-tRNA hydrolase [Brucella abortus NCTC 8038]
gi|260668793|gb|EEX55733.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 4 str. 292]
gi|260672732|gb|EEX59553.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 2 str. 86/8/59]
gi|260675362|gb|EEX62183.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 6 str. 870]
gi|260873797|gb|EEX80866.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 9 str. C68]
gi|297175976|gb|EFH35323.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 5 str. B3196]
Length = 250
Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 131/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +L+K
Sbjct: 1 MLLIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-- 118
PQTFMNLSGQS+ E M FYK+ + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKM-TPADLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDA 119
Query: 119 ---SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
S G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+R
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLMGAVADNVAMLARR 179
Query: 176 EDVSFLNHIV 185
ED SF+N I
Sbjct: 180 EDNSFMNRIA 189
>gi|217977795|ref|YP_002361942.1| peptidyl-tRNA hydrolase [Methylocella silvestris BL2]
gi|254783878|sp|B8EK40|PTH_METSB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|217503171|gb|ACK50580.1| Aminoacyl-tRNA hydrolase [Methylocella silvestris BL2]
Length = 196
Score = 171 bits (433), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 122/184 (66%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NRHNIGFM +D+I + P ++ KF+ ISE L G R +L+
Sbjct: 1 MILLVGLGNPGKAYAGNRHNIGFMALDQIARDYSAPPFRSKFNGLISEITLAGERCVLLA 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ E + K+ ++ +V+HD+LDL G +R+KTGGG+AGHNGLKSI+
Sbjct: 61 PQTYMNDSGRSVGEAARYLKI-EPKDIVVLHDELDLPAGKVRVKTGGGNAGHNGLKSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y+R+R+GIG P D A + +VLG+F+ E ++ + +A S PLLAK ED +F
Sbjct: 120 HIGNEYRRVRLGIGHPGDRALVHNYVLGDFAKSEAAWVEALCKAVAASAPLLAKGEDDAF 179
Query: 181 LNHI 184
I
Sbjct: 180 QTKI 183
>gi|227822862|ref|YP_002826834.1| peptidyl-tRNA hydrolase [Sinorhizobium fredii NGR234]
gi|254783883|sp|C3MFM4|PTH_RHISN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|227341863|gb|ACP26081.1| peptidyl-tRNA hydrolase [Sinorhizobium fredii NGR234]
Length = 239
Score = 171 bits (432), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 126/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D I F +W KKF AEI+EG++ G R +LIK
Sbjct: 1 MLIIAGLGNPGSKYAGNRHNIGFMAVDAIWQRQGFSSWSKKFKAEIAEGEIAGERVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+++ E M FYKL ++ +VI+D+LDL G R+K GGG GHNG+KSI
Sbjct: 61 PQTFMNLSGEAVGEAMRFYKLAP-KDIVVIYDELDLIAGKARIKIGGGHGGHNGIKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P + HVLG+F+ ++ +L ++D IA + +L K ED
Sbjct: 120 HCGKEYRRLRLGIGHPGVKDLVHAHVLGDFAKADQAWLSSLLDTIADNAGMLVKGEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|154252703|ref|YP_001413527.1| aminoacyl-tRNA hydrolase [Parvibaculum lavamentivorans DS-1]
gi|171769610|sp|A7HVD7|PTH_PARL1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|154156653|gb|ABS63870.1| Aminoacyl-tRNA hydrolase [Parvibaculum lavamentivorans DS-1]
Length = 205
Score = 171 bits (432), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 122/185 (65%), Gaps = 2/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM D I H F + +F +SEG LDG + I++K
Sbjct: 1 MILLVGLGNPGEKYARNRHNIGFMAADGIVRRHSFSPPRARFQGIVSEGTLDGEKVIVLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E M FYKL + +V +D+LDL+ G +R+KTGGG AGHNG++SI+
Sbjct: 61 PTTYMNESGRAVGEAMRFYKL-TPADVVVFYDELDLEPGKVRMKTGGGAAGHNGIRSIAA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERY-FLLPIIDNIARSLPLLAKREDVS 179
G ++R+RIGIG P ++ +VLG+FS E ++ +I+ IA + PLLA +D +
Sbjct: 120 HIGPEFRRVRIGIGHPGAKDRVLGYVLGDFSKAETADWVETLIEAIADAAPLLATGKDAT 179
Query: 180 FLNHI 184
F N +
Sbjct: 180 FANKV 184
>gi|254464216|ref|ZP_05077627.1| peptidyl-tRNA hydrolase [Rhodobacterales bacterium Y4I]
gi|206685124|gb|EDZ45606.1| peptidyl-tRNA hydrolase [Rhodobacterales bacterium Y4I]
Length = 235
Score = 170 bits (431), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D+I S H F WK KF A ISEG L G + +L+K
Sbjct: 9 MKLFVGLGNPGPKYERNRHNIGFMALDQIASDHGFSPWKSKFQALISEGTLGGEKVLLLK 68
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + +V+HD+LDL G R+K GGG AGHNGL+SI
Sbjct: 69 PQTFMNLSGQSVGEAMRFYKL-TPADVVVLHDELDLAPGKARMKQGGGHAGHNGLRSIHS 127
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+GIG P + +VL +F + +L ++ I+ LAK F
Sbjct: 128 HIGADYARVRLGIGHPGHKDAVAGYVLRDFPKTDEGWLDDLMRGISDGAAELAKGNGGKF 187
Query: 181 LNHIV 185
+N +
Sbjct: 188 MNAVA 192
>gi|294852854|ref|ZP_06793527.1| peptidyl-tRNA hydrolase [Brucella sp. NVSL 07-0026]
gi|294821443|gb|EFG38442.1| peptidyl-tRNA hydrolase [Brucella sp. NVSL 07-0026]
Length = 250
Score = 170 bits (431), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 130/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + L+K
Sbjct: 1 MLLIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVSLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-- 118
PQTFMNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKL-TPADLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDA 119
Query: 119 ---SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
S G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+R
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLMGAVADNVAMLARR 179
Query: 176 EDVSFLNHIV 185
ED SF+N I
Sbjct: 180 EDNSFMNRIA 189
>gi|241762454|ref|ZP_04760531.1| Aminoacyl-tRNA hydrolase [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241372956|gb|EER62623.1| Aminoacyl-tRNA hydrolase [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 189
Score = 170 bits (431), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I AGLGNPG Y NRHN+GFM +D + S F WK+ F +IS GQ+D R +L+K
Sbjct: 1 MQIWAGLGNPGSSYALNRHNVGFMAVDMLASERSFAPWKRAFQGQISLGQIDQERILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E M FYKL E+ V HD+LD+ +++K GGG AGHNGL+S
Sbjct: 61 PATFMNESGRAIGEAMRFYKL-TPEDVTVFHDELDIAPMRVKVKKGGGAAGHNGLRSTIA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G++++R+R+GIG P + + + +VLGNF+ E L +++ I +++P LA +D F
Sbjct: 120 HIGQSFRRVRLGIGHPGEKSRVHDYVLGNFAKSETDSLADMLNAINQAIPWLANDDDARF 179
Query: 181 LNHIVSVRK 189
++ I R+
Sbjct: 180 MSEIALRRQ 188
>gi|158425772|ref|YP_001527064.1| peptidyl-tRNA hydrolase [Azorhizobium caulinodans ORS 571]
gi|172047830|sp|A8HS70|PTH_AZOC5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|158332661|dbj|BAF90146.1| peptidyl-tRNA hydrolase [Azorhizobium caulinodans ORS 571]
Length = 204
Score = 170 bits (431), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 118/186 (63%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF+ AGLGNPG +Y NRHNIGFM +D I H W+++F +SEG++ G + + +
Sbjct: 1 MFLFAGLGNPGPKYAGNRHNIGFMAVDAIVRRHRLSPWRRRFQGAVSEGEIAGEKVLALL 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN SG+++ E FYK+P LEN V HD+LDL +R+K GGG+AGHNGL+SI+
Sbjct: 61 PETFMNESGRAVAEAAKFYKIP-LENIFVFHDELDLPPAKIRVKKGGGNAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL--AKREDV 178
+CG +Y R+R+GIG P D + + +VL +F ER ++ + A P L K ED
Sbjct: 120 QCGNDYWRVRLGIGHPGDKSLVHSYVLNDFGKAEREWVEAVNTACADFAPALIGGKAEDF 179
Query: 179 SFLNHI 184
H+
Sbjct: 180 QNRAHL 185
>gi|56552807|ref|YP_163646.1| peptidyl-tRNA hydrolase [Zymomonas mobilis subsp. mobilis ZM4]
gi|68052886|sp|Q5NL75|PTH_ZYMMO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56544381|gb|AAV90535.1| Aminoacyl-tRNA hydrolase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 189
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I AGLGNPG Y NRHN+GFM +D + S F WK+ F ++S GQ+D R +L+K
Sbjct: 1 MQIWAGLGNPGSSYALNRHNVGFMAVDMLASEKSFAPWKRAFQGQVSLGQIDQERILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E M FYKL E+ V HD+LD+ +++K GGG AGHNGL+S
Sbjct: 61 PATFMNESGRAIGEAMRFYKLAP-EDVTVFHDELDIAPMRVKVKKGGGAAGHNGLRSTIA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G++++R+R+GIG P + + + +VLGNF+ E L +++ I +++P LA +D F
Sbjct: 120 HIGQSFRRVRLGIGHPGEKSRVHDYVLGNFAKSETDSLADMLNAINQAIPWLANDDDARF 179
Query: 181 LNHIVSVRK 189
++ I R+
Sbjct: 180 MSEIALRRQ 188
>gi|119384009|ref|YP_915065.1| peptidyl-tRNA hydrolase [Paracoccus denitrificans PD1222]
gi|166229430|sp|A1B1H5|PTH_PARDP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119373776|gb|ABL69369.1| peptidyl-tRNA hydrolase [Paracoccus denitrificans PD1222]
Length = 235
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 120/182 (65%), Gaps = 1/182 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHN+GFM ++RI H F W+ +F EI+EG+L R L+K
Sbjct: 1 MKLIVGLGNPGAKYAANRHNVGFMAVERIAGDHGFSPWRARFQGEIAEGRLGETRVTLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E M + KL ++ +V+HD+LDL G +RLKTGGG AGHNGL+S+ +
Sbjct: 61 PATFMNLSGQSVGEAMRYLKLAP-QDVIVLHDELDLAPGKVRLKTGGGHAGHNGLRSLHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y+RLRIGIG P D + +VL +F+ E+ L ++ I+ LA +D F
Sbjct: 120 HIGEGYRRLRIGIGHPGDKDRVAGYVLSDFAKAEQAGLDDLLRGISDGAAALAAGDDARF 179
Query: 181 LN 182
+N
Sbjct: 180 MN 181
>gi|260753466|ref|YP_003226359.1| peptidyl-tRNA hydrolase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552829|gb|ACV75775.1| peptidyl-tRNA hydrolase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 189
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I AGLGNPG Y NRHN+GFM +D + S F WK+ F ++S GQ+D R +L+K
Sbjct: 1 MQIWAGLGNPGSSYALNRHNVGFMAVDMLASERSFAPWKRAFQGQVSLGQIDQERILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E M FYKL E+ V HD+LD+ +++K GGG AGHNGL+S
Sbjct: 61 PATFMNESGRAIGEAMRFYKLAP-EDVTVFHDELDIAPMRVKVKKGGGAAGHNGLRSTIA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G++++R+R+GIG P + + + +VLGNF+ E L +++ I +++P LA +D F
Sbjct: 120 HIGQSFRRVRLGIGHPGEKSRVHDYVLGNFAKSETDSLAGMLNAINQAIPWLANDDDARF 179
Query: 181 LNHIVSVRK 189
++ I R+
Sbjct: 180 MSEIALRRQ 188
>gi|239832419|ref|ZP_04680748.1| peptidyl-tRNA hydrolase [Ochrobactrum intermedium LMG 3301]
gi|239824686|gb|EEQ96254.1| peptidyl-tRNA hydrolase [Ochrobactrum intermedium LMG 3301]
Length = 254
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 131/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +LIK
Sbjct: 1 MLLIAGLGNPGPKYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-- 118
PQTFMNLSGQS+ E M FYKL + +VI+D+LDL+ G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSVGEAMRFYKL-TPADLVVIYDELDLNPGKLRIKTGGGSGGHNGIKSIDS 119
Query: 119 ---SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
S G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLLGAVADNVAMLARG 179
Query: 176 EDVSFLNHIV 185
ED SF+N +
Sbjct: 180 EDNSFMNRVA 189
>gi|319408910|emb|CBI82567.1| Peptidyl-tRNA hydrolase [Bartonella schoenbuchensis R1]
Length = 194
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 126/186 (67%), Gaps = 1/186 (0%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++AGLGNPG Y NRHNIGFM +D IH F W KKF AEIS G ++G + +LIKP
Sbjct: 1 MLIAGLGNPGLSYQNNRHNIGFMAVDAIHKSFSFSPWSKKFQAEISNGLINGEKILLIKP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSGQ++ + + FYKL L N++V +D+LDL G +R+K GGG GHNG+KSI
Sbjct: 61 QTFMNLSGQAISQTLRFYKL-ELNNFIVFYDELDLPPGKVRVKIGGGSGGHNGIKSIDSH 119
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
CG NY R+R+GIG P + +HVLGNF+ ++ +L ++D IA ++ +L K + F+
Sbjct: 120 CGNNYCRVRLGIGHPGSKELVHQHVLGNFTKSDQEWLPTLLDIIADNIAILIKGDANQFM 179
Query: 182 NHIVSV 187
N I V
Sbjct: 180 NKISLV 185
>gi|256114110|ref|ZP_05454864.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 3 str. Ether]
gi|265995428|ref|ZP_06107985.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 3 str. Ether]
gi|262766541|gb|EEZ12330.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 3 str. Ether]
Length = 250
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 130/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +L+K
Sbjct: 1 MLLIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-- 118
PQTFMNLSGQS+ E M FYKL + +VI+D+L L G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKL-TPADLVVIYDELALVPGKLRIKTGGGSGGHNGIKSIDA 119
Query: 119 ---SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
S G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+R
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLMGAVADNVAMLARR 179
Query: 176 EDVSFLNHIV 185
ED SF+N I
Sbjct: 180 EDNSFMNRIA 189
>gi|260427319|ref|ZP_05781298.1| peptidyl-tRNA hydrolase [Citreicella sp. SE45]
gi|260421811|gb|EEX15062.1| peptidyl-tRNA hydrolase [Citreicella sp. SE45]
Length = 226
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 119/185 (64%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I GLGNPG +Y +NRHNIGFM +DRI H F W+ +F E+SEG+L G + +L+K
Sbjct: 1 MQIFVGLGNPGGKYAKNRHNIGFMAVDRIAEDHGFGPWRTRFQGEVSEGRLGGEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSGQS+ E M F+KL + V+HD+LDL G R+K+GGG AGHNGL+SI +
Sbjct: 61 PGTYMNLSGQSVGEAMRFFKL-TPADVTVLHDELDLAPGKCRVKSGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y+R+R+GIG P + +VL +F+ + +L ++ I+ LA+ + F
Sbjct: 120 HIGEAYRRVRLGIGHPGRKELVAGYVLHDFAKADETWLDDLLRGISDGAKALAEGDASGF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNAVA 184
>gi|90418285|ref|ZP_01226197.1| peptidyl-tRNA hydrolase [Aurantimonas manganoxydans SI85-9A1]
gi|90337957|gb|EAS51608.1| peptidyl-tRNA hydrolase [Aurantimonas manganoxydans SI85-9A1]
Length = 244
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 126/185 (68%), Gaps = 2/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y NRHNIGFM ++ I F W KKF AEISEGQ+ G + +LIK
Sbjct: 1 MLLIAGLGNPGSRYAGNRHNIGFMALEEIARDPAFSPWSKKFSAEISEGQIGGEKVVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ + F+KL +VIHD+LDL G LR+KTGGG+ GHNGL+SI
Sbjct: 61 PQTFMNESGRSVGDAARFFKL-EPSQIVVIHDELDLPPGKLRVKTGGGNGGHNGLRSIDA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K+Y+R+R+GIG P + + +VLG+F+ +R +L P I+ +AR + LAK ED
Sbjct: 120 HLGTKDYRRVRMGIGHPGNKDAVSPYVLGDFAKVDREWLEPFIEAVARHVDSLAKGEDAM 179
Query: 180 FLNHI 184
F+N +
Sbjct: 180 FMNKV 184
>gi|86751267|ref|YP_487763.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris HaA2]
gi|119390991|sp|Q2ISF8|PTH_RHOP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86574295|gb|ABD08852.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris HaA2]
Length = 207
Score = 167 bits (424), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 118/184 (64%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +NRHNIGFM ID I H F W+++F E S+G LDG R L+K
Sbjct: 1 MRLFVGLGNPGTKYQDNRHNIGFMVIDEIARRHGFSPWRRRFQGETSDGALDGERITLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E +FYK+ E V HD+++L +R+K GGG AGHNGL+SIS
Sbjct: 61 PLTYMNESGRAVQEAASFYKIGQGE-VAVFHDEIELPPAKVRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + HVLG+F+ ER ++ + + A + L+AK +D SF
Sbjct: 120 HIGNDYLRVRLGVGHPGVKEMVHGHVLGDFAKSERPWVAALCEIAADNAGLIAKGKDASF 179
Query: 181 LNHI 184
N +
Sbjct: 180 ANKV 183
>gi|170750518|ref|YP_001756778.1| aminoacyl-tRNA hydrolase [Methylobacterium radiotolerans JCM 2831]
gi|238688884|sp|B1M1C0|PTH_METRJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|170657040|gb|ACB26095.1| Aminoacyl-tRNA hydrolase [Methylobacterium radiotolerans JCM 2831]
Length = 202
Score = 167 bits (423), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 121/188 (64%), Gaps = 9/188 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NRHNIGF+ +D I H ++ +F E +E L R IL+K
Sbjct: 1 MRLIVGLGNPGARYAGNRHNIGFLAVDAIARQHRASPFRHRFQGEAAEVVLGTERAILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E FYK+P L + +V+HD+LDL LR+K GGG+AGHNGL+SI+
Sbjct: 61 PSTFMNESGRAVSEAQRFYKIP-LADVIVLHDELDLAPAKLRVKRGGGNAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL----PLLAKRE 176
+CG +Y+R+R+GIG P D A + +VL +F E LP ++++ R++ LLA E
Sbjct: 120 QCGNDYRRVRLGIGHPGDKALVHAYVLNDFGKAE----LPWVEDLCRAVADHAALLAAGE 175
Query: 177 DVSFLNHI 184
D SF N +
Sbjct: 176 DASFQNKV 183
>gi|91978461|ref|YP_571120.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris BisB5]
gi|119390993|sp|Q131M0|PTH_RHOPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|91684917|gb|ABE41219.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris BisB5]
Length = 207
Score = 167 bits (423), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 120/184 (65%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +NRHNIGFM ID I H F W+++F E ++G LDG R L+K
Sbjct: 1 MRLFVGLGNPGSKYQDNRHNIGFMVIDEIARRHGFSPWRRRFQGETADGSLDGERITLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E ++FYK+ + E V HD+++L LR+K GGG AGHNGL+SIS
Sbjct: 61 PLTYMNESGRAVQEAVSFYKIGHGE-VAVFHDEIELPPAKLRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + HVLG+F+ ER ++ + + +A + L+AK + +F
Sbjct: 120 HIGNDYLRVRLGVGHPGVKELVHGHVLGDFAKSERPWVAALAEAVADNAGLIAKGREATF 179
Query: 181 LNHI 184
N +
Sbjct: 180 ANKV 183
>gi|146342828|ref|YP_001207876.1| peptidyl-tRNA hydrolase [Bradyrhizobium sp. ORS278]
gi|166199310|sp|A4Z0I5|PTH_BRASO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146195634|emb|CAL79661.1| peptidyl-tRNA hydrolase [Bradyrhizobium sp. ORS278]
Length = 201
Score = 167 bits (423), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 116/184 (63%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F W+++F E SEG LD R IL+K
Sbjct: 1 MLLFVGLGNPGAKYSRNRHNIGFMAVDEISRRHRFSPWRRRFQGETSEGTLDSERVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E +F+KL + + V D+L+L G LR+K GGG AGHNGL+SIS
Sbjct: 61 PTTYMNESGRAVQEAASFFKL-GVGDVTVFQDELELAPGKLRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+R+GIG P + HVL +F+ E ++ + + +A + LL + D +F
Sbjct: 120 HLGNDYRRVRLGIGHPGVKELVHGHVLSDFAKSEMPWVEALCEAVADNAELLTGKRDSTF 179
Query: 181 LNHI 184
N +
Sbjct: 180 ANKV 183
>gi|299134268|ref|ZP_07027461.1| peptidyl-tRNA hydrolase [Afipia sp. 1NLS2]
gi|298591015|gb|EFI51217.1| peptidyl-tRNA hydrolase [Afipia sp. 1NLS2]
Length = 201
Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 119/184 (64%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D + H F W+++F E SEG LDG R IL+K
Sbjct: 1 MRLFVGLGNPGSKYEGNRHNIGFMVLDEMARRHGFSPWRRRFQGETSEGVLDGERVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E NF+KL + +V HD+++L +R+K GGG AGHNGL+SIS
Sbjct: 61 PATYMNESGRAVQEAANFFKLGE-SDVVVFHDEIELPPAKVRVKVGGGIAGHNGLRSISS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G YKR+R+G+G P + HVL +F+ ER ++ + D ++ + LLA+ +D +F
Sbjct: 120 HVGNEYKRVRMGVGHPGVKELVHIHVLNDFAKAERPWVEALCDIVSDNAALLAQGKDSAF 179
Query: 181 LNHI 184
N +
Sbjct: 180 QNKV 183
>gi|298292448|ref|YP_003694387.1| peptidyl-tRNA hydrolase [Starkeya novella DSM 506]
gi|296928959|gb|ADH89768.1| peptidyl-tRNA hydrolase [Starkeya novella DSM 506]
Length = 203
Score = 167 bits (422), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 117/184 (63%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I F W+++F EG++DG++ + +
Sbjct: 1 MLLFVGLGNPGSKYAGNRHNIGFMAVDAIARRQRFSPWRRRFQGAACEGEIDGVKVLCLL 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MN SG+++ E FYK+ L++ LV HD+LDL +R+K GGG+AGHNGL+SI+
Sbjct: 61 PETYMNESGRAVAEAQRFYKI-ELKDILVFHDELDLPPAKVRVKIGGGNAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG +Y R+R+GIG P D A + +VL +F+ ER ++ + D A LLA + F
Sbjct: 120 HCGNDYPRIRLGIGHPGDKALVHNYVLSDFAKAERGWVEAVCDGCADFAGLLATQRLDEF 179
Query: 181 LNHI 184
N +
Sbjct: 180 QNRM 183
>gi|114707022|ref|ZP_01439921.1| peptidyl-tRNA hydrolase [Fulvimarina pelagi HTCC2506]
gi|114537572|gb|EAU40697.1| peptidyl-tRNA hydrolase [Fulvimarina pelagi HTCC2506]
Length = 241
Score = 167 bits (422), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 126/183 (68%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM +D I F W KKF EISEGQ+ G + +L+K
Sbjct: 1 MILIAGLGNPGPKYAGNRHNIGFMAVDEIARDPAFSPWSKKFSGEISEGQVGGEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E F+K+ ++ +V+HD+LDLD G +++KTGGG+ GHNGL+S
Sbjct: 61 PLTFMNDSGRSVGEAARFFKI-EPKDVIVVHDELDLDPGRVKVKTGGGNGGHNGLRSTDA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K+Y+R+R+GIG P + HVLG+FS +R +L P++ IAR+L L + ED S
Sbjct: 120 HLGTKDYRRMRLGIGHPGRKEAVTPHVLGDFSKADREWLQPLLTTIARNLEPLVRGEDAS 179
Query: 180 FLN 182
F+N
Sbjct: 180 FMN 182
>gi|114797549|ref|YP_760113.1| peptidyl-tRNA hydrolase [Hyphomonas neptunium ATCC 15444]
gi|119390950|sp|Q0C2D0|PTH_HYPNA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|114737723|gb|ABI75848.1| peptidyl-tRNA hydrolase [Hyphomonas neptunium ATCC 15444]
Length = 207
Score = 167 bits (422), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 123/191 (64%), Gaps = 5/191 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGL----RT 56
M I++G GNPG +Y +NRHN GF+ IDRIH + F W+ KF AEISEG ++ R
Sbjct: 1 MLILSGQGNPGAKYAKNRHNAGFLVIDRIHDAYGFGPWRTKFDAEISEGTVETANGRQRV 60
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+LIKPQTF N +G+S+ + + FYKL E+ V HD++DL G LR+K GGG +G+NG +
Sbjct: 61 LLIKPQTFYNETGRSVSKAVTFYKL-QPEDVTVFHDEIDLAPGRLRVKRGGGHSGNNGAR 119
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
S+ G+N++R+RIG+G P D A ++ HVL +F + + P+ + + ++LP L +
Sbjct: 120 SMMAHLGENFRRIRIGVGHPGDKAMVMPHVLSDFHKVDLEWFEPMTEAVCKALPFLLAGD 179
Query: 177 DVSFLNHIVSV 187
D F ++ +
Sbjct: 180 DERFQTEVMRL 190
>gi|126739657|ref|ZP_01755349.1| Aminoacyl-tRNA hydrolase [Roseobacter sp. SK209-2-6]
gi|126719303|gb|EBA16013.1| Aminoacyl-tRNA hydrolase [Roseobacter sp. SK209-2-6]
Length = 232
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 113/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +NRHNIGFM +D+I S H F WK KF EI EG L G + + +K
Sbjct: 1 MKLFVGLGNPGQKYAQNRHNIGFMALDQIASDHGFSPWKSKFQGEICEGNLTGNKVLSLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ E + FYKL + +V HD+LDL G R K GGG AGHNGL+SI
Sbjct: 61 PQTFMNLSGQAVGEAIRFYKL-TTADVVVFHDELDLAPGKCRFKQGGGHAGHNGLRSIHS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+GIG P + +VL +F + +L ++ I+ LA + F
Sbjct: 120 HIGADYARVRLGIGHPGHKDAVSGYVLRDFPKADANWLDDLLRGISDGAAQLAAGDSGKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|159043499|ref|YP_001532293.1| peptidyl-tRNA hydrolase [Dinoroseobacter shibae DFL 12]
gi|189038289|sp|A8LRY5|PTH_DINSH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157911259|gb|ABV92692.1| aminoacyl-tRNA hydrolase [Dinoroseobacter shibae DFL 12]
Length = 235
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 118/188 (62%), Gaps = 2/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D+I + H F W+ KF +++EG+ + L+K
Sbjct: 1 MKLFVGLGNPGPKYARNRHNIGFMALDQIAADHGFSPWRTKFSGQMAEGKFGSTKVTLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN SGQS+ E M F+KL E+ +V HD+LDL G R+KTGGG AGHNGL+SI
Sbjct: 61 PETFMNRSGQSVGEAMRFFKL-EPEDVIVFHDELDLAPGKCRVKTGGGHAGHNGLRSIHG 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y+R+R+GIG P + +VL +F+ E +L ++ I P LA + F
Sbjct: 120 HIGPEYQRVRLGIGHPGHKDRVSGYVLSDFAKAEAAWLDDLLRGIGDGAPELAAGDTGRF 179
Query: 181 LNHIVSVR 188
+N VS+R
Sbjct: 180 MN-AVSLR 186
>gi|85707108|ref|ZP_01038196.1| peptidyl-tRNA hydrolase [Roseovarius sp. 217]
gi|85668394|gb|EAQ23267.1| peptidyl-tRNA hydrolase [Roseovarius sp. 217]
Length = 228
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 114/187 (60%), Gaps = 1/187 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +DRI H F W+ KF +SEG L + IL+K
Sbjct: 1 MQLFVGLGNPGAKYENNRHNIGFMALDRIADEHGFGPWRSKFQGMVSEGDLGDDKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E + FYKL + V HD+LDL G LR KTGGG AGHNGL+S+ +
Sbjct: 61 PMTFMNLSGQSVGEALRFYKL-TPADVTVFHDELDLAPGKLRCKTGGGHAGHNGLRSLHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+GIG P + +VL +F+ E +L ++ +A+ P LA + F
Sbjct: 120 HIGETYGRVRLGIGHPGHKDRVAHYVLQDFAKSETDWLDDLLRGVAKGAPWLALGKPDRF 179
Query: 181 LNHIVSV 187
N +
Sbjct: 180 QNAVAQA 186
>gi|126731996|ref|ZP_01747799.1| peptidyl-tRNA hydrolase [Sagittula stellata E-37]
gi|126707528|gb|EBA06591.1| peptidyl-tRNA hydrolase [Sagittula stellata E-37]
Length = 228
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I GLGNPG +Y NRHNIGFM +DRI H F WK KF +++EG+L G + IL+K
Sbjct: 1 MQIFVGLGNPGAKYAANRHNIGFMAMDRIAGDHGFGPWKAKFQGQVAEGRLGGDKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M FYKL + V HD+LDL G R+K GG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVGEAMRFYKL-EPGDVTVFHDELDLAPGKCRVKMAGGHAGHNGLRSIHG 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y+R+R+GIG P + +VL +F ++ +L ++ I+ P LA + F
Sbjct: 120 HIGEAYRRVRLGIGHPGRKELVAAYVLHDFHKADQDWLDDLLRGISDGAPHLADGDAGKF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNAVA 184
>gi|330993036|ref|ZP_08316974.1| Peptidyl-tRNA hydrolase [Gluconacetobacter sp. SXCC-1]
gi|329759806|gb|EGG76312.1| Peptidyl-tRNA hydrolase [Gluconacetobacter sp. SXCC-1]
Length = 190
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 117/187 (62%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP NRHN+GFM +DRI + H F W+++F E++EG + + +L++
Sbjct: 1 MLLWTGLGNPEPGMSRNRHNVGFMAVDRIAARHGFAPWRRRFRGEVAEGMVGRHKVLLLR 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ + FYKLP E+ HD+LDLD G +R+K GGG AGHNGL+S+
Sbjct: 61 PMTYMNLSGESVQQAAAFYKLP-AESITAFHDELDLDPGRIRVKRGGGAAGHNGLRSMDR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K Y R+R+GIG P + HVLG+FS + +L P++D +A LLA +
Sbjct: 120 MLGTKEYWRVRLGIGHPGSRERVTGHVLGDFSRADHEWLDPMLDTLADEATLLADGKPEL 179
Query: 180 FLNHIVS 186
F+ + +
Sbjct: 180 FMTRMAA 186
>gi|75676695|ref|YP_319116.1| peptidyl-tRNA hydrolase [Nitrobacter winogradskyi Nb-255]
gi|119390971|sp|Q3SPM7|PTH_NITWN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|74421565|gb|ABA05764.1| peptidyl-tRNA hydrolase [Nitrobacter winogradskyi Nb-255]
Length = 202
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 117/184 (63%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F W+++F E SEG LD R I++K
Sbjct: 1 MRLFVGLGNPGTKYQGNRHNIGFMVVDEIARRHGFAPWRRRFQGEASEGTLDRERVIVLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ + + F+KL + +V HD+++L +R+K GGG AGHNGL+SIS
Sbjct: 61 PATYMNNSGNAVQDAVQFFKLKEAD-VVVFHDEIELPPAKVRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+R+G+G P + HVL +F+ ER ++ ++D +A + LL +D +F
Sbjct: 120 HIGNDYRRVRLGVGHPGVKELVHAHVLNDFARSERSWVEALVDTVAENAALLVAAKDSAF 179
Query: 181 LNHI 184
N +
Sbjct: 180 QNKV 183
>gi|13472407|ref|NP_103974.1| peptidyl-tRNA hydrolase [Mesorhizobium loti MAFF303099]
gi|21263856|sp|Q98HV6|PTH_RHILO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|14023153|dbj|BAB49760.1| peptidyl-tRNA hydrolase [Mesorhizobium loti MAFF303099]
Length = 240
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 120/182 (65%), Gaps = 1/182 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + AGLGNPG +Y +NRHN+GFM D I H F W KKF I+EG + G + ILIK
Sbjct: 1 MLVFAGLGNPGAKYADNRHNVGFMAADAIARRHSFSPWSKKFQGLIAEGTIAGEKIILIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E + FYKL L V +D++DL G LR+KTGGG GHNG++SI
Sbjct: 61 PQTFMNLSGQSVGEALRFYKL-ELSALTVFYDEIDLAEGKLRIKTGGGAGGHNGIRSIDG 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y+R+RIG+G P + HVLG+F+ +R +L P++D IA + ++ K ++ F
Sbjct: 120 HIGNAYRRVRIGVGHPGIKEMVQHHVLGDFAKADREWLDPLLDAIADNAAMIVKGDESGF 179
Query: 181 LN 182
+N
Sbjct: 180 MN 181
>gi|254486294|ref|ZP_05099499.1| peptidyl-tRNA hydrolase [Roseobacter sp. GAI101]
gi|214043163|gb|EEB83801.1| peptidyl-tRNA hydrolase [Roseobacter sp. GAI101]
Length = 238
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +D I + H F WK K +SEG+L R +L+K
Sbjct: 1 MKLIVGLGNPGAKYARNRHNIGFMALDMIAADHGFAPWKSKHQGLVSEGRLGSERAVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ M FYKL + +V+HD++DL ++ KTGGG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVQAAMRFYKL-EPSDVIVLHDEIDLAPAKVKCKTGGGHAGHNGLRSIHT 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F+ + +L ++ I+ P LA+ + F
Sbjct: 120 HIGPDYHRVRLGVGHPGHKDAVPGYVLRDFAKADEAWLDDVLRGISDGAPELARGDTAKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|182680480|ref|YP_001834626.1| peptidyl-tRNA hydrolase [Beijerinckia indica subsp. indica ATCC
9039]
gi|238691226|sp|B2IG63|PTH_BEII9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|182636363|gb|ACB97137.1| Aminoacyl-tRNA hydrolase [Beijerinckia indica subsp. indica ATCC
9039]
Length = 198
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 121/184 (65%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIGFM ID I + PA++ +F SE L G + +L+K
Sbjct: 1 MLLFVGLGNPGKAYSANRHNIGFMAIDAIAREYGAPAFRARFQGLTSEITLSGEKIVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MN SG+S+ + ++FYK+ + +V HD+LDL G +R+K GGG+AGHNGLKSI++
Sbjct: 61 PETYMNESGRSVSDAVHFYKI-DASRVIVFHDELDLAPGKVRVKKGGGNAGHNGLKSITQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+Y+R+RIGIG P + +VLG+FS E ++ + +IA + PLLAK ED +F
Sbjct: 120 HITNDYRRVRIGIGHPGIKDMVRHYVLGDFSKTESAWVETLCLSIAVNAPLLAKGEDENF 179
Query: 181 LNHI 184
N I
Sbjct: 180 QNKI 183
>gi|319781881|ref|YP_004141357.1| peptidyl-tRNA hydrolase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167769|gb|ADV11307.1| peptidyl-tRNA hydrolase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 241
Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 119/182 (65%), Gaps = 1/182 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + AGLGNPG +Y NRHN+GFM D I H F W KKF I+EG L G + +LIK
Sbjct: 1 MLLFAGLGNPGAKYAGNRHNVGFMAADAIARRHSFSPWSKKFQGLIAEGSLGGEKVVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ E + FYKL L V +D++DL G LR+KTGGG GHNG++SI
Sbjct: 61 PQTFMNLSGQTVGEALRFYKL-ELSALTVFYDEIDLAEGKLRIKTGGGAGGHNGIRSIDG 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y+R+RIG+G P + HVLG+F +R +L P++D IA + ++AK ++ F
Sbjct: 120 HVGNAYRRVRIGVGHPGVKEMVQHHVLGDFDKADREWLDPLLDAIADNAAMIAKGDESGF 179
Query: 181 LN 182
+N
Sbjct: 180 MN 181
>gi|148253297|ref|YP_001237882.1| peptidyl-tRNA hydrolase [Bradyrhizobium sp. BTAi1]
gi|166199309|sp|A5ECT2|PTH_BRASB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146405470|gb|ABQ33976.1| peptidyl-tRNA hydrolase [Bradyrhizobium sp. BTAi1]
Length = 201
Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 114/184 (61%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F W+++F E SEG LD R IL+K
Sbjct: 1 MLMFVGLGNPGAKYARNRHNIGFMAVDEISRRHGFSPWRRRFQGETSEGTLDSERVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E F+KL + + V D+L+L G LR+K GGG AGHNGL+SIS
Sbjct: 61 PTTYMNESGRAVQEAAGFFKL-GVGDVTVFQDELELPPGKLRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+R+GIG P + HVL +F+ E ++ + +A + LL + D +F
Sbjct: 120 HLGNDYRRVRLGIGHPGVKELVHGHVLSDFAKSEMPWVEALCQAVADNAGLLTGKRDSTF 179
Query: 181 LNHI 184
N +
Sbjct: 180 ANKV 183
>gi|260467096|ref|ZP_05813275.1| peptidyl-tRNA hydrolase [Mesorhizobium opportunistum WSM2075]
gi|259029108|gb|EEW30405.1| peptidyl-tRNA hydrolase [Mesorhizobium opportunistum WSM2075]
Length = 252
Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 124/185 (67%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ + AGLGNPG +Y +NRHN+GFM D I H F W KKF I+EG L G + ILIK
Sbjct: 6 VLVFAGLGNPGAKYADNRHNVGFMAADAIARRHSFSPWSKKFQGLIAEGTLGGEKIILIK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E++ FYKL E V +D++DL G +R+K GGG GHNG++S+ +
Sbjct: 66 PQTFMNLSGQSVGELLRFYKL-GPEALTVFYDEIDLAAGKVRVKVGGGSGGHNGIRSLDQ 124
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
GK+++R+RIG+G P + HVLG+F+ +R +L ++D IA LLAK +D SF
Sbjct: 125 HIGKDFRRVRIGVGHPGVKEMVHGHVLGDFAKADREWLDVLLDTIADDAGLLAKGDDNSF 184
Query: 181 LNHIV 185
+N +
Sbjct: 185 MNRVT 189
>gi|260431161|ref|ZP_05785132.1| peptidyl-tRNA hydrolase [Silicibacter lacuscaerulensis ITI-1157]
gi|260414989|gb|EEX08248.1| peptidyl-tRNA hydrolase [Silicibacter lacuscaerulensis ITI-1157]
Length = 226
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F W+ KF E+SEG+L + +L+K
Sbjct: 1 MKLFVGLGNPGAKYARNRHNIGFMAVDAIADAHGFGPWRSKFQGEVSEGRLGREKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQS+ E M FYKL + + V HD+LDL G +R K+GGG AGHNGL+SI +
Sbjct: 61 PMTYMNRSGQSVGEAMRFYKL-DSTDVTVFHDELDLAPGKVRAKSGGGHAGHNGLRSIHD 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y R+R+GIG P + +VLG+F+ + +L ++ ++ LA+ + F
Sbjct: 120 HIGAAYDRVRLGIGHPGRKELVSAYVLGDFAKADSQWLEDVLRGVSDGAVHLAEGDTGKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|110681038|ref|YP_684045.1| peptidyl-tRNA hydrolase [Roseobacter denitrificans OCh 114]
gi|119390998|sp|Q161I4|PTH_ROSDO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|109457154|gb|ABG33359.1| peptidyl-tRNA hydrolase [Roseobacter denitrificans OCh 114]
Length = 233
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +RHNIGFM +DRI + H F AWK K +SEG+ R +L+K
Sbjct: 1 MKLIVGLGNPGPKYAGHRHNIGFMALDRIAADHGFGAWKDKHQGSLSEGRFGSDRAVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQS+ M FYKL E+ +V+HD++DL G ++ KTGGG AGHNGL+SI
Sbjct: 61 PLTFMNNSGQSVQAAMRFYKL-EPEDVIVLHDEIDLAPGKVKYKTGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y R+R+G+G P + +VL +F+ ++ +L ++ ++ P LA E F
Sbjct: 120 HIGPEYARVRLGVGHPGHKDRVPGYVLHDFAKADQDWLDDVLRGVSDGAPFLATTEAAKF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 SNAVA 184
>gi|27382551|ref|NP_774080.1| peptidyl-tRNA hydrolase [Bradyrhizobium japonicum USDA 110]
gi|46576801|sp|Q89DJ9|PTH_BRAJA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|27355723|dbj|BAC52705.1| peptidyl-tRNA hydrolase [Bradyrhizobium japonicum USDA 110]
Length = 201
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 114/184 (61%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F W+++F E SEG L R IL+K
Sbjct: 1 MRLFVGLGNPGAKYARNRHNIGFMAVDEIARRHGFSPWRRRFQGETSEGALGTERVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ E F+K+ + V HD+L+L G +R+K GGG AGHNGL+SIS
Sbjct: 61 PTTYMNDSGRSVQEAAGFFKIAP-GDVTVFHDELELPPGKVRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+R+GIG P + HVL +F+ + ++ + D +A L+AK D +F
Sbjct: 120 HIGNDYRRVRLGIGHPGVKELVHGHVLSDFAKADNDWVATLCDAVAEHAALIAKGTDATF 179
Query: 181 LNHI 184
N +
Sbjct: 180 ANRV 183
>gi|146276404|ref|YP_001166563.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides ATCC 17025]
gi|166229442|sp|A4WPE4|PTH_RHOS5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145554645|gb|ABP69258.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides ATCC 17025]
Length = 225
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIG+M ++ I S H F W+ +F SEG+L + +L+K
Sbjct: 1 MKLFVGLGNPGARYAGNRHNIGYMAVEAIASAHGFGPWRSRFQGVTSEGRLGAEQVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M FYKL + + V HD+LDL G LRLK GGG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVGEAMRFYKL-SPADLTVFHDELDLAPGRLRLKQGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+GIG P + +VL +F+ ++ +L ++ IA LA+ + F
Sbjct: 120 HVGEAYGRVRLGIGHPGHKDAVASYVLNDFAKADQGWLEDLLRGIADGAEALARGDGARF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNAVA 184
>gi|144898694|emb|CAM75558.1| peptidyl-tRNA hydrolase [Magnetospirillum gryphiswaldense MSR-1]
Length = 232
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 123/185 (66%), Gaps = 2/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY +NRHNIGFM D + H F W+ KF ++EG +DG++ + +K
Sbjct: 1 MILVVGLGNPGSEYSQNRHNIGFMAADELVRRHSFGPWRAKFQGMLAEGSIDGVKVLALK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSGQS+ F K+P +E+ +VIHD+LD+ G +++K GGG GHNGLKSI
Sbjct: 61 PMTYMNLSGQSVAAAARFLKIP-VEDVVVIHDELDVAPGRVKVKRGGGAGGHNGLKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+NY+R+R+GIG P D + +VL +F+ E + + P+ID +A +LP L ++ F
Sbjct: 120 HLGQNYRRVRLGIGHPGDKDRVSGYVLADFAKAETW-VTPLIDAVAEALPKLLAGDEAGF 178
Query: 181 LNHIV 185
+N +
Sbjct: 179 MNKVA 183
>gi|114769271|ref|ZP_01446897.1| peptidyl-tRNA hydrolase [alpha proteobacterium HTCC2255]
gi|114550188|gb|EAU53069.1| peptidyl-tRNA hydrolase [alpha proteobacterium HTCC2255]
Length = 225
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 119/185 (64%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +++I + H F WK KF +I++G+L + IL+K
Sbjct: 1 MKLFVGLGNPGKKYTNNRHNIGFMALNQIANDHSFSPWKNKFQGQITDGKLGDEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E + FYK+ +E+ +V HD+LDL LR+K GG AGHNGL+SI +
Sbjct: 61 PETFMNLSGQSVSETIKFYKI-KIEDIIVFHDELDLATAKLRVKISGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+GIG P + +VL +F+ ++ +L ++ I+ LA + F
Sbjct: 120 HIGADYHRVRMGIGHPGHKDRVANYVLSDFAKNDQNWLQDLLFGISDGAIYLANNDAGKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|316935874|ref|YP_004110856.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris DX-1]
gi|315603588|gb|ADU46123.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris DX-1]
Length = 203
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 117/184 (63%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +NRHNIGFM ID I H F W+++F E ++G LDG+R L+K
Sbjct: 1 MRLFVGLGNPGTKYQDNRHNIGFMVIDEIARRHGFSPWRRRFQGETADGVLDGIRITLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E FYK+ E V HD+++L +R+K GGG AGHNGL+SIS
Sbjct: 61 PSTYMNDSGRAVQEAAGFYKIGQDE-IAVFHDEIELPPAKVRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + HVLG+F+ ER ++ + + A + L+A +D SF
Sbjct: 120 HVGNDYLRVRLGVGHPGAKELVHNHVLGDFAKSERPWVEALCEISADNAGLIANGKDASF 179
Query: 181 LNHI 184
N +
Sbjct: 180 ANKV 183
>gi|92118570|ref|YP_578299.1| peptidyl-tRNA hydrolase [Nitrobacter hamburgensis X14]
gi|119390968|sp|Q1QIV8|PTH_NITHX RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|91801464|gb|ABE63839.1| peptidyl-tRNA hydrolase [Nitrobacter hamburgensis X14]
Length = 204
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 114/184 (61%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F W+++F E SEG LD R +L+K
Sbjct: 1 MRLFVGLGNPGTKYQGNRHNIGFMVVDEIARRHGFAPWRRRFQGEASEGALDQERVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ + F+KL + +V HD+++L +R+K GGG AGHNGL+SIS
Sbjct: 61 PATYMNESGNAVQDAARFFKLTE-GDVVVFHDEIELPPAKVRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y+R+R+G+G P + HVL +F+ ER ++ ++D +A + LL D +F
Sbjct: 120 HIGNEYRRVRLGVGHPGVKERVHAHVLNDFAKSERPWVEALVDVVAENAALLVTARDSAF 179
Query: 181 LNHI 184
N +
Sbjct: 180 QNKV 183
>gi|153008960|ref|YP_001370175.1| peptidyl-tRNA hydrolase [Ochrobactrum anthropi ATCC 49188]
gi|151560848|gb|ABS14346.1| Aminoacyl-tRNA hydrolase [Ochrobactrum anthropi ATCC 49188]
Length = 251
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/191 (50%), Positives = 129/191 (67%), Gaps = 7/191 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +L+K
Sbjct: 1 MLLIAGLGNPGPKYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKL-TPADLVVIYDELDLIPGKLRIKTGGGSGGHNGIKSIDA 119
Query: 121 KC-----GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL-AK 174
G+NY+R+R+GIG P + +VLG+F+ + +L ++ IA ++ LL AK
Sbjct: 120 HMQAFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLLGAIADNVGLLAAK 179
Query: 175 REDVSFLNHIV 185
ED SF+N I
Sbjct: 180 GEDNSFMNRIA 190
>gi|163744227|ref|ZP_02151587.1| peptidyl-tRNA hydrolase [Oceanibulbus indolifex HEL-45]
gi|161381045|gb|EDQ05454.1| peptidyl-tRNA hydrolase [Oceanibulbus indolifex HEL-45]
Length = 235
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 113/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +DRI H F WK KF +SEG+ R +L+K
Sbjct: 1 MKLIVGLGNPGAKYARNRHNIGFMALDRIAEDHGFAPWKGKFQGSVSEGRFGSDRAVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN SGQS+ M FYK+ + + +V HD+LDL G ++ KTGGG AGHNGL+SI
Sbjct: 61 PETFMNNSGQSVQVAMKFYKI-DASDVIVFHDELDLAPGKVKCKTGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y R+R+GIG P + +VL +F + +L ++ I+ LA+ + F
Sbjct: 120 HIGAEYDRVRLGIGHPGHKDAVAGYVLRDFPKADEGWLDDVLRGISDGAADLARGDTGRF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|51473783|ref|YP_067540.1| peptidyl-tRNA hydrolase [Rickettsia typhi str. Wilmington]
gi|68052927|sp|Q68WD4|PTH_RICTY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|51460095|gb|AAU04058.1| Peptidyl-tRNA hydrolase [Rickettsia typhi str. Wilmington]
Length = 185
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 119/186 (63%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG Y RHNIGF+ I+RI + +H + K+KF+ +I+E +D + I
Sbjct: 1 MILVIGLGNPGIVYQYTRHNIGFIAIERIANKYHLSFSTKQKFNCKIAEAIIDRQKICFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + N E VIHDD+DL+ G ++ KTGG + GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVILVKTYYNI-NYEKVFVIHDDIDLEIGRIKFKTGGSNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y R+RIGIGRP + + +VL NFS E ++ IDN+A + L+ + +
Sbjct: 120 SIIGSHYNRIRIGIGRPQNNHDVADYVLSNFSESEYKTVMQSIDNVANNFGLILEHKLAE 179
Query: 180 FLNHIV 185
F N IV
Sbjct: 180 FKNKIV 185
>gi|254438461|ref|ZP_05051955.1| peptidyl-tRNA hydrolase [Octadecabacter antarcticus 307]
gi|198253907|gb|EDY78221.1| peptidyl-tRNA hydrolase [Octadecabacter antarcticus 307]
Length = 241
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 120/185 (64%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +NRHNIGFM +DRI + H F W+ KF +++EG+L + +L+K
Sbjct: 1 MKLFVGLGNPGAKYAQNRHNIGFMALDRIAADHGFAPWRSKFQGQLTEGRLGRDKILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E + FYKL + + +V HD++DL +RLK+GGG AGHNGL+SI +
Sbjct: 61 PETFMNLSGQSVGEAVRFYKL-DSTDVVVFHDEIDLAPAKVRLKSGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+Y R+R+G+G P + +VL +F+ ++ +L ++ ++ LA E F
Sbjct: 120 HISPHYDRVRLGVGHPGHKDRVPGYVLSDFAKADQNWLDDVLRGMSDGAAYLADNEGPKF 179
Query: 181 LNHIV 185
LN +
Sbjct: 180 LNAVA 184
>gi|84683371|ref|ZP_01011274.1| peptidyl-tRNA hydrolase [Maritimibacter alkaliphilus HTCC2654]
gi|84668114|gb|EAQ14581.1| peptidyl-tRNA hydrolase [Rhodobacterales bacterium HTCC2654]
Length = 227
Score = 164 bits (414), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +DRI H F W+ KF ++SEG L G + IL+K
Sbjct: 1 MKLFVGLGNPGSKYAGNRHNIGFMAVDRIREDHGFAPWRSKFQGQVSEGNLGGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M FYKL + + V HD+LDL ++LK GGG AGHNGL+SI +
Sbjct: 61 PETFMNLSGQSVGEAMRFYKLDSTD-VTVFHDELDLPPFKVKLKLGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+Y R+R+GIG P + +VL +F+ E +L ++ I+ L ++ F
Sbjct: 120 HISPHYGRVRLGIGHPGHKDRVSPYVLSDFAKQEEKWLDDMLRGISDGAEHLVTDDNAKF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 TNAVA 184
>gi|58039601|ref|YP_191565.1| peptidyl-tRNA hydrolase [Gluconobacter oxydans 621H]
gi|68052871|sp|Q5FRT7|PTH_GLUOX RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|58002015|gb|AAW60909.1| Peptidyl-tRNA hydrolase [Gluconobacter oxydans 621H]
Length = 189
Score = 164 bits (414), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 117/187 (62%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP +RHNIGFM +D I H F W+K+F E SEG + G + +L+K
Sbjct: 1 MRLWTGLGNPEPGMSRHRHNIGFMAVDEIARRHGFSPWRKRFRGETSEGVIGGQKILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG S+ + F+K+ ++ V HD+LDL FG LR+K GGG AGHNGL+S+ +
Sbjct: 61 PMTYMNRSGDSVQQAAQFFKIAQ-DDITVFHDELDLAFGKLRIKRGGGAAGHNGLRSM-D 118
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
KC G +Y R+R+GIG P + HVLGNF+ E L ++ IA + PLLAK+E
Sbjct: 119 KCLPGPDYWRVRMGIGHPGHKDRVTGHVLGNFAKAEEPELERWLEAIADAAPLLAKKEHE 178
Query: 179 SFLNHIV 185
+F+ +
Sbjct: 179 AFMTKVA 185
>gi|126463243|ref|YP_001044357.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides ATCC 17029]
gi|166229441|sp|A3PML9|PTH_RHOS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|126104907|gb|ABN77585.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides ATCC 17029]
Length = 225
Score = 164 bits (414), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIG+M ++ I + H F W+ +F SEG+L + +L+K
Sbjct: 1 MKLFVGLGNPGARYAGNRHNIGYMAVEAIAADHGFGPWRARFQGLTSEGRLGSEQVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M FYKL + +V HD+LDL G LRLK GGG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVGEAMRFYKL-TPADVIVFHDELDLAPGKLRLKQGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+GIG P + +VL +F+ ++ +L ++ IA LA+ + F
Sbjct: 120 HVGEAYGRVRLGIGHPGHKDAVAPYVLSDFAKADQDWLADLLRGIADGAEALARGDGAKF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNAVA 184
>gi|114767699|ref|ZP_01446392.1| peptidyl-tRNA hydrolase [Pelagibaca bermudensis HTCC2601]
gi|114540295|gb|EAU43394.1| peptidyl-tRNA hydrolase [Roseovarius sp. HTCC2601]
Length = 241
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 115/183 (62%), Gaps = 1/183 (0%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
I GLGNPG +Y NRHNIGFM +DRI H F W+ +F AE+SEG+L G + +L+KP
Sbjct: 7 IFVGLGNPGGKYARNRHNIGFMALDRIAEDHGFGPWRARFQAEVSEGRLGGDKVLLLKPG 66
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSGQ++ E M F+KL ++ V HD+LDL G R+KTGGG AGHNGL+SI
Sbjct: 67 TFMNLSGQAVGEAMRFFKL-EPDDVTVFHDELDLAPGKCRVKTGGGHAGHNGLRSIHAHI 125
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
G+ Y R+R+GIG P + +VL +F + +L ++ I+ LA+ + F N
Sbjct: 126 GETYHRVRLGIGHPGRKDLVAAYVLHDFHKADEDWLDDLLRGISDGAGELARGDTGKFQN 185
Query: 183 HIV 185
+
Sbjct: 186 AVA 188
>gi|259415677|ref|ZP_05739598.1| peptidyl-tRNA hydrolase [Silicibacter sp. TrichCH4B]
gi|259348907|gb|EEW60669.1| peptidyl-tRNA hydrolase [Silicibacter sp. TrichCH4B]
Length = 243
Score = 163 bits (413), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D+I S H F WK KF A++SEG L G + IL+K
Sbjct: 1 MKLFVGLGNPGAKYAGNRHNIGFMALDQIASDHGFSPWKSKFQAQMSEGTLTGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SGQS+ E + F+KL + +V HD+LDL G R+K GGG AGHNGL+SI
Sbjct: 61 PQTFMNNSGQSVGEALRFFKL-TPADVVVFHDELDLAPGKCRVKQGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F ++ +L ++ ++ LA F
Sbjct: 120 HIGADYARVRLGVGHPGHKDAVAGYVLRDFPKADQGWLDDLLRGLSDGAHSLATGNSGRF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|296532496|ref|ZP_06895213.1| aminoacyl-tRNA hydrolase [Roseomonas cervicalis ATCC 49957]
gi|296267180|gb|EFH13088.1| aminoacyl-tRNA hydrolase [Roseomonas cervicalis ATCC 49957]
Length = 190
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 118/186 (63%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP +RHNIGFM +D I H F W++++ ++EG +DG + +L+K
Sbjct: 1 MLLWVGLGNPEPGQARHRHNIGFMALDAIARRHGFTPWRQRYKGLVAEGSIDGRKLLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ F+K+P L + HD+LDL G +R+K GGG AGHNGL+ +
Sbjct: 61 PQTYMNLSGESVQPAAAFHKIP-LSDITAFHDELDLAPGKIRVKKGGGAAGHNGLRDMDR 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y R+R+GIG P + HVLGNF+ + + L P++D +A + PLLA+ E +
Sbjct: 120 RLGAPDYWRVRLGIGHPGSKEKVTGHVLGNFAKVDTW-LEPMLDAVAEAAPLLARGETEA 178
Query: 180 FLNHIV 185
F+ +
Sbjct: 179 FMTRVA 184
>gi|221640291|ref|YP_002526553.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides KD131]
gi|254783885|sp|B9KMG1|PTH_RHOSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|221161072|gb|ACM02052.1| Peptidyl-tRNA hydrolase [Rhodobacter sphaeroides KD131]
Length = 225
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIG+M ++ I + H F W+ +F SEG+L + +L+K
Sbjct: 1 MKLFVGLGNPGARYAGNRHNIGYMAVEAIAADHGFGPWRARFQGLTSEGRLGSEQVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M FYKL + +V HD+LDL G LRLK GGG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVGEAMRFYKLTP-ADVIVFHDELDLAPGKLRLKQGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+GIG P + +VL +F+ ++ +L ++ I+ LA+ + F
Sbjct: 120 HVGEAYGRVRLGIGHPGHKDAVAAYVLNDFAKADQDWLADLLRGISDGAEALARGDGAKF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNAVA 184
>gi|39937415|ref|NP_949691.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris CGA009]
gi|192293198|ref|YP_001993803.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris TIE-1]
gi|68052965|sp|Q6N1P9|PTH_RHOPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|229485511|sp|B3Q7X3|PTH_RHOPT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|39651274|emb|CAE29796.1| putative peptidyl-tRNA hydrolase [Rhodopseudomonas palustris
CGA009]
gi|192286947|gb|ACF03328.1| Aminoacyl-tRNA hydrolase [Rhodopseudomonas palustris TIE-1]
Length = 206
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 117/184 (63%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM ID I H F W+++F E ++G LDG R L+K
Sbjct: 1 MRLFVGLGNPGAKYQGNRHNIGFMVIDEIARRHGFSPWRRRFQGETADGVLDGERITLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ + +FYK+ E V HD+++L +R+K GGG AGHNGL+SIS
Sbjct: 61 PLTYMNESGRAVQDAASFYKIGQNE-IAVFHDEIELPPAKVRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + HVLG+F+ ER ++ + + A + L+AK +D SF
Sbjct: 120 HIGNDYLRVRLGVGHPGAKELVHNHVLGDFAKSERPWVEALCEIAADNAGLIAKGKDASF 179
Query: 181 LNHI 184
N +
Sbjct: 180 ANKV 183
>gi|254293129|ref|YP_003059152.1| peptidyl-tRNA hydrolase [Hirschia baltica ATCC 49814]
gi|254041660|gb|ACT58455.1| peptidyl-tRNA hydrolase [Hirschia baltica ATCC 49814]
Length = 230
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 121/190 (63%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG-----LR 55
M ++ GLGNPG +Y NRHNIGFM ID I H F WK KF +ISEG L ++
Sbjct: 26 MLLLVGLGNPGDQYKGNRHNIGFMAIDAIADMHGFSPWKTKFQGKISEGFLTDANGGRVK 85
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
T+L+KP TF N SG+S+ E MNF+K+ + + ++ HD++DL G +R+K GGG +G+NG+
Sbjct: 86 TLLLKPTTFYNDSGRSVGEAMNFFKI-SADQTVIFHDEIDLAPGRVRMKIGGGHSGNNGM 144
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+SI + K+ +R R+G+G P D + + HVL +F+ E +L ++D AR++ LA
Sbjct: 145 RSIMAQASKDVRRTRLGVGHPGDKSRVQGHVLSDFAKSEAKWLDDMLDACARAIHFLAAG 204
Query: 176 EDVSFLNHIV 185
+D F ++
Sbjct: 205 DDERFQAEVM 214
>gi|163741698|ref|ZP_02149088.1| peptidyl-tRNA hydrolase [Phaeobacter gallaeciensis 2.10]
gi|161384871|gb|EDQ09250.1| peptidyl-tRNA hydrolase [Phaeobacter gallaeciensis 2.10]
Length = 159
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 105/158 (66%), Gaps = 1/158 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D+I S H F WK KF A+ISEG L + +L+K
Sbjct: 1 MKLFVGLGNPGAKYAGNRHNIGFMALDQIASDHGFSPWKSKFQAQISEGVLGRTKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + V+HD+LDL G R+K GGG AGHNGL+SI
Sbjct: 61 PQTFMNLSGQSVGEAMRFYKL-TPADVTVLHDELDLAPGKARVKQGGGHAGHNGLRSIHS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G +Y R+R+GIG P + +VL +F+ + +L
Sbjct: 120 HIGADYGRVRLGIGHPGHKDAVAGYVLRDFAKADEAWL 157
>gi|85716024|ref|ZP_01047001.1| peptidyl-tRNA hydrolase [Nitrobacter sp. Nb-311A]
gi|85697222|gb|EAQ35103.1| peptidyl-tRNA hydrolase [Nitrobacter sp. Nb-311A]
Length = 204
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 115/184 (62%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F W+++F E SEG LD R IL+K
Sbjct: 1 MRLFVGLGNPGTKYQGNRHNIGFMVVDEIARRHGFAPWRRRFQGEASEGTLDRERVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ + + F+KL + +V HD+++L +R+K GGG AGHNGL+SIS
Sbjct: 61 PATYMNNSGNAVQDAVRFFKLTE-GDVVVFHDEIELPSAKVRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y+R+R+G+G P + HVL +F+ ER ++ ++D +A + LL D +F
Sbjct: 120 HIGNGYRRVRLGVGHPGVKDLVHAHVLNDFAKGERPWVDALVDVVAENAALLVAARDSTF 179
Query: 181 LNHI 184
N +
Sbjct: 180 QNKV 183
>gi|77464401|ref|YP_353905.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides 2.4.1]
gi|119390995|sp|Q3IZN0|PTH_RHOS4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|77388819|gb|ABA80004.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides 2.4.1]
Length = 225
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIG+M ++ I + H F W+ +F SEG+L + +L+K
Sbjct: 1 MKLFVGLGNPGARYAGNRHNIGYMAVEAIAADHGFGPWRARFQGLTSEGRLGSEQVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M FYKL + +V HD+LDL G LRLK GGG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVGEAMRFYKL-TPADVIVFHDELDLAPGKLRLKQGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+GIG P + +VL +F+ ++ +L ++ I+ LA+ + F
Sbjct: 120 HVGEAYGRVRLGIGHPGHKDAVAPYVLSDFAKADQDWLADLLRGISDGAEALARGDGAKF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNAVA 184
>gi|170740630|ref|YP_001769285.1| peptidyl-tRNA hydrolase [Methylobacterium sp. 4-46]
gi|238688063|sp|B0UGY2|PTH_METS4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|168194904|gb|ACA16851.1| Aminoacyl-tRNA hydrolase [Methylobacterium sp. 4-46]
Length = 203
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 118/184 (64%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIGFM +D + H W++KF E SE + R +L+K
Sbjct: 1 MRLFVGLGNPGARYAANRHNIGFMALDAVARRHRAAPWRRKFQGEASEAVIGTERVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MN SG+++ E FYK+ L++ +V HD+LDL +R+K GGG+AGHNGL+SI+
Sbjct: 61 PETYMNESGRAVAEAQRFYKIA-LDDVVVFHDELDLAPAKVRVKKGGGNAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+CG Y R+R+GIG P D A + +VL +F+ ER ++ + D +A LLA ED +F
Sbjct: 120 QCGNEYWRVRLGIGHPGDKALVHAYVLNDFAKAERPWVDDLCDALADHAALLAAGEDANF 179
Query: 181 LNHI 184
N I
Sbjct: 180 QNRI 183
>gi|209886301|ref|YP_002290158.1| peptidyl-tRNA hydrolase [Oligotropha carboxidovorans OM5]
gi|226707538|sp|B6JIP3|PTH_OLICO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|209874497|gb|ACI94293.1| peptidyl-tRNA hydrolase [Oligotropha carboxidovorans OM5]
Length = 201
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 113/184 (61%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F W+++F E SEG L G R +L+K
Sbjct: 1 MRLFVGLGNPGSKYEGNRHNIGFMVVDEIARRHGFSPWRRRFQGETSEGVLGGERVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E F+KL E +V HD+++L +R+K GGG AGHNGL+SIS
Sbjct: 61 PATYMNESGRAVQEAAKFFKLGESE-VVVFHDEIELPPAKMRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y+R+R+G+G P + HVL +F+ ER ++ + + +A LL +D F
Sbjct: 120 HLGNEYRRVRLGVGHPGVKEIVHIHVLNDFAKSERPWVAALCETVAEHAELLVSGKDSQF 179
Query: 181 LNHI 184
N +
Sbjct: 180 QNRV 183
>gi|84500228|ref|ZP_00998494.1| peptidyl-tRNA hydrolase [Oceanicola batsensis HTCC2597]
gi|84392162|gb|EAQ04430.1| peptidyl-tRNA hydrolase [Oceanicola batsensis HTCC2597]
Length = 228
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +DRI S H F W+ KF E++EG L G + +L+K
Sbjct: 1 MKLFVGLGNPGGKYAANRHNIGFMALDRIASDHGFAPWRTKFQGELAEGTLGGEKLLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E M FYKL + V HD+LDL G +R+K GGG AGHNGL+SI +
Sbjct: 61 PMTFMNLSGQSVGEAMRFYKL-TPADVTVFHDELDLAPGKVRVKQGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+R+GIG P + +VL +F+ E+ L ++ ++ P LA + F
Sbjct: 120 HIGADYQRVRLGIGHPGHKDKVAPYVLADFAKAEQDGLDDLLRGLSDGAPELAGDDAGRF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|296446565|ref|ZP_06888507.1| peptidyl-tRNA hydrolase [Methylosinus trichosporium OB3b]
gi|296255919|gb|EFH03004.1| peptidyl-tRNA hydrolase [Methylosinus trichosporium OB3b]
Length = 201
Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 116/184 (63%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y +NRHNIGFM ++ I H F + +F + EG + G R + +
Sbjct: 1 MLLLVGLGNPGRAYAKNRHNIGFMAVEAIADAHGFSPPRTRFQGLVREGTIAGERVLALL 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ E + F+K+ + + +V+HD+LDL R+KTGGG AGHNGL+SI
Sbjct: 61 PQTYMNESGRAVGEALRFHKM-TIGDVVVLHDELDLPPAKCRVKTGGGAAGHNGLRSIGA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +KRLR+GIG P D A + +VL +F+ E ++ + D +A + L+AKR+D
Sbjct: 120 HIGAEFKRLRLGIGHPGDKALVHSYVLNDFAKSEEPWVRALCDALADNAALIAKRDDAGL 179
Query: 181 LNHI 184
N I
Sbjct: 180 QNKI 183
>gi|254462367|ref|ZP_05075783.1| peptidyl-tRNA hydrolase [Rhodobacterales bacterium HTCC2083]
gi|206678956|gb|EDZ43443.1| peptidyl-tRNA hydrolase [Rhodobacteraceae bacterium HTCC2083]
Length = 227
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 115/188 (61%), Gaps = 2/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +NRHNIGFM +D I H F WK +F ++S G L + +L+K
Sbjct: 1 MQLFVGLGNPGAKYAKNRHNIGFMVVDEIAGDHGFTPWKSQFQGQVSSGTLGSEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E M FYK+ E+ V HD+LDL +R+K GG AGHNGL+SI +
Sbjct: 61 PATFMNLSGQSVGEAMRFYKM-TPEDVTVFHDELDLAPSKVRVKKSGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G++Y+R+R+GIG P + +VL +F+ E +L + + LA + F
Sbjct: 120 HIGEHYQRVRLGIGHPGHKDRVAGYVLSDFAKAEAGWLDDVTRGCSDGAKELASGDTGRF 179
Query: 181 LNHIVSVR 188
+N VS+R
Sbjct: 180 MN-AVSLR 186
>gi|163734578|ref|ZP_02142017.1| peptidyl-tRNA hydrolase [Roseobacter litoralis Och 149]
gi|161392071|gb|EDQ16401.1| peptidyl-tRNA hydrolase [Roseobacter litoralis Och 149]
Length = 247
Score = 161 bits (407), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 113/183 (61%), Gaps = 1/183 (0%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y +RHNIGFM +DRI + H F AWK K ISEG+ R IL+KP
Sbjct: 17 LIVGLGNPGPKYAGHRHNIGFMALDRIAADHGFTAWKDKHQGSISEGRFGSDRAILLKPL 76
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMN SGQS+ M FYKL ++ +V+HD++DL G ++ K GGG AGHNGL+SI
Sbjct: 77 TFMNNSGQSVQAAMRFYKL-EPKDVIVLHDEIDLAPGKVKHKVGGGHAGHNGLRSIHAHI 135
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
G Y R+R+G+G P + +VL +F+ ++ +L ++ ++ P LA E F N
Sbjct: 136 GPEYARVRLGVGHPGHKDRVPGYVLHDFAKADQNWLDDVLRGVSDGAPFLAATEAAKFSN 195
Query: 183 HIV 185
+
Sbjct: 196 AVA 198
>gi|154246547|ref|YP_001417505.1| peptidyl-tRNA hydrolase [Xanthobacter autotrophicus Py2]
gi|238686725|sp|A7IIK5|PTH_XANP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|154160632|gb|ABS67848.1| Aminoacyl-tRNA hydrolase [Xanthobacter autotrophicus Py2]
Length = 202
Score = 161 bits (407), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 119/182 (65%), Gaps = 1/182 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF+ AGLGNPG +Y NRHNIGFM ++ I H +++F + +EG++ G + I +
Sbjct: 1 MFLFAGLGNPGPKYAGNRHNIGFMALEAICRRHRLGPLRRRFQSLAAEGEIAGEKVIALF 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MN SG+++ E FYK+P L++ V HD+LDL LR+K GGG+AGHNGL+SI+
Sbjct: 61 PETYMNESGRAVSEAQRFYKIP-LDHIFVFHDELDLPPAKLRIKKGGGNAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+CG +Y R+R+GIG P D A + +VL +F+ E+ +L + D A LLA++ F
Sbjct: 120 QCGNDYFRVRLGIGHPGDKALVHAYVLNDFAKSEKPWLDAVCDACADFADLLAQKRPEEF 179
Query: 181 LN 182
N
Sbjct: 180 QN 181
>gi|34581436|ref|ZP_00142916.1| peptidyl-tRNA hydrolase [Rickettsia sibirica 246]
gi|28262821|gb|EAA26325.1| peptidyl-tRNA hydrolase [Rickettsia sibirica 246]
Length = 185
Score = 160 bits (406), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 118/186 (63%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHN+GF+ I++I + ++ + KKKF+ EI+E DG + I I
Sbjct: 1 MLLVIGLGNPGKEYQYTRHNVGFIAIEKIANQYNSSFSTKKKFNCEIAETISDGQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + + VIHDD+DL+ G ++ KTG G+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNIYPAK-IFVIHDDIDLETGRIKFKTGDGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+RIG+GRP + + +VL +FS PE ++ ID I + L+ + +
Sbjct: 120 GVIGNNYNRIRIGVGRPQNNQDVADYVLNHFSKPEYETVMQAIDRITSNFGLILENKLEE 179
Query: 180 FLNHIV 185
F N I
Sbjct: 180 FKNKIA 185
>gi|311898016|dbj|BAJ30424.1| putative peptidyl-tRNA hydrolase [Kitasatospora setae KM-6054]
Length = 195
Score = 160 bits (405), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 79/171 (46%), Positives = 109/171 (63%), Gaps = 1/171 (0%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG EY NRHNIGFM ++ + K A+++EG+L G R +L +P
Sbjct: 12 WLVVGLGNPGKEYARNRHNIGFMVVELLAQRAGAKFKAHKSRAQVAEGRLAGRRVVLAEP 71
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+FMNLSG + + +FYK+P + +HD+LDLD+ LRLKTGGGD GHNGLKS+++
Sbjct: 72 MSFMNLSGGPVTALRDFYKVPT-SAIVAVHDELDLDYAALRLKTGGGDNGHNGLKSMTKS 130
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G +Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 131 LGPDYHRVRCGIGRPPGRMEVADFVLKDFSSTERKDLDWFVDRAADAVEAL 181
>gi|260574078|ref|ZP_05842083.1| peptidyl-tRNA hydrolase [Rhodobacter sp. SW2]
gi|259023544|gb|EEW26835.1| peptidyl-tRNA hydrolase [Rhodobacter sp. SW2]
Length = 235
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + AGLGNPG +Y NRHNIGFM +DRI + H F W+ +F +EG L G + +L+K
Sbjct: 1 MKLFAGLGNPGAKYAGNRHNIGFMAVDRIAADHGFGPWRSRFQGLAAEGSLGGEKLVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E + FYKL + +V HD+LDL G R+K GGG AGHNGL+SI
Sbjct: 61 PATFMNLSGQSVAEALRFYKL-TPADLVVFHDELDLAPGKARVKQGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+GIG P + +VL +F+ + +L ++ I+ LLA + F
Sbjct: 120 HIGEAYGRVRLGIGHPGHKDAVAAYVLNDFAKADADWLEDLLHGISDGAALLAAGDGARF 179
Query: 181 LNHIV 185
LN +
Sbjct: 180 LNALA 184
>gi|220922770|ref|YP_002498072.1| peptidyl-tRNA hydrolase [Methylobacterium nodulans ORS 2060]
gi|254783877|sp|B8IFN4|PTH_METNO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219947377|gb|ACL57769.1| peptidyl-tRNA hydrolase [Methylobacterium nodulans ORS 2060]
Length = 203
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 117/184 (63%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIGFM +D I H W++KF E SE L R +L+K
Sbjct: 1 MRLFVGLGNPGSRYAGNRHNIGFMALDAIARRHRAAPWRRKFQGEASEAVLGSERVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MN SG+++ E FYK+ L++ +V HD+LDL +R+K GGG+AGHNGL+SI+
Sbjct: 61 PETYMNESGRAVAEAQRFYKIA-LDDVVVFHDELDLGPTKVRVKRGGGNAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG Y R+R+GIG P D A + +VL +F+ ER ++ + D +A LLA ED +F
Sbjct: 120 LCGNEYWRVRLGIGHPGDKALVHAYVLNDFAKAERPWVDDLCDALADHAALLAAGEDAAF 179
Query: 181 LNHI 184
N +
Sbjct: 180 QNKV 183
>gi|83313446|ref|YP_423710.1| peptidyl-tRNA hydrolase [Magnetospirillum magneticum AMB-1]
gi|119390956|sp|Q2VZ24|PTH_MAGMM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|82948287|dbj|BAE53151.1| Peptidyl-tRNA hydrolase [Magnetospirillum magneticum AMB-1]
Length = 234
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 121/185 (65%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y NRHNIGFM D + + F W+ KF E++EG + G + I +K
Sbjct: 1 MLLVVGLGNPGSDYARNRHNIGFMAADVLVRRYSFGPWRSKFQGEVAEGIIGGEKVIALK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQS+ F K+P +++ +V+HD+LD+ G L++K GGG GHNGLKSI
Sbjct: 61 PQTYMNLSGQSVAAAARFLKVP-VDDIIVLHDELDVAPGRLKVKRGGGAGGHNGLKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+NY+R+R+GIG P D + +VL +F+ + +L+P++D +A + P+L +D F
Sbjct: 120 HLGQNYRRVRLGIGHPGDRDLVSGYVLHDFAKADEAWLVPVLDAVADTFPMLVSGDDAGF 179
Query: 181 LNHIV 185
+
Sbjct: 180 ATRVA 184
>gi|90422927|ref|YP_531297.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris BisB18]
gi|119390992|sp|Q219F8|PTH_RHOPB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|90104941|gb|ABD86978.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris BisB18]
Length = 201
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 116/184 (63%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +D + H F W+++F E ++G + G R L+K
Sbjct: 1 MRLLVGLGNPGAKYQGNRHNIGFMVLDEMARRHGFSPWRRRFQGETADGSIGGERVTLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ + +F+KL L + V+HD+++L LR+K GGG AGHNGL+SIS
Sbjct: 61 PLTYMNDSGRAVQDAASFFKL-GLPDITVVHDEIELPAAKLRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+RIG+G P + HVL +F+ ER ++ +I+ I LL D +F
Sbjct: 120 HVGNDYRRVRIGVGHPGAKELVHGHVLNDFAKSERPWVEAMIEAIVEHAGLLVDGRDSTF 179
Query: 181 LNHI 184
N +
Sbjct: 180 QNKV 183
>gi|84515240|ref|ZP_01002602.1| peptidyl-tRNA hydrolase [Loktanella vestfoldensis SKA53]
gi|84510523|gb|EAQ06978.1| peptidyl-tRNA hydrolase [Loktanella vestfoldensis SKA53]
Length = 221
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +NRHNIGFM +DRI H F W+ KF +ISEG++ + L+K
Sbjct: 1 MKLLIGLGNPGAKYAQNRHNIGFMAMDRIAGDHGFSPWRAKFQGQISEGRIGPDKVALLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M + KL + +V HD++DL G +RLKTGGG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVGEAMRYLKL-TPADLIVFHDEIDLAPGKVRLKTGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F+ + +L + I+ + L + F
Sbjct: 120 HIGPDYDRVRLGVGHPGHKDAVPGYVLHDFAKADLDWLDDEMRGISDGIAHLVTGDGARF 179
Query: 181 LNHIV 185
LN I
Sbjct: 180 LNAIA 184
>gi|254449448|ref|ZP_05062885.1| peptidyl-tRNA hydrolase [Octadecabacter antarcticus 238]
gi|198263854|gb|EDY88124.1| peptidyl-tRNA hydrolase [Octadecabacter antarcticus 238]
Length = 282
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +NRHNIGFM +DRI + H F W+ KF +++E +L + +L+K
Sbjct: 39 MKLFVGLGNPGAKYAQNRHNIGFMALDRIAADHGFAPWRSKFQGQLTEERLGRDKVLLLK 98
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E + FYKL + + +V HD++DL +RLK+GGG AGHNGL+SI +
Sbjct: 99 PETFMNLSGQSVGEAVRFYKL-DSTDVVVFHDEIDLAPAKVRLKSGGGHAGHNGLRSIHQ 157
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+Y R+R+G+G P + +VL +F+ ++ +L ++ I+ LA F
Sbjct: 158 HISPHYDRVRLGVGHPGHKDRVPGYVLSDFAKADQNWLDDVLRGISDGAAYLADDAGPKF 217
Query: 181 LNHIV 185
LN +
Sbjct: 218 LNAVA 222
>gi|87200132|ref|YP_497389.1| peptidyl-tRNA hydrolase [Novosphingobium aromaticivorans DSM 12444]
gi|119390972|sp|Q2G6G8|PTH_NOVAD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|87135813|gb|ABD26555.1| peptidyl-tRNA hydrolase [Novosphingobium aromaticivorans DSM 12444]
Length = 191
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 119/185 (64%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +RHN+GFM +D I H F +KKF + EG++ + +L+K
Sbjct: 1 MQLWVGLGNPGPQYALHRHNVGFMALDTIAEVHNFGPVQKKFQGWLQEGRIGTEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E M FYKL ++ +V HD+LDL +++K GGG AGHNGL+SI +
Sbjct: 61 PATFMNESGRSVGEAMRFYKL-GMDALVVFHDELDLAPFKVKVKQGGGTAGHNGLRSIDK 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ R+R+GIG P + HVLGNF+ E+ L+ ++ IA LLAK ++V F
Sbjct: 120 HLGPDFLRVRLGIGHPGHKDRVTGHVLGNFAKSEQDDLVDMLGAIASEAALLAKGDNVLF 179
Query: 181 LNHIV 185
+N+I
Sbjct: 180 MNNIA 184
>gi|209543255|ref|YP_002275484.1| peptidyl-tRNA hydrolase [Gluconacetobacter diazotrophicus PAl 5]
gi|209530932|gb|ACI50869.1| Aminoacyl-tRNA hydrolase [Gluconacetobacter diazotrophicus PAl 5]
Length = 192
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 121/186 (65%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP +RHN+GFM +DRI + H F W+K+F E++EG++ + +L+K
Sbjct: 1 MLLWTGLGNPEPGMSRHRHNVGFMAVDRIATRHGFAPWRKRFRGEVAEGRVGTHKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ + FYK+P +E+ HD+LDL G +R+K GGG AGHNGL+S+ +
Sbjct: 61 PLTYMNLSGESVQQAAAFYKIP-VESITAFHDELDLAPGRVRVKRGGGAAGHNGLRSMDK 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++Y R+RIGIG P + HVLG+F+ ++ +L ++D ++ + P+LA +
Sbjct: 120 MLGSQDYWRVRIGIGHPGVRERVTGHVLGDFAKSDQDWLERMLDAMSDTAPVLADGQPEL 179
Query: 180 FLNHIV 185
F+ +
Sbjct: 180 FMTKMA 185
>gi|323136055|ref|ZP_08071138.1| peptidyl-tRNA hydrolase [Methylocystis sp. ATCC 49242]
gi|322399146|gb|EFY01665.1| peptidyl-tRNA hydrolase [Methylocystis sp. ATCC 49242]
Length = 201
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 113/184 (61%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIGFM I+ I H FPA + +F EG + G R +L++
Sbjct: 1 MLLFVGLGNPGRAYARNRHNIGFMAIEAIARRHGFPAARARFQGLSREGTIAGERVMLLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ E F+K+ + +V HD+LDL R+KTGGG AGHNGL+SI+
Sbjct: 61 PQTYMNESGRSVGEAARFHKI-GVGEIVVFHDELDLAPAKCRVKTGGGVAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +YKR+R+GIG P D + + +VL +F E ++ + D IA + L+ K +D
Sbjct: 120 HVGNDYKRVRMGIGHPGDKSLVHSYVLNDFGRSEEPWVEALCDAIADNADLIVKGDDAGL 179
Query: 181 LNHI 184
N +
Sbjct: 180 QNRL 183
>gi|115523457|ref|YP_780368.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris BisA53]
gi|122297067|sp|Q07RP6|PTH_RHOP5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|115517404|gb|ABJ05388.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris BisA53]
Length = 201
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 115/184 (62%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +D I H F W+++F E ++G + G R L+K
Sbjct: 1 MRLLVGLGNPGAKYQGNRHNIGFMALDEIARRHGFSPWRRRFQGETADGSIGGERVTLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ + +F+KL L +V+HD+++L LR+K GGG AGHNGL+SIS
Sbjct: 61 PLTFMNDSGRAVQDAASFFKL-GLPEIIVLHDEIELPAAKLRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y+R+RIG+G P + HVL +F+ ER ++ +++ I + LL D F
Sbjct: 120 HIGNEYRRVRIGVGHPGVKELVHGHVLNDFAKAERPWVEAMLEAITDNADLLVGDRDSQF 179
Query: 181 LNHI 184
N +
Sbjct: 180 QNKV 183
>gi|320161445|ref|YP_004174669.1| peptidyl-tRNA hydrolase [Anaerolinea thermophila UNI-1]
gi|319995298|dbj|BAJ64069.1| peptidyl-tRNA hydrolase [Anaerolinea thermophila UNI-1]
Length = 208
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 106/168 (63%), Gaps = 2/168 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG EY ENRHN GFM IDR+ + + A I+ GQ G R IL KP
Sbjct: 18 FLIVGLGNPGREYRENRHNAGFMFIDRLAKALLITPGRVQSKAIIATGQYAGKRLILAKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSGQS+ + FYK+P E LV HDDLDL GTLRL+ GGG AG G+ SI ++
Sbjct: 78 QTYMNLSGQSVKGLAQFYKIPP-EQILVAHDDLDLPLGTLRLRPGGGSAGQKGVSSIIQQ 136
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
G + + RLRIGIGRPP +VL +FS E+ L ++D ++
Sbjct: 137 LGTSQFCRLRIGIGRPPGQMDPAAYVLQDFSEKEKEILDEVMDRAVKA 184
>gi|326387511|ref|ZP_08209119.1| peptidyl-tRNA hydrolase [Novosphingobium nitrogenifigens DSM 19370]
gi|326208015|gb|EGD58824.1| peptidyl-tRNA hydrolase [Novosphingobium nitrogenifigens DSM 19370]
Length = 189
Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 115/189 (60%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHN+GFM +D I H F +KKF + +G++ R IL+K
Sbjct: 1 MQLWVGLGNPGPQYALNRHNVGFMALDVIADVHRFGPVQKKFQGWVQDGRIGTERVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E M F+KL + V HD+LDL +++K GGG AGHNGL+SI
Sbjct: 61 PATFMNESGRAVGEAMRFFKLTT-ADLTVFHDELDLAPFKVKVKIGGGTAGHNGLRSIER 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
++R+R+GIG P + HVLGNF+ E L ++ +ARS LA+ +DV F
Sbjct: 120 HADAAFRRVRLGIGHPGHKDRVTGHVLGNFAKSEGDDLTDMLGAVARSAEWLARGDDVRF 179
Query: 181 LNHIVSVRK 189
+N + ++
Sbjct: 180 MNDVALAQQ 188
>gi|126735031|ref|ZP_01750777.1| Aminoacyl-tRNA hydrolase [Roseobacter sp. CCS2]
gi|126715586|gb|EBA12451.1| Aminoacyl-tRNA hydrolase [Roseobacter sp. CCS2]
Length = 224
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +NRHNIG+M +DRI + H F W+ KF + +G+ R L+K
Sbjct: 1 MKLLVGLGNPGAKYAQNRHNIGYMALDRIAADHGFSGWRSKFQGQTCDGRFGSERVTLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M + KL + ++ +V HD++DL G +RLKTGGG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVGEAMRYLKLAS-DDIIVFHDEIDLAPGKVRLKTGGGHAGHNGLRSIHG 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F + +L + I+ + L + F
Sbjct: 120 HIGPDYDRVRMGVGHPGHKDAVPGYVLRDFPKADAEWLDDALRGISDGIADLIAGDGGKF 179
Query: 181 LNHIV 185
LN I
Sbjct: 180 LNAIA 184
>gi|83943887|ref|ZP_00956344.1| peptidyl-tRNA hydrolase [Sulfitobacter sp. EE-36]
gi|83845134|gb|EAP83014.1| peptidyl-tRNA hydrolase [Sulfitobacter sp. EE-36]
Length = 243
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +DRI H F WK K + EG+ R +L+K
Sbjct: 1 MKLIVGLGNPGAKYAGNRHNIGFMALDRIAQDHGFAGWKTKHNGLTVEGRFGADRVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN SGQS+ M F+KL + +V+HD++DL G ++ KTGGG AGHNGL+SI
Sbjct: 61 PETFMNNSGQSVQSAMRFHKL-EPADVIVLHDEIDLAPGKVKCKTGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F+ E+ +L ++ I+ LA+ + F
Sbjct: 120 HIGPDYDRVRLGVGHPGHKDAVPGYVLRDFAKAEQDWLDDVLRGISDGAAELARGDTAKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|83953527|ref|ZP_00962249.1| peptidyl-tRNA hydrolase [Sulfitobacter sp. NAS-14.1]
gi|83842495|gb|EAP81663.1| peptidyl-tRNA hydrolase [Sulfitobacter sp. NAS-14.1]
Length = 243
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +DRI H F WK K + EG+ R +L+K
Sbjct: 1 MKLIVGLGNPGAKYAGNRHNIGFMALDRIAQDHGFAGWKTKHNGLTVEGRFGADRVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN SGQS+ M F+KL + +V+HD++DL G ++ KTGGG AGHNGL+SI
Sbjct: 61 PETFMNNSGQSVQSAMRFHKL-EPADVIVLHDEIDLAPGKVKCKTGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F+ E+ +L ++ I+ LA+ + F
Sbjct: 120 HIGPDYDRVRLGVGHPGHKDAVPGYVLRDFAKAEQDWLDDVLRGISDGAAELARGDTAKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|152990134|ref|YP_001355856.1| peptidyl-tRNA hydrolase [Nitratiruptor sp. SB155-2]
gi|151421995|dbj|BAF69499.1| peptidyl-tRNA hydrolase, PTH1 family [Nitratiruptor sp. SB155-2]
Length = 188
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 109/176 (61%), Gaps = 8/176 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISE-GQLDGLRTIL 58
M ++ GLGNPG +Y NRHNIGFM +DR I KK+F E+ + G + +L
Sbjct: 1 MHLIVGLGNPGPKYERNRHNIGFMVVDRLIERLKPTSISKKEFKGELYKYGSI-----LL 55
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSGQS+ V NFYK+ LEN +VIHDDLDL G LR K GG GHNGLKSI
Sbjct: 56 LKPLTYMNLSGQSVQAVKNFYKI-ELENIIVIHDDLDLGLGALRFKKGGSSGGHNGLKSI 114
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
GK Y R+R GIGRP ++R+VL +F+ E + P+ID A + L K
Sbjct: 115 DALVGKEYIRIRFGIGRPQRKEEVVRYVLSDFTQKEFECIAPVIDKAAEAALALTK 170
>gi|294011769|ref|YP_003545229.1| peptidyl-tRNA hydrolase [Sphingobium japonicum UT26S]
gi|292675099|dbj|BAI96617.1| peptidyl-tRNA hydrolase [Sphingobium japonicum UT26S]
Length = 189
Score = 157 bits (398), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 111/185 (60%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I GLGNPG +Y NRHN+GFM +D I H FP KK+F + EG++ + +L+K
Sbjct: 1 MQIWVGLGNPGTQYAMNRHNVGFMAVDLIADMHRFPPPKKQFQGWVQEGRIGTEKIVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E M FYKL ++ V HD+LDL +++K GGG+AGHNGL+S
Sbjct: 61 PATFMNESGRSVGEAMRFYKLAP-QDVTVFHDELDLAPMKVKVKRGGGNAGHNGLRSTDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++R+RIGIG P + +VLGN+ E L ++ I LA+ +D F
Sbjct: 120 HIGAEFRRVRIGIGHPGHKDRVHGYVLGNYHKSEMNALADMLGAIGAEAEWLARGDDARF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNEVA 184
>gi|149184485|ref|ZP_01862803.1| peptidyl-tRNA hydrolase [Erythrobacter sp. SD-21]
gi|148831805|gb|EDL50238.1| peptidyl-tRNA hydrolase [Erythrobacter sp. SD-21]
Length = 189
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I GLGNPG +Y +RHNIGFM D + H F +KKF + EG++ G + +L+K
Sbjct: 1 MQIWTGLGNPGPQYAMHRHNIGFMVCDALAEIHGFGPVQKKFSGWVQEGRIGGEKIVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E M FYKL ++E+ V HD+LDL ++++ GGG AGHNGL+SI++
Sbjct: 61 PATYMNESGRAVGEAMRFYKL-DIEDLTVFHDELDLAPFKVKVRRGGGLAGHNGLRSINQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++R+RIGIG P + HVLGN++ E L ++ + LA +DV F
Sbjct: 120 HLGPDFRRVRIGIGHPGSKDRVTGHVLGNYAKSEMDALADMLGAMGAEAEWLATGDDVRF 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNDIA 184
>gi|310815222|ref|YP_003963186.1| peptidyl-tRNA hydrolase [Ketogulonicigenium vulgare Y25]
gi|308753957|gb|ADO41886.1| peptidyl-tRNA hydrolase [Ketogulonicigenium vulgare Y25]
Length = 241
Score = 157 bits (397), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 117/184 (63%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F ++ +F I+EG+L + +L+K
Sbjct: 1 MKLFVGLGNPGAKYAGNRHNIGFMAMDYIAGDHGFTPFRARFQGLIAEGRLGDEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M F+KL ++ +V HD+LDL G ++ KTGGG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVGEAMRFHKL-TPDDVVVFHDELDLAPGRIKAKTGGGHAGHNGLRSIHG 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+G+G P + +VL +F+ ++ +L ++ I+ LLA + F
Sbjct: 120 HIGEAYHRVRMGVGHPGHKDAVASYVLHDFAKADQQWLDDMLRGISDGAALLAAGDQARF 179
Query: 181 LNHI 184
LN +
Sbjct: 180 LNAV 183
>gi|307292918|ref|ZP_07572764.1| peptidyl-tRNA hydrolase [Sphingobium chlorophenolicum L-1]
gi|306880984|gb|EFN12200.1| peptidyl-tRNA hydrolase [Sphingobium chlorophenolicum L-1]
Length = 189
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 109/185 (58%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I GLGNPG +Y NRHN+GFM D I H F KK+F + EG++ + +LIK
Sbjct: 1 MQIWVGLGNPGTQYAMNRHNVGFMAADVIADMHRFSPPKKQFQGWVQEGRIGSEKIVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E M FYKL E+ V HD+LDL +++K GGG+AGHNGL+S
Sbjct: 61 PATFMNESGRSVGEAMRFYKLAP-EDVTVFHDELDLAPMKVKVKRGGGNAGHNGLRSTDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++R+RIGIG P + +VLGN+ E L ++ I LAK +D F
Sbjct: 120 HIGAEFRRVRIGIGHPGHKDRVHGYVLGNYHKSETDALADMLGAIGAEAEWLAKGDDARF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNEVA 184
>gi|94498283|ref|ZP_01304843.1| peptidyl-tRNA hydrolase [Sphingomonas sp. SKA58]
gi|94422285|gb|EAT07326.1| peptidyl-tRNA hydrolase [Sphingomonas sp. SKA58]
Length = 188
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 113/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I AGLGNPG +Y +RHN+GFM ID I H F A KK+F EG++ + +L+K
Sbjct: 1 MQIWAGLGNPGTQYAMHRHNVGFMAIDLIADMHRFSAPKKQFQGWSQEGRIGNDKILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E M FYKL ++ V HD+LDL +++K GGG+AGHNGL+S
Sbjct: 61 PATFMNESGRSIGEAMRFYKL-TPQDVTVFHDELDLVPMKVKVKRGGGNAGHNGLRSTDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++R+RIGIG P + +VLGN++ E L ++ I P LA +D F
Sbjct: 120 HIGNDFRRVRIGIGHPGHKDKVHGYVLGNYAKSEMDALADMLGAIGAEAPWLAAGDDARF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNEVA 184
>gi|83859405|ref|ZP_00952926.1| peptidyl-tRNA hydrolase [Oceanicaulis alexandrii HTCC2633]
gi|83852852|gb|EAP90705.1| peptidyl-tRNA hydrolase [Oceanicaulis alexandrii HTCC2633]
Length = 194
Score = 157 bits (396), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 114/189 (60%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG----LRT 56
M ++ GLGNPG +Y NRHN+GFM +D I WK +F + +EG ++ +
Sbjct: 1 MHLIVGLGNPGGKYAGNRHNVGFMALDAIAEDWRLGPWKSRFSGQTAEGVVETGQGPKKV 60
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L+KPQTF N SG+++ E FYK+ + +V HD+LDL G RLKTGGG AG+NGL+
Sbjct: 61 LLLKPQTFYNESGRAVAEAARFYKI-EADKIMVFHDELDLAPGKFRLKTGGGHAGNNGLR 119
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
S ++KR RIGIG P D + VLG+FS E +L P++D IAR+ PL+ +
Sbjct: 120 STKAHIEGDFKRGRIGIGHPGDKNQVTNWVLGDFSKAEGEWLGPLLDAIARAFPLILEGN 179
Query: 177 DVSFLNHIV 185
+ +F +
Sbjct: 180 EDAFQTRVT 188
>gi|332188708|ref|ZP_08390422.1| peptidyl-tRNA hydrolase [Sphingomonas sp. S17]
gi|332011272|gb|EGI53363.1| peptidyl-tRNA hydrolase [Sphingomonas sp. S17]
Length = 191
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +RHN+GFM ID I H F KK+F EG++ G + +L+K
Sbjct: 1 MQVWTGLGNPGPQYAMHRHNVGFMAIDAIAEVHGFGPVKKQFQGWTQEGRIGGQKILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E + FYKL +E V HD+LD+ +++KTGGG AGHNGL+SI +
Sbjct: 61 PATFMNESGRSVGEALRFYKL-GVEALTVFHDELDIVPFRVKVKTGGGTAGHNGLRSIDQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++R+R+GIG P + +VLGN++ E L ++ +A LA+ +DV F
Sbjct: 120 HLGPDFRRVRLGIGHPGHKDRVTGYVLGNYAKAEIEPLSDLLGALAAEAHWLAEGDDVRF 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 VNDIA 184
>gi|288958835|ref|YP_003449176.1| peptidyl-tRNA hydrolase, PTH1 family [Azospirillum sp. B510]
gi|288911143|dbj|BAI72632.1| peptidyl-tRNA hydrolase, PTH1 family [Azospirillum sp. B510]
Length = 190
Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 123/185 (66%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG+EY NRHNIGFM ++ I H F WKK+F + +EG + G + + ++
Sbjct: 1 MLLLVGLGNPGNEYARNRHNIGFMAVETIARRHRFTPWKKRFQGQTAEGAVAGDKVLALE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS++ + FYKL EN +VIHD+LDL G +R+K GGG GHNGL+SI
Sbjct: 61 PATFMNLSGQSVVAALQFYKL-KPENVVVIHDELDLPPGKIRVKKGGGHGGHNGLRSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
GK Y R+R+GIG P + + +VL +F+ ++ ++ P++D ++ +LPL+ + F
Sbjct: 120 HIGKEYWRIRLGIGHPGNKDLVSGYVLHDFAKADQGWIDPLLDAVSDNLPLIVDGQPELF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNKVT 184
>gi|148260672|ref|YP_001234799.1| peptidyl-tRNA hydrolase [Acidiphilium cryptum JF-5]
gi|166199297|sp|A5FZ48|PTH_ACICJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146402353|gb|ABQ30880.1| peptidyl-tRNA hydrolase [Acidiphilium cryptum JF-5]
Length = 192
Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 116/190 (61%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP NRHNIGFM ID I H F W+K+F +SEG + G + + +K
Sbjct: 1 MKLWVGLGNPEPGMARNRHNIGFMAIDVIADRHGFAPWRKRFSGLVSEGSVGGEKIVALK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ F+KLP + V HD+LDL G +R+K GGG AGHNGL+SI
Sbjct: 61 PLTYMNESGRAVQPASAFFKLPP-DAVTVFHDELDLIPGKVRVKRGGGAAGHNGLRSIDR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++Y R+R+GIG P D A + HVLGNF+ + +L+ ++ ++ + PLLA +
Sbjct: 120 TLGTQDYWRVRLGIGHPGDKARVHGHVLGNFAKTDEDWLVDTLEAVSDAAPLLAAGKPED 179
Query: 180 FLNHIVSVRK 189
F+ + + K
Sbjct: 180 FMTKVALLTK 189
>gi|326403866|ref|YP_004283948.1| peptidyl-tRNA hydrolase [Acidiphilium multivorum AIU301]
gi|325050728|dbj|BAJ81066.1| peptidyl-tRNA hydrolase [Acidiphilium multivorum AIU301]
Length = 192
Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 116/190 (61%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP NRHNIGFM ID I H F W+K+F +SEG + G + + +K
Sbjct: 1 MKLWVGLGNPEPGMARNRHNIGFMAIDVIADRHGFAPWRKRFSGLVSEGSIGGEKIVALK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ F+KLP + V HD+LDL G +R+K GGG AGHNGL+SI
Sbjct: 61 PLTYMNESGRAVQPASAFFKLPP-DAVTVFHDELDLIPGKVRVKRGGGAAGHNGLRSIDR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++Y R+R+GIG P D A + HVLGNF+ + +L+ ++ ++ + PLLA +
Sbjct: 120 TLGTQDYWRVRLGIGHPGDKARVHGHVLGNFAKTDEDWLVDTLEAVSDAAPLLAAGKPED 179
Query: 180 FLNHIVSVRK 189
F+ + + K
Sbjct: 180 FMTKVALLTK 189
>gi|118591924|ref|ZP_01549319.1| peptidyl-tRNA hydrolase [Stappia aggregata IAM 12614]
gi|118435567|gb|EAV42213.1| peptidyl-tRNA hydrolase [Stappia aggregata IAM 12614]
Length = 275
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 122/186 (65%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG Y NRHNIGFM +D IH H F WK +F ++SEG+L + +L+
Sbjct: 9 MKLIVGLGNPGARYEGNRHNIGFMAVDEIHRRHSGFQPWKARFQGQVSEGRLGSEKVLLL 68
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG+S+ E M FYK+ E+ +VI+D+LDL R+K GGG GHNGL+SI+
Sbjct: 69 KPSTYMNESGRSVGEAMRFYKI-EPEDIVVIYDELDLPPAKFRMKVGGGHGGHNGLRSIT 127
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G++Y+RLR+GIG P D + +VLG+F+ +R +L P++ +A LLA+ +D
Sbjct: 128 AHIGESYRRLRLGIGHPGDKKLVSNYVLGDFAKADRDWLEPLLMEVADQAGLLAEGKDSQ 187
Query: 180 FLNHIV 185
F N +
Sbjct: 188 FANKLT 193
>gi|307944187|ref|ZP_07659528.1| peptidyl-tRNA hydrolase [Roseibium sp. TrichSKD4]
gi|307772533|gb|EFO31753.1| peptidyl-tRNA hydrolase [Roseibium sp. TrichSKD4]
Length = 241
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 121/186 (65%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG Y NRHNIGFM ++ IH H F W+ +F AE+SEG+L + +L+
Sbjct: 1 MKLIVGLGNPGSNYAGNRHNIGFMAVNEIHRVHSSFAPWRARFQAEVSEGRLGSEKALLM 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG+++ E M FYK+ E+ VI+D+LDL R+K GGG GHNGL+SIS
Sbjct: 61 KPSTYMNESGRAVGEAMRFYKI-EPEDIAVIYDELDLPPAKFRMKAGGGHGGHNGLRSIS 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G++Y+RLR+GIG P D + +VLG+F+ + +L P++ IA + +LA +D
Sbjct: 120 AHIGQDYRRLRLGIGHPGDKKLVSNYVLGDFAKADSDWLEPLLREIADNADMLAAGQDSQ 179
Query: 180 FLNHIV 185
F N +
Sbjct: 180 FANKLT 185
>gi|304391296|ref|ZP_07373240.1| peptidyl-tRNA hydrolase [Ahrensia sp. R2A130]
gi|303296652|gb|EFL91008.1| peptidyl-tRNA hydrolase [Ahrensia sp. R2A130]
Length = 246
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 119/185 (64%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG + RHN+GF+ +D I + H F WK +F A EG++ + +L+K
Sbjct: 1 MLIIAGLGNPGPTHEHQRHNVGFVAVDAIAAEHNFSPWKPRFQALACEGRIGNEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E FYK+ + + ++D+LDL G LR+KTGGG GHNG++SI
Sbjct: 61 PTTFMNESGRSVGEAARFYKI-DEAAVIALYDELDLAPGKLRIKTGGGAGGHNGIRSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
GKNY+R+RIGIG P + HVLGNF+ + +L P++D IAR+ +L +D F
Sbjct: 120 HLGKNYRRVRIGIGHPGHKDRVTGHVLGNFAKADHDWLDPLLDEIARNADMLVSGDDAGF 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNRIA 184
>gi|222054665|ref|YP_002537027.1| Aminoacyl-tRNA hydrolase [Geobacter sp. FRC-32]
gi|254783870|sp|B9M5U5|PTH_GEOSF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|221563954|gb|ACM19926.1| Aminoacyl-tRNA hydrolase [Geobacter sp. FRC-32]
Length = 191
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 113/173 (65%), Gaps = 3/173 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
I+ GLGNPG +Y RHN GFM +DR+ KK F EG G R IL+KPQ
Sbjct: 5 IIVGLGNPGPKYQWTRHNAGFMVLDRLSHLAGIAISKKTFSGVCGEGNWQGERLILLKPQ 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S E + F+KLP +E+ +VIHDDLD+ FG ++LK GGG AGHNGL+S++++
Sbjct: 65 TFMNLSGRSAAEAIRFHKLP-IEDLIVIHDDLDIPFGRVKLKQGGGHAGHNGLRSLAQEL 123
Query: 123 GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G ++ R+R+GIGRP ++ +VL NFS E L ++D + + +LA+
Sbjct: 124 GSGDFVRVRVGIGRPVH-GDVVNYVLNNFSPEEMASLPRLLDGVVDLVEMLAR 175
>gi|296114647|ref|ZP_06833300.1| peptidyl-tRNA hydrolase [Gluconacetobacter hansenii ATCC 23769]
gi|295979003|gb|EFG85728.1| peptidyl-tRNA hydrolase [Gluconacetobacter hansenii ATCC 23769]
Length = 177
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 111/173 (64%), Gaps = 2/173 (1%)
Query: 15 CENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLE 74
NRHN+GFM +DRI H F W+K+F E+SEGQ+ + +L+KP T+MNLSG+S+ +
Sbjct: 2 SRNRHNVGFMAVDRIAERHGFAPWRKRFRGEVSEGQIGRHKVMLLKPLTYMNLSGESVQQ 61
Query: 75 VMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-KNYKRLRIGI 133
FYKL + + HD+LDL G +R+K GGG AGHNGL+S+ G ++Y R+RIGI
Sbjct: 62 AAAFYKL-SADAITAFHDELDLAPGRIRVKRGGGAAGHNGLRSMDRMLGTQDYWRVRIGI 120
Query: 134 GRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVS 186
G P + HVLG+FS +R +L P++D ++ + +LA + F+ + S
Sbjct: 121 GHPGTRERVTGHVLGDFSRDDRLWLDPMLDALSDTAAILADGQPELFMTRMAS 173
>gi|328542807|ref|YP_004302916.1| Peptidyl-tRNA hydrolase [Polymorphum gilvum SL003B-26A1]
gi|326412553|gb|ADZ69616.1| Peptidyl-tRNA hydrolase [Polymorphum gilvum SL003B-26A1]
Length = 249
Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 123/186 (66%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG +Y NRHNIGFM D IH H F W+ +FHAE++EGQL + +L+
Sbjct: 1 MKLIVGLGNPGGKYERNRHNIGFMAADAIHRRHAGFGPWRARFHAEVAEGQLGAEKILLM 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG+++ E + F+KL E+ LVI+D+LDL R+K GGG GHNGL+SIS
Sbjct: 61 KPATYMNESGRAVGEAVRFFKLAP-EDVLVIYDELDLPPAKFRMKAGGGHGGHNGLRSIS 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G Y+RLR+GIG P D + +VLG+F+ + +L P+++ IA + LLA+ +D
Sbjct: 120 AHIGDAYRRLRLGIGHPGDKKLVSNYVLGDFAKVDAEWLDPLLEAIADNAGLLAEGKDSQ 179
Query: 180 FLNHIV 185
F N +
Sbjct: 180 FANKLT 185
>gi|15604455|ref|NP_220973.1| peptidyl-tRNA hydrolase [Rickettsia prowazekii str. Madrid E]
gi|6647700|sp|Q9ZCV4|PTH_RICPR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|3861149|emb|CAA15049.1| PEPTIDYL-TRNA HYDROLASE (pth) [Rickettsia prowazekii]
Length = 185
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 120/186 (64%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHNIGF+ I+RI S +H + KKKF+ EI+E +D + I I
Sbjct: 1 MILVIGLGNPGTEYQYTRHNIGFIAIERIASKYHLSFSIKKKFNCEIAEAVIDRQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + E VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVILVKTYYNIK-YEKVFVIHDDIDLEIGRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y R+RIGIGRP + + +VL NFS E + IDNIA + L+ + +
Sbjct: 120 VVIGNHYNRIRIGIGRPKNNHDVADYVLNNFSESEYKIAMQSIDNIANNFGLILEHKLAE 179
Query: 180 FLNHIV 185
F N IV
Sbjct: 180 FTNKIV 185
>gi|209965202|ref|YP_002298117.1| peptidyl-tRNA hydrolase [Rhodospirillum centenum SW]
gi|226709063|sp|B6ITK3|PTH_RHOCS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|209958668|gb|ACI99304.1| peptidyl-tRNA hydrolase pth [Rhodospirillum centenum SW]
Length = 227
Score = 154 bits (388), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY RHN+GFM +D +H + F WK++F +EG + G + +L+K
Sbjct: 1 MRLVVGLGNPGPEYERQRHNVGFMAVDLLHRRYGFGPWKRRFQGLTAEGSVAGEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQ+ E M FYK+ + LV HD+LDL G +R+K GGG GHNGL+S+ +
Sbjct: 61 PATFMNLSGQAAGEAMRFYKI-TPDQVLVFHDELDLPPGRVRVKRGGGHGGHNGLRSLDD 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
GK+Y R+RIGIG P + VL NF+ E +L P++D + PLL E +
Sbjct: 120 HVGKDYWRIRIGIGHPGSKERVTGWVLSNFAKAEEQWLEPLLDALVAEAPLLVAGEPEKY 179
Query: 181 LNHIV 185
+ I
Sbjct: 180 ASRIA 184
>gi|300024019|ref|YP_003756630.1| peptidyl-tRNA hydrolase [Hyphomicrobium denitrificans ATCC 51888]
gi|299525840|gb|ADJ24309.1| peptidyl-tRNA hydrolase [Hyphomicrobium denitrificans ATCC 51888]
Length = 247
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 122/187 (65%), Gaps = 1/187 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGF+ +DRI H F W+KKF +SEG + R +L+K
Sbjct: 1 MKLFVGLGNPGEKYSANRHNIGFLALDRIAERHGFAPWRKKFQGLVSEGTIGTDRVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MN SG+S+ E F K+P + + V HD+LDL G +++K GGG+AGHNGL+SIS
Sbjct: 61 PETYMNESGRSVGEAQRFLKIP-ISDVYVFHDELDLAPGKVKVKAGGGNAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+YKR+R+GIG P ++ +VL +F+ ER +L ++D ++ + P LAK +D F
Sbjct: 120 HLENDYKRVRLGIGHPGAKDAVVHYVLNDFAKSERGWLSDLLDAVSDAAPYLAKGDDSRF 179
Query: 181 LNHIVSV 187
L+ +
Sbjct: 180 LSDVAKT 186
>gi|310777820|ref|YP_003966153.1| peptidyl-tRNA hydrolase [Ilyobacter polytropus DSM 2926]
gi|309747143|gb|ADO81805.1| peptidyl-tRNA hydrolase [Ilyobacter polytropus DSM 2926]
Length = 189
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 110/179 (61%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHNIGF ID + +++KF I E + + L+K
Sbjct: 1 MKLIVGLGNPGEKYSKTRHNIGFEVIDMLAEDLKVSGFREKFQGLIGETVIKDEKVFLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG S+ EV+ FYK+ E+ +VI+DD+DLD G L++K G AGHNG+KSI
Sbjct: 61 PQTFMNLSGNSINEVIKFYKIDPEEDLIVIYDDMDLDLGQLKIKVKGSPAGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+N+ R++ GIG+ + VLG FS E + P+I+N +++ L +D+S
Sbjct: 121 HIGENFLRVKCGIGKAKSREETVNFVLGRFSKEESNEVDPMIENASKAAQSLITAKDIS 179
>gi|114328981|ref|YP_746138.1| peptidyl-tRNA hydrolase [Granulibacter bethesdensis CGDNIH1]
gi|119390946|sp|Q0BPN7|PTH_GRABC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|114317155|gb|ABI63215.1| peptidyl-tRNA hydrolase [Granulibacter bethesdensis CGDNIH1]
Length = 194
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 109/186 (58%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ + GLGNP RHNIGFM +D I H F W+ +F +EG L G + IL+K
Sbjct: 4 LLLWTGLGNPEPGMALQRHNIGFMAVDAIAQRHGFTPWRNRFKGLTAEGTLAGRKIILLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ F+KLP E HD+LDL G +R+K GGG AGHNGL+S+
Sbjct: 64 PMTYMNASGESVQPATAFFKLPP-EAVSAFHDELDLAPGKVRVKRGGGAAGHNGLRSMDR 122
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G Y R+R+GIG P + HVLGNF+ ++ +L P+++ +A + PLLA+
Sbjct: 123 MLGTPEYWRVRLGIGHPGSKERVHGHVLGNFAKSDQEWLGPLLEAVADAAPLLAEGRAED 182
Query: 180 FLNHIV 185
F+ I
Sbjct: 183 FMTRIA 188
>gi|42520075|ref|NP_965990.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|68052975|sp|Q73II8|PTH_WOLPM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|42409812|gb|AAS13924.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 182
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 121/185 (65%), Gaps = 3/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y HNIGF+ +D I + F ++ KK I+ G ++ + +LIK
Sbjct: 1 MHLIVGLGNPGSQYELTHHNIGFIVVDTICKYWNFHSFSKKADYLITSGIINDNKIMLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +FMN SG + ++ NFYKL +L+N +VIHDD DL+ G +++K GG AGHNGLKSI
Sbjct: 61 PYSFMNNSGIPVAKIQNFYKL-SLDNIVVIHDDADLELGRIKVKKGGSSAGHNGLKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLR G+GRP D + +VL FS+ Y + P+++ IA+++ L+ + ++ +F
Sbjct: 120 FIGNDYWRLRFGVGRPEDQRSLADYVLSKFSN--FYNVTPLVEKIAKNIHLMLQGDNTAF 177
Query: 181 LNHIV 185
+N IV
Sbjct: 178 INLIV 182
>gi|20808916|ref|NP_624087.1| peptidyl-tRNA hydrolase [Thermoanaerobacter tengcongensis MB4]
gi|22095992|sp|Q8R757|PTH_THETN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|20517576|gb|AAM25691.1| Peptidyl-tRNA hydrolase [Thermoanaerobacter tengcongensis MB4]
Length = 185
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 111/170 (65%), Gaps = 3/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG EY RHN+GFM ID + + KF + + EG G + IL+K
Sbjct: 1 MYIIAGLGNPGKEYEGTRHNVGFMVIDALSKKLGIEVSRLKFKSLMGEGHFKGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG++L + +NFYK+P LEN +V++DD DL+ G +R++ G GHNG+ SI
Sbjct: 61 PQTFMNLSGEALYDAVNFYKIP-LENVIVVYDDKDLEVGKIRIRRKGSSGGHNGMNSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+++ R+RIGIG+P D ++RHVLG FS E+ + ++ A ++
Sbjct: 120 LLNSEDFPRVRIGIGKPED-GDLVRHVLGRFSDEEKKVIDEAVERAAEAV 168
>gi|302383774|ref|YP_003819597.1| peptidyl-tRNA hydrolase [Brevundimonas subvibrioides ATCC 15264]
gi|302194402|gb|ADL01974.1| peptidyl-tRNA hydrolase [Brevundimonas subvibrioides ATCC 15264]
Length = 204
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 116/187 (62%), Gaps = 1/187 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM D I F + KF + I EG+++G + +L+K
Sbjct: 1 MIIIAGLGNPGPKYQHNRHNIGFMAADEIARRWRFGPERAKFQSVIREGEVEGTKVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG ++ E FYK+ + ++ HD++DL G R+K GGG AG NG++S+
Sbjct: 61 PQTFMNNSGNAVGEAARFYKIAPA-DVIIFHDEIDLAPGRFRMKKGGGAAGQNGIRSLIS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ G +++R R+G+G P + ++ HVLG+F E+ +L +++ A +LP +D +
Sbjct: 120 QLGPDFRRARMGVGHPGEAHLVMPHVLGDFHKAEQPWLQALLNACADALPFALAGDDERY 179
Query: 181 LNHIVSV 187
++ +
Sbjct: 180 QGEVLRL 186
>gi|292572229|gb|ADE30144.1| Peptidyl-tRNA hydrolase [Rickettsia prowazekii Rp22]
Length = 185
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 119/186 (63%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHNIGF+ I+RI S +H + KKKF+ EI E +D + I I
Sbjct: 1 MILVIGLGNPGTEYQYTRHNIGFIAIERIASKYHLSFSIKKKFNCEIVEAVIDRQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + E VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVILVKTYYNIK-YEKVFVIHDDIDLEIGRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y R+RIGIGRP + + +VL NFS E + IDNIA + L+ + +
Sbjct: 120 VVIGNHYNRIRIGIGRPKNNHDVADYVLNNFSESEYKIAMQSIDNIANNFGLILEHKLAE 179
Query: 180 FLNHIV 185
F N IV
Sbjct: 180 FTNKIV 185
>gi|85373994|ref|YP_458056.1| peptidyl-tRNA hydrolase [Erythrobacter litoralis HTCC2594]
gi|123409639|sp|Q2NAN2|PTH_ERYLH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|84787077|gb|ABC63259.1| peptidyl-tRNA hydrolase [Erythrobacter litoralis HTCC2594]
Length = 189
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I AGLGNPG +Y +RHN+GFM D I H F +KKF + EG++ + +L+K
Sbjct: 1 MQIWAGLGNPGPKYALHRHNVGFMACDVIAEMHGFEPVQKKFQGWVQEGRIGSEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E M FYKL ++ V +D+LDL+ +++K GGG AGHNG++S
Sbjct: 61 PGTFMNESGRAIGEAMRFYKL-EPQDVTVFYDELDLEPFKIKVKRGGGAAGHNGIRSTIR 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G++++R+RIGIG P + HVLGN++ E+ L+ ++ I LAK +D F
Sbjct: 120 HIGEDFRRIRIGIGHPGHKDRVTGHVLGNYAKAEQDDLVQMLGAIGAEAEWLAKGDDARF 179
Query: 181 LNHIV 185
++ I
Sbjct: 180 MSDIA 184
>gi|190571326|ref|YP_001975684.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018722|ref|ZP_03334530.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357598|emb|CAQ55039.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995673|gb|EEB56313.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 187
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 118/186 (63%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y HNIGF+ ID I+ + F ++ KK I+ G ++ + +LIK
Sbjct: 1 MHLIAGLGNPGSQYELTHHNIGFIVIDAIYKYWNFQSFSKKADYLITSGIINNNKVMLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +FMN SG + ++ NFYKL L+N +VIHDD DL FG +++K GG AGHNGLKSI
Sbjct: 61 PYSFMNNSGIPVAKIKNFYKLS-LDNIVVIHDDADLKFGRIKVKKGGSSAGHNGLKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLR G+GRP + +VL F + + LL ++ IA+++ L+ + + +F
Sbjct: 120 FIGNDYWRLRFGVGRPEGQKSLADYVLSKFENFDNVILL--VEKIAKNIHLMLQGDTTAF 177
Query: 181 LNHIVS 186
+N + S
Sbjct: 178 INSVES 183
>gi|148554298|ref|YP_001261880.1| peptidyl-tRNA hydrolase [Sphingomonas wittichii RW1]
gi|166229455|sp|A5V626|PTH_SPHWW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148499488|gb|ABQ67742.1| peptidyl-tRNA hydrolase [Sphingomonas wittichii RW1]
Length = 189
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 109/185 (58%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I GLGNPG +Y +RHN+GFM +D I H F WKK+F + G++ ++ +L+K
Sbjct: 1 MQIWVGLGNPGAQYAMHRHNVGFMAVDTIAEVHRFDPWKKQFQGWSATGRIGNVKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E M F+K + V HD+LDL +++KTGGG AGHNGL+S
Sbjct: 61 PATFMNESGRSVGEAMRFFKRET-GDVTVFHDELDLAPFKVKVKTGGGTAGHNGLRSTEA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++R+RIGIG P + +VLGN+ E L ++ IA LA +D F
Sbjct: 120 HIGNAFRRVRIGIGHPGHKDRVTGYVLGNYVKAELDPLAGMLGAIASEADWLASGDDARF 179
Query: 181 LNHIV 185
++ I
Sbjct: 180 MSEIA 184
>gi|237752464|ref|ZP_04582944.1| peptidyl-tRNA hydrolase [Helicobacter winghamensis ATCC BAA-430]
gi|229375953|gb|EEO26044.1| peptidyl-tRNA hydrolase [Helicobacter winghamensis ATCC BAA-430]
Length = 204
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 114/189 (60%), Gaps = 8/189 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
MF++ GLGNPG +Y NRHNIGF ID + S + K F E+ + + +L+
Sbjct: 1 MFLIVGLGNPGQKYQNNRHNIGFRVIDSLVQSLNAVKQSAKDFQGELYKSS----QMLLL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQTFMNLSG+S+ V+NFYK+ + +L+IHDDLDL FG ++ K GG GHNGLKSI
Sbjct: 57 KPQTFMNLSGKSVQSVLNFYKITD---FLIIHDDLDLPFGAIKFKFGGSSGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG Y R+R GIG+P + +I VL +F++ E +I + A + +AK E
Sbjct: 114 TLCGNAYYRIRYGIGKPTIKSQVIDWVLQDFNTTEEAHNQNLITHSANAALEIAKLESSD 173
Query: 180 FLNHIVSVR 188
L+ +S +
Sbjct: 174 NLSSQISSK 182
>gi|58696922|ref|ZP_00372423.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Drosophila
simulans]
gi|58698058|ref|ZP_00372982.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225629936|ref|YP_002726727.1| peptidyl-tRNA hydrolase [Wolbachia sp. wRi]
gi|254783898|sp|C0R594|PTH_WOLWR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|58535415|gb|EAL59490.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58536852|gb|EAL60060.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Drosophila
simulans]
gi|225591917|gb|ACN94936.1| peptidyl-tRNA hydrolase [Wolbachia sp. wRi]
Length = 182
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 120/185 (64%), Gaps = 3/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y HNIGF+ +D I + F + KK I+ G ++ + +LIK
Sbjct: 1 MHLIVGLGNPGSQYELTHHNIGFITVDAICKYWGFQLFSKKADYLITSGMINDNKIMLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +FMN SG + ++ NFYKL +L+N +VIHDD DL+ G +++K GG AGHNGLKSI
Sbjct: 61 PYSFMNNSGIPVAKIRNFYKL-SLDNIVVIHDDADLELGRIKVKKGGSSAGHNGLKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLR G+GRP D + +VL FS+ + + P+++ IA+++ L+ + ++ +F
Sbjct: 120 FIGNDYWRLRFGVGRPEDQRSLADYVLSKFSNFDN--VTPLVEKIAKNIHLMLQGDNTAF 177
Query: 181 LNHIV 185
+N IV
Sbjct: 178 INLIV 182
>gi|329890237|ref|ZP_08268580.1| peptidyl-tRNA hydrolase [Brevundimonas diminuta ATCC 11568]
gi|328845538|gb|EGF95102.1| peptidyl-tRNA hydrolase [Brevundimonas diminuta ATCC 11568]
Length = 201
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y +NRHNIGFM +D I F + KF + +++G+++G + +L+K
Sbjct: 1 MIIIAGLGNPGPKYEKNRHNIGFMAVDEIADRWRFGPSRAKFQSIVADGEVEGTKVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ E FYK+ E+ +V HD++DL G R+K GGG AG NG++S+
Sbjct: 61 PQTYMNESGRAVGEAARFYKV-KPEHVIVFHDEIDLAPGRFRMKKGGGAAGQNGIRSLIS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++R R+GIG P + + HVLG+F ++ +L ++ A +LP +D +
Sbjct: 120 HLGADFRRARMGIGHPGEPQLVHAHVLGDFHKADKPWLDAMLQACADALPFAVNGDDERY 179
Query: 181 LNHIV 185
++
Sbjct: 180 QGEVM 184
>gi|262066062|ref|ZP_06025674.1| aminoacyl-tRNA hydrolase [Fusobacterium periodonticum ATCC 33693]
gi|291380313|gb|EFE87831.1| aminoacyl-tRNA hydrolase [Fusobacterium periodonticum ATCC 33693]
Length = 191
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 107/165 (64%), Gaps = 2/165 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M IV GLGNPG +Y + RHNIGF+ +D + ++KF A ISE +DG + I K
Sbjct: 1 MKIVIGLGNPGKKYEKTRHNIGFIVVDSLRKKFNLTDEREKFQALISEKNIDGEKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG +L+E++NFYKL ++ +VI+DD+ LDFG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNALIEIINFYKLNPKKDIIVIYDDMSLDFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
G+ + R++ GIG + A I HVLG FS E+ L+ ++ I
Sbjct: 121 HIGEEFIRIKCGIGAKKEDA--IEHVLGEFSLTEQKELVDFLEKI 163
>gi|295838327|ref|ZP_06825260.1| aminoacyl-tRNA hydrolase [Streptomyces sp. SPB74]
gi|197695880|gb|EDY42813.1| aminoacyl-tRNA hydrolase [Streptomyces sp. SPB74]
Length = 200
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 112/178 (62%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQL-----DGL 54
++VAGLGNPG EY NRHN+GFM D + + +K+ + A++ EG+L
Sbjct: 11 WLVAGLGNPGPEYAGNRHNVGFMVADLLAA-RLGGRFKRAARAQAQVVEGRLGVPGVSST 69
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R ++ KP +FMNLSG + + +FYK+P LE + +HD+LD+D+G LRLK GGGD GHNG
Sbjct: 70 RVVIAKPLSFMNLSGGPVTALRDFYKVP-LERVVAVHDELDVDYGVLRLKLGGGDNGHNG 128
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 129 LKSMTKAMGPGYHRVRFGIGRPPGRTQVADFVLRDFSSAERKELDYFVDRAADAVEAL 186
>gi|254504345|ref|ZP_05116496.1| peptidyl-tRNA hydrolase [Labrenzia alexandrii DFL-11]
gi|222440416|gb|EEE47095.1| peptidyl-tRNA hydrolase [Labrenzia alexandrii DFL-11]
Length = 248
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 122/186 (65%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG +Y NRHNIGFM +D IH + F W+ +F ++SEG+L + +L+
Sbjct: 1 MRLIVGLGNPGGKYARNRHNIGFMALDEIHRRNSGFQPWRARFQGQVSEGRLGSEKVLLL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG+++ E M F+K+ E+ +VI+D+LDL R+K GGG GHNGL+SIS
Sbjct: 61 KPSTYMNESGRAVGEAMRFFKI-EPEDIVVIYDELDLPPAKFRMKKGGGHGGHNGLRSIS 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+ Y+RLR+GIG P D + +VLG+FS ++ +L P++ +A LLA+ +D
Sbjct: 120 AHIGQEYRRLRLGIGHPGDKKLVSNYVLGDFSKADQDWLNPLLAEVADQAGLLAEAKDSQ 179
Query: 180 FLNHIV 185
F N +
Sbjct: 180 FANKMT 185
>gi|58616811|ref|YP_196010.1| peptidyl-tRNA hydrolase [Ehrlichia ruminantium str. Gardel]
gi|58416423|emb|CAI27536.1| Peptidyl-tRNA hydrolase [Ehrlichia ruminantium str. Gardel]
Length = 215
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 113/187 (60%), Gaps = 3/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG EY RHN+GFM ID I FP +KKK +A IS G + + IL KP
Sbjct: 26 LLVGLGNPGKEYELTRHNVGFMIIDAIMHHFLFPDFKKKHNALISSGSIQSYKVILAKPY 85
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMN SG + ++ YK+P L+N +V HD+ D+DF T+R+K GGG+AGHNGLKSI
Sbjct: 86 TFMNNSGAPISSIVKLYKIP-LDNIIVFHDETDIDFCTIRIKKGGGNAGHNGLKSIDTLL 144
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
G++Y R+R GIG P + + HVL F++ + I NI + LL + + F N
Sbjct: 145 GRDYWRIRFGIGHPSNGYDLSYHVLSQFNNLNA--VNNTISNIIEHISLLFENDKSIFKN 202
Query: 183 HIVSVRK 189
+ + K
Sbjct: 203 KVKDLIK 209
>gi|328882995|emb|CCA56234.1| Peptidyl-tRNA hydrolase [Streptomyces venezuelae ATCC 10712]
Length = 198
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 112/178 (62%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD-----GL 54
+++ GLGNPG EY NRHNIGFM +D + + ++K+ K A++ EG++
Sbjct: 9 WLIVGLGNPGPEYAANRHNIGFMVVD-LLAERMRGSFKRAGKAQAQVVEGRMGPPGPASR 67
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R IL KP ++MNLSG + + +FYK+P N + +HD+LD+D+G LRLK GGGD GHNG
Sbjct: 68 RVILAKPMSYMNLSGGPVTALRDFYKVPT-ANVVAVHDELDIDYGVLRLKIGGGDNGHNG 126
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G Y R+R GIGRPP + VL +FSS ER L +D A S+ L
Sbjct: 127 LKSMTKAMGAEYHRVRCGIGRPPGRMQVADFVLKDFSSTERKDLDWFVDRAADSVECL 184
>gi|225677075|ref|ZP_03788080.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590897|gb|EEH12119.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 182
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 120/185 (64%), Gaps = 3/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y HNIGF+ +D I + F + KK I+ G ++ + +LIK
Sbjct: 1 MHLIVGLGNPGSQYELTHHNIGFITVDAICKYWGFQLFSKKADYLITSGIINDNKIMLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +FMN SG + ++ NFYKL +L+N +VIHDD DL+ G +++K GG AGHNGLKSI
Sbjct: 61 PYSFMNNSGIPVAKIRNFYKL-SLDNIVVIHDDADLELGRIKIKKGGSSAGHNGLKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLR G+GRP D + +VL FS+ + + P+++ IA+++ L+ + ++ +F
Sbjct: 120 FIGNDYWRLRFGVGRPEDQRSLADYVLSKFSNFDN--VTPLVEKIAKNIHLMLQGDNTAF 177
Query: 181 LNHIV 185
+N IV
Sbjct: 178 INLIV 182
>gi|68052869|sp|Q5FFA3|PTH_EHRRG RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 193
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 114/189 (60%), Gaps = 3/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ ++ GLGNPG EY RHN+GFM ID I FP +KKK +A IS G + + IL K
Sbjct: 2 LHLLVGLGNPGKEYELTRHNVGFMIIDAIMHHFLFPDFKKKHNALISSGSIQSYKVILAK 61
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + ++ YK+P L+N +V HD+ D+DF T+R+K GGG+AGHNGLKSI
Sbjct: 62 PYTFMNNSGAPISSIVKLYKIP-LDNIIVFHDETDIDFCTIRIKKGGGNAGHNGLKSIDT 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G++Y R+R GIG P + + HVL F++ + I NI + LL + + F
Sbjct: 121 LLGRDYWRIRFGIGHPSNGYDLSYHVLSQFNNLNA--VNNTISNIIEHISLLFENDKSIF 178
Query: 181 LNHIVSVRK 189
N + + K
Sbjct: 179 KNKVKDLIK 187
>gi|237738935|ref|ZP_04569416.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 2_1_31]
gi|229423535|gb|EEO38582.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 2_1_31]
Length = 191
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 107/165 (64%), Gaps = 2/165 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHNIGF+ +D + ++KF A ISE +DG + I K
Sbjct: 1 MKVVIGLGNPGKKYEKTRHNIGFIVVDSLRKKFNLTDEREKFQALISEKNIDGEKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG +L+E++NFYKL ++ +VI+DD+ LDFG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNALIEIVNFYKLDPKKDIIVIYDDMSLDFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
G+ + R++ GIG + A + HVLG FS E+ L+ ++ +
Sbjct: 121 HIGEEFIRIKCGIGAKKEDA--VEHVLGEFSQSEQKELVEFLEKL 163
>gi|326390844|ref|ZP_08212396.1| peptidyl-tRNA hydrolase [Thermoanaerobacter ethanolicus JW 200]
gi|325993103|gb|EGD51543.1| peptidyl-tRNA hydrolase [Thermoanaerobacter ethanolicus JW 200]
Length = 184
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 104/159 (65%), Gaps = 4/159 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG EY RHNIGFM ID + K KF + + EG G + IL+K
Sbjct: 1 MYVIAGLGNPGKEYEGTRHNIGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG++L + +NFYK+P LEN +VI+DD DLD G +R++T G GHNG+KSI
Sbjct: 61 PQTFMNSSGEALYDAVNFYKIP-LENVIVIYDDKDLDVGKIRIRTKGSSGGHNGMKSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+ + R+RIGIG+P + ++ HVLG F E+ +
Sbjct: 120 LLNSEEFPRVRIGIGKPQE--DLVSHVLGKFEESEKKLI 156
>gi|239981713|ref|ZP_04704237.1| peptidyl-tRNA hydrolase [Streptomyces albus J1074]
gi|291453573|ref|ZP_06592963.1| peptidyl-tRNA hydrolase [Streptomyces albus J1074]
gi|291356522|gb|EFE83424.1| peptidyl-tRNA hydrolase [Streptomyces albus J1074]
Length = 195
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 106/176 (60%), Gaps = 6/176 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS-----FHFFPAWKKKFHAEISEGQLDGLRT 56
++V GLGNPG EY NRHN+GFM D + S F + + A I R
Sbjct: 7 WLVVGLGNPGPEYAANRHNVGFMVADLLASRAGGKFKAHKSRAQVLEARIGAPGPGSRRI 66
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L KPQ++MNLSG + + +FYK+P E + +HD+LD+D+G LRLK GGGD GHNGLK
Sbjct: 67 VLAKPQSYMNLSGGPVTALRDFYKVPT-ERIVAVHDELDIDYGALRLKLGGGDNGHNGLK 125
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
S+++ G +Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 126 SMTKSLGPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELDYFVDRAADAVEAL 181
>gi|294784050|ref|ZP_06749372.1| aminoacyl-tRNA hydrolase [Fusobacterium sp. 1_1_41FAA]
gi|294479862|gb|EFG27641.1| aminoacyl-tRNA hydrolase [Fusobacterium sp. 1_1_41FAA]
Length = 191
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 108/169 (63%), Gaps = 2/169 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHNIGF+ +D + ++KF A ISE +DG + I K
Sbjct: 1 MKVVIGLGNPGKKYEKTRHNIGFIVVDSLRKKFNLTDEREKFQALISEKNIDGEKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG +L+E++NFYKL ++ +V++DD+ LDFG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNALIEIVNFYKLDPKKDIIVVYDDMSLDFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G+ + R++ GIG + A + HVLG FS E+ L+ ++ + +
Sbjct: 121 HIGEEFIRIKCGIGAKKEDA--VEHVLGEFSQSEQKELVEFLEKLNECI 167
>gi|315498172|ref|YP_004086976.1| peptidyl-tRNA hydrolase [Asticcacaulis excentricus CB 48]
gi|315416184|gb|ADU12825.1| peptidyl-tRNA hydrolase [Asticcacaulis excentricus CB 48]
Length = 202
Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 118/190 (62%), Gaps = 8/190 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDG----LR 55
MF+V GLGNPG +Y +NRHNIGFM IDR I S +F P +KKF +E++EG +D +
Sbjct: 1 MFLVVGLGNPGTQYAKNRHNIGFMFIDRLIDSANFGPV-RKKFQSEVAEGTVDTPTGPAK 59
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+ +KPQTFMNLSG ++LE FYK+ ++ LV HD+LDL G RLK GGG AGHNGL
Sbjct: 60 ILAMKPQTFMNLSGNAVLEAATFYKI-KPDHILVFHDELDLAPGRFRLKMGGGHAGHNGL 118
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+SI G N+ R R+GIG P + VL +F E + + + D ++LPL
Sbjct: 119 RSIMGHLGPNFVRGRMGIGHPGQKELVHSWVLSDFYKAEDW-VERLCDACVKALPLALLG 177
Query: 176 EDVSFLNHIV 185
E ++ ++
Sbjct: 178 ESEKYMTEVM 187
>gi|282865454|ref|ZP_06274505.1| peptidyl-tRNA hydrolase [Streptomyces sp. ACTE]
gi|282559498|gb|EFB65049.1| peptidyl-tRNA hydrolase [Streptomyces sp. ACTE]
Length = 197
Score = 150 bits (379), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 115/178 (64%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD-----GL 54
+++ GLGNPG EY NRHN+GFM D + + +K+ K A++ EG++
Sbjct: 8 WLIVGLGNPGPEYAANRHNVGFMVADLLAT-RIGGKFKRAQKAQAQVVEGRVGPPGPLSR 66
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L+KP ++MNLSG + + +FYK+P ++ + +HD+LD+D+GTLRLK GGGD GHNG
Sbjct: 67 RVVLVKPMSYMNLSGGPVTALRDFYKVPT-DHVVAVHDELDIDYGTLRLKLGGGDNGHNG 125
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G +Y R+R GIGRPP + VL +FSS ER L ++D A ++ L
Sbjct: 126 LKSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSGERKELGYLVDRAADAVEAL 183
>gi|296329172|ref|ZP_06871673.1| aminoacyl-tRNA hydrolase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296153528|gb|EFG94345.1| aminoacyl-tRNA hydrolase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 191
Score = 150 bits (379), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 107/165 (64%), Gaps = 2/165 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHNIGF+ +D + ++KF A +SE +DG + I K
Sbjct: 1 MKVVIGLGNPGKKYEKTRHNIGFIAVDNLRKKFNIIDEREKFQALVSEKNIDGEKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG S++E++NFYKL ++ +VI+DD+DL FG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNSVIEIVNFYKLDPKKDIIVIYDDMDLPFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
G+ + R++ GIG A + HVLG F+ E+ L I++NI
Sbjct: 121 HIGEEFIRIKCGIGAKEKDA--VEHVLGEFNQTEQKDLDEILENI 163
>gi|294813077|ref|ZP_06771720.1| Peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|294325676|gb|EFG07319.1| Peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 212
Score = 150 bits (379), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 111/178 (62%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD-----GL 54
+++ GLGNPG Y NRHN+GFM D + A+K+ K A++ EG++
Sbjct: 23 WLIVGLGNPGPGYAANRHNVGFMVADLLAE-RVGGAFKRAPKAQAQVVEGRIGPPGPASR 81
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L KP +FMNLSG ++ + +FYK+P E + IHD+LD+D+GTLRLK GGGD GHNG
Sbjct: 82 RVVLAKPMSFMNLSGGPVVALRDFYKVPT-ERIVAIHDELDIDYGTLRLKLGGGDNGHNG 140
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G +Y RLR GIGRPP + VL +FS ER L +D A ++ L
Sbjct: 141 LKSMTKAMGPDYHRLRFGIGRPPGRMQVADFVLKDFSGAERKELDYFVDRAADAVEAL 198
>gi|58578752|ref|YP_196964.1| peptidyl-tRNA hydrolase [Ehrlichia ruminantium str. Welgevonden]
gi|58417378|emb|CAI26582.1| Peptidyl-tRNA hydrolase [Ehrlichia ruminantium str. Welgevonden]
Length = 215
Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 114/189 (60%), Gaps = 3/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ ++ GLGNPG EY RHN+GFM ID I FP +KKK +A IS G + + IL K
Sbjct: 24 LHLLVGLGNPGKEYELTRHNVGFMIIDAIMHHFLFPDFKKKHNALISSGSIRSHKVILAK 83
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + ++ YK+P L+N +V HD+ D+DF T+R+K GGG+AGHNGLKSI
Sbjct: 84 PYTFMNNSGTPISSIVKLYKIP-LDNIIVFHDETDIDFCTIRIKKGGGNAGHNGLKSIDT 142
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G++Y R+R GIG P + + HVL F++ + I NI + LL + + F
Sbjct: 143 LLGRDYWRIRFGIGHPSNGYDLSYHVLSQFNNLNA--VNNTISNIIEHISLLFENDKSIF 200
Query: 181 LNHIVSVRK 189
N + + K
Sbjct: 201 KNKVKDLIK 209
>gi|21221563|ref|NP_627342.1| peptidyl-tRNA hydrolase [Streptomyces coelicolor A3(2)]
gi|256787245|ref|ZP_05525676.1| peptidyl-tRNA hydrolase [Streptomyces lividans TK24]
gi|289771144|ref|ZP_06530522.1| peptidyl-tRNA hydrolase [Streptomyces lividans TK24]
gi|22095998|sp|Q9K3T8|PTH_STRCO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|8894758|emb|CAB95918.1| peptidyl-tRNA hydrolase [Streptomyces coelicolor A3(2)]
gi|289701343|gb|EFD68772.1| peptidyl-tRNA hydrolase [Streptomyces lividans TK24]
Length = 200
Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 112/178 (62%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD-----GL 54
++VAGLGNPG EY NRHN+GFM D + +K+ K A++ EG++
Sbjct: 11 WLVAGLGNPGPEYASNRHNVGFMVADLLAE-RIGARFKRHGKAQAQVVEGRIGPPGPANR 69
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R IL KP +FMN+SG + + +FYK+P + N + +HD+LD+D+G LRLK GGGD GHNG
Sbjct: 70 RVILAKPMSFMNVSGGPVTALRDFYKVP-VGNIVAVHDELDIDYGVLRLKLGGGDNGHNG 128
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKSI++ G +Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 129 LKSITKSLGADYHRVRFGIGRPPGRMPVADFVLRDFSSTERKELDYFVDRAADAVEAL 186
>gi|254384996|ref|ZP_05000331.1| peptidyl-tRNA hydrolase [Streptomyces sp. Mg1]
gi|194343876|gb|EDX24842.1| peptidyl-tRNA hydrolase [Streptomyces sp. Mg1]
Length = 196
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 108/176 (61%), Gaps = 6/176 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD-----GLRT 56
+++ GLGNPG EY NRHNIGFM D + K A++ EG++ R
Sbjct: 8 WLIVGLGNPGAEYAGNRHNIGFMVADLLADRMRGKFKAHKARAQVVEGRMGPPGPANRRV 67
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L KP +FMNLSG + + +FYK+P LE + IHD+LD+D+ TLRLK GGGD GHNGLK
Sbjct: 68 VLAKPMSFMNLSGGPVTALRDFYKVP-LERIVAIHDELDIDYPTLRLKLGGGDNGHNGLK 126
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
S+++ G +Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 127 SMTKSMGPDYHRVRCGIGRPPGRMQVADFVLKDFSSTERKELDWFVDRAADAVECL 182
>gi|19704918|ref|NP_602413.1| peptidyl-tRNA hydrolase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|22095993|sp|Q8RIJ5|PTH_FUSNN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|19712813|gb|AAL93712.1| Peptidyl-tRNA hydrolase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 191
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 106/165 (64%), Gaps = 2/165 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHNIGF+ +D + ++KF A +SE +DG + I K
Sbjct: 1 MKVVIGLGNPGKKYEKTRHNIGFIAVDNLRKKFNISDEREKFQALVSEKNIDGEKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG S++E++NFYKL ++ +VI+DD+DL FG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNSVIEIINFYKLDPKKDIIVIYDDMDLSFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
G+ + R++ GIG A + HVLG F+ E+ L I++ I
Sbjct: 121 HIGEEFIRIKCGIGAKERDA--VEHVLGEFNQTEQKDLDEILEKI 163
>gi|57238822|ref|YP_179958.1| peptidyl-tRNA hydrolase [Ehrlichia ruminantium str. Welgevonden]
gi|68052874|sp|Q5HC85|PTH_EHRRW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|57160901|emb|CAH57806.1| peptidyl-tRNA hydrolase [Ehrlichia ruminantium str. Welgevonden]
Length = 193
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 114/189 (60%), Gaps = 3/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ ++ GLGNPG EY RHN+GFM ID I FP +KKK +A IS G + + IL K
Sbjct: 2 LHLLVGLGNPGKEYELTRHNVGFMIIDAIMHHFLFPDFKKKHNALISSGSIRSHKVILAK 61
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + ++ YK+P L+N +V HD+ D+DF T+R+K GGG+AGHNGLKSI
Sbjct: 62 PYTFMNNSGTPISSIVKLYKIP-LDNIIVFHDETDIDFCTIRIKKGGGNAGHNGLKSIDT 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G++Y R+R GIG P + + HVL F++ + I NI + LL + + F
Sbjct: 121 LLGRDYWRIRFGIGHPSNGYDLSYHVLSQFNNLNA--VNNTISNIIEHISLLFENDKSIF 178
Query: 181 LNHIVSVRK 189
N + + K
Sbjct: 179 KNKVKDLIK 187
>gi|159896843|ref|YP_001543090.1| aminoacyl-tRNA hydrolase [Herpetosiphon aurantiacus ATCC 23779]
gi|229485507|sp|A9B7I9|PTH_HERA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|159889882|gb|ABX02962.1| Aminoacyl-tRNA hydrolase [Herpetosiphon aurantiacus ATCC 23779]
Length = 206
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 106/172 (61%), Gaps = 1/172 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y NRHN+GF C+ H K+ A I+EG ++G R L +
Sbjct: 1 MFLIVGLGNPGEKYLNNRHNVGFQCVAEFARRHHLSFDGKRSDARIAEGLVNGQRVALAR 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S++ ++N+YK+ LV++DDLDL FGT++L+ G G G+ SI +
Sbjct: 61 PQTFMNDSGKSVVGLVNWYKIDPASELLVVYDDLDLPFGTIKLRNQGSSGGQRGMNSIIQ 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G + + RLR GIGRPP+ +I VLGN+++ ER L + D + L
Sbjct: 121 LLGTQKFARLRFGIGRPPEGWEVINFVLGNWNAAERETLPKLYDRAVEACEL 172
>gi|226309688|ref|YP_002769582.1| peptidyl-tRNA hydrolase [Brevibacillus brevis NBRC 100599]
gi|254783855|sp|C0ZHD7|PTH_BREBN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226092636|dbj|BAH41078.1| peptidyl-tRNA hydrolase [Brevibacillus brevis NBRC 100599]
Length = 189
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 117/190 (61%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHN GFM ID+I P + KF A + EG+++G + +L+K
Sbjct: 1 MKVIIGLGNPGKKYEDTRHNAGFMAIDKISDKWGIPVTQNKFRALVGEGRIEGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ EV+ FYKL ++ +VI+DDLDL G LRL+ G GHNG+KS+ +
Sbjct: 61 PQTYMNLSGESVAEVLKFYKLIP-DDLVVIYDDLDLPTGHLRLREKGSAGGHNGIKSMIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + +KR+++GI RP + +VL F ER + + A + + + +
Sbjct: 120 HLGTQEFKRIKVGISRPEPGRSVSDYVLNTFPVAERADIQEAVSLAADACAMWTRESFLK 179
Query: 180 FLNHIVSVRK 189
+NH S++K
Sbjct: 180 VMNHFNSLKK 189
>gi|162146758|ref|YP_001601217.1| peptidyl-tRNA hydrolase [Gluconacetobacter diazotrophicus PAl 5]
gi|161785333|emb|CAP54879.1| putative peptidyl-tRNA hydrolase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 179
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 114/172 (66%), Gaps = 2/172 (1%)
Query: 15 CENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLE 74
+RHN+GFM +DRI + H F W+K+F E++EG++ + +L+KP T+MNLSG+S+ +
Sbjct: 2 SRHRHNVGFMAVDRIATRHGFAPWRKRFRGEVAEGRVGTHKVLLLKPLTYMNLSGESVQQ 61
Query: 75 VMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-KNYKRLRIGI 133
FYK+P +E+ HD+LDL G +R+K GGG AGHNGL+S+ + G ++Y R+RIGI
Sbjct: 62 AAAFYKIP-VESITAFHDELDLAPGRVRVKRGGGAAGHNGLRSMDKMLGSQDYWRVRIGI 120
Query: 134 GRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIV 185
G P + HVLG+F+ ++ +L ++D ++ + P+LA + F+ +
Sbjct: 121 GHPGVRERVTGHVLGDFAKSDQDWLERMLDAMSDTAPVLADGQPELFMTKMA 172
>gi|89056083|ref|YP_511534.1| peptidyl-tRNA hydrolase [Jannaschia sp. CCS1]
gi|119390951|sp|Q28LA3|PTH_JANSC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|88865632|gb|ABD56509.1| peptidyl-tRNA hydrolase [Jannaschia sp. CCS1]
Length = 239
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIG+M +DR+ H F W+ KF E+SEG LDG + +L+K
Sbjct: 1 MQLWVGLGNPGAKYAGNRHNIGWMAVDRVAEDHGFAPWRAKFQGEVSEGVLDGEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E M FYKL + + V HD++DL +R+K GGG AGHNGL+SI +
Sbjct: 61 PTTFMNLSGQSVGEAMRFYKL-DSTDVTVWHDEIDLAPAKIRVKAGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F+ + +L ++ ++ P LA+ + F
Sbjct: 120 HIGPHYDRVRLGVGHPGHKDRVPGYVLSDFAKADAGWLDDVLRGVSDGAPHLARGDGGKF 179
Query: 181 LNHIV 185
LN +
Sbjct: 180 LNAVA 184
>gi|254388784|ref|ZP_05004016.1| peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|326441621|ref|ZP_08216355.1| peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197702503|gb|EDY48315.1| peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 199
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 111/178 (62%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD-----GL 54
+++ GLGNPG Y NRHN+GFM D + A+K+ K A++ EG++
Sbjct: 10 WLIVGLGNPGPGYAANRHNVGFMVADLLAE-RVGGAFKRAPKAQAQVVEGRIGPPGPASR 68
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L KP +FMNLSG ++ + +FYK+P E + IHD+LD+D+GTLRLK GGGD GHNG
Sbjct: 69 RVVLAKPMSFMNLSGGPVVALRDFYKVPT-ERIVAIHDELDIDYGTLRLKLGGGDNGHNG 127
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G +Y RLR GIGRPP + VL +FS ER L +D A ++ L
Sbjct: 128 LKSMTKAMGPDYHRLRFGIGRPPGRMQVADFVLKDFSGAERKELDYFVDRAADAVEAL 185
>gi|302530285|ref|ZP_07282627.1| peptidyl-tRNA hydrolase [Streptomyces sp. AA4]
gi|302439180|gb|EFL10996.1| peptidyl-tRNA hydrolase [Streptomyces sp. AA4]
Length = 197
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 111/176 (63%), Gaps = 2/176 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ ++AGLGNPG +Y NRHN+GFM +D + + AE+ EG+L G R +L+K
Sbjct: 11 LILLAGLGNPGPQYAGNRHNVGFMVLDELAGRIGGKFKAHRSGAEVLEGRLAGARVVLVK 70
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG ++ F+K+P +V+HD+LD+DFG L+LK GGGD GHNGL+SI++
Sbjct: 71 PRSFMNLSGGPVVGAARFFKVPP-SGVVVVHDELDVDFGALKLKLGGGDNGHNGLRSITK 129
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G ++Y R+R GIGRPP VL +FS+ ER L ID A + L R
Sbjct: 130 SLGTRDYYRVRFGIGRPPGRQDPADFVLKDFSTVERKELPFEIDRCADATEALISR 185
>gi|290959808|ref|YP_003490990.1| aminoacyl-tRNA hydrolase [Streptomyces scabiei 87.22]
gi|260649334|emb|CBG72449.1| aminoacyl-tRNA hydrolase [Streptomyces scabiei 87.22]
Length = 200
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 112/178 (62%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD-----GL 54
+++AGLGNPG EY NRHN+GFM D + +K+ K A++ EG++
Sbjct: 11 WLIAGLGNPGPEYAANRHNVGFMVADLLAE-RIGGRFKRAGKAQAQVVEGRIGPPGPANR 69
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R IL KP +FMNLSG + + +FYK+P + N + IHD+LD+D+G LRLK GGGD GHNG
Sbjct: 70 RVILAKPMSFMNLSGGPVTALRDFYKVP-VANIVAIHDELDIDYGVLRLKLGGGDNGHNG 128
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G +Y R+R GIGRPP + VL +FS+ ER L +D A ++ L
Sbjct: 129 LKSMTKAMGSDYHRVRFGIGRPPGRMQVADFVLKDFSATERKELDYFVDRAADAVECL 186
>gi|254302140|ref|ZP_04969498.1| aminoacyl-tRNA hydrolase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322332|gb|EDK87582.1| aminoacyl-tRNA hydrolase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 191
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 106/165 (64%), Gaps = 2/165 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHNIGF+ ID + ++KF A +SE +DG + I K
Sbjct: 1 MKVVIGLGNPGKKYEKTRHNIGFIAIDNLRKKMNISDEREKFQALVSEKNIDGDKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG S++E++NFYKL ++ +VI+DD+DL FG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNSVIEIVNFYKLDPKKDIIVIYDDMDLSFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
G+ + R++ GIG A + HVLG F+ E+ L I++ I
Sbjct: 121 HIGEEFIRIKCGIGAKEKGA--VEHVLGEFNQTEQKDLDEILEKI 163
>gi|296284046|ref|ZP_06862044.1| peptidyl-tRNA hydrolase [Citromicrobium bathyomarinum JL354]
Length = 189
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 111/185 (60%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I GLGNPG Y +RHNIGFM D I H F +KKF + EG++ + +L+K
Sbjct: 1 MQIWTGLGNPGPRYALHRHNIGFMACDVIAETHDFGPVQKKFQGWVQEGRIGNQKILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E + FYKL E V HD+LDL ++++ GGG AGHNGL+SI++
Sbjct: 61 PATFMNESGRAVAEALRFYKL-EPEALTVFHDELDLAPFKVKVRMGGGLAGHNGLRSINQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++R+RIGIG P + HVLGN++ E L ++ +A LA +D F
Sbjct: 120 HLGPDFRRVRIGIGHPGHKDRVTGHVLGNYAKAEMDDLATMLGAMASEAHWLADGDDARF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNDVA 184
>gi|292670806|ref|ZP_06604232.1| aminoacyl-tRNA hydrolase [Selenomonas noxia ATCC 43541]
gi|292647427|gb|EFF65399.1| aminoacyl-tRNA hydrolase [Selenomonas noxia ATCC 43541]
Length = 211
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 118/181 (65%), Gaps = 9/181 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG EY + +HN+GFM +D + + +W++ FH+ + E ++ G + L+K
Sbjct: 1 MKIIAGLGNPGAEYAKTKHNVGFMLMDALAAHLNAASWREAFHSLVLEVRIGGEKVFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG++L ++++YKL + E+ +V HDD+D+ GT+R++ GG GHNG+KSI
Sbjct: 61 PLTYMNNSGEALGPMLSYYKL-DTEDLVVAHDDMDIPAGTVRIRKKGGSGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERY-------FLLPIIDNIARSLPLL 172
G +N+ R+RIGIGRPP +I HVL FS+ + +LLP ++ IA+ L
Sbjct: 120 HVGSENFARVRIGIGRPPAGWSVINHVLAPFSAEDVPRIREAIDYLLPAMECIAQDGTDL 179
Query: 173 A 173
A
Sbjct: 180 A 180
>gi|320529007|ref|ZP_08030099.1| peptidyl-tRNA hydrolase [Selenomonas artemidis F0399]
gi|320138637|gb|EFW30527.1| peptidyl-tRNA hydrolase [Selenomonas artemidis F0399]
Length = 195
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 112/173 (64%), Gaps = 9/173 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG EY + +HN+GFM +D + AWKK F + ++E ++ + L+K
Sbjct: 1 MKIIAGLGNPGAEYTQTKHNVGFMLVDALAQRLGVSAWKKAFSSLVAEVRIGSEKVFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG +L ++++YK+ + ++ +V+HDD+D+ G +R++T GG GHNG+KSI
Sbjct: 61 PQTYMNDSGSALGPMLSYYKI-DTKDLIVVHDDMDIPAGAVRIRTKGGSGGHNGIKSIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERY-------FLLPIIDNI 165
G + + R+RIGIGRPP +I HVL FS+ + +LLP ++ I
Sbjct: 120 HVGTEEFPRVRIGIGRPPVGWTVINHVLAPFSTDDASLVGEAIGYLLPAVEYI 172
>gi|297717856|gb|ADI50071.1| peptidyl-tRNA hydrolase [Candidatus Odyssella thessalonicensis L13]
Length = 189
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 117/183 (63%), Gaps = 1/183 (0%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y NRHNIGFM ID I FP +K KF +SEG++ G + IL+KP
Sbjct: 6 YLLVGLGNPGAQYSLNRHNIGFMAIDIIADMQQFPNFKSKFSGLLSEGRIAGSKVILLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S+ E FYK+P L N V HDDLDL G L++K GGG GHNGLKSI +
Sbjct: 66 QTYMNLSGRSVAETAKFYKIP-LANIYVFHDDLDLQPGRLKIKRGGGAGGHNGLKSIDQC 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G++Y R+R+GIG P + +VLGNF + +L ++ I +++ L +L
Sbjct: 125 MGQDYWRIRMGIGHPGFKDAVSGYVLGNFHKDDEEWLSNVLARIGKTIEDLLAMSPSDWL 184
Query: 182 NHI 184
N I
Sbjct: 185 NKI 187
>gi|254419393|ref|ZP_05033117.1| peptidyl-tRNA hydrolase [Brevundimonas sp. BAL3]
gi|196185570|gb|EDX80546.1| peptidyl-tRNA hydrolase [Brevundimonas sp. BAL3]
Length = 206
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 115/189 (60%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG----LRT 56
M I+AGLGNPG +Y +NRHNIGFM D I F + KF + +SEG +D ++
Sbjct: 1 MIIIAGLGNPGAKYEKNRHNIGFMAADEIARRWRFGPERAKFQSIVSEGLVDTADGPVKV 60
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L+KPQT+MN SG+++ E FYK+ E +V HD++DL G R+KTGGG AG NG++
Sbjct: 61 LLMKPQTYMNESGRAVGEAARFYKIKPSE-IIVFHDEIDLAPGRFRMKTGGGAAGQNGVR 119
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
S+ G ++R R+GIG P + ++ HVLG+F E+ +L ++ A +LP +
Sbjct: 120 SLISHLGPEFRRARMGIGHPGEKEMVMPHVLGDFHKAEQPWLDALLQACADALPFAVAGD 179
Query: 177 DVSFLNHIV 185
D + ++
Sbjct: 180 DERYQGEVM 188
>gi|256028189|ref|ZP_05442023.1| peptidyl-tRNA hydrolase [Fusobacterium sp. D11]
gi|289766121|ref|ZP_06525499.1| peptidyl-tRNA hydrolase [Fusobacterium sp. D11]
gi|289717676|gb|EFD81688.1| peptidyl-tRNA hydrolase [Fusobacterium sp. D11]
Length = 191
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 106/165 (64%), Gaps = 2/165 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHN+GF+ +D + ++KF A +SE +DG + I K
Sbjct: 1 MKVVIGLGNPGKKYERTRHNMGFIAVDSLRKKFNLNDEREKFQALVSEKNIDGEKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG +++E++NFYKL ++ +VI+DD+DL FG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNAVIEIINFYKLDPKKDIIVIYDDMDLPFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
G+ + R++ GIG A I HVLG F+ E+ L I++NI
Sbjct: 121 HIGEEFVRIKCGIGEKEKDA--IEHVLGEFNQTEQKNLDEILENI 163
>gi|237743729|ref|ZP_04574210.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 7_1]
gi|260495793|ref|ZP_05815914.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 3_1_33]
gi|229432760|gb|EEO42972.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 7_1]
gi|260196640|gb|EEW94166.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 3_1_33]
Length = 191
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 106/165 (64%), Gaps = 2/165 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHN+GF+ +D + ++KF A +SE +DG + I K
Sbjct: 1 MKVVIGLGNPGKKYERTRHNMGFIAVDSLRKKFNLNDEREKFQALVSEKNIDGEKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG +++E++NFYKL ++ +VI+DD+DL FG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNAVIEIINFYKLDPKKDIIVIYDDMDLPFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
G+ + R++ GIG A I HVLG F+ E+ L I++NI
Sbjct: 121 HIGEEFVRIKCGIGEKEKDA--IEHVLGEFNQTEQKNLDEILENI 163
>gi|85708584|ref|ZP_01039650.1| peptidyl-tRNA hydrolase [Erythrobacter sp. NAP1]
gi|85690118|gb|EAQ30121.1| peptidyl-tRNA hydrolase [Erythrobacter sp. NAP1]
Length = 189
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I GLGNPG +Y +RHN+GFM +D I + F +KKF + EG++ + +L+K
Sbjct: 1 MQIWTGLGNPGPKYALHRHNVGFMVLDVIADMYDFGPIQKKFSGWVQEGRIGTQKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E + FYKL +L+ V HD+LDL +++K GGG AGHNGL+SI +
Sbjct: 61 PATFMNESGRSVGEAIRFYKL-DLDALTVFHDELDLAPFKVKVKQGGGTAGHNGLRSIDK 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++R+RIGIG P + +VLGN++ E+ L ++ I LAK +D F
Sbjct: 120 HLGPDFRRVRIGIGHPGHKDRVSGYVLGNYAKSEQDDLAAMLGAIGAEAEWLAKGDDPRF 179
Query: 181 LNHIV 185
++ +
Sbjct: 180 MSDVA 184
>gi|302560228|ref|ZP_07312570.1| peptidyl-tRNA hydrolase [Streptomyces griseoflavus Tu4000]
gi|302477846|gb|EFL40939.1| peptidyl-tRNA hydrolase [Streptomyces griseoflavus Tu4000]
Length = 202
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 113/178 (63%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD-----GL 54
+++ GLGNPG EY NRHN+GFM D + +K+ K A++ EG++ G
Sbjct: 13 WLIVGLGNPGPEYAMNRHNVGFMVADLLAE-RIGARFKRAGKAQAQVLEGRIGPPGPAGR 71
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L KP ++MNLSG + + FYK+P +E + +HD+LD+D+GTLRLK GGGD GHNG
Sbjct: 72 RVVLAKPMSYMNLSGGPVNALREFYKVP-VERVVAVHDELDIDYGTLRLKLGGGDNGHNG 130
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G++Y R+R GIGRPP + VL +F+S ER L +D A ++ L
Sbjct: 131 LKSMTKAFGRDYHRVRFGIGRPPGRMQVADFVLKDFASAERKELDYFVDRAADAVECL 188
>gi|239941865|ref|ZP_04693802.1| peptidyl-tRNA hydrolase [Streptomyces roseosporus NRRL 15998]
gi|291445313|ref|ZP_06584703.1| peptidyl-tRNA hydrolase [Streptomyces roseosporus NRRL 15998]
gi|291348260|gb|EFE75164.1| peptidyl-tRNA hydrolase [Streptomyces roseosporus NRRL 15998]
Length = 197
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 115/178 (64%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD-----GL 54
+++ GLGNPG +Y NRHN+GFM D + + +K+ K A++ EG++
Sbjct: 8 WLIVGLGNPGPDYAANRHNVGFMVADLLAT-RIGGKFKRAQKAQAQVVEGRIGPPGPASR 66
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L+KP ++MNLSG + + +FYK+P ++ +V+HD+LD+D+G LRLK GGGD GHNG
Sbjct: 67 RVVLVKPMSYMNLSGGPVTALRDFYKVPT-DHVVVVHDELDVDYGALRLKLGGGDNGHNG 125
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G +Y R+R GIGRPP + VL +FSS ER L ++D A ++ L
Sbjct: 126 LKSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECL 183
>gi|73666724|ref|YP_302740.1| peptidyl-tRNA hydrolase [Ehrlichia canis str. Jake]
gi|119390939|sp|Q3YT13|PTH_EHRCJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|72393865|gb|AAZ68142.1| peptidyl-tRNA hydrolase [Ehrlichia canis str. Jake]
Length = 193
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 118/187 (63%), Gaps = 3/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++AGLGNPG +Y RHN GFM ID I FP +KKK +A IS G ++ R IL+KP
Sbjct: 4 LLAGLGNPGTQYTLTRHNAGFMVIDAILDKFHFPNFKKKNNALISIGNIESYRVILVKPW 63
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMN SG ++ +++ YK+P L+N +V HD++++DF T+R+K GG+AGHNGLKSI
Sbjct: 64 TFMNNSGVPIMNIVSLYKIP-LDNMIVFHDEVEIDFCTIRVKKSGGNAGHNGLKSIDNFL 122
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
GK+Y R+R GIG P + + +VL +F + + I +I + LL ++ +F +
Sbjct: 123 GKDYWRVRFGIGHPRNKMDLSDYVLSHFHNLNA--VNNTISSIVEHITLLLEKNHTTFTD 180
Query: 183 HIVSVRK 189
+ + K
Sbjct: 181 KVRNTLK 187
>gi|237736260|ref|ZP_04566741.1| peptidyl-tRNA hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229421608|gb|EEO36655.1| peptidyl-tRNA hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 186
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 106/167 (63%), Gaps = 2/167 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG++Y + RHNIGF I+ + K+KF ISE +DG + + +K
Sbjct: 1 MKLIVGLGNPGNKYEKTRHNIGFEVINHLQKELSITNEKEKFQGLISEKNIDGEKVLFLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG S++EV+NFYKL + +VI+DD+DL G LR+K G GHNG+KSI
Sbjct: 61 PQTFMNLSGNSIIEVINFYKLNPKTDLVVIYDDMDLPVGKLRVKEKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G + R++ GIG+P D I VLG FS E+ + +I+N ++
Sbjct: 121 HLGDEFLRIKCGIGKPKDNT--IDFVLGQFSKSEQEEVTMMIENASK 165
>gi|296271107|ref|YP_003653739.1| peptidyl-tRNA hydrolase [Thermobispora bispora DSM 43833]
gi|296093894|gb|ADG89846.1| peptidyl-tRNA hydrolase [Thermobispora bispora DSM 43833]
Length = 209
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 108/166 (65%), Gaps = 2/166 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY NRHN GFM D + + K A+++EG+L G+ +L KP
Sbjct: 15 WLIVGLGNPGPEYAMNRHNAGFMVADELANRIGGRFTVHKTRAQVAEGRLSGVPVVLAKP 74
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
++MNLSG + + ++YK+ EN +VIHD+LD+ FG LR KTGGGD GHNGLKSI++
Sbjct: 75 LSYMNLSGGPVKALADYYKI-GPENIVVIHDELDIPFGALRAKTGGGDNGHNGLKSITKA 133
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
G ++Y R+R GIGRPP +VL +F++ ER L +ID A
Sbjct: 134 LGTRDYSRIRFGIGRPPGRMDPATYVLRDFATAERKDLPFLIDRAA 179
>gi|302534902|ref|ZP_07287244.1| peptidyl-tRNA hydrolase [Streptomyces sp. C]
gi|302443797|gb|EFL15613.1| peptidyl-tRNA hydrolase [Streptomyces sp. C]
Length = 197
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 109/178 (61%), Gaps = 6/178 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD-----GLRT 56
+++ GLGNPG EY NRHNIGFM D + K A++ EG++ R
Sbjct: 9 WLIVGLGNPGAEYAGNRHNIGFMVADLLAERIGGKFKAHKARAQVVEGRMGPPGPLNRRV 68
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
++ KP +FMNLSG + + +FYK+P LE + +HD+LD+D+ TLRLK GGGD GHNGLK
Sbjct: 69 VIAKPLSFMNLSGGPVTALRDFYKVP-LERIVAVHDELDIDYATLRLKLGGGDNGHNGLK 127
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
S+++ G +Y R+R GIGRPP + VL +FSS ER L +D A ++ L +
Sbjct: 128 SMTKSMGADYHRVRCGIGRPPGRMQVADFVLRDFSSTERKELDWFVDRSADAVECLVQ 185
>gi|301168559|emb|CBW28149.1| Peptidyl-tRNA hydrolase [Bacteriovorax marinus SJ]
Length = 190
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 112/168 (66%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG EY RHNI + D + SF W+ K+ E++ +++G + I +KPQ
Sbjct: 5 LIVGLGNPGAEYRNTRHNIAWETFDNL-SFAQNLRWQSKYKGEMATTEIEGEKVIFLKPQ 63
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S+ + NF+K+P +E+ LV+HD+LDL+FGT+ K GGG AGHNGLKSI++
Sbjct: 64 TFMNLSGESVAPLANFFKIP-VEDILVVHDELDLNFGTIAYKDGGGLAGHNGLKSIAQCL 122
Query: 123 GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
GK N+KRLR+GIGRP + + VL + + FL + A+++
Sbjct: 123 GKQNFKRLRVGIGRPVHGS-VSNWVLSGYHGEDAEFLESYLKGAAKAV 169
>gi|303239798|ref|ZP_07326322.1| peptidyl-tRNA hydrolase [Acetivibrio cellulolyticus CD2]
gi|302592735|gb|EFL62459.1| peptidyl-tRNA hydrolase [Acetivibrio cellulolyticus CD2]
Length = 190
Score = 147 bits (372), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 109/175 (62%), Gaps = 2/175 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+F+V GLGNPG +Y RHN+GF IDR+ H K K A I +G ++G R IL+K
Sbjct: 4 LFVVIGLGNPGTKYDNTRHNVGFDTIDRLSKKHNIAVTKVKHKAVIGDGTIEGARVILVK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
PQTFMNLSG+S+ E+M +YK+P +EN ++++DD+DL G LR++ G HNG++S I
Sbjct: 64 PQTFMNLSGESVREIMEWYKIP-VENIIIVYDDIDLPVGKLRVRPKGSAGTHNGMRSVIY 122
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ ++ R+RIG+ +PP + VL FS ER + I+N ++ + K
Sbjct: 123 QIQSDDFPRIRIGVDKPPQGWDLANFVLSKFSPDERKNVEEAIENAVGAVETIIK 177
>gi|258541470|ref|YP_003186903.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-01]
gi|256632548|dbj|BAH98523.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-01]
gi|256635605|dbj|BAI01574.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-03]
gi|256638660|dbj|BAI04622.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-07]
gi|256641714|dbj|BAI07669.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-22]
gi|256644769|dbj|BAI10717.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-26]
gi|256647824|dbj|BAI13765.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-32]
gi|256650877|dbj|BAI16811.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653868|dbj|BAI19795.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-12]
Length = 193
Score = 147 bits (372), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP +RHN+GFM ++ I + F W+ +F E++EG++ G + +L+
Sbjct: 1 MLLWVGLGNPESSMRRHRHNVGFMAVEAIARKYGFTPWRNRFKGEVAEGRIGGQKVLLLL 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ E FYK+ EN V HD+LDL G LR+K GGG AGHNGL+S +
Sbjct: 61 PMTYMNKSGESVQEAAAFYKIAP-ENITVFHDELDLAPGRLRIKRGGGAAGHNGLRSTDK 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERY-FLLPIIDNIARSLPLLAKREDV 178
G Y R+RIGIG P + VLGNF+ +R +L ++D +A + PLLA
Sbjct: 120 MLGTPEYWRVRIGIGHPGAKERVHGWVLGNFTETDRQEWLERLLDRMADAAPLLADGRAD 179
Query: 179 SFLNHIV 185
F+ +
Sbjct: 180 QFMTKVA 186
>gi|320010339|gb|ADW05189.1| peptidyl-tRNA hydrolase [Streptomyces flavogriseus ATCC 33331]
Length = 197
Score = 147 bits (372), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 113/178 (63%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD-----GL 54
+++ GLGNPG EY NRHN+GFM D + + +K+ K A++ EG++
Sbjct: 8 WLIVGLGNPGPEYAANRHNVGFMVADLL-AERMGGKFKRAQKAQAQVLEGRIGPPGPASR 66
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L KP ++MNLSG + + +FYK+P ++ + +HD+LD+DFG LRLK GGGD GHNG
Sbjct: 67 RVVLAKPMSYMNLSGGPVTALRDFYKVPT-DHVVAVHDELDIDFGMLRLKLGGGDNGHNG 125
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G +Y R+R GIGRPP + VL +FSS ER L ++D A ++ L
Sbjct: 126 LKSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELAYLVDRSADAVESL 183
>gi|313895642|ref|ZP_07829198.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975768|gb|EFR41227.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 195
Score = 147 bits (371), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 112/173 (64%), Gaps = 9/173 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG EY + +HN+GF+ +D + AWKK F + ++E ++ + L+K
Sbjct: 1 MKIIAGLGNPGAEYTQTKHNVGFILVDALAQRLGVSAWKKAFSSLVAEVRIGSEKVFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG +L ++++YK+ + ++ +V+HDD+D+ G +R++T GG GHNG+KSI
Sbjct: 61 PQTYMNDSGSALGPMLSYYKI-DTKDLIVVHDDMDIPAGAVRIRTKGGSGGHNGIKSIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERY-------FLLPIIDNI 165
G + + R+RIGIGRPP +I HVL FS+ + +LLP ++ I
Sbjct: 120 HVGTEEFPRVRIGIGRPPVGWTVINHVLAPFSTDDASLVGEAIGYLLPAVEYI 172
>gi|239988327|ref|ZP_04708991.1| peptidyl-tRNA hydrolase [Streptomyces roseosporus NRRL 11379]
Length = 197
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 114/178 (64%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD-----GL 54
+++ GLGNPG +Y NRHN+GFM D + + +K+ K A++ EG++
Sbjct: 8 WLIVGLGNPGPDYAANRHNVGFMVADLLAT-RIGGKFKRAQKAQAQVVEGRIGPPGPASR 66
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L+KP ++MNLSG + + +FYK+P ++ + +HD+LD+D+G LRLK GGGD GHNG
Sbjct: 67 RVVLVKPMSYMNLSGGPVTALRDFYKVPT-DHVVAVHDELDVDYGALRLKLGGGDNGHNG 125
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G +Y R+R GIGRPP + VL +FSS ER L ++D A ++ L
Sbjct: 126 LKSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECL 183
>gi|307324317|ref|ZP_07603525.1| peptidyl-tRNA hydrolase [Streptomyces violaceusniger Tu 4113]
gi|306890048|gb|EFN21026.1| peptidyl-tRNA hydrolase [Streptomyces violaceusniger Tu 4113]
Length = 196
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 108/176 (61%), Gaps = 6/176 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL-----DGLRT 56
++V GLGNPG EY NRHN+GFM D + K A++ EG++ R
Sbjct: 8 WLVVGLGNPGGEYVGNRHNVGFMVADLLAGRMGARFKAHKSRAQVVEGRVGPPGPSSRRV 67
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
++ KP +FMNLSG + + +FYK+P + + + +HD+LD+D+G LRLK GGGD GHNGLK
Sbjct: 68 VVAKPMSFMNLSGGPVTALRDFYKVP-VGHVVAVHDELDIDYGALRLKVGGGDNGHNGLK 126
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
SI++ G +Y R+R GIGRPP + VL +FS+ ER L +D A ++ L
Sbjct: 127 SITKSLGADYCRVRFGIGRPPGRMDVAAFVLKDFSAAERKELDYFVDRAADAVETL 182
>gi|182438174|ref|YP_001825893.1| peptidyl-tRNA hydrolase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178466690|dbj|BAG21210.1| putative peptidyl-tRNA hydrolase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 204
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 114/178 (64%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD-----GL 54
+++ GLGNPG +Y NRHN+GFM D + + +K+ K A++ EG++
Sbjct: 15 WLIVGLGNPGPDYAANRHNVGFMVADLLAT-RIGGKFKRAQKAQAQVVEGRMGPPGPGSR 73
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L+KP ++MNLSG + + +FYK+P ++ + +HD+LD+D+G LRLK GGGD GHNG
Sbjct: 74 RVVLVKPMSYMNLSGGPVTALRDFYKVPT-DHVVAVHDELDVDYGMLRLKLGGGDNGHNG 132
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G +Y R+R GIGRPP + VL +FSS ER L ++D A ++ L
Sbjct: 133 LKSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECL 190
>gi|326778824|ref|ZP_08238089.1| peptidyl-tRNA hydrolase [Streptomyces cf. griseus XylebKG-1]
gi|326659157|gb|EGE44003.1| peptidyl-tRNA hydrolase [Streptomyces cf. griseus XylebKG-1]
Length = 197
Score = 147 bits (370), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 114/178 (64%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD-----GL 54
+++ GLGNPG +Y NRHN+GFM D + + +K+ K A++ EG++
Sbjct: 8 WLIVGLGNPGPDYAANRHNVGFMVADLLAT-RIGGKFKRAQKAQAQVVEGRMGPPGPGSR 66
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L+KP ++MNLSG + + +FYK+P ++ + +HD+LD+D+G LRLK GGGD GHNG
Sbjct: 67 RVVLVKPMSYMNLSGGPVTALRDFYKVPT-DHVVAVHDELDVDYGMLRLKLGGGDNGHNG 125
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G +Y R+R GIGRPP + VL +FSS ER L ++D A ++ L
Sbjct: 126 LKSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECL 183
>gi|300790049|ref|YP_003770340.1| peptidyl-tRNA hydrolase, PTH1 family [Amycolatopsis mediterranei
U32]
gi|299799563|gb|ADJ49938.1| peptidyl-tRNA hydrolase, PTH1 family [Amycolatopsis mediterranei
U32]
Length = 197
Score = 147 bits (370), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ ++AGLGNPG +Y NRHN+GFM +D + + K E+ EG+L G R +L+K
Sbjct: 11 LILLAGLGNPGPQYAGNRHNVGFMVLDELAARIGGKFKTHKSGGEVLEGRLAGRRVVLVK 70
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+++MNLSG + FYK+ +V+HD+LD+DFGTL+LK GGGD GHNGL+SIS+
Sbjct: 71 PRSYMNLSGGPVAGAAKFYKI-EPSGVVVVHDELDVDFGTLKLKFGGGDNGHNGLRSISK 129
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G ++Y R+R GIGRPP VL +FS+ ER L +D A + L
Sbjct: 130 SLGTRDYYRVRFGIGRPPGRQDPADFVLKDFSTVERKELPLEVDRCADATEAL 182
>gi|254520522|ref|ZP_05132578.1| peptidyl-tRNA hydrolase [Clostridium sp. 7_2_43FAA]
gi|226914271|gb|EEH99472.1| peptidyl-tRNA hydrolase [Clostridium sp. 7_2_43FAA]
Length = 191
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 114/175 (65%), Gaps = 4/175 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG EY RHNIGF ID I + + + KF EG ++ + IL+K
Sbjct: 1 MFLIVGLGNPGKEYDGTRHNIGFEAIDYISNKYNIDINRTKFKGVYGEGFINNNKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ EV+NFYKL N E +VI+DD+ L+ G LR++ G GHNG+KSI
Sbjct: 61 PTTYMNLSGESIREVINFYKLENDE-VIVIYDDISLEVGKLRIREKGSAGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G + + R++IG+G+P T+ ++ HVLG F+ + L+ +ID ++++ ++ K
Sbjct: 120 NIGTDIFPRVKIGVGQP--TSDLVSHVLGRFNKEDMDSLIEVIDASSKAVEVIIK 172
>gi|167039250|ref|YP_001662235.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X514]
gi|300913890|ref|ZP_07131207.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X561]
gi|307725425|ref|YP_003905176.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X513]
gi|238687630|sp|B0K466|PTH_THEPX RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166853490|gb|ABY91899.1| Aminoacyl-tRNA hydrolase [Thermoanaerobacter sp. X514]
gi|300890575|gb|EFK85720.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X561]
gi|307582486|gb|ADN55885.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X513]
Length = 184
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 101/159 (63%), Gaps = 4/159 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG EY RHN+GFM ID + K KF + + EG G + IL+K
Sbjct: 1 MYVIAGLGNPGREYEGTRHNVGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG++L + +NFYK+P LEN +VI+DD DLD G +R++ G GHNG+ SI
Sbjct: 61 PQTFMNSSGEALYDAVNFYKIP-LENVIVIYDDKDLDLGKIRIRKKGSSGGHNGMNSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+ + R+RIGIG+P ++ HVLG F E+ +
Sbjct: 120 LLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLI 156
>gi|103487103|ref|YP_616664.1| peptidyl-tRNA hydrolase [Sphingopyxis alaskensis RB2256]
gi|119391011|sp|Q1GSP1|PTH_SPHAL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|98977180|gb|ABF53331.1| peptidyl-tRNA hydrolase [Sphingopyxis alaskensis RB2256]
Length = 189
Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 111/185 (60%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +RHN+GFM D I H FP KKF + +G++ R +L+K
Sbjct: 1 MQLWVGLGNPGPKYAMHRHNVGFMAADVIAEIHDFPPPVKKFQGWLQDGRIGSTRILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++FYKL + V +D+LDL +++K GGG AGHNG++S+ +
Sbjct: 61 PGTFMNESGRSVRAALDFYKLA-ATDVTVFYDELDLAPMKVKVKRGGGAAGHNGIRSMIQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++R+RIGIG P + HVLGN+ E L ++ IA LAK +DV F
Sbjct: 120 HIGDDFRRIRIGIGHPGHKDRVTGHVLGNYHKSEMEPLADLLGAIAAEAEWLAKGDDVRF 179
Query: 181 LNHIV 185
+ +
Sbjct: 180 QSDLA 184
>gi|34762679|ref|ZP_00143670.1| Peptidyl-tRNA hydrolase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|294784149|ref|ZP_06749450.1| aminoacyl-tRNA hydrolase [Fusobacterium sp. 3_1_27]
gi|27887636|gb|EAA24714.1| Peptidyl-tRNA hydrolase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|294488219|gb|EFG35564.1| aminoacyl-tRNA hydrolase [Fusobacterium sp. 3_1_27]
Length = 191
Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 106/167 (63%), Gaps = 5/167 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHN+GF+ +D + ++KF A +SE +DG + I K
Sbjct: 1 MRVVIGLGNPGKKYERTRHNMGFIVVDSLRKKLNINDEREKFQALVSEKNIDGDKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG +++E++NFYKL ++ +VI+DD+DL FG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNAVIEIINFYKLDPKKDIIVIYDDMDLSFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL---LPIIDN 164
G+ + R++ GIG A + HVLG F+ E+ L L I+DN
Sbjct: 121 HIGEEFIRIKCGIGAKEKDA--VEHVLGEFNQTEQKDLDEILEIVDN 165
>gi|297200253|ref|ZP_06917650.1| peptidyl-tRNA hydrolase [Streptomyces sviceus ATCC 29083]
gi|197716993|gb|EDY61027.1| peptidyl-tRNA hydrolase [Streptomyces sviceus ATCC 29083]
Length = 200
Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 110/178 (61%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD-----GL 54
+++ GLGNPG EY NRHN+GFM D + +K+ K A++ EG++
Sbjct: 11 WLIVGLGNPGPEYAGNRHNVGFMVADLLAE-RVGGRFKRAGKAQAQVVEGRIGPPGPANR 69
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L KP +FMNLSG + + +FYK+P + N + IHD+LD+D+G LRLK GGGD GHNG
Sbjct: 70 RVVLAKPMSFMNLSGGPVNALKDFYKVP-VANIVAIHDELDIDYGVLRLKLGGGDNGHNG 128
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 129 LKSMTKAFGAEYHRVRFGIGRPPGRMQVADFVLKDFSSSERKELDYFVDRAADAVEAL 186
>gi|289579381|ref|YP_003478008.1| peptidyl-tRNA hydrolase [Thermoanaerobacter italicus Ab9]
gi|289529094|gb|ADD03446.1| peptidyl-tRNA hydrolase [Thermoanaerobacter italicus Ab9]
Length = 189
Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 4/159 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNPG EY + RHNIGFM ID + K KF + + E G + IL+K
Sbjct: 1 MFIIAGLGNPGIEYEQTRHNIGFMVIDELAKKLGINVTKLKFKSLMGEDYFKGEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG++L E +NFYK+P LEN +VI+DD DLD G +R++ G GHNG+ SI
Sbjct: 61 PQTFMNSSGEALYEAVNFYKIP-LENVIVIYDDKDLDVGKIRIRKKGSSGGHNGMNSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+ + R+RIGIG+P ++ HVLG F E+ +
Sbjct: 120 LLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLI 156
>gi|256846562|ref|ZP_05552019.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 3_1_36A2]
gi|256718331|gb|EEU31887.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 3_1_36A2]
Length = 191
Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 106/167 (63%), Gaps = 5/167 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHN+GF+ +D + ++KF A +SE +DG + I K
Sbjct: 1 MKVVIGLGNPGKKYERTRHNMGFIVVDSLRKKLNINDEREKFQALVSEKNIDGEKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG +++E++NFYKL ++ +VI+DD+DL FG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNAVIEIINFYKLDPKKDIIVIYDDMDLSFGDIRIRERGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL---LPIIDN 164
G+ + R++ GIG A + HVLG F+ E+ L L I+DN
Sbjct: 121 HIGEEFIRIKCGIGTKEKDA--VEHVLGEFNQTEQKDLDEILEIVDN 165
>gi|254512451|ref|ZP_05124518.1| peptidyl-tRNA hydrolase [Rhodobacteraceae bacterium KLH11]
gi|221536162|gb|EEE39150.1| peptidyl-tRNA hydrolase [Rhodobacteraceae bacterium KLH11]
Length = 228
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +DRI H F WK KF AEI+EG+L + +L+K
Sbjct: 1 MKLFVGLGNPGAKYARNRHNIGFMAMDRIAGDHGFGPWKSKFQAEIAEGRLGSQKILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SGQS+ E M FYKL + + V HD+LDL G +R+K GGG AGHNGL+SI +
Sbjct: 61 PQTFMNRSGQSVGEAMRFYKL-DSTDVTVFHDELDLAPGKVRVKAGGGHAGHNGLRSIHD 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y R+R+GIG P + +VL +F+ + +L ++ ++ LA F
Sbjct: 120 HISPAYDRVRLGIGHPGRKEMVSPYVLSDFAKADATWLDDVLQGVSDGAGYLANDAGGKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|239948214|ref|ZP_04699967.1| peptidyl-tRNA hydrolase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239922490|gb|EER22514.1| peptidyl-tRNA hydrolase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 176
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 114/175 (65%), Gaps = 2/175 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHNIGF+ I++I ++ + KKKF+ EI+E DG + I I
Sbjct: 1 MILVIGLGNPGKEYQYTRHNIGFIAIEKIAEQYNLSFSTKKKFNCEIAETISDGQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + + + VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNIHSAK-IFVIHDDIDLETGRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G NY R+RIG+GRP + +VL NFS PE L ID IA + L+ +
Sbjct: 120 GVIGNNYNRIRIGVGRPQSNQDVADYVLNNFSKPEYETALQAIDIIANNFDLILR 174
>gi|297193931|ref|ZP_06911329.1| peptidyl-tRNA hydrolase [Streptomyces pristinaespiralis ATCC 25486]
gi|197720294|gb|EDY64202.1| peptidyl-tRNA hydrolase [Streptomyces pristinaespiralis ATCC 25486]
Length = 197
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 110/178 (61%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDG-----L 54
+++ GLGNPG Y NRHN+GFM D + ++K+ K A+ EG++
Sbjct: 8 WLIVGLGNPGPGYAANRHNVGFMVADLLAE-RIGGSFKRAGKAQAQALEGRIGAPGPSNR 66
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R IL KP ++MNLSG + + +FYK+P N + +HD+LD+D+GTLRLK GGGD GHNG
Sbjct: 67 RVILAKPMSYMNLSGGPVTALRDFYKVPT-SNIVAVHDELDIDYGTLRLKLGGGDNGHNG 125
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G +Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 126 LKSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELDYFVDRAADAVECL 183
>gi|289642499|ref|ZP_06474643.1| peptidyl-tRNA hydrolase [Frankia symbiont of Datisca glomerata]
gi|289507673|gb|EFD28628.1| peptidyl-tRNA hydrolase [Frankia symbiont of Datisca glomerata]
Length = 203
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 115/175 (65%), Gaps = 2/175 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG Y NRHNIGFM +D + + A+++E +L G+R +L KP
Sbjct: 14 WLVVGLGNPGPTYAGNRHNIGFMVLDLLAERVRDRFRTHRGRADVAEARLAGVRALLAKP 73
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
++FMN+SG + + F+K+ ++ + +V+HD+LD+ FGT+RLK GGGD GHNGL+S++
Sbjct: 74 RSFMNVSGSPVEALRAFFKV-DIGHIVVVHDELDIPFGTIRLKLGGGDNGHNGLRSVTAA 132
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G ++Y R+R+GIGRPP + VL +FS+PER L ++D A ++ L R
Sbjct: 133 LGSRDYLRVRVGIGRPPGRMNPADFVLRDFSAPERKELPFLVDRAADAVESLLDR 187
>gi|206900849|ref|YP_002251219.1| peptidyl-tRNA hydrolase [Dictyoglomus thermophilum H-6-12]
gi|206739952|gb|ACI19010.1| peptidyl-tRNA hydrolase [Dictyoglomus thermophilum H-6-12]
Length = 193
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 105/172 (61%), Gaps = 6/172 (3%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
+ GLGNPG+EY RHN+GFM +D + F FP +KK I+ G++ L+KPQT
Sbjct: 6 IVGLGNPGYEYANTRHNVGFMVVDYLQEFFKFPPYKKTSSNLITFGRVHNTEVYLVKPQT 65
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
+MNLSG + E + + E LVIHDDLDL GT+R++ G D GHNG+KSI ++
Sbjct: 66 YMNLSGIGVKEFLAKFNFKP-EEVLVIHDDLDLLVGTIRIRFDGKDGGHNGIKSIIKEIN 124
Query: 124 K-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
N+ RLRIGIG+P D ++ +VLGNF E II+ I +S P + +
Sbjct: 125 TPNFYRLRIGIGKPKDKNQVVEYVLGNFEDEE----FTIINKIIQSSPQIVE 172
>gi|158312638|ref|YP_001505146.1| peptidyl-tRNA hydrolase [Frankia sp. EAN1pec]
gi|158108043|gb|ABW10240.1| Aminoacyl-tRNA hydrolase [Frankia sp. EAN1pec]
Length = 195
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 110/183 (60%), Gaps = 2/183 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG Y NRHN+GFM +D + + AEI + +L G +L +P
Sbjct: 10 WLVVGLGNPGASYAGNRHNVGFMVVDLLAERTGARLRSHRSRAEIDQVRLAGRSVVLARP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+TFMN+SG + V FYK+ ++ +V+HD+LD+ F +RLK GGGD GHNGL+SI+
Sbjct: 70 RTFMNVSGPPVAAVRAFYKI-DVSRVIVVHDELDIPFDAIRLKRGGGDNGHNGLRSITSS 128
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y R+R+GIGRPP VL +FS ER L I+DN A ++ L + E +
Sbjct: 129 LGSRDYLRVRVGIGRPPGRMDPADFVLRDFSPVERKALPLIVDNAADAVESLLQEELAAA 188
Query: 181 LNH 183
N
Sbjct: 189 QNR 191
>gi|306820707|ref|ZP_07454335.1| aminoacyl-tRNA hydrolase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551317|gb|EFM39280.1| aminoacyl-tRNA hydrolase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 187
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 111/180 (61%), Gaps = 3/180 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNPG +Y +HN+GFMC+D + + KF+A I EG G + IL+K
Sbjct: 1 MYIIVGLGNPGTKYQNTKHNVGFMCLDLLSEKLNIKIDRIKFNALIGEGNYKGEKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ ++MNFYK+ +N V++DD+D+D G LR++ G HNG+K+I
Sbjct: 61 PQTFMNLSGQAVNQIMNFYKVER-QNLFVLYDDIDIDIGKLRIRKKGSSGTHNGMKNIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ R RIG+ +PP + +VL F+ E L+P++++ + L A DV
Sbjct: 120 LLGYDDFPRFRIGVSKPPAYMDLASYVLSKFTDEEVKKLIPVLNDTVDAC-LYAIETDVD 178
>gi|91205676|ref|YP_538031.1| peptidyl-tRNA hydrolase [Rickettsia bellii RML369-C]
gi|119390997|sp|Q1RI72|PTH_RICBR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|91069220|gb|ABE04942.1| Peptidyl-tRNA hydrolase [Rickettsia bellii RML369-C]
Length = 185
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 117/186 (62%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG EY RHNIGF+ ++ I + + KKKFH EI+E +G + I +
Sbjct: 1 MMLIIGLGNPGKEYEHTRHNIGFIALENIAKQYETSFSVKKKFHCEIAESTNNGQKLIFV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y +P LE VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVIAVKTYYNIP-LEKIFVIHDDIDLELGKIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+RIG+GRP ++ + +VL NFS E ID I + L+ + +
Sbjct: 120 GIIGNNYHRIRIGVGRPQNSQDVADYVLNNFSKTEYVIAEQAIDKITDNFNLILENKLEE 179
Query: 180 FLNHIV 185
F + +V
Sbjct: 180 FKSKMV 185
>gi|78043715|ref|YP_359068.1| peptidyl-tRNA hydrolase [Carboxydothermus hydrogenoformans Z-2901]
gi|85681884|sp|Q9F8Q3|PTH_CARHZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|77995830|gb|ABB14729.1| peptidyl-tRNA hydrolase [Carboxydothermus hydrogenoformans Z-2901]
Length = 187
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNPG EY RHN GFM +D + H K+KF + + EG++ G++ +L+K
Sbjct: 1 MFIIAGLGNPGQEYENTRHNAGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG ++ E ++FYKLP L +V++DDLDL G +RL+ G GH G+ SI
Sbjct: 61 PQTYMNLSGTAVQEAVSFYKLP-LSRLVVVYDDLDLPLGKIRLRLKGSAGGHRGMGSIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G + RL+IGIGRP + +VL F+ ER L P + A ++ +
Sbjct: 120 CLGSEEIPRLKIGIGRPA-VGDVKDYVLQPFTGAEREILEPTLKLAAEAITV 170
>gi|297545522|ref|YP_003677824.1| peptidyl-tRNA hydrolase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843297|gb|ADH61813.1| peptidyl-tRNA hydrolase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 189
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 101/159 (63%), Gaps = 4/159 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNPG EY + RHNIGFM ID + K KF + + E G + IL+K
Sbjct: 1 MFIIAGLGNPGIEYEQTRHNIGFMVIDELAKKLGINVTKLKFKSLMGEDYFKGEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG++L E +NFYK+P LEN ++I+DD DLD G +R++ G GHNG+ SI
Sbjct: 61 PQTFMNSSGEALYEAVNFYKIP-LENVIIIYDDKDLDVGKIRIRKKGSSGGHNGMNSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+ + R+RIGIG+P ++ HVLG F E+ +
Sbjct: 120 LLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLI 156
>gi|67458745|ref|YP_246369.1| peptidyl-tRNA hydrolase [Rickettsia felis URRWXCal2]
gi|75536798|sp|Q4UMK4|PTH_RICFE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|67004278|gb|AAY61204.1| Peptidyl-tRNA hydrolase [Rickettsia felis URRWXCal2]
Length = 185
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 119/186 (63%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHNIGF+ I++I + ++ + KKKF+ EI+E DG + I I
Sbjct: 1 MILVIGLGNPGKEYQYTRHNIGFIAIEKIANQYNSSFSIKKKFNCEIAETISDGQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + + + VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNIQSAK-IFVIHDDIDLETGRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+R+G+GRP + + +VL NF E L ID IA + L+ + +
Sbjct: 120 GVIGNNYNRIRVGVGRPQNNQDVADYVLNNFLKSEYETALQAIDRIANNFDLILENKLEE 179
Query: 180 FLNHIV 185
F N IV
Sbjct: 180 FKNKIV 185
>gi|218509727|ref|ZP_03507605.1| peptidyl-tRNA hydrolase [Rhizobium etli Brasil 5]
Length = 131
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH H F W KKF AEI+EG+L G + +LIK
Sbjct: 1 MLIIAGLGNPGGKYAGNRHNIGFMAVDAIHRRHSFSPWSKKFKAEIAEGELGGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E M FYKL + + I+D+LDL G RLKTGGG GHNG++S+
Sbjct: 61 PQTYMNLSGEAVGEAMRFYKL-QPADLVAIYDELDLSPGKARLKTGGGHGGHNGIRSLDA 119
Query: 121 KCGKNYKRLRIG 132
CGK Y+RLR+G
Sbjct: 120 HCGKEYRRLRLG 131
>gi|294629796|ref|ZP_06708356.1| peptidyl-tRNA hydrolase [Streptomyces sp. e14]
gi|292833129|gb|EFF91478.1| peptidyl-tRNA hydrolase [Streptomyces sp. e14]
Length = 203
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 112/178 (62%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD-----GL 54
+++ GLGNPG EY NRHN+GFM D + +K+ K A++ EG++
Sbjct: 14 WLIVGLGNPGPEYAMNRHNVGFMVADLLAD-RMGGRFKRAGKAQAQVVEGRIGPPGPASR 72
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L KP ++MNLSG + + +FYK+P L++ + +HD+LD+D+G LRLK GGGD GHNG
Sbjct: 73 RVVLAKPMSYMNLSGGPVNALRDFYKVP-LDHVVAVHDELDIDYGVLRLKRGGGDNGHNG 131
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G +Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 132 LKSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELDYFVDRAADAVECL 189
>gi|318061240|ref|ZP_07979961.1| peptidyl-tRNA hydrolase [Streptomyces sp. SA3_actG]
gi|318075755|ref|ZP_07983087.1| peptidyl-tRNA hydrolase [Streptomyces sp. SA3_actF]
Length = 202
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 112/181 (61%), Gaps = 9/181 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHA--EISEGQL-----DGL 54
++VAGLGNPG EY NRHN+GFM D + + +K+ A ++ EG+L
Sbjct: 13 WLVAGLGNPGPEYAGNRHNVGFMVADLLAA-RLGGRFKRAARARAQVVEGRLGVPGVSST 71
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R ++ KP ++MNLSG + + +FYK+P LE + +HD+LD+D+G LRLK GGGD GHNG
Sbjct: 72 RVVVAKPLSYMNLSGGPVTALRDFYKVP-LERVVAVHDELDIDYGVLRLKLGGGDNGHNG 130
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
LKS+++ G Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 131 LKSMTKAMGPAYHRVRFGIGRPPGRMQVADFVLKDFSSSERKELDYFVDRAADAVEALVT 190
Query: 175 R 175
+
Sbjct: 191 Q 191
>gi|257459023|ref|ZP_05624142.1| peptidyl-tRNA hydrolase [Campylobacter gracilis RM3268]
gi|257443408|gb|EEV18532.1| peptidyl-tRNA hydrolase [Campylobacter gracilis RM3268]
Length = 185
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 106/174 (60%), Gaps = 10/174 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEI-SEGQLDGLRTIL 58
M ++AGLGNP +Y + RHN+GFM ID I + F KF E+ +G L +L
Sbjct: 1 MILIAGLGNPAQKYADTRHNVGFMLIDEILKTGGFSELGSSKFQGELFKKGSL-----LL 55
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KPQTFMNLSG S+ V +FYK P E +++HDD+DLD G ++ K GG GHNG+KSI
Sbjct: 56 LKPQTFMNLSGNSVKAVNDFYK-P--ERIIIVHDDIDLDLGAVKFKKGGSSGGHNGIKSI 112
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G +Y+R+RIG+G+ VLGNFS ER L I+ +AR++ L
Sbjct: 113 DALIGADYERVRIGVGKKQQDQDAANFVLGNFSESEREKLGEILPYVARAVKEL 166
>gi|329941175|ref|ZP_08290454.1| aminoacyl-tRNA hydrolase [Streptomyces griseoaurantiacus M045]
gi|329299706|gb|EGG43605.1| aminoacyl-tRNA hydrolase [Streptomyces griseoaurantiacus M045]
Length = 199
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 109/179 (60%), Gaps = 11/179 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF---HFFPAWKKKFHAEISEGQLD-----G 53
++V GLGNPG EY NRHN+GFM D + F A + A++ EG++
Sbjct: 10 WLVVGLGNPGPEYAMNRHNVGFMVADLLAGRTGGRFKRA--ARTQAQVVEGRMGPPGPGS 67
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
R +L+KP ++MNLSG + + FYK+P L + + +HD+LD+D+G LRLK GGGD GHN
Sbjct: 68 RRVVLVKPMSYMNLSGGPVNALREFYKVP-LSHVVAVHDELDIDYGVLRLKRGGGDNGHN 126
Query: 114 GLKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GLKS+++ G Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 127 GLKSMTKAMGAEYHRVRCGIGRPPGRMQVADFVLKDFSSAERKELDWFVDRAADAVECL 185
>gi|89069014|ref|ZP_01156395.1| peptidyl-tRNA hydrolase [Oceanicola granulosus HTCC2516]
gi|89045383|gb|EAR51448.1| peptidyl-tRNA hydrolase [Oceanicola granulosus HTCC2516]
Length = 230
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y RHNIGFM +D+I S H FP+++ KF E+SEG+L G R +L+K
Sbjct: 1 MKLFVGLGNPGPKYARTRHNIGFMAVDQIASDHGFPSFRAKFQGELSEGRLGGERVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E M FYKL + + V HD++DL G +RLK GGG AGHNGL+SI +
Sbjct: 61 PMTFMNLSGQSVGEAMRFYKLEST-DVTVFHDEIDLAPGKVRLKAGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F + +L ++ I LA+ + F
Sbjct: 120 HIGPHYDRVRLGVGHPGRKEAVPGYVLHDFPKADEGWLDDVLRGIGDGAVALAEGDGARF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 SNAVA 184
>gi|86742630|ref|YP_483030.1| peptidyl-tRNA hydrolase [Frankia sp. CcI3]
gi|119390941|sp|Q2J5Z1|PTH_FRASC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86569492|gb|ABD13301.1| peptidyl-tRNA hydrolase [Frankia sp. CcI3]
Length = 197
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 109/172 (63%), Gaps = 2/172 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++VAGLGNPG Y NRHN GFM +D + + A+++E +L G R +L +P
Sbjct: 11 WLVAGLGNPGPTYAGNRHNAGFMVVDLLAERTGSRLKSHRSRADVAETRLAGARAVLARP 70
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+FMNLSG + +FYK+ + +V+HD+LD+ FG +RLK GGGD GHNGL+SIS
Sbjct: 71 LSFMNLSGGPVAAARSFYKV-EVSRLIVVHDELDIPFGAVRLKRGGGDNGHNGLRSISSA 129
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G ++Y R+R+GIGRPP VL +F+S ER L ++++ A S+ +L
Sbjct: 130 LGTRDYLRVRVGIGRPPGRMDPADFVLRDFTSTERRELPLLLEHAADSVEML 181
>gi|307265092|ref|ZP_07546652.1| peptidyl-tRNA hydrolase [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919890|gb|EFN50104.1| peptidyl-tRNA hydrolase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 184
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 101/159 (63%), Gaps = 4/159 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG EY RHNIGFM ID + K KF + + EG G + IL+K
Sbjct: 1 MYVIAGLGNPGKEYEGTRHNIGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG++L + +NFYK+ LEN +VI+DD DLD G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNSSGEALYDAVNFYKIL-LENVIVIYDDKDLDVGKIRIRKKGSSGGHNGMKSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+ + R+RIGIG+P ++ HVLG F E+ +
Sbjct: 120 LLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLI 156
>gi|134097415|ref|YP_001103076.1| peptidyl-tRNA hydrolase [Saccharopolyspora erythraea NRRL 2338]
gi|291004595|ref|ZP_06562568.1| peptidyl-tRNA hydrolase [Saccharopolyspora erythraea NRRL 2338]
gi|133910038|emb|CAM00150.1| peptidyl-tRNA hydrolase [Saccharopolyspora erythraea NRRL 2338]
Length = 191
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 109/175 (62%), Gaps = 2/175 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ ++ GLGNPG Y NRHNIGF+ D + + K AEI EG+L G+R +L K
Sbjct: 7 LALIVGLGNPGPRYEGNRHNIGFLVADELAARVGGKFKAHKSGAEIVEGRLGGVRAVLAK 66
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG + FYK+ + +VIHD+LDL +GT+RLK GGG+ GHNGL+SIS+
Sbjct: 67 PRSFMNLSGGPVAGAAKFYKV-QPGSLIVIHDELDLPYGTVRLKRGGGENGHNGLRSISK 125
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K+Y R+R GI RPP +VL +FS ER L +D A ++ LAK
Sbjct: 126 SLGTKDYLRVRFGIDRPPGRMDPADYVLKDFSGAERKELAYFVDLCADAVESLAK 180
>gi|56695713|ref|YP_166064.1| peptidyl-tRNA hydrolase [Ruegeria pomeroyi DSS-3]
gi|68052881|sp|Q5LV91|PTH_SILPO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56677450|gb|AAV94116.1| peptidyl-tRNA hydrolase [Ruegeria pomeroyi DSS-3]
Length = 239
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +DRI H F W+ KF +I+EG+L + +L+K
Sbjct: 1 MRLFVGLGNPGAKYARNRHNIGFMALDRIAEDHGFGPWRVKFQGQIAEGRLGREKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN SGQS+ E M FYKL + + V+HD+LDL G +++K GGG AGHNGL+SI +
Sbjct: 61 PETFMNRSGQSVGEAMRFYKL-DSTDITVLHDELDLAPGKVKVKAGGGHAGHNGLRSIHD 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y R+R+GIG P + +VL +F+ + +L ++ ++ P LA + F
Sbjct: 120 HIGAAYDRVRLGIGHPGRKEAVAGYVLHDFARADEDWLEDVLRGVSEGAPHLAAGDGARF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNSVA 184
>gi|29830107|ref|NP_824741.1| peptidyl-tRNA hydrolase [Streptomyces avermitilis MA-4680]
gi|46576777|sp|Q82HE5|PTH_STRAW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|29607217|dbj|BAC71276.1| putative peptidyl-tRNA hydrolase [Streptomyces avermitilis MA-4680]
Length = 203
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 111/178 (62%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD-----GL 54
+++ GLGNPG EY NRHN+GFM D + + +K+ K A++ EG++
Sbjct: 14 WLIVGLGNPGPEYARNRHNVGFMVAD-LLAERIGGKFKRAGKAQAQVIEGRIGPPGPANR 72
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R IL KP ++MNLSG + + FYK+P + N + +HD+LD+D+G LRLK GGGD GHNG
Sbjct: 73 RVILAKPMSYMNLSGGPVNALREFYKVP-VANIVAVHDELDIDYGVLRLKLGGGDNGHNG 131
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G +Y R+R GIGRPP + VL +F+S ER L ++D A + L
Sbjct: 132 LKSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFASAERKELDYLVDRAADAAECL 189
>gi|217967892|ref|YP_002353398.1| Aminoacyl-tRNA hydrolase [Dictyoglomus turgidum DSM 6724]
gi|217336991|gb|ACK42784.1| Aminoacyl-tRNA hydrolase [Dictyoglomus turgidum DSM 6724]
Length = 193
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 105/166 (63%), Gaps = 6/166 (3%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
+ GLGNPG+EY RHN+GFM +D + +F+ FP+++K ++ G++ + L+KPQT
Sbjct: 6 IIGLGNPGYEYANTRHNVGFMVVDYLQNFYKFPSYQKTNFNLLTFGKISNTKVYLVKPQT 65
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-ISEKC 122
+MNLSG + E + + E LVIHDDLDL GT+R+K G D GHNG+KS I E
Sbjct: 66 YMNLSGIGVKEFIEKFAFAP-EELLVIHDDLDLPIGTIRIKFNGKDGGHNGIKSIIKEIN 124
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
N+ RLRIGIG+P D I+ +VLG F+ E L I+ I +S
Sbjct: 125 TSNFYRLRIGIGKPQDKNQIVEYVLGKFNEDE----LKTIEKILQS 166
>gi|302542982|ref|ZP_07295324.1| aminoacyl-tRNA hydrolase [Streptomyces hygroscopicus ATCC 53653]
gi|302460600|gb|EFL23693.1| aminoacyl-tRNA hydrolase [Streptomyces himastatinicus ATCC 53653]
Length = 198
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 106/176 (60%), Gaps = 6/176 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD-----GLRT 56
++V GLGNPG EY NRHN+GFM + + K A++ EG++ R
Sbjct: 10 WLVVGLGNPGPEYAANRHNVGFMVAELLAERMGGRFKAHKSRAQVVEGRIGPPGPGSRRV 69
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
I+ KP +FMNLSG + +FYK+P + + IHD+LD+D+G LRLK GGGD GHNGLK
Sbjct: 70 IVAKPMSFMNLSGGPTTALRDFYKVPT-SHVIAIHDELDIDYGALRLKLGGGDNGHNGLK 128
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
SI++ G +Y R+R GIGRPP + VL +FS+ ER L +D A ++ L
Sbjct: 129 SITKSGGPDYFRIRFGIGRPPGRMDVAAFVLKDFSAAERRELDYFVDRAADAVETL 184
>gi|167036598|ref|YP_001664176.1| peptidyl-tRNA hydrolase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115025|ref|YP_004185184.1| peptidyl-tRNA hydrolase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|238687682|sp|B0KBG1|PTH_THEP3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166855432|gb|ABY93840.1| Aminoacyl-tRNA hydrolase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319928116|gb|ADV78801.1| peptidyl-tRNA hydrolase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 184
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 101/159 (63%), Gaps = 4/159 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG EY RHN+GFM ID + K KF + + EG G + IL+K
Sbjct: 1 MYVIAGLGNPGREYEGTRHNVGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTF+N SG++L + +NFYK+P LEN +VI+DD DLD G +R++ G GHNG+ SI
Sbjct: 61 PQTFVNSSGEALYDAVNFYKIP-LENVIVIYDDKDLDVGKIRIRKKGSSGGHNGMNSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+ + R+RIGIG+P ++ HVLG F E+ +
Sbjct: 120 LLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLI 156
>gi|325662343|ref|ZP_08150952.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 4_1_37FAA]
gi|325471345|gb|EGC74568.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 4_1_37FAA]
Length = 192
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 110/184 (59%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNP +Y RHN+GF IDR+ + KK A I +G +DG + IL+K
Sbjct: 1 MYIIIGLGNPTAQYEGTRHNVGFDVIDRLGEKYNIAVDTKKHKAYIGKGMIDGQKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E++++YK+ E LVI+DD+ LD G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESVRELVDYYKVDAEEEVLVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+++G+G P + +VLG+FS ER + D ++ L+ E +
Sbjct: 121 HLGTQVFPRIKVGVGEKPKNYDLADYVLGHFSKAERAQMEEGYDRATEAVRLILAGEIDA 180
Query: 180 FLNH 183
+N
Sbjct: 181 AMNQ 184
>gi|229586948|ref|YP_002845449.1| peptidyl-tRNA hydrolase [Rickettsia africae ESF-5]
gi|259535236|sp|C3PP46|PTH_RICAE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|228021998|gb|ACP53706.1| Peptidyl-tRNA hydrolase [Rickettsia africae ESF-5]
Length = 185
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 119/186 (63%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHN+GF+ I++I + ++ + KKKF+ EI+E DG + I I
Sbjct: 1 MLLVIGLGNPGKEYQYTRHNVGFIAIEKIANQYNSSFSTKKKFNCEIAETISDGQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + + VIHDD+DLD G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNIYPAK-IFVIHDDIDLDTGRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+RIG+GRP + + +VL +FS PE ++ ID I + L+ + +
Sbjct: 120 GVIGNNYNRIRIGVGRPQNNQDVADYVLNHFSKPEYETVMQAIDRITSNFGLILENKLEE 179
Query: 180 FLNHIV 185
F N I
Sbjct: 180 FKNKIA 185
>gi|326202451|ref|ZP_08192320.1| peptidyl-tRNA hydrolase [Clostridium papyrosolvens DSM 2782]
gi|325987569|gb|EGD48396.1| peptidyl-tRNA hydrolase [Clostridium papyrosolvens DSM 2782]
Length = 189
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 115/175 (65%), Gaps = 2/175 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++++ GLGNPG ++ RHN+GF ID I + + + F A EG+++G+RTIL+K
Sbjct: 4 VYLLVGLGNPGTKFENTRHNVGFDTIDYISAKYNIKLSRIGFKAVYGEGEIEGVRTILVK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E++++YKLP +E +VI+DD+DL+ G +R++ G HNG+KSI
Sbjct: 64 PQTFMNLSGESVREIVDWYKLP-VERLVVIYDDIDLEPGKIRVRPKGSSGTHNGMKSIIY 122
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ + + R+RIGIGR P+ + +VL FS +R + ++ A++ + AK
Sbjct: 123 QLQDDRFPRVRIGIGRAPEKWDLADYVLSKFSKEDRQVIDQSVEKAAQAAIMTAK 177
>gi|251779900|ref|ZP_04822820.1| aminoacyl-tRNA hydrolase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243084215|gb|EES50105.1| aminoacyl-tRNA hydrolase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 191
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 113/183 (61%), Gaps = 4/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHNIGF ID I + + ++KF EG + + IL+K
Sbjct: 1 MFLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFKGVYGEGFIANNKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG S+ EV NFYK+ N EN +VI+DD+ LD G LR++ G GHNG+KSI
Sbjct: 61 PTTYMNLSGDSVREVANFYKISN-ENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+++G+G+P D +++ +VLG FS E+ L I+ S+ + K++ S
Sbjct: 120 NLSTDVFPRIKVGVGQPND--NLVDYVLGKFSKEEKEVLKESIEAATNSVEEIIKQDVNS 177
Query: 180 FLN 182
+N
Sbjct: 178 AMN 180
>gi|308066874|ref|YP_003868479.1| Peptidyl-tRNA hydrolase (PTH) [Paenibacillus polymyxa E681]
gi|305856153|gb|ADM67941.1| Peptidyl-tRNA hydrolase (PTH) [Paenibacillus polymyxa E681]
Length = 186
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 110/170 (64%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y + RHN+GFM +D + S H + K A I EG + G++T+LIK
Sbjct: 1 MKWIVGLGNPGPQYEKTRHNVGFMALDALASRHNIQINQSKCKALIGEGHIGGVKTVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+SL M++YK ++E+ +V++DDLD + G +RL+ G GHNG+KSI +
Sbjct: 61 PMTYMNLSGESLRAYMDYYK-ADMEDLVVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +++ R+R+GI RP I+ +VLG F E+ L +I++ +L
Sbjct: 120 HTGTQSFNRIRMGISRPEPGHAIVDYVLGTFPKKEKDLLAGMIEDTCNAL 169
>gi|163847223|ref|YP_001635267.1| peptidyl-tRNA hydrolase [Chloroflexus aurantiacus J-10-fl]
gi|222525064|ref|YP_002569535.1| peptidyl-tRNA hydrolase [Chloroflexus sp. Y-400-fl]
gi|189038282|sp|A9WBS1|PTH_CHLAA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783861|sp|B9LE93|PTH_CHLSY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|163668512|gb|ABY34878.1| Aminoacyl-tRNA hydrolase [Chloroflexus aurantiacus J-10-fl]
gi|222448943|gb|ACM53209.1| Aminoacyl-tRNA hydrolase [Chloroflexus sp. Y-400-fl]
Length = 188
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 110/184 (59%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG Y RHNIGF +D + H ++ +++++EG + G R +L K
Sbjct: 1 MWLIVGLGNPGERYARTRHNIGFRSVDTLAERHGLTFRPQRANSQLAEGNIYGQRVVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQ+++ + N+YK+ LVI+DDLDL F LR++ G HNG++SI
Sbjct: 61 PQTYMNLSGQAVVALCNWYKIDPARELLVIYDDLDLPFAKLRIRERGSAGTHNGMRSIVA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + RLR+GIG+PP +VLG F+ E L ++ IA ++ ++ + +
Sbjct: 121 QLGTTEFPRLRVGIGQPPGKMDAADYVLGRFTPDEEAALPDLLGRIADAVEVILREGLTT 180
Query: 180 FLNH 183
+N
Sbjct: 181 AMNR 184
>gi|315638228|ref|ZP_07893410.1| aminoacyl-tRNA hydrolase [Campylobacter upsaliensis JV21]
gi|315481764|gb|EFU72386.1| aminoacyl-tRNA hydrolase [Campylobacter upsaliensis JV21]
Length = 181
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 114/190 (60%), Gaps = 12/190 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW--KKKFHAEISEGQLDGLRTIL 58
M +V GLGN G EY RHN+GFM ID I S KF E+ ++D ++L
Sbjct: 1 MTLVVGLGNIGREYENTRHNVGFMLIDMILSEENQARILSHSKFKGELY--KIDS--SLL 56
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MN SG S+ V +FYK L +VIHDD+DL+ GTLR K GG GHNGLKSI
Sbjct: 57 LKPHTYMNHSGISVKAVCDFYKCERL---IVIHDDIDLNLGTLRFKKGGSSGGHNGLKSI 113
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
CG NY+R+RIG+GR DT I HVLG F+S E+ L I+ +L L + +D+
Sbjct: 114 DHLCGNNYERVRIGVGRGKDT---ISHVLGQFTSEEKVVLGEILLRAKEALFALMQGDDL 170
Query: 179 SFLNHIVSVR 188
+ ++ + S R
Sbjct: 171 AKISSLYSFR 180
>gi|188588535|ref|YP_001919597.1| peptidyl-tRNA hydrolase [Clostridium botulinum E3 str. Alaska E43]
gi|238689626|sp|B2UXS9|PTH_CLOBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|188498816|gb|ACD51952.1| peptidyl-tRNA hydrolase [Clostridium botulinum E3 str. Alaska E43]
Length = 191
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 113/183 (61%), Gaps = 4/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHNIGF ID I + + ++KF EG + + IL+K
Sbjct: 1 MFLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFKGVYGEGFIANNKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG S+ EV NFYK+ N EN +VI+DD+ LD G LR++ G GHNG+KSI
Sbjct: 61 PTTYMNLSGDSVREVANFYKISN-ENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+++G+G+P D +++ +VLG FS E+ L I+ S+ + K++ S
Sbjct: 120 NLSTDVFPRIKVGVGQPND--NLVDYVLGKFSKEEKEVLKESIEAATNSVEEIIKQDINS 177
Query: 180 FLN 182
+N
Sbjct: 178 AMN 180
>gi|329115063|ref|ZP_08243818.1| Peptidyl-tRNA hydrolase [Acetobacter pomorum DM001]
gi|326695506|gb|EGE47192.1| Peptidyl-tRNA hydrolase [Acetobacter pomorum DM001]
Length = 197
Score = 144 bits (362), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP +RHN+GFM ++ I + F W+ +F E++EG++ + +L+
Sbjct: 5 MLLWVGLGNPESSMRRHRHNVGFMAVEAIARKYGFTPWRNRFKGEVAEGRIGRQKVLLLL 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ E FYK+ EN V HD+LDL G LR+K GGG AGHNGL+S +
Sbjct: 65 PMTYMNKSGESVQEAAAFYKIAP-ENITVFHDELDLAPGRLRIKRGGGAAGHNGLRSTDK 123
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERY-FLLPIIDNIARSLPLLAKREDV 178
G Y R+RIGIG P + VLGNF+ +R +L ++D +A + PLLA
Sbjct: 124 MLGTPEYWRVRIGIGHPGVKERVHGWVLGNFTETDRQEWLERLLDRMADAAPLLADGRAD 183
Query: 179 SFLNHIV 185
F+ +
Sbjct: 184 QFMTKVA 190
>gi|237741390|ref|ZP_04571871.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 4_1_13]
gi|229430922|gb|EEO41134.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 4_1_13]
Length = 191
Score = 144 bits (362), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 105/167 (62%), Gaps = 5/167 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNP +Y RHN+GF+ +D + ++KF A +SE +DG + I K
Sbjct: 1 MRVVIGLGNPDKKYERTRHNMGFIVVDSLRKKLNINDEREKFQALVSEKNIDGDKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG +++E++NFYKL ++ +VI+DD+DL FG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNAVIEIINFYKLDPKKDIIVIYDDMDLSFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL---LPIIDN 164
G+ + R++ GIG A + HVLG F+ E+ L L I+DN
Sbjct: 121 HIGEEFIRIKCGIGAKEKDA--VEHVLGEFNQTEQKELDEILEIVDN 165
>gi|297157757|gb|ADI07469.1| peptidyl-tRNA hydrolase [Streptomyces bingchenggensis BCW-1]
Length = 196
Score = 144 bits (362), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 106/176 (60%), Gaps = 6/176 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG-----LRT 56
++V GLGNPG EY NRHN+GFM D + K A++ EG++ R
Sbjct: 8 WLVVGLGNPGPEYAANRHNVGFMVADLLADRMRGRFKAHKSRAQVVEGRVGAPGPASRRV 67
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
I+ KP +FMNLSG + +FYK+P + + + +HD+LD+D+G LRLK GGGD GHNGLK
Sbjct: 68 IVAKPMSFMNLSGGPTTALRDFYKVP-VGHVIAVHDELDIDYGALRLKLGGGDNGHNGLK 126
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
SI++ +Y R+R GIGRPP + VL +FS+ ER L +D A ++ L
Sbjct: 127 SITKSLSPDYFRVRFGIGRPPGRMDVAAFVLKDFSAAERKELDYFVDRAADAVETL 182
>gi|157964746|ref|YP_001499570.1| peptidyl-tRNA hydrolase [Rickettsia massiliae MTU5]
gi|157844522|gb|ABV85023.1| Peptidyl-tRNA hydrolase [Rickettsia massiliae MTU5]
Length = 187
Score = 144 bits (362), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 119/186 (63%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHN+GF+ I++I + ++ + KKKF+ EI+E DG + I I
Sbjct: 3 MILVIGLGNPGKEYQYTRHNVGFIAIEKIANQYNSSFSTKKKFNCEIAETISDGQKIIFI 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V Y + + VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 63 KPTTYMNLSGKSVISVKTCYNI-HPAKIFVIHDDIDLETGRIKFKTGGGNGGHNGLKSID 121
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+RIG+GRP + + +VL NFS PE ++ ID + + L+ + +
Sbjct: 122 GVIGNNYNRIRIGVGRPQNNQDVADYVLNNFSKPEYETVMQAIDRVTSNFGLILENKLEE 181
Query: 180 FLNHIV 185
F N IV
Sbjct: 182 FKNKIV 187
>gi|68171277|ref|ZP_00544678.1| Peptidyl-tRNA hydrolase [Ehrlichia chaffeensis str. Sapulpa]
gi|88658161|ref|YP_506969.1| peptidyl-tRNA hydrolase [Ehrlichia chaffeensis str. Arkansas]
gi|119390940|sp|Q2GHW4|PTH_EHRCR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|67999292|gb|EAM85940.1| Peptidyl-tRNA hydrolase [Ehrlichia chaffeensis str. Sapulpa]
gi|88599618|gb|ABD45087.1| peptidyl-tRNA hydrolase [Ehrlichia chaffeensis str. Arkansas]
Length = 198
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 124/192 (64%), Gaps = 7/192 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG +Y +RHN GFM +D I S +FP+++++ +A IS G + R IL+KP
Sbjct: 3 YLLAGLGNPGKKYELSRHNAGFMIVDAIASEFYFPSFRERHNALISIGNIKSHRVILVKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ + + YK+P L+N ++ HD+++++F T+R+K GG+AGHNGLKSI
Sbjct: 63 WTFMNNSGAPIMSIASLYKIP-LDNIIIFHDEVEINFCTIRVKKSGGNAGHNGLKSIDNL 121
Query: 122 CGKNYKRLRIGIGRPPDTAH----IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
GK+Y R+R GIGRP + + + +VL F + + + I NI + LL +++
Sbjct: 122 LGKDYWRVRFGIGRPINKTNLKIDLSYYVLSQFHNIKA--VNNTILNIVEHITLLLEKKP 179
Query: 178 VSFLNHIVSVRK 189
F+ + ++ K
Sbjct: 180 SMFMEKVKNLIK 191
>gi|167629343|ref|YP_001679842.1| peptidyl-tRNA hydrolase [Heliobacterium modesticaldum Ice1]
gi|167592083|gb|ABZ83831.1| peptidyl-tRNA hydrolase [Heliobacterium modesticaldum Ice1]
Length = 225
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 109/182 (59%), Gaps = 4/182 (2%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
+ GLGNPG +Y RHNIGFM +DR+ ++ +F SE +++G + +L+KPQT
Sbjct: 31 IVGLGNPGLQYARTRHNIGFMVVDRLAEAWGAEGFRDRFQGLCSEARVEGEKVLLLKPQT 90
Query: 64 FMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
+MNLSGQS+ + FYK LP E+ LVI+DD+DL G LR + GG GHNG+KSI
Sbjct: 91 YMNLSGQSVAALAVFYKLLP--EDILVIYDDMDLKLGRLRARAKGGSGGHNGMKSIIGLL 148
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G + + RL++GIGRP D HVL +F+ E+ + ++D + L + + +
Sbjct: 149 GTEAFPRLKMGIGRPADRRLAAAHVLESFTEEEQETVRAMLDQGREAAALWVDKGIIEVM 208
Query: 182 NH 183
N
Sbjct: 209 NR 210
>gi|238926854|ref|ZP_04658614.1| aminoacyl-tRNA hydrolase [Selenomonas flueggei ATCC 43531]
gi|238885386|gb|EEQ49024.1| aminoacyl-tRNA hydrolase [Selenomonas flueggei ATCC 43531]
Length = 208
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 108/173 (62%), Gaps = 9/173 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG EY +HN+GFM ID + AWK+ F + ++E ++ G + L+K
Sbjct: 1 MKLIAGLGNPGAEYANTKHNVGFMLIDALAEHLNVSAWKEDFSSSVAEARIGGEKIFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ ++++YKL + E+ +V+HDD+D+ GT+R++ G GHNG+KSI
Sbjct: 61 PLTYMNNSGEAIGPMLSYYKLSS-EDLIVVHDDMDIPVGTVRIRKKGSSGGHNGIKSILS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER-------YFLLPIIDNI 165
G + R+RIGIGRPP +I HVL F+ + +LLP + I
Sbjct: 120 HVGSEAFARVRIGIGRPPAGWTVINHVLAPFAPEDTPKIRETIAYLLPAVTCI 172
>gi|255659622|ref|ZP_05405031.1| aminoacyl-tRNA hydrolase [Mitsuokella multacida DSM 20544]
gi|260848183|gb|EEX68190.1| aminoacyl-tRNA hydrolase [Mitsuokella multacida DSM 20544]
Length = 216
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 108/166 (65%), Gaps = 4/166 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA--WKKKFHAEISEGQLDGLRTIL 58
M I+AGLGNPG EY + +HN+GFM ID + A WK KF A++++ ++ + +L
Sbjct: 1 MKIIAGLGNPGAEYAKTKHNVGFMFIDALADALGLSASDWKDKFEAKVADARIGTEKVVL 60
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KPQT+MN SG+++ +MN+YKL E+ +V+HDD+D+ GT+R++ G GHNG+KSI
Sbjct: 61 VKPQTYMNESGRAVGPLMNWYKLAP-EDLIVVHDDMDIPAGTIRIRKKGSAGGHNGIKSI 119
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G +++ R+RIGIGRP ++ HVL F E+ + ID
Sbjct: 120 LAHVGDEHFARVRIGIGRPLPGWTVVNHVLAGFPEEEQPKIREAID 165
>gi|57242054|ref|ZP_00369994.1| peptidyl-tRNA hydrolase [Campylobacter upsaliensis RM3195]
gi|57017246|gb|EAL54027.1| peptidyl-tRNA hydrolase [Campylobacter upsaliensis RM3195]
Length = 181
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 114/190 (60%), Gaps = 12/190 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW--KKKFHAEISEGQLDGLRTIL 58
M +V GLGN G EY RHN+GFM ID I S KF E+ ++D ++L
Sbjct: 1 MTLVVGLGNIGREYENTRHNVGFMLIDMILSEENQAKILSHSKFKGELY--KIDS--SLL 56
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MN SG S+ V +FYK L +VIHDD+DL+ GTLR K GG GHNGLKSI
Sbjct: 57 LKPHTYMNHSGISVKAVCDFYKCERL---IVIHDDIDLNLGTLRFKKGGSSGGHNGLKSI 113
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
CG NY+R+RIG+GR DT I HVLG F+S E+ L I+ +L L + +++
Sbjct: 114 DHLCGNNYERVRIGVGRGKDT---ISHVLGQFTSEEKVILGEILLRAKEALFALMQGDNL 170
Query: 179 SFLNHIVSVR 188
S ++ + S R
Sbjct: 171 SKISSLYSFR 180
>gi|58584354|ref|YP_197927.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|68052872|sp|Q5GTI9|PTH_WOLTR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|58418670|gb|AAW70685.1| Peptidyl-tRNA hydrolase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 182
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 116/185 (62%), Gaps = 3/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y HNIGF+ +D I F ++ KK I+ ++ + +L+K
Sbjct: 1 MHLIVGLGNPGSQYELTYHNIGFIIVDAICKHWNFQSFSKKADCLITSSVINDNKIMLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +FMN SG + + NFYK +L+N +VIHDD DL+ G +++K GGG AGHNGLKSI
Sbjct: 61 PYSFMNNSGIPVARIRNFYKF-SLDNVIVIHDDADLEPGRIKIKKGGGSAGHNGLKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLR GIGR + +VL FS+ + ++P+++ IA+++ L+ + +++F
Sbjct: 120 SIGNDYWRLRFGIGRSDSQRSLADYVLSKFSNLDD--VIPLVERIAQNIHLMLQGNNIAF 177
Query: 181 LNHIV 185
N IV
Sbjct: 178 TNSIV 182
>gi|253582592|ref|ZP_04859813.1| peptidyl-tRNA hydrolase [Fusobacterium varium ATCC 27725]
gi|251835462|gb|EES64002.1| peptidyl-tRNA hydrolase [Fusobacterium varium ATCC 27725]
Length = 186
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 100/166 (60%), Gaps = 2/166 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHNIGF I ++ K KF +SE +DG + + +K
Sbjct: 1 MKLVVGLGNPGDKYAKTRHNIGFEVISKLQEELNIVGEKDKFQGLLSEKNIDGEKVLFLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG S+ V+NFYK+ ++ +VI+DD+DL G LR+K G GHNG+KSI
Sbjct: 61 PQTFMNLSGNSIAAVVNFYKIDAKKDMIVIYDDMDLPVGKLRVKEKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
G + R++ GIG+ D I VLG F E+ + +I+N A
Sbjct: 121 HLGDEFLRIKCGIGKSKDDT--IDFVLGQFDKSEQEVVDKMIENAA 164
>gi|312864107|ref|ZP_07724342.1| aminoacyl-tRNA hydrolase [Streptococcus vestibularis F0396]
gi|311100339|gb|EFQ58547.1| aminoacyl-tRNA hydrolase [Streptococcus vestibularis F0396]
Length = 189
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 109/177 (61%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y E RHN+GFM ID I + +K F AE++ L+G + +KP
Sbjct: 4 LVVGLGNPGSKYHETRHNVGFMAIDLIAKKLGLTFSEEKTFKAEVASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ ++ +Y +P +E+++VI+DDLD++ G LR + G GHNG+KSI +
Sbjct: 64 TTFMNLSGLAVRALLAYYNIP-MEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAE 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R++IGIGRP ++ HVLG FS + +L +D + +L K D
Sbjct: 123 TGTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYATILLTLDKVETALNHYLKTND 179
>gi|310639512|ref|YP_003944270.1| peptidyl-tRNA hydrolase [Paenibacillus polymyxa SC2]
gi|309244462|gb|ADO54029.1| Peptidyl-tRNA hydrolase [Paenibacillus polymyxa SC2]
Length = 186
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 109/170 (64%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y + RHN+GFM +D + H + K A I EG + G++T+LIK
Sbjct: 1 MKWIVGLGNPGPQYEKTRHNVGFMALDALALRHNIQITQSKCKALIGEGHIGGVKTVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+SL M++YK ++E+ +V++DDLD + G +RL+ G GHNG+KSI +
Sbjct: 61 PMTYMNLSGESLRAYMDYYK-ADMEDLIVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +++ R+R+GI RP I+ +VLG F E+ L +I++ +L
Sbjct: 120 HTGTQSFNRIRMGISRPEPGHAIVDYVLGTFPKKEKELLTGMIEDTCNAL 169
>gi|304436451|ref|ZP_07396425.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370497|gb|EFM24148.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 208
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 108/173 (62%), Gaps = 9/173 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG EY +HN+GFM ID + AWK+ F + ++E ++ G + L+K
Sbjct: 1 MKLIAGLGNPGAEYANTKHNVGFMLIDALAEHLNVSAWKEYFSSSVAEARIGGEKIFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ ++++YKL + E+ +V+HDD+D+ GT+R++ G GHNG+KSI
Sbjct: 61 PLTYMNNSGEAIGPMLSYYKLSS-EDLIVVHDDMDIPVGTVRIRKKGSSGGHNGIKSILS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER-------YFLLPIIDNI 165
G + R+RIGIGRPP +I HVL F+ + +LLP + I
Sbjct: 120 HVGSEAFARVRIGIGRPPAGWTVINHVLAPFAPEDTPKIREAIAYLLPAVTCI 172
>gi|325288388|ref|YP_004264569.1| peptidyl-tRNA hydrolase [Syntrophobotulus glycolicus DSM 8271]
gi|324963789|gb|ADY54568.1| peptidyl-tRNA hydrolase [Syntrophobotulus glycolicus DSM 8271]
Length = 185
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 113/185 (61%), Gaps = 4/185 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M V GLGNPG +Y + RHN+GFM +DRI + K F + +E + + IL+K
Sbjct: 1 MKAVIGLGNPGIKYADTRHNVGFMLLDRIAGNEDVQ-YSKGFKGKFAEIRHQNRKIILLK 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E++N+YK+P LE+ LVIHDD+D+ G LR + G GHNG+KSI +
Sbjct: 60 PYTFMNLSGQSVAELINYYKVP-LEDMLVIHDDMDIALGRLRFREKGSAGGHNGIKSIIQ 118
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL-LAKREDV 178
+ G + + RL+IG+GRP ++ HVL F R L ++ +++ L L +E
Sbjct: 119 ELGTQEFWRLKIGVGRPQKERDVVSHVLSGFDRESREVLSETLEKARKAVFLWLEGKEAE 178
Query: 179 SFLNH 183
+ N+
Sbjct: 179 AMQNY 183
>gi|157826866|ref|YP_001495930.1| peptidyl-tRNA hydrolase [Rickettsia bellii OSU 85-389]
gi|166229444|sp|A8GVL6|PTH_RICB8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157802170|gb|ABV78893.1| peptidyl-tRNA hydrolase [Rickettsia bellii OSU 85-389]
Length = 185
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 116/186 (62%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG EY RHNIGF+ ++ I + + KKKFH EI+E +G + I +
Sbjct: 1 MMLIIGLGNPGKEYEHTRHNIGFIALENIAKQYETSFSVKKKFHCEIAESTNNGQKLIFV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y +P LE VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVIAVKTYYNIP-LEKIFVIHDDIDLELGKIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
NY R+RIG+GRP ++ + +VL NFS E ID I + L+ + +
Sbjct: 120 GIIENNYHRIRIGVGRPQNSQDVADYVLNNFSKTEYVIAEQAIDKITDNFNLILENKLEE 179
Query: 180 FLNHIV 185
F + +V
Sbjct: 180 FKSKMV 185
>gi|302519767|ref|ZP_07272109.1| peptidyl-tRNA hydrolase [Streptomyces sp. SPB78]
gi|302428662|gb|EFL00478.1| peptidyl-tRNA hydrolase [Streptomyces sp. SPB78]
Length = 267
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 112/181 (61%), Gaps = 9/181 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHA--EISEGQL-----DGL 54
++VAGLGNPG EY NRHN+GF+ D + + +K+ A ++ EG+L
Sbjct: 13 WLVAGLGNPGPEYAGNRHNVGFVVADLLAA-RLGGRFKRAARARAQVVEGRLGVPGVSST 71
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R ++ KP ++MNLSG + + +FYK+P LE + +HD+LD+D+G LRLK GGGD GHNG
Sbjct: 72 RVVVAKPLSYMNLSGGPVTALRDFYKVP-LERVVAVHDELDIDYGVLRLKLGGGDNGHNG 130
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
LKS+++ G Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 131 LKSMTKAMGPAYHRVRFGIGRPPGRMQVADFVLKDFSSSERKELDYFVDRAADAVEALVT 190
Query: 175 R 175
+
Sbjct: 191 Q 191
>gi|55820108|ref|YP_138550.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus LMG 18311]
gi|55821998|ref|YP_140439.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus CNRZ1066]
gi|116626978|ref|YP_819597.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus LMD-9]
gi|68052882|sp|Q5M222|PTH_STRT1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052883|sp|Q5M6L4|PTH_STRT2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|122268417|sp|Q03N21|PTH_STRTD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|55736093|gb|AAV59735.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus LMG 18311]
gi|55737983|gb|AAV61624.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus CNRZ1066]
gi|116100255|gb|ABJ65401.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus LMD-9]
gi|312277423|gb|ADQ62080.1| Peptidyl-tRNA hydrolase [Streptococcus thermophilus ND03]
Length = 189
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 109/177 (61%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y E RHN+GFM ID + + +K F AE++ L+G + +KP
Sbjct: 4 LVVGLGNPGSKYHETRHNVGFMAIDLMAKELGLTFSEEKTFKAEVASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ ++ +Y +P +E+++VI+DDLD++ G LR + G GHNG+KSI +
Sbjct: 64 TTFMNLSGLAVRALLAYYNIP-MEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAE 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R++IGIGRP ++ HVLG FS + +L +D + +L K D
Sbjct: 123 TGTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYAMILLTLDKVETALHHYLKTND 179
>gi|331086146|ref|ZP_08335228.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330406305|gb|EGG85819.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 192
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 109/184 (59%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNP +Y RHN+GF IDR+ + KK A I +G +DG + +L+K
Sbjct: 1 MYIIIGLGNPTAQYEGTRHNVGFDVIDRLGEKYNIAVDTKKHKAYIGKGMIDGQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E++ +YK+ E LVI+DD+ LD G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESVRELVEYYKVDAEEEVLVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+++G+G P + +VLG+FS ER + D ++ L+ E +
Sbjct: 121 HLGTQVFPRIKVGVGEKPKNYDLADYVLGHFSKAERAQMEDGYDRATEAVRLILAGEIDA 180
Query: 180 FLNH 183
+N
Sbjct: 181 AMNQ 184
>gi|157803534|ref|YP_001492083.1| peptidyl-tRNA hydrolase [Rickettsia canadensis str. McKiel]
gi|166229445|sp|A8EY65|PTH_RICCK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157784797|gb|ABV73298.1| peptidyl-tRNA hydrolase [Rickettsia canadensis str. McKiel]
Length = 185
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 116/185 (62%), Gaps = 2/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M V GLGNPG EY RHNIGF+ I++I + ++ + KKKF+ EI E ++ + I I
Sbjct: 1 MIFVIGLGNPGKEYQYTRHNIGFIVIEKIANQYNLSFSTKKKFNCEIVESSVEKQKLIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + + E VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNICS-EKIFVIHDDIDLETGRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+RIG+GRP + + +VL NF E ++ ID I + L+ + +
Sbjct: 120 RVIGNNYNRIRIGVGRPQNNQDVADYVLNNFPRSEYEIVIQSIDKITNNFDLILENKLEE 179
Query: 180 FLNHI 184
F N I
Sbjct: 180 FKNKI 184
>gi|111225610|ref|YP_716404.1| peptidyl-tRNA hydrolase [Frankia alni ACN14a]
gi|123142574|sp|Q0RCD6|PTH_FRAAA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|111153142|emb|CAJ64889.1| Peptidyl-tRNA hydrolase (PTH) [Frankia alni ACN14a]
Length = 197
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 110/172 (63%), Gaps = 2/172 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG Y NRHN GFM +D + + A+++E +L G R IL +P
Sbjct: 11 WLVVGLGNPGPGYAGNRHNAGFMVVDLLAERAGSRLKSHRSRADVAEVRLAGTRAILARP 70
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+FMNLSG + V FYK+ + +V+HD+LD+ FG++RLK GGGD GHNGL+SIS
Sbjct: 71 LSFMNLSGGPVSAVRTFYKI-DPARVIVVHDELDIPFGSVRLKRGGGDNGHNGLRSISSA 129
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G ++Y R+R+GIGRPP +VL +F++ ER L ++++ A S+ +L
Sbjct: 130 LGTRDYLRVRVGIGRPPGRMDPADYVLRDFAAAERRELPLLLEHSADSVEML 181
>gi|99080055|ref|YP_612209.1| peptidyl-tRNA hydrolase [Ruegeria sp. TM1040]
gi|119391009|sp|Q1GK69|PTH_SILST RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|99036335|gb|ABF62947.1| peptidyl-tRNA hydrolase [Ruegeria sp. TM1040]
Length = 248
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D+I S H F WK KF A++SEG L G + IL+K
Sbjct: 1 MKLFVGLGNPGAKYAGNRHNIGFMALDQIASDHGFSPWKSKFQAQMSEGTLSGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SGQS+ E + F+KL + +V HD+LDL R+K GGG AGHNGL+SI
Sbjct: 61 PQTFMNNSGQSVGEALRFFKL-TPADVVVFHDELDLAPSKCRVKNGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F ++ +L ++ ++ LA + F
Sbjct: 120 HIGADYGRVRLGVGHPGHKDAVAGYVLRDFPKADQGWLDDLMRGLSDGAAALATGDSGRF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|15892854|ref|NP_360568.1| peptidyl-tRNA hydrolase [Rickettsia conorii str. Malish 7]
gi|21263852|sp|Q92H41|PTH_RICCN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|15620040|gb|AAL03469.1| peptidyl-tRNA hydrolase [Rickettsia conorii str. Malish 7]
Length = 185
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 119/185 (64%), Gaps = 2/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHN+GF+ I++I + ++ + KKKF+ EI+E DG + I I
Sbjct: 1 MLLVIGLGNPGKEYQYTRHNVGFIAIEKIVNQYNSSFSTKKKFNCEIAETISDGQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + + VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNIYPAK-IFVIHDDIDLETGRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+RIG+GRP + + +VL +FS PE ++ ID I + L+ + +
Sbjct: 120 GVIGNNYNRIRIGVGRPQNNQGVADYVLNHFSKPEYETVMQAIDRITSNFGLILENKLEE 179
Query: 180 FLNHI 184
F N I
Sbjct: 180 FKNKI 184
>gi|256389403|ref|YP_003110967.1| peptidyl-tRNA hydrolase [Catenulispora acidiphila DSM 44928]
gi|256355629|gb|ACU69126.1| peptidyl-tRNA hydrolase [Catenulispora acidiphila DSM 44928]
Length = 198
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 112/185 (60%), Gaps = 4/185 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD--GLRTIL 58
++++AGLGNPG Y NRHN GFM +D + + K A++ EG+L G R +L
Sbjct: 10 LWLIAGLGNPGPGYAGNRHNAGFMVVDLLAARVGGKFKSHKARADVVEGRLGVGGPRVVL 69
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
KP+TFMNLSG + + +FYK+ + + +HD+LD+D+G LRLK GGGD GHNGL+SI
Sbjct: 70 AKPKTFMNLSGGPVKALRDFYKIEPAQ-IIAVHDELDVDYGVLRLKLGGGDNGHNGLRSI 128
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+ G K Y R+R G+GRPP VL +FSS E+ L +D A ++ L +R
Sbjct: 129 TSSLGTKEYHRVRFGVGRPPGRQDPADFVLKDFSSTEKKDLDYNVDRAADAVEDLIRRGL 188
Query: 178 VSFLN 182
V N
Sbjct: 189 VEAQN 193
>gi|323340105|ref|ZP_08080370.1| aminoacyl-tRNA hydrolase [Lactobacillus ruminis ATCC 25644]
gi|323092482|gb|EFZ35089.1| aminoacyl-tRNA hydrolase [Lactobacillus ruminis ATCC 25644]
Length = 187
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 102/156 (65%), Gaps = 3/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY E RHN GFM IDR H F K+KF A I++G ++G + IL K
Sbjct: 1 MKLIVGLGNIGKEYDETRHNAGFMTIDRFAEKHAFEFNKQKFDAMIADGIINGEKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ ++++FYKL N E+ L++HDD+DL G LRL+ G GHNG+KSI
Sbjct: 61 PTTYMNESGRSVRQIVDFYKL-NPEDVLIVHDDMDLATGRLRLRQKGSAGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + +KRLRIGI P ++ VL FSS +R
Sbjct: 120 HLGTEKFKRLRIGIDHPA-KQKVVDWVLTRFSSDQR 154
>gi|162455218|ref|YP_001617585.1| hypothetical protein sce6936 [Sorangium cellulosum 'So ce 56']
gi|189038167|sp|A9GXK1|PTH_SORC5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|161165800|emb|CAN97105.1| pth [Sorangium cellulosum 'So ce 56']
Length = 223
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 112/185 (60%), Gaps = 4/185 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY +RHN+GFM ID + +++KF + ++ G + IL+K
Sbjct: 1 MLLVVGLGNPGKEYAAHRHNVGFMAIDALADEVRADPFREKFSGVHARAEIAGQQAILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ M F+K+ E +V+HD+LDL FGT+RLK GGG AGHNGL+SI
Sbjct: 61 PMTYMNESGRSVQPAMAFFKVAPSE-LIVLHDELDLPFGTVRLKVGGGHAGHNGLRSIIS 119
Query: 121 KCGK-NYKRLRIGIGRPPD--TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G N+ R+R+G+GRPP + +VL F + ER L + +S+ +A R
Sbjct: 120 HGGTGNFGRVRLGVGRPPAGFRGEVADYVLSGFDAVERASLPDCLKQAVQSVLEVAARGF 179
Query: 178 VSFLN 182
+ +N
Sbjct: 180 EAAMN 184
>gi|228476795|ref|ZP_04061443.1| peptidyl-tRNA hydrolase [Streptococcus salivarius SK126]
gi|228251532|gb|EEK10669.1| peptidyl-tRNA hydrolase [Streptococcus salivarius SK126]
Length = 189
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 109/177 (61%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y E RHN+GFM ID + + +K F AE++ L+G + +KP
Sbjct: 4 LVVGLGNPGSKYHETRHNVGFMAIDLMAKELGLTFSEEKTFKAEVASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ ++ +Y +P +E+++VI+DDLD++ G LR + G GHNG+KSI +
Sbjct: 64 TTFMNLSGLAVRALLAYYNIP-VEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAE 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R++IGIGRP ++ HVLG FS + +L +D + +L K D
Sbjct: 123 TGTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYATILLTLDKVETALNHYLKTND 179
>gi|238922869|ref|YP_002936382.1| aminoacyl-tRNA hydrolase [Eubacterium rectale ATCC 33656]
gi|259535182|sp|C4ZBV8|PTH_EUBR3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238874541|gb|ACR74248.1| aminoacyl-tRNA hydrolase [Eubacterium rectale ATCC 33656]
gi|291523767|emb|CBK89354.1| peptidyl-tRNA hydrolase [Eubacterium rectale DSM 17629]
gi|291528768|emb|CBK94354.1| peptidyl-tRNA hydrolase [Eubacterium rectale M104/1]
Length = 186
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 108/183 (59%), Gaps = 1/183 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNP +Y RHNIGF ID + + KK A G ++G++ +L+K
Sbjct: 1 MYVIVGLGNPDKKYEHTRHNIGFDVIDALADKYNISVTDKKHKALCGSGVIEGMKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ EVMNFYKL E +VI DD+ L+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNLSGESVAEVMNFYKLDPDEEMIVIFDDISLEPGRIRIRKKGSAGGHNGIKSIIA 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G P + HVLG FSS +R + I + + L+ + E
Sbjct: 121 MTGTQGFSRIKVGVGEKPQGWDLADHVLGRFSSEDRAKVEEAIGHAMDAAVLMMQGETDK 180
Query: 180 FLN 182
+N
Sbjct: 181 AMN 183
>gi|317126793|ref|YP_004093075.1| peptidyl-tRNA hydrolase [Bacillus cellulosilyticus DSM 2522]
gi|315471741|gb|ADU28344.1| peptidyl-tRNA hydrolase [Bacillus cellulosilyticus DSM 2522]
Length = 204
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 111/183 (60%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHN+GF IDR + KF ++G + L+K
Sbjct: 20 MKLVVGLGNPGSKYDGTRHNVGFEVIDRCQQLFQLDLDQSKFKGIYGYKVIEGEKIFLLK 79
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S++ +M ++K+P E+ LVI+DDLDL G +RL+ GG GHNG+KSI
Sbjct: 80 PLTFMNLSGESVIPLMKYFKIPT-EDLLVIYDDLDLAPGKIRLRQKGGAGGHNGMKSIIS 138
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+RIGIGRPP + +VLG+FS+ ER + I+ A+++ K ++
Sbjct: 139 HLGTEEFNRIRIGIGRPPKGYAVPDYVLGSFSNEERNAVDESIETAAKAVDAWTKDSFIN 198
Query: 180 FLN 182
+N
Sbjct: 199 VMN 201
>gi|219849378|ref|YP_002463811.1| peptidyl-tRNA hydrolase [Chloroflexus aggregans DSM 9485]
gi|254783860|sp|B8G3X3|PTH_CHLAD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219543637|gb|ACL25375.1| Aminoacyl-tRNA hydrolase [Chloroflexus aggregans DSM 9485]
Length = 188
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 105/184 (57%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG Y RHNIGF ++ + H ++ +EI+EG + G R L+K
Sbjct: 1 MWLIVGLGNPGERYARTRHNIGFRSVETLAERHGLTFRNQRAKSEIAEGIIRGQRVALVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQ++ + +YK+ LVI+DDLDL F LRL+ G HNG++SI
Sbjct: 61 PQTYMNLSGQAVAALRQWYKIDPARELLVIYDDLDLPFAKLRLRERGSAGTHNGMRSIVG 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + RLRIGIG+PP +VL F+ E L ++ +A ++ ++ +
Sbjct: 121 QLGTTEFPRLRIGIGQPPGQMDAADYVLSRFTPEEEAVLPEVLARVADAVEVVVSEGLTA 180
Query: 180 FLNH 183
+N
Sbjct: 181 AMNR 184
>gi|28209961|ref|NP_780905.1| peptidyl-tRNA hydrolase [Clostridium tetani E88]
gi|46576800|sp|Q899I4|PTH_CLOTE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|28202396|gb|AAO34842.1| peptidyl-tRNA hydrolase [Clostridium tetani E88]
Length = 188
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 112/174 (64%), Gaps = 8/174 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG EY + RHNIGF +D+I + P +++F +G++ + IL+K
Sbjct: 1 MFLLVGLGNPGKEYEKTRHNIGFEAVDKISYEYNIPIKRERFKGVFGDGRISNEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+SL E++ +Y +P + N +VI+DD+DL+ G LR++T G GHNG+KSI
Sbjct: 61 PTTYMNLSGESLREIIEYYNIP-ITNVIVIYDDVDLEVGRLRIRTKGSAGGHNGIKSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
+++ RLRIG+G+P ++ HVLG F+ + I+ + + +P LA
Sbjct: 120 NLNSEDFIRLRIGVGKP--QRDMVSHVLGKFAKEDE----KNIEEVLKIIPELA 167
>gi|187935710|ref|YP_001884405.1| peptidyl-tRNA hydrolase [Clostridium botulinum B str. Eklund 17B]
gi|238691600|sp|B2TI10|PTH_CLOBB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|187723863|gb|ACD25084.1| aminoacyl-tRNA hydrolase [Clostridium botulinum B str. Eklund 17B]
Length = 191
Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 111/183 (60%), Gaps = 4/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHNIGF ID I + + ++KF EG + + IL+K
Sbjct: 1 MFLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFRGVYGEGFIANNKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG S+ EV NFYK+ N EN +VI+DD+ LD G LR++ G GHNG+KSI
Sbjct: 61 PTTYMNLSGDSVREVANFYKISN-ENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+++G+G+P ++ +VLG FS E+ L I+ S+ + K++ S
Sbjct: 120 NLSTDVFPRIKVGVGQP--NIDLVNYVLGKFSKEEKEVLKESIEVATNSVEEIIKQDVNS 177
Query: 180 FLN 182
+N
Sbjct: 178 AMN 180
>gi|182420017|ref|ZP_02951251.1| peptidyl-tRNA hydrolase [Clostridium butyricum 5521]
gi|237669562|ref|ZP_04529542.1| aminoacyl-tRNA hydrolase [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182376054|gb|EDT73641.1| peptidyl-tRNA hydrolase [Clostridium butyricum 5521]
gi|237655006|gb|EEP52566.1| aminoacyl-tRNA hydrolase [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 191
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 106/164 (64%), Gaps = 4/164 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y + RHNIGF +D I + ++KF EG ++G + IL+K
Sbjct: 1 MFLIVGLGNPGSQYEDTRHNIGFKVVDNIAKEYNIEINRQKFKGVCGEGFINGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ EV++FYKL N ++ LVI+DD+ LD G LR++ G GHNG+KSI
Sbjct: 61 PTTYMNLSGESIREVVDFYKLSN-DDVLVIYDDISLDVGRLRIREKGSAGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G + + R+++G+G+P ++ +VLG F+ E L ID
Sbjct: 120 HLGTDIFPRIKVGVGQP--NVDLVNYVLGKFTKEEMEVLNESID 161
>gi|260887179|ref|ZP_05898442.1| aminoacyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
gi|330839054|ref|YP_004413634.1| peptidyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
gi|260863241|gb|EEX77741.1| aminoacyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
gi|329746818|gb|AEC00175.1| peptidyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
Length = 218
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 111/173 (64%), Gaps = 9/173 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG EY +HN+GFM +D + AW++KF+A +EG++ + +L+K
Sbjct: 1 MKIIAGLGNPGAEYARTKHNVGFMLVDALAERLGVDAWREKFNALTAEGRIGAQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ ++++YKL E+ +V HDD+D+ GT+RL+ G GHNG+KS+
Sbjct: 61 PLTYMNESGRAVGPLLDWYKLAP-EDLIVAHDDMDIAAGTIRLRRKGSAGGHNGIKSLLA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER-------YFLLPIIDNI 165
G +++ R+RIGIGRP +++HVL F + + +LLP ++ I
Sbjct: 120 HIGSEDFSRVRIGIGRPLPGWTVVKHVLAPFPADDAPKIQEAISYLLPAVECI 172
>gi|149177253|ref|ZP_01855859.1| peptidyl-tRNA hydrolase [Planctomyces maris DSM 8797]
gi|148843967|gb|EDL58324.1| peptidyl-tRNA hydrolase [Planctomyces maris DSM 8797]
Length = 189
Score = 140 bits (354), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 104/171 (60%), Gaps = 3/171 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHN+GF + ++ +H P + +F AE++E G + +L+
Sbjct: 1 MKVVVGLGNPGKKYERTRHNVGFEVLSQLAEWHGAPGSRSQFEAEVTEISCGGDKVLLVA 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ V F+KLP + +V+ DD++L G LRL+ G G GL+ I +
Sbjct: 61 PQTFMNLSGRSVAAVAKFFKLP-ATDVMVVCDDMNLPVGRLRLRGSGSAGGQKGLQDIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPI-IDNIARSL 169
K G ++ RLR+G+GRPP +VLG F + + L+ +DN AR +
Sbjct: 120 KLGTQDVPRLRVGVGRPPAGFSAADYVLGRFQGKQEFELIATAVDNAARGI 170
>gi|322515788|ref|ZP_08068733.1| aminoacyl-tRNA hydrolase [Streptococcus vestibularis ATCC 49124]
gi|322125750|gb|EFX97068.1| aminoacyl-tRNA hydrolase [Streptococcus vestibularis ATCC 49124]
Length = 189
Score = 140 bits (354), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 109/177 (61%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y E RHN+GFM ID + + ++ F AE++ L+G + +KP
Sbjct: 4 LVVGLGNPGSKYHETRHNVGFMAIDLMAKELGLTFSEERTFKAEVASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ ++ +Y +P +E+++VI+DDLD++ G LR + G GHNG+KSI +
Sbjct: 64 TTFMNLSGLAVRALLAYYNIP-MEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAE 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R++IGIGRP ++ HVLG FS + +L +D + +L K D
Sbjct: 123 TGTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYSTILLTLDKVEAALNHYLKTND 179
>gi|218290673|ref|ZP_03494764.1| Aminoacyl-tRNA hydrolase [Alicyclobacillus acidocaldarius LAA1]
gi|218239338|gb|EED06536.1| Aminoacyl-tRNA hydrolase [Alicyclobacillus acidocaldarius LAA1]
Length = 191
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 98/155 (63%), Gaps = 1/155 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GFM ID + + FHA + + + G + +L+K
Sbjct: 1 MKVIVGLGNPGREYERTRHNAGFMAIDILAEKLAARVDQADFHALVGDARYAGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN+SG S+ E++ +Y++ E+ +V++DD+D G +RLK G GHNG+KSI E
Sbjct: 61 PHTYMNVSGLSVGEIVRYYRIDPAEDLMVLYDDMDFPPGVVRLKVQGSAGGHNGIKSIIE 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + + R+RIGIGRPP A I+ +VLG FS E
Sbjct: 121 SLGTEKFGRVRIGIGRPPKGAPIVPYVLGAFSREE 155
>gi|72160821|ref|YP_288478.1| peptidyl-tRNA hydrolase [Thermobifida fusca YX]
gi|119391031|sp|Q47SW2|PTH_THEFY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71914553|gb|AAZ54455.1| peptidyl-tRNA hydrolase [Thermobifida fusca YX]
Length = 213
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 103/159 (64%), Gaps = 4/159 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++V GLGNPG +Y NRHN+GFM +D + + W+ K HA++ E ++ +L K
Sbjct: 35 WLVVGLGNPGPKYAGNRHNVGFMVVDELAA-QRGERWRLHKAHAQVVETRVGDAPVVLAK 93
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P ++MNLSG + ++ FYK+P ++ +V+HD+LD+ F L+LK GGG AGHNGL+SI+
Sbjct: 94 PASYMNLSGGPVAKLSAFYKVP-VDRIIVVHDELDIPFARLKLKRGGGSAGHNGLRSITA 152
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G +Y R+R+GIGRPP VL +FS+ ER L
Sbjct: 153 SLGSPDYVRVRVGIGRPPGRMDAASFVLQDFSTAERKEL 191
>gi|288921323|ref|ZP_06415605.1| peptidyl-tRNA hydrolase [Frankia sp. EUN1f]
gi|288347297|gb|EFC81592.1| peptidyl-tRNA hydrolase [Frankia sp. EUN1f]
Length = 195
Score = 140 bits (353), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 110/176 (62%), Gaps = 2/176 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG Y NRHN+GFM +D + + A++ + +L G +L +P
Sbjct: 10 WLVVGLGNPGPAYAGNRHNVGFMVVDLLAERTGARLRSHRSRADVDQVRLAGRPAVLARP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+TFMN+SG + FYK+ ++ + +V+HD+LD+ FG +RLK GGGD GHNGL+SI+
Sbjct: 70 RTFMNVSGPPAAALRAFYKV-DVAHVIVVHDELDIPFGAIRLKRGGGDNGHNGLRSITSS 128
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G ++Y R+R+GIGRPP VL +FS+ ER L ++D+ A ++ L + E
Sbjct: 129 LGSRDYLRVRVGIGRPPGRMDPADFVLRDFSTVERKELPLLVDSAADAVESLLQEE 184
>gi|156741710|ref|YP_001431839.1| peptidyl-tRNA hydrolase [Roseiflexus castenholzii DSM 13941]
gi|189038162|sp|A7NK01|PTH_ROSCS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|156233038|gb|ABU57821.1| Aminoacyl-tRNA hydrolase [Roseiflexus castenholzii DSM 13941]
Length = 214
Score = 140 bits (353), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG Y RHNIGF + + H K+ AEI+EG++ G R L
Sbjct: 1 MWLIVGLGNPGETYARTRHNIGFRVVTELAQRHHLRFTHKRAKAEIAEGEIAGQRVALAL 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQ+++ + +YK+ LV++DD+DL FG LRL+ G HNG++SI
Sbjct: 61 PQTYMNLSGQAVVGLRQWYKIDPATELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSIVA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLP-IIDNIARSLPLLAKREDV 178
G + RLRIGI RPP ++ +VL F +PE+ LP + A +L L+ + V
Sbjct: 121 LLGSQVFPRLRIGIDRPPVAWNLADYVLARF-TPEQEAQLPEVTRRAADALELVLREGIV 179
Query: 179 SFLNHI 184
+N I
Sbjct: 180 VAMNRI 185
>gi|258510198|ref|YP_003183632.1| peptidyl-tRNA hydrolase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257476924|gb|ACV57243.1| peptidyl-tRNA hydrolase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 191
Score = 140 bits (353), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 98/155 (63%), Gaps = 1/155 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GFM ID + + FHA + + + G + +L+K
Sbjct: 1 MKVIVGLGNPGREYERTRHNAGFMAIDILAEKLAARVDQADFHALVGDARYAGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN+SG S+ E++ +Y++ E+ +V++DD+D G +RLK G GHNG+KSI E
Sbjct: 61 PHTYMNVSGLSVGEIVRYYRIDPAEDLMVLYDDMDFPPGVVRLKAQGSAGGHNGIKSIIE 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + + R+RIGIGRPP A I+ +VLG FS E
Sbjct: 121 SLGTEKFGRVRIGIGRPPKGAPIVPYVLGAFSREE 155
>gi|157690835|ref|YP_001485297.1| peptidyl-tRNA hydrolase [Bacillus pumilus SAFR-032]
gi|167011990|sp|A8F920|PTH_BACP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157679593|gb|ABV60737.1| stage V sporulation aminoacyl-tRNA hydrolase [Bacillus pumilus
SAFR-032]
Length = 188
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 99/156 (63%), Gaps = 2/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M GLGNPG EY + RHN+GFM ID + P + KFH + G + G + +L+K
Sbjct: 1 MIAFVGLGNPGKEYEKTRHNVGFMTIDELSKKWDIPLNQSKFHGQFGTGFVSGQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M++Y +P LE+ VI+DDLDL G +RL+T G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECVRPLMDYYDIP-LEHLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQ 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + R RIGIGRP + ++ +VLG FS E+
Sbjct: 120 HLGSPEFDRFRIGIGRPQNGMKVVDYVLGRFSEEEQ 155
>gi|323706236|ref|ZP_08117803.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum LX-11]
gi|323534400|gb|EGB24184.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 190
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 107/170 (62%), Gaps = 4/170 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+IV GLGNPG EY + RHN+GF ID + K KF + I EG G + +L K
Sbjct: 1 MYIVVGLGNPGKEYEKTRHNVGFEVIDSLSKKLDIAVNKIKFKSLIGEGIYKGEKIVLQK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ ++++FYKLP L N +V++DD DLD G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNSSGEAVYDIVDFYKLP-LSNLIVVYDDKDLDVGKIRVRKKGSAGGHNGMKSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+++ R+R+GIG+P +I+HVLG F + + IDN A ++
Sbjct: 120 ILNSEDFPRVRLGIGKP--KGDMIQHVLGKFEGRDMDIVANSIDNAANAV 167
>gi|323691737|ref|ZP_08105997.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14673]
gi|323504215|gb|EGB20017.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14673]
Length = 202
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 111/174 (63%), Gaps = 3/174 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG EY +RHN+GFM +D + + +K A I +G ++G + IL+K
Sbjct: 1 MYIIAGLGNPGKEYAGSRHNVGFMTLDELADRYNIDVREKAHKALIGKGMIEGNKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ VM++YK E ++VI+DD+ L+ G +R++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESIRSVMDYYKTEPSE-FIVIYDDISLEPGQIRIRKKGSAGGHNGIKNIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII-DNIARSLPLL 172
G + + R+RIG+G P + +VLG+FS E+ + D +A ++ ++
Sbjct: 120 HLGTQEFPRIRIGVGEKPARMDLADYVLGHFSKEEKERMEQAFKDGVAAAVAMM 173
>gi|150014977|ref|YP_001307231.1| peptidyl-tRNA hydrolase [Clostridium beijerinckii NCIMB 8052]
gi|189038283|sp|A6LPJ5|PTH_CLOB8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|149901442|gb|ABR32275.1| Aminoacyl-tRNA hydrolase [Clostridium beijerinckii NCIMB 8052]
Length = 191
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 111/184 (60%), Gaps = 4/184 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG+EY RHNIGF ID I + ++KF EG ++G + +L+K
Sbjct: 1 MFLIVGLGNPGNEYENTRHNIGFKVIDNIAKEYNIEINRQKFKGMYGEGFINGKKVMLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ EV++FY L N E LVI+DD+ L+ G LR++ G GHNG+KSI
Sbjct: 61 PTTYMNLSGESVREVVDFYNLNNDE-ILVIYDDISLEVGKLRIREKGSAGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ R+++G+G+P +++HVLG F+ E L I+ ++ + K + +
Sbjct: 120 HLNSEIFSRIKVGVGQP--NGDLVKHVLGKFTKEETAILSESIEASTKAAAEIIKNDVKT 177
Query: 180 FLNH 183
+N
Sbjct: 178 AMNQ 181
>gi|148655155|ref|YP_001275360.1| peptidyl-tRNA hydrolase [Roseiflexus sp. RS-1]
gi|166229447|sp|A5US07|PTH_ROSS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148567265|gb|ABQ89410.1| peptidyl-tRNA hydrolase [Roseiflexus sp. RS-1]
Length = 217
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 106/186 (56%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG Y RHNIGF + + H K+ HA I+EG + G R L
Sbjct: 1 MWLIVGLGNPGDTYARTRHNIGFRVVSELAQRHRLEFTHKRAHARIAEGIIAGQRVALAL 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQ+++ + +YK+ LV++DD+DL FG LRL+ G HNG++SI
Sbjct: 61 PQTYMNLSGQAVVGLRQWYKIDPATELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSIIT 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLP-IIDNIARSLPLLAKREDV 178
G + RLRIGI RPP + +VLG F +PE+ LP I+ A +L + +
Sbjct: 121 LLGSQVFPRLRIGIDRPPPAWDLADYVLGRF-TPEQEAQLPDIMQKAADALETVVREGMA 179
Query: 179 SFLNHI 184
+N I
Sbjct: 180 VAMNRI 185
>gi|315644368|ref|ZP_07897508.1| peptidyl-tRNA hydrolase [Paenibacillus vortex V453]
gi|315280245|gb|EFU43537.1| peptidyl-tRNA hydrolase [Paenibacillus vortex V453]
Length = 187
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 107/170 (62%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y + RHN+GFM +D + H + K + I+EG + G +T+LIK
Sbjct: 1 MKWIVGLGNPGPAYEKTRHNVGFMALDALAERHGMKFNQNKCKSVIAEGMIGGSKTVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ M++YK+ NLE+ +V++DDLD G +RL+ G GHNG+KSI +
Sbjct: 61 PMTFMNLSGEAVRAYMDYYKV-NLEDMIVVYDDLDTVVGKIRLRYQGSAGGHNGIKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +++ R+R+GI RP I+ +VLG F ER L +++ +L
Sbjct: 120 HTGTQSFNRVRMGISRPEPGYAIVDYVLGTFPKKEREQLQSMVEETCDAL 169
>gi|257470432|ref|ZP_05634523.1| peptidyl-tRNA hydrolase [Fusobacterium ulcerans ATCC 49185]
gi|317064640|ref|ZP_07929125.1| peptidyl-tRNA hydrolase [Fusobacterium ulcerans ATCC 49185]
gi|313690316|gb|EFS27151.1| peptidyl-tRNA hydrolase [Fusobacterium ulcerans ATCC 49185]
Length = 186
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 100/166 (60%), Gaps = 2/166 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHNIGF I+++ K KF +SE +DG + + +K
Sbjct: 1 MKLIVGLGNPGDKYAKTRHNIGFEVINKLQKDLNIIGEKDKFQGLLSEKNIDGEKVLFLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG S+ V+NFYK+ + +VI+DD+DL G LR+K G GHNG+KSI
Sbjct: 61 PQTFMNLSGNSIAAVINFYKIDAKNDMIVIYDDMDLPVGKLRVKEKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
G + R++ GIG+ D I VLG F E+ + +I+N +
Sbjct: 121 HLGDEFLRIKCGIGKSKDDT--IDFVLGQFDKSEQETVDKMIENAS 164
>gi|322373974|ref|ZP_08048508.1| aminoacyl-tRNA hydrolase [Streptococcus sp. C150]
gi|321276940|gb|EFX54011.1| aminoacyl-tRNA hydrolase [Streptococcus sp. C150]
Length = 189
Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y E RHN+GFM ID I + +K F AE++ L+G + +KP
Sbjct: 4 LVVGLGNPGSKYHETRHNVGFMAIDLIAKGLGLTFSEEKTFKAEVASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ ++ +Y +P +EN++VI+DDLD++ G +R + G GHNG+KSI +
Sbjct: 64 TTFMNLSGLAVRALLAYYNIP-IENFIVIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAE 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R++IGIGRP ++ HVLG F+ + + +D + +L K D
Sbjct: 123 TGTQEFDRIKIGIGRPQKGMTVVNHVLGRFNEDDYATIQLTLDKVEAALNHYLKTND 179
>gi|323485662|ref|ZP_08091000.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14163]
gi|323401012|gb|EGA93372.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14163]
Length = 202
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 103/156 (66%), Gaps = 2/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG EY +RHN+GFM +D + + +K A I +G ++G + IL+K
Sbjct: 1 MYIIAGLGNPGKEYAGSRHNVGFMTLDELADRYNIDVREKAHKALIGKGMIEGNKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ VM++YK E ++VI+DD+ L+ G +R++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESIRSVMDYYKTEPSE-FIVIYDDISLEPGQIRIRKKGSAGGHNGIKNIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + + R+RIG+G P + +VLG+FS E+
Sbjct: 120 HLGTQEFPRIRIGVGEKPARMDLADYVLGHFSKEEK 155
>gi|313635143|gb|EFS01469.1| peptidyl-tRNA hydrolase [Listeria seeligeri FSL N1-067]
gi|313639811|gb|EFS04541.1| peptidyl-tRNA hydrolase [Listeria seeligeri FSL S4-171]
Length = 184
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 113/183 (61%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ +SE ++G + +L+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMVSEININGEKMLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ L+++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVLIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ R P +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSR-PSHGEVINYVLGDFPKAEQPDIIEAIQKSADAIEDFARTPFIE 178
Query: 180 FLN 182
+N
Sbjct: 179 IMN 181
>gi|291550021|emb|CBL26283.1| peptidyl-tRNA hydrolase [Ruminococcus torques L2-14]
Length = 192
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 111/184 (60%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNP EY RHN+GF IDR+ + +K A I +G + G + IL+K
Sbjct: 1 MYIIAGLGNPTKEYEGTRHNVGFDVIDRLSERYNIDVTMEKHRALIGKGMIAGQKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
PQT+MNLSG+S+ V+++YK+ + +VI+DD+ L G LR++ G GHNG+K+ I+
Sbjct: 61 PQTYMNLSGESIRSVIDYYKVDPEKELIVIYDDISLGVGQLRIRAKGSAGGHNGIKNIIA 120
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+ + R+++G+G P + +VLG+FS E+ + DN +++ L+ +
Sbjct: 121 HLGGQVFPRIKVGVGEKPPKYDLADYVLGHFSKAEQELMSEGYDNAVKAVELIVSDQISE 180
Query: 180 FLNH 183
+N
Sbjct: 181 AMNE 184
>gi|15896464|ref|NP_349813.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum ATCC 824]
gi|21263854|sp|Q97E97|PTH_CLOAB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|15026289|gb|AAK81153.1|AE007817_7 Stage V sporulation protein C, peptidyl-tRNA hydrolase [Clostridium
acetobutylicum ATCC 824]
gi|325510622|gb|ADZ22258.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum EA 2018]
Length = 187
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 111/174 (63%), Gaps = 4/174 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHN+GF I+ I + H KK F +G +DG + IL+K
Sbjct: 1 MFLIVGLGNPGLKYEHTRHNMGFDAIENIAAKHNISIDKKGFKGLYGKGIIDGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS- 119
P T+MNLSG+S++E N+YK+ N EN +VI+DD+ LD G +R++T G GHNG+K+I
Sbjct: 61 PYTYMNLSGESVVEAANYYKI-NKENIVVIYDDISLDVGKIRIRTKGSAGGHNGIKNIVL 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
+ + R+++G+G P T +++ +VLG FS ER + +++ + ++ +
Sbjct: 120 HLSSEEFPRVKVGVGEP--TENLVNYVLGKFSQDERKKIEEVLNIVTEAVECMV 171
>gi|327467733|gb|EGF13227.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK330]
Length = 189
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 109/170 (64%), Gaps = 3/170 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM +D+I K F A+I+ L+G + +KP
Sbjct: 4 LIVGLGNPGEKYIETKHNVGFMLVDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G + +KR++IGIGRP + ++ HVLG F + +L +D + +++
Sbjct: 123 IGIQEFKRIKIGIGRPKEGMTVVHHVLGKFDKDDYIMILNTLDKVDKAVK 172
>gi|319940212|ref|ZP_08014565.1| peptidyl-tRNA hydrolase [Streptococcus anginosus 1_2_62CV]
gi|319810683|gb|EFW07013.1| peptidyl-tRNA hydrolase [Streptococcus anginosus 1_2_62CV]
Length = 189
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG +Y E RHN+GFM +D++ S F K F AEI+ +G + +
Sbjct: 4 MIVGLGNPGEKYFETRHNVGFMLVDKMCKEKSLKF--TTDKIFQAEIASTFFNGEKVYFV 61
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ ++++Y L ++E+ +VI+DDLD++ G +RL+ G GHNG+KSI
Sbjct: 62 KPTTFMNESGKAVHALLSYYGL-DIEDLVVIYDDLDMEVGKIRLRAKGSAGGHNGIKSII 120
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ G + +KR++IGIGRP + II HVLG FS + +L +D I ++
Sbjct: 121 KHIGTQEFKRIKIGIGRPENNITIIHHVLGKFSKGDHAIILNTLDKIDSAV 171
>gi|271969794|ref|YP_003343990.1| aminoacyl-tRNA hydrolase [Streptosporangium roseum DSM 43021]
gi|270512969|gb|ACZ91247.1| Aminoacyl-tRNA hydrolase [Streptosporangium roseum DSM 43021]
Length = 201
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 103/166 (62%), Gaps = 2/166 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG EY NRHN GFM +D + + + AE+ EG+L G +L KP
Sbjct: 7 WLVVGLGNPGPEYAGNRHNAGFMVLDELAARAGGRFKVHRSRAEVLEGRLAGAPAVLAKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+FMNLSG + + +FYK+ + + +HD+LD+ +G LR K GGGD GHNGLKSI++
Sbjct: 67 LSFMNLSGGPVKALADFYKV-DPARVIAVHDELDIPYGALRAKLGGGDNGHNGLKSITKS 125
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
K+Y R+R GIGRPP +VL +F++ ER L ++D A
Sbjct: 126 LATKDYLRVRFGIGRPPGRMDAAAYVLRDFATAERKDLPFLVDRAA 171
>gi|222824357|ref|YP_002575931.1| peptidyl-tRNA hydrolase [Campylobacter lari RM2100]
gi|254783858|sp|B9KDP1|PTH_CAMLR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|222539578|gb|ACM64679.1| peptidyl-tRNA hydrolase [Campylobacter lari RM2100]
Length = 179
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 102/175 (58%), Gaps = 11/175 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGN G +Y + RHN+GFM ID + KF E+ + L +
Sbjct: 1 MTLVVGLGNIGEQYAQTRHNVGFMLIDLLLKDLEVAKLSNTKFKGELFKSSL----AFFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S+ V +FYK + +VIHDD+DL+ GTL+ K GG GHNGLKSI
Sbjct: 57 KPSTYMNLSGESVKAVSDFYKCDRI---IVIHDDIDLNLGTLKFKIGGSSGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
CG Y+R+RIG+G+ D +I HVLG F E+ L +++ ++L L K
Sbjct: 114 NLCGNAYERVRIGVGKDQD---VISHVLGKFKQEEQESLNKVLEQAKKALFELLK 165
>gi|312194511|ref|YP_004014572.1| peptidyl-tRNA hydrolase [Frankia sp. EuI1c]
gi|311225847|gb|ADP78702.1| peptidyl-tRNA hydrolase [Frankia sp. EuI1c]
Length = 195
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 107/172 (62%), Gaps = 2/172 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG EY RHN GF+ +D + H K A+ ++ +L G+ +L +P
Sbjct: 9 WLVVGLGNPGPEYASTRHNAGFLVVDLLAERHGARLRSHKARADAAQLRLAGVSAVLARP 68
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+T+MN+SG + + +F+K+ + +V+HD+LD+ FG +RLK GGGD GHNGL+SI+
Sbjct: 69 RTYMNVSGPPVAALRSFFKV-DPARVIVVHDELDIPFGAVRLKRGGGDNGHNGLRSITSS 127
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G ++Y R+R GIGRPP VL +F+ PER L ++D A ++ L
Sbjct: 128 LGTRDYLRVRFGIGRPPGRMDPADFVLRDFAVPERKELPFLVDRAADAVEAL 179
>gi|325689359|gb|EGD31365.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK115]
Length = 189
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 109/169 (64%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID+I K F A+I+ L+G + +KP
Sbjct: 4 LIVGLGNPGEKYIETKHNVGFMLIDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR++IGIGRP + ++ HVLG F + + +L +D + ++
Sbjct: 123 IGSQEFKRIKIGIGRPKEGMTVVHHVLGKFDTDDYIMILNTLDKVDNAV 171
>gi|86153854|ref|ZP_01072057.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|121613036|ref|YP_001000022.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 81-176]
gi|148927013|ref|ZP_01810689.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni CG8486]
gi|167004980|ref|ZP_02270738.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 81-176]
gi|205356038|ref|ZP_03222806.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni CG8421]
gi|166199322|sp|A1VY31|PTH_CAMJJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|85842815|gb|EAQ60027.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87250186|gb|EAQ73144.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 81-176]
gi|145844421|gb|EDK21530.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni CG8486]
gi|205346162|gb|EDZ32797.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni CG8421]
gi|307747249|gb|ADN90519.1| Peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni M1]
Length = 181
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 113/189 (59%), Gaps = 10/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGN G EY RHN+GFM ID + +F KF E+ + G +L+
Sbjct: 1 MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFKGELFK---IGSSLLLL 57
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG S+ V +FYK E +VIHDD+D++ G LR K GG GHNGLKSI
Sbjct: 58 KPSTYMNNSGLSVKAVNDFYKC---ERMIVIHDDIDINLGALRFKKGGSSGGHNGLKSID 114
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG +Y+R+RIG+G+ + +I HVLG F S E L ++++ ++L L + +D+S
Sbjct: 115 TLCGNDYERVRIGVGKGEN---VISHVLGKFKSEEEITLSKVLEHTKKALLELIENDDLS 171
Query: 180 FLNHIVSVR 188
++ S++
Sbjct: 172 AISSKYSLK 180
>gi|319956048|ref|YP_004167311.1| peptidyl-tRNA hydrolase [Nitratifractor salsuginis DSM 16511]
gi|319418452|gb|ADV45562.1| peptidyl-tRNA hydrolase [Nitratifractor salsuginis DSM 16511]
Length = 190
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 109/181 (60%), Gaps = 11/181 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEI-SEGQLDGLRTIL 58
M + GLGNPG Y + RHNIGF IDR + KK F E+ +G L
Sbjct: 1 MTLYVGLGNPGPAYEKTRHNIGFRVIDRLVAETGARNISKKAFEGELYRQGNL-----FF 55
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG+S+ VMNF+K+ +LE+ +V+HDD+DL GT+R K GG GHNGLKSI
Sbjct: 56 LKPLTYMNLSGRSIKAVMNFFKI-SLEDLVVVHDDIDLPLGTIRYKVGGSSGGHNGLKSI 114
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID---NIARSLPLLAKR 175
E GK Y R+R+G+G+P + ++ +VL F+ E + ++D +A +P L+
Sbjct: 115 DEYVGKEYLRMRMGVGKPTRKSEVVSYVLAPFTPEEEAEVERLVDYAAEVALKIPSLSLD 174
Query: 176 E 176
E
Sbjct: 175 E 175
>gi|220930454|ref|YP_002507363.1| peptidyl-tRNA hydrolase [Clostridium cellulolyticum H10]
gi|220000782|gb|ACL77383.1| peptidyl-tRNA hydrolase [Clostridium cellulolyticum H10]
Length = 189
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 103/156 (66%), Gaps = 2/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+++ GLGNPG ++ RHN+GF ID I + K F A EG ++G+RTIL+K
Sbjct: 4 VYLFVGLGNPGTKFENTRHNVGFDTIDYISVKYNIKLSKIGFKALYGEGSIEGIRTILVK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E++++YKLP LE +VI+DD+DL+ G +R++ G HNG+KSI
Sbjct: 64 PQTFMNLSGESVREIVDWYKLP-LERLIVIYDDIDLEPGKMRVRPKGSSGTHNGMKSIIY 122
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + + R+RIGIGR P+ + +VL FS +R
Sbjct: 123 QLQDDSFPRVRIGIGRAPEKWDLADYVLSKFSKEDR 158
>gi|157828785|ref|YP_001495027.1| peptidyl-tRNA hydrolase [Rickettsia rickettsii str. 'Sheila Smith']
gi|165933513|ref|YP_001650302.1| peptidyl-tRNA hydrolase [Rickettsia rickettsii str. Iowa]
gi|166229446|sp|A8GSZ4|PTH_RICRS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038161|sp|B0BUI6|PTH_RICRO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157801266|gb|ABV76519.1| peptidyl-tRNA hydrolase [Rickettsia rickettsii str. 'Sheila Smith']
gi|165908600|gb|ABY72896.1| peptidyl-tRNA hydrolase [Rickettsia rickettsii str. Iowa]
Length = 185
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 120/186 (64%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHN+GF+ I++I + ++ + KKKF+ EI+E G + I I
Sbjct: 1 MLLVIGLGNPGKEYQYTRHNVGFIAIEKIANQYNSSFSTKKKFNCEIAETISYGQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + +++ VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNIYPAKSF-VIHDDIDLETGRVKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+RIG+GRP + + +VL +FS PE ++ ID I + L+ + +
Sbjct: 120 GVIGNNYNRIRIGVGRPQNNQDLADYVLNHFSKPEYKTVMQAIDRITSNFGLILENKLEE 179
Query: 180 FLNHIV 185
F N +
Sbjct: 180 FKNKMA 185
>gi|154148461|ref|YP_001406854.1| peptidyl-tRNA hydrolase [Campylobacter hominis ATCC BAA-381]
gi|166199320|sp|A7I2W3|PTH_CAMHC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|153804470|gb|ABS51477.1| peptidyl-tRNA hydrolase [Campylobacter hominis ATCC BAA-381]
Length = 220
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 109/177 (61%), Gaps = 11/177 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEI-SEGQLDGLRTILI 59
M ++ GLGNPG+EY +HNIGFM ID + S F KF E+ +G++ +L+
Sbjct: 1 MILIVGLGNPGNEYKNTKHNIGFMLIDELLSSDFSSLKSSKFQGELFKKGEI-----LLL 55
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQTFMNLSG S+ V +FYK P E +VIHDDLDL+FG LR K GG GHNG+KSI
Sbjct: 56 KPQTFMNLSGNSVKAVNDFYK-P--ERIIVIHDDLDLNFGALRFKRGGSSGGHNGIKSID 112
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G +Y+R+RIGIGR A I VL F++ E L+ I+ +++ L K +
Sbjct: 113 NLIGNDYERVRIGIGRGQGNAANI--VLSKFNNDEDKKLVEILSTAKKAVEFLIKND 167
>gi|315301105|ref|ZP_07872399.1| peptidyl-tRNA hydrolase [Listeria ivanovii FSL F6-596]
gi|313630526|gb|EFR98365.1| peptidyl-tRNA hydrolase [Listeria ivanovii FSL F6-596]
Length = 184
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 113/183 (61%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ +SE ++G + +L+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKAKFNGMVSEINVNGEKMLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +++ L+I+DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-MKDVLIIYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ R P +I +VLG+F E+ ++ I A ++ AK +
Sbjct: 120 HVKTQEFNRIRVGVSR-PSHGEVINYVLGDFPKSEQADIIEAIQKSADAVEDFAKLPFIE 178
Query: 180 FLN 182
+N
Sbjct: 179 VMN 181
>gi|86149181|ref|ZP_01067413.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88597200|ref|ZP_01100435.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 84-25]
gi|157414609|ref|YP_001481865.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 81116]
gi|218561971|ref|YP_002343750.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|14195085|sp|Q9PII7|PTH_CAMJE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|172047038|sp|A8FKA1|PTH_CAMJ8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|85840539|gb|EAQ57796.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88190261|gb|EAQ94235.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 84-25]
gi|112359677|emb|CAL34463.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|157385573|gb|ABV51888.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 81116]
gi|284925584|gb|ADC27936.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni IA3902]
gi|315928387|gb|EFV07701.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315930529|gb|EFV09572.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 305]
gi|315931611|gb|EFV10577.1| Aminoacyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 327]
Length = 181
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 113/189 (59%), Gaps = 10/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGN G EY RHN+GFM ID + +F KF E+ + G +L+
Sbjct: 1 MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFKGELFK---IGSSLLLL 57
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG S+ V +FYK E +VIHDD+D++ G LR K GG GHNGLKSI
Sbjct: 58 KPSTYMNNSGLSVKAVNDFYKC---ERMIVIHDDIDINLGALRFKKGGSSGGHNGLKSID 114
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG +Y+R+RIG+G+ + +I HVLG F S E L ++++ ++L L + +D+S
Sbjct: 115 TLCGNDYERVRIGVGKGEN---VISHVLGKFKSEEEITLSKVLEHAKKALLELIENDDLS 171
Query: 180 FLNHIVSVR 188
++ S++
Sbjct: 172 AISSKYSLK 180
>gi|171855139|sp|A7ZCE9|PTH_CAMC1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|158604936|gb|EAT99009.3| peptidyl-tRNA hydrolase (PTH) [Campylobacter concisus 13826]
Length = 182
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 113/189 (59%), Gaps = 11/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHNIGFM ID + +F KF E+ + +G+ IL+K
Sbjct: 1 MTLIAGLGNPGPKYENTRHNIGFMLIDLLKDSNFKDVSSAKFQGEVF--KFNGI--ILLK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ V +FYK + +VIHDDLDL FG ++ K GG GHNG+KSI
Sbjct: 57 PTTFMNLSGQSVKAVRDFYKPDRI---IVIHDDLDLSFGAVKFKKGGSSGGHNGIKSIDN 113
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+R+GIG D + VLG FS E+ L I+ ++ L K D++
Sbjct: 114 LIGNDYERVRVGIGHEGDAKNF---VLGEFSDEEKKALDEILAYTKNAVCELLK-SDINE 169
Query: 181 LNHIVSVRK 189
++ +V+K
Sbjct: 170 ISQKFTVKK 178
>gi|311028984|ref|ZP_07707074.1| peptidyl-tRNA hydrolase [Bacillus sp. m3-13]
gi|311032272|ref|ZP_07710362.1| peptidyl-tRNA hydrolase [Bacillus sp. m3-13]
Length = 186
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 105/165 (63%), Gaps = 6/165 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y E RHNIGFM ID + P + KF +G ++G + +L+K
Sbjct: 1 MKVFVGLGNPGRQYEETRHNIGFMVIDELADKWNIPLTQSKFKGIFGQGTINGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +++FYKL ++E+ +VI+DDLDL G LRL+ G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECVRPLLDFYKL-DVEDLVVIYDDLDLPAGKLRLRQKGSAGGHNGIKSLIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
+N+ R+R+GI RP + I +VLG F + ER P ID+
Sbjct: 120 HLQTQNFNRIRMGIDRPKNGPSISDYVLGKFQTEER----PAIDD 160
>gi|319945977|ref|ZP_08020226.1| aminoacyl-tRNA hydrolase [Streptococcus australis ATCC 700641]
gi|319747785|gb|EFW00030.1| aminoacyl-tRNA hydrolase [Streptococcus australis ATCC 700641]
Length = 189
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 108/174 (62%), Gaps = 3/174 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM +D++ S + + K F A+++ +DG + L+KP
Sbjct: 4 LIVGLGNPGDKYVETKHNVGFMLVDQLAKSLNLTFSHDKIFQADVTSTFIDGEKVFLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L +E+ +VI+DDLD++ G +RL+T G GHNG+KSI
Sbjct: 64 TTFMNESGKAVHALLTYYGLE-VEDLVVIYDDLDMEVGKIRLRTKGSAGGHNGIKSIINH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G + + R++IGIGRP ++ HVLG F + +L ID +L K
Sbjct: 123 IGTQTFNRIKIGIGRPKQGMSVVHHVLGKFDQDDYATILLAIDKSEEALRFYLK 176
>gi|148381480|ref|YP_001256021.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 3502]
gi|153931979|ref|YP_001385855.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 19397]
gi|153936610|ref|YP_001389262.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. Hall]
gi|166199325|sp|A7FPJ7|PTH_CLOB1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199326|sp|A5I7R5|PTH_CLOBH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148290964|emb|CAL85100.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 3502]
gi|152928023|gb|ABS33523.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 19397]
gi|152932524|gb|ABS38023.1| aminoacyl-tRNA hydrolase [Clostridium botulinum A str. Hall]
Length = 189
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 109/169 (64%), Gaps = 4/169 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGN G EY + RHNIGF +D I + ++KF EG++ + IL+K
Sbjct: 1 MYLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NFYK+ EN +VI+DD+ +D G LR+++ G GHNG+K+I +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDK-ENIIVIYDDMSIDIGKLRVRSKGSAGGHNGIKNIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
+ + R+R+GIG+P + +++ +VLG FS ER + ++ A++
Sbjct: 120 HLNSDIFPRVRVGIGQPDE--NVVNYVLGKFSKDEREIIEKVLAMSAKA 166
>gi|86608210|ref|YP_476972.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|119391025|sp|Q2JNF7|PTH_SYNJB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86556752|gb|ABD01709.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 224
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHN GFM +DR+ P +K+F EG G + L+KP
Sbjct: 16 LVVGLGNPGPQYANTRHNCGFMVVDRLAQRWGIPLVLEKRFQGSYGEGFALGGKRRLLKP 75
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+T+MN SGQS+ V+++YKL +L + LV++DD+DL G LRL+ G GHNG+KSI +
Sbjct: 76 ETYMNRSGQSVRAVLDWYKL-DLASVLVVYDDMDLPLGRLRLRGSGSAGGHNGMKSIIQH 134
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G + + RLR+G+G+P + ++ HVLG F+ E+ L ++D
Sbjct: 135 LGSEAFPRLRLGVGKPKGSQDVVGHVLGGFAPAEQEVLERVLD 177
>gi|224368791|ref|YP_002602952.1| Pth [Desulfobacterium autotrophicum HRM2]
gi|223691507|gb|ACN14790.1| Pth [Desulfobacterium autotrophicum HRM2]
Length = 193
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+F+VAGLGNPG Y + RHNIGF+ + + H P K +F++ + G ++GL ++ +
Sbjct: 6 IFMVAGLGNPGRNYAQTRHNIGFLVAQSLVATHGLPPEKNRFNSSYTRGVINGLNVVVAR 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ +MN SG + ++ ++K+ N +V+HDDLDLDFG + + G GHNG++SI E
Sbjct: 66 PQAYMNRSGPPVQQLAAYFKI-QTRNIIVVHDDLDLDFGRMLIAVNRGHGGHNGIRSIIE 124
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G K + R+R+G+GRP + HVLG F+ E
Sbjct: 125 ALGTKEFNRVRVGVGRPQGDQEVTGHVLGRFAPSE 159
>gi|315222839|ref|ZP_07864724.1| peptidyl-tRNA hydrolase [Streptococcus anginosus F0211]
gi|315188075|gb|EFU21805.1| peptidyl-tRNA hydrolase [Streptococcus anginosus F0211]
Length = 189
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG +Y E RHN+GFM ID++ + F K F AEI+ G + +
Sbjct: 4 MIVGLGNPGEKYFETRHNVGFMLIDKMCKEQNLKF--TTDKIFQAEIASTFFYGEKVYFV 61
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ ++++Y L ++E+ +VI+DDLD++ G +RL+ G GHNG+KSI
Sbjct: 62 KPTTFMNESGKAVHALLSYYGL-DIEDLVVIYDDLDMEVGKIRLRAKGSAGGHNGIKSII 120
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ G + +KR++IGIGRP + II HVLG FS + +L I+D + ++
Sbjct: 121 KHIGTQEFKRIKIGIGRPENNITIIHHVLGKFSKGDYAIILNILDKVDSAV 171
>gi|18311467|ref|NP_563401.1| peptidyl-tRNA hydrolase [Clostridium perfringens str. 13]
gi|110798942|ref|YP_697173.1| peptidyl-tRNA hydrolase [Clostridium perfringens ATCC 13124]
gi|168205745|ref|ZP_02631750.1| peptidyl-tRNA hydrolase [Clostridium perfringens E str. JGS1987]
gi|168209723|ref|ZP_02635348.1| peptidyl-tRNA hydrolase [Clostridium perfringens B str. ATCC 3626]
gi|168213409|ref|ZP_02639034.1| peptidyl-tRNA hydrolase [Clostridium perfringens CPE str. F4969]
gi|168217602|ref|ZP_02643227.1| peptidyl-tRNA hydrolase [Clostridium perfringens NCTC 8239]
gi|169343257|ref|ZP_02864268.1| peptidyl-tRNA hydrolase [Clostridium perfringens C str. JGS1495]
gi|182624327|ref|ZP_02952112.1| peptidyl-tRNA hydrolase [Clostridium perfringens D str. JGS1721]
gi|21263844|sp|Q8XHJ8|PTH_CLOPE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390927|sp|Q0TMG7|PTH_CLOP1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|18146151|dbj|BAB82191.1| stage V sporulation protein C [Clostridium perfringens str. 13]
gi|110673589|gb|ABG82576.1| peptidyl-tRNA hydrolase [Clostridium perfringens ATCC 13124]
gi|169298555|gb|EDS80636.1| peptidyl-tRNA hydrolase [Clostridium perfringens C str. JGS1495]
gi|170662744|gb|EDT15427.1| peptidyl-tRNA hydrolase [Clostridium perfringens E str. JGS1987]
gi|170712152|gb|EDT24334.1| peptidyl-tRNA hydrolase [Clostridium perfringens B str. ATCC 3626]
gi|170715077|gb|EDT27259.1| peptidyl-tRNA hydrolase [Clostridium perfringens CPE str. F4969]
gi|177910545|gb|EDT72918.1| peptidyl-tRNA hydrolase [Clostridium perfringens D str. JGS1721]
gi|182380300|gb|EDT77779.1| peptidyl-tRNA hydrolase [Clostridium perfringens NCTC 8239]
Length = 188
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 116/183 (63%), Gaps = 4/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHNIGF ID + + + ++KF EG ++ + IL+K
Sbjct: 1 MILIVGLGNPGKQYEQTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ E+ NFYKL + E +V++DD+ LD G LR++ G GHNG+KSI +
Sbjct: 61 PLTYMNLSGESIRELANFYKLEDDE-IIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G+P D +++ HVLG FS +R + +I ++ ++ + K +
Sbjct: 120 NLGGDKFPRVKVGVGQPKD--NLVNHVLGKFSKEDREHIEKVIPVVSDAIVEIVKNDAKE 177
Query: 180 FLN 182
+N
Sbjct: 178 SMN 180
>gi|253681331|ref|ZP_04862129.1| aminoacyl-tRNA hydrolase [Clostridium botulinum D str. 1873]
gi|253562569|gb|EES92020.1| aminoacyl-tRNA hydrolase [Clostridium botulinum D str. 1873]
Length = 190
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 112/183 (61%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG EY RHN+GF ID + H +KKF +G + G + IL+K
Sbjct: 1 MFLIVGLGNPGKEYEHTRHNVGFDVIDLLAEKHNIELNRKKFKGMYGDGNIAGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ E+M+FYK+ N E+ +VI+DD+ L+ G +R++ G GHNG+K+I
Sbjct: 61 PLTYMNLSGESVREIMDFYKITN-EDIIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIA 119
Query: 121 KCGKNY-KRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+Y R+++G+G+P T +++ HVLG F + L + +++ ++ ++
Sbjct: 120 HLNNDYFSRVKVGVGQPVKT-NLVSHVLGKFEKEDECKLNKTFEAACKAVQIIIEKGTAE 178
Query: 180 FLN 182
+N
Sbjct: 179 AMN 181
>gi|71082804|ref|YP_265523.1| peptidyl-tRNA hydrolase [Candidatus Pelagibacter ubique HTCC1062]
gi|119390975|sp|Q4FPG9|PTH_PELUB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71061917|gb|AAZ20920.1| Peptidyl-tRNA hydrolase [Candidatus Pelagibacter ubique HTCC1062]
Length = 186
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 104/176 (59%), Gaps = 1/176 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP + NRHNIGF ID ++ K KF ++ G ++ + IK
Sbjct: 1 MLLFVGLGNPTPDSENNRHNIGFKLIDALNQKFGLSKQKPKFKGLLTTGNVEDKKVYAIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + E++ ++K+ + E+ +V HDDLDL+FG ++ K G AGHNG++SI +
Sbjct: 61 PLTFMNNSGICIRELIEYFKI-DAEDVIVFHDDLDLEFGKVKAKFAGSSAGHNGIESIDK 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
GK+Y R+RIGIGRP A + HVL +F E L I NI S+ +L ++
Sbjct: 120 FIGKDYSRVRIGIGRPKTKADVADHVLKDFDEDEMIQLEKITKNIIDSMAILIDKK 175
>gi|324991861|gb|EGC23784.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK405]
gi|324996249|gb|EGC28159.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK678]
gi|325698027|gb|EGD39908.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK160]
gi|327458485|gb|EGF04835.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK1]
gi|327471613|gb|EGF17056.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK408]
gi|327490343|gb|EGF22130.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK1058]
Length = 189
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 108/169 (63%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM +D+I K F A+I+ L+G + +KP
Sbjct: 4 LIVGLGNPGEKYIETKHNVGFMLVDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR++IGIGRP + ++ HVLG F + +L +D + ++
Sbjct: 123 IGSQEFKRIKIGIGRPKEGTTVVHHVLGKFDKDDYIMILNTLDKVDNAV 171
>gi|158522829|ref|YP_001530699.1| aminoacyl-tRNA hydrolase [Desulfococcus oleovorans Hxd3]
gi|158511655|gb|ABW68622.1| Aminoacyl-tRNA hydrolase [Desulfococcus oleovorans Hxd3]
Length = 193
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 107/188 (56%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG +Y RHNIGFM IDR+ F + K G ++G R + +KP
Sbjct: 7 YLLAGLGNPGSDYARTRHNIGFMVIDRLAERFSFAIDRTKGSCLYGTGGIEGQRVVAVKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q FMN SG L + + K+ + + LV+HDD+DL FG L++KT GG GHNG+KSI +
Sbjct: 67 QGFMNSSGPPLFRLAQYLKISS-KRMLVVHDDIDLAFGKLKIKTKGGHGGHNGIKSIIDT 125
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ R+RIGI P ++ HVLG FS+ E L +I ++ + K +
Sbjct: 126 FGTDDFVRVRIGIDHPGAREGVVGHVLGRFSAEELEHLDGLIQQAGETVTAILKEGATAA 185
Query: 181 LNHIVSVR 188
+N + R
Sbjct: 186 MNRLHGAR 193
>gi|89892925|ref|YP_516412.1| peptidyl-tRNA hydrolase [Desulfitobacterium hafniense Y51]
gi|89332373|dbj|BAE81968.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 196
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 111/178 (62%), Gaps = 9/178 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTI 57
M ++AGLGNPG +Y E RHN GF+ +D + F P KF ++E + G +
Sbjct: 12 MKLIAGLGNPGGQYAETRHNAGFLLLDCLAEELKLDFRP----KFQGLVAETMMGGEKVY 67
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KPQTFMNLSG+S+ E+ FYK+ ++ +V++DD+DL G LRL++ G GHNG+KS
Sbjct: 68 LLKPQTFMNLSGRSIRELAQFYKIAP-KDIMVVYDDMDLPIGRLRLRSSGSAGGHNGIKS 126
Query: 118 -ISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
I+E +++ RL++GIGRP R+VL +F+ E L I+D +++ L AK
Sbjct: 127 TIAELGTEDFWRLKVGIGRPTAGWDSARYVLASFTKEELPVLEEILDKGIKAVTLWAK 184
>gi|219666189|ref|YP_002456624.1| peptidyl-tRNA hydrolase [Desulfitobacterium hafniense DCB-2]
gi|119390936|sp|Q251S4|PTH_DESHY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783865|sp|B8FZA5|PTH_DESHD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219536449|gb|ACL18188.1| Aminoacyl-tRNA hydrolase [Desulfitobacterium hafniense DCB-2]
Length = 185
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 111/178 (62%), Gaps = 9/178 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTI 57
M ++AGLGNPG +Y E RHN GF+ +D + F P KF ++E + G +
Sbjct: 1 MKLIAGLGNPGGQYAETRHNAGFLLLDCLAEELKLDFRP----KFQGLVAETMMGGEKVY 56
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KPQTFMNLSG+S+ E+ FYK+ ++ +V++DD+DL G LRL++ G GHNG+KS
Sbjct: 57 LLKPQTFMNLSGRSIRELAQFYKIAP-KDIMVVYDDMDLPIGRLRLRSSGSAGGHNGIKS 115
Query: 118 -ISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
I+E +++ RL++GIGRP R+VL +F+ E L I+D +++ L AK
Sbjct: 116 TIAELGTEDFWRLKVGIGRPTAGWDSARYVLASFTKEELPVLEEILDKGIKAVTLWAK 173
>gi|238650661|ref|YP_002916513.1| peptidyl-tRNA hydrolase [Rickettsia peacockii str. Rustic]
gi|259535240|sp|C4K1L4|PTH_RICPU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238624759|gb|ACR47465.1| peptidyl-tRNA hydrolase [Rickettsia peacockii str. Rustic]
Length = 182
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 117/183 (63%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHN+GF+ I++I + ++ + KKKF+ EI+E D + I I
Sbjct: 1 MLLVIGLGNPGKEYQYTRHNVGFIAIEKIANQYNSSFSTKKKFNCEIAETISDRQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + + VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNIYPAK-IFVIHDDIDLETGRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+RIG+GRP + + +VL +FS PE ++ ID I + L+ + +
Sbjct: 120 GVIGNNYNRIRIGVGRPQNNQDVADYVLNHFSKPEYKTVMQAIDRITSNFGLILENKLEE 179
Query: 180 FLN 182
F N
Sbjct: 180 FKN 182
>gi|255023010|ref|ZP_05294996.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL J1-208]
Length = 186
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEINIGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ AK +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVIHYVLGDFPKAEQPEIIAAIQKSADAIEDFAKTPFIE 178
Query: 180 FLN 182
+N
Sbjct: 179 VMN 181
>gi|134297988|ref|YP_001111484.1| aminoacyl-tRNA hydrolase [Desulfotomaculum reducens MI-1]
gi|172044208|sp|A4J0Q6|PTH_DESRM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|134050688|gb|ABO48659.1| peptidyl-tRNA hydrolase [Desulfotomaculum reducens MI-1]
Length = 206
Score = 137 bits (346), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 101/170 (59%), Gaps = 4/170 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY + RHNIGFM IDR+ K + A+I + + + IL K
Sbjct: 1 MKLIVGLGNPGTEYAKTRHNIGFMVIDRLADESRVSTEKNQHKAQICQITIGSEKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQS++ +MN+YKL + + VI DD+DL G LR++ G G GLK+I E
Sbjct: 61 PQTYMNLSGQSVVALMNWYKL-SPDELFVITDDMDLPPGVLRIRKNGSAGGQRGLKNIIE 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R+R+GIGRP A + HVLG S E + P I ++
Sbjct: 120 LLGTQQFPRMRVGIGRPEHGA--VDHVLGKISEAEAELINPAIQTAVEAV 167
>gi|157825997|ref|YP_001493717.1| peptidyl-tRNA hydrolase [Rickettsia akari str. Hartford]
gi|166229443|sp|A8GP84|PTH_RICAH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157799955|gb|ABV75209.1| peptidyl-tRNA hydrolase [Rickettsia akari str. Hartford]
Length = 185
Score = 137 bits (346), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 116/186 (62%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHNIGF+ I++I + ++ + KK+F+ EI+E DG + I I
Sbjct: 1 MILVIGLGNPGKEYQYTRHNIGFIAIEKIANQYNSSFSTKKQFNCEIAETISDGQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + N VIHDD+DL+ ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNI-NPAKIFVIHDDIDLETCRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+R+G+GRP + + ++L NF E + ID I + L+ + +
Sbjct: 120 GVIGNNYNRIRVGVGRPKNNQDVADYLLNNFLQSEYEIAMQAIDRIVNNFDLILENKLEK 179
Query: 180 FLNHIV 185
F N IV
Sbjct: 180 FKNKIV 185
>gi|291298816|ref|YP_003510094.1| peptidyl-tRNA hydrolase [Stackebrandtia nassauensis DSM 44728]
gi|290568036|gb|ADD41001.1| peptidyl-tRNA hydrolase [Stackebrandtia nassauensis DSM 44728]
Length = 213
Score = 137 bits (346), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 108/173 (62%), Gaps = 7/173 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD--GLRTI 57
+++ GLGNPG +Y NRHN+GFM D + + K+ K AE+ +G+L G + I
Sbjct: 6 YLIVGLGNPGPKYAGNRHNVGFMVADLLAE-RVGGSMKRAAKVRAEVCQGRLSIGGPQVI 64
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KP T+MN+SGQ++ + F+K+P E +V+HD+LDL +G +RLK GGG+ GHNGLKS
Sbjct: 65 LVKPLTYMNVSGQAVAPLAVFFKVPA-ERIIVVHDELDLPYGVVRLKAGGGENGHNGLKS 123
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
S+ G K Y R R GIGRPP VL +FS E+ L +D A ++
Sbjct: 124 TSQALGDKGYVRARFGIGRPPGRIDPAAFVLRDFSPAEKKELPLFVDLTADAV 176
>gi|325695765|gb|EGD37664.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK150]
Length = 189
Score = 137 bits (346), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 108/169 (63%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM +D+I K F A+I+ L+G + +KP
Sbjct: 4 LIVGLGNPGEKYIETKHNVGFMLVDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR++IGIGRP + ++ HVLG F + +L +D + ++
Sbjct: 123 IGSQEFKRIKIGIGRPKEGMTVVHHVLGKFDKDDYIMILNTLDKVDNAV 171
>gi|328945179|gb|EGG39334.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK1087]
Length = 189
Score = 137 bits (346), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 109/169 (64%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM +D+I K F A+I+ L+G + +KP
Sbjct: 4 LIVGLGNPGEKYIETKHNVGFMLVDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR++IGIGRP + ++ HVLG F + + +L +D + ++
Sbjct: 123 IGSQEFKRIKIGIGRPKEGMTVVHHVLGKFDTDDYITILNTLDKVDNAV 171
>gi|324989583|gb|EGC21529.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK353]
Length = 189
Score = 137 bits (346), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 108/169 (63%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM +D+I K F A+I+ L+G + +KP
Sbjct: 4 LIVGLGNPGEKYIETKHNVGFMLVDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR++IGIGRP + ++ HVLG F + +L +D + ++
Sbjct: 123 IGSQEFKRIKIGIGRPKEGVTVVHHVLGKFDKDDYMTILNTLDKVDNAV 171
>gi|163794566|ref|ZP_02188537.1| peptidyl-tRNA hydrolase [alpha proteobacterium BAL199]
gi|159180290|gb|EDP64813.1| peptidyl-tRNA hydrolase [alpha proteobacterium BAL199]
Length = 215
Score = 137 bits (346), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 116/186 (62%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIGFM ID I + F W+ +F ++EG + G + + +K
Sbjct: 1 MLLFVGLGNPGPSYEGNRHNIGFMAIDEIARVYGFGPWRSRFQGLVAEGHIAGGKVLALK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E F+KL + V +D+LDL G +R+KTGGG GHNG++SI +
Sbjct: 61 PLTFMNESGRSVGEAARFFKL-EPKKVCVFYDELDLVPGKVRVKTGGGAGGHNGIRSIDQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLP-IIDNIARSLPLLAKREDVS 179
G +++R+R+GIG P D A + +VL +F+ ER +P +ID +AR P L ++
Sbjct: 120 HLGNDFQRIRLGIGHPGDKAKVHGYVLSDFAKAERNGWVPTLIDAVAREAPALLAGDEGR 179
Query: 180 FLNHIV 185
F++ +
Sbjct: 180 FMSRVT 185
>gi|329925502|ref|ZP_08280376.1| aminoacyl-tRNA hydrolase [Paenibacillus sp. HGF5]
gi|328939785|gb|EGG36125.1| aminoacyl-tRNA hydrolase [Paenibacillus sp. HGF5]
Length = 187
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 107/170 (62%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y + RHN+GFM +D + H + K + I+EG + G +T+LIK
Sbjct: 1 MKWIVGLGNPGPNYEKTRHNVGFMALDALAERHGLKFNQNKCKSVIAEGMIGGTKTVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ M++YK+ +LE+ +V++DDLD G +RL+ G GHNG+KSI +
Sbjct: 61 PMTFMNLSGEAVRAYMDYYKV-SLEDMIVVYDDLDTVVGKIRLRYQGSAGGHNGIKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +++ R+R+GI RP I+ +VLG F ER L +++ +L
Sbjct: 120 HTGTQSFNRVRMGISRPEPGYAIVDYVLGTFPKKEREQLQHMVEETCDAL 169
>gi|289433568|ref|YP_003463440.1| Peptidyl-tRNA hydrolase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289169812|emb|CBH26350.1| pth [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 184
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 112/183 (61%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ +SE ++G + +L+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMVSEININGEKMLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + +M++Y +P +E+ L+++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGVCIRPLMDYYNIP-IEDVLIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ R P +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVNR-PSHGEVINYVLGDFPKAEQPDIIEAIQKSADAIEDFARTPFIE 178
Query: 180 FLN 182
+N
Sbjct: 179 IMN 181
>gi|291535573|emb|CBL08685.1| peptidyl-tRNA hydrolase [Roseburia intestinalis M50/1]
Length = 212
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 111/183 (60%), Gaps = 1/183 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHNIGF +D + + +KK A +G ++G++ +L K
Sbjct: 21 MFLIVGLGNPGKQYEHTRHNIGFDVMDALAEKYNISISEKKHKALCGKGVINGVKVVLAK 80
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E++N+YK+ E +VI+DD+ L G LR++ G GHNG+K+I
Sbjct: 81 PQTYMNLSGESVTELVNYYKMDPEEEMIVIYDDISLAPGNLRIRKKGSAGGHNGIKNIIA 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +N+ R+++G+G P + HVLG+F + +R + I + + ++ E +
Sbjct: 141 MTGTQNFLRIKVGVGEKPAGWDLADHVLGHFDTADRAEVEKAIGHAVEAAEMMITGETDA 200
Query: 180 FLN 182
+N
Sbjct: 201 AMN 203
>gi|125716893|ref|YP_001034026.1| peptidyl-tRNA hydrolase [Streptococcus sanguinis SK36]
gi|166229460|sp|A3CJX1|PTH_STRSV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|125496810|gb|ABN43476.1| Peptidyl-tRNA hydrolase, putative [Streptococcus sanguinis SK36]
Length = 189
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 108/169 (63%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM +D+I K F A+I+ L+G + +KP
Sbjct: 4 LIVGLGNPGEKYIETKHNVGFMLVDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR++IGIGRP + ++ HVLG F + +L +D + ++
Sbjct: 123 IGSQEFKRIKIGIGRPKEGVTVVHHVLGKFDKDDYTTILNTLDKVDNAV 171
>gi|110803012|ref|YP_699741.1| peptidyl-tRNA hydrolase [Clostridium perfringens SM101]
gi|119390928|sp|Q0SQ66|PTH_CLOPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110683513|gb|ABG86883.1| peptidyl-tRNA hydrolase [Clostridium perfringens SM101]
Length = 188
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 116/183 (63%), Gaps = 4/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHNIGF ID + + + ++KF EG ++ + IL+K
Sbjct: 1 MILIVGLGNPGKQYEKTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ E +NFYKL + E +V++DD+ LD G LR++ G GHNG+KSI +
Sbjct: 61 PLTYMNLSGESIREFVNFYKLEDDE-IIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G+P D +++ HVLG FS +R + +I ++ ++ + K +
Sbjct: 120 NLGGDKFPRVKVGVGQPKD--NLVNHVLGKFSKEDREHIEKVIPVVSDAIVEIVKNDAKE 177
Query: 180 FLN 182
+N
Sbjct: 178 SMN 180
>gi|261403913|ref|YP_003240154.1| peptidyl-tRNA hydrolase [Paenibacillus sp. Y412MC10]
gi|261280376|gb|ACX62347.1| peptidyl-tRNA hydrolase [Paenibacillus sp. Y412MC10]
Length = 187
Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 107/170 (62%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y + RHN+GFM +D + H + K + I+EG + G +T+LIK
Sbjct: 1 MKWIVGLGNPGPNYEKTRHNVGFMALDALAERHGLKFNQNKCKSVIAEGMIGGTKTVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ M++YK+ +LE+ +V++DDLD G +RL+ G GHNG+KSI +
Sbjct: 61 PMTFMNLSGEAVRAYMDYYKV-SLEDMIVVYDDLDTVVGKIRLRYQGSAGGHNGIKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +++ R+R+GI RP I+ +VLG F ER L +++ +L
Sbjct: 120 HTGTQSFNRVRMGISRPEPGYAIVDYVLGTFPKKEREQLQHMVEETCDAL 169
>gi|325686482|gb|EGD28511.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK72]
Length = 189
Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 108/169 (63%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM +D+I K F A+I+ L+G + +KP
Sbjct: 4 LIVGLGNPGEKYIETKHNVGFMLVDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR++IGIGRP + ++ HVLG F + +L +D I ++
Sbjct: 123 IGSQEFKRIKIGIGRPKEGMTVVHHVLGKFDKDDYITILNTLDKIDNAV 171
>gi|83595076|ref|YP_428828.1| peptidyl-tRNA hydrolase [Rhodospirillum rubrum ATCC 11170]
gi|119390994|sp|Q2RMV4|PTH_RHORT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|83577990|gb|ABC24541.1| peptidyl-tRNA hydrolase [Rhodospirillum rubrum ATCC 11170]
Length = 243
Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG Y NRHN+GFM + + H +++KF A++++GQ+ G R +L+
Sbjct: 1 MKLVVGLGNPGPRYAGNRHNVGFMAVAALARRHGIGPFRRKFQAQVADGQIAGARLLLLA 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN SGQ++ E F+K+ E+ +V+HD+LDL G +++K GGG GHNG++ I
Sbjct: 61 PETFMNASGQAVGEAARFHKI-APEDIIVLHDELDLAPGKIKVKQGGGAGGHNGIRDIEA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + R+R+GIG P ++ +VLG+F+ E +L P++D +A L+ + F
Sbjct: 120 HLGPAFWRVRLGIGHPGHKDRVLTYVLGDFAKAEEDWLAPMLDAVADHFALMLEGRPADF 179
Query: 181 LNHIVS 186
++ + +
Sbjct: 180 MSKVAA 185
>gi|309789598|ref|ZP_07684179.1| aminoacyl-tRNA hydrolase [Oscillochloris trichoides DG6]
gi|308228334|gb|EFO81981.1| aminoacyl-tRNA hydrolase [Oscillochloris trichoides DG6]
Length = 189
Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 109/184 (59%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG +Y RHNIGF C+D + H K+ ++ ++EG + G R L K
Sbjct: 1 MWLLIGLGNPGEKYDRTRHNIGFACLDALAKRHGLEFRTKRANSLVAEGSIAGQRVALAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ + ++YK+ ++ LVI+DDLDL F LRL+ G HNG++SI
Sbjct: 61 PQTYMNESGRAVSALRSWYKIEPAQDLLVIYDDLDLPFARLRLRERGSSGTHNGMRSIVA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G N + RLR+GI +PP +VL F+ E + + D +A + ++ + ++
Sbjct: 121 QLGSNAFPRLRVGIDQPPGKMDAAAYVLSRFNKEEEAQIPDLCDRVADAAEVVLRDGVIA 180
Query: 180 FLNH 183
+N
Sbjct: 181 AMNR 184
>gi|120405738|ref|YP_955567.1| peptidyl-tRNA hydrolase [Mycobacterium vanbaalenii PYR-1]
gi|166229427|sp|A1TEG1|PTH_MYCVP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119958556|gb|ABM15561.1| peptidyl-tRNA hydrolase [Mycobacterium vanbaalenii PYR-1]
Length = 192
Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 109/176 (61%), Gaps = 5/176 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y RHN GFM +D I + +K KK AE++ G+L G +L K
Sbjct: 6 LVVGLGNPGPQYATTRHNAGFMVVD-ILADRMGEKFKVHKKSGAEVATGRLAGRPVVLAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ +MN SG+ + + FY + + +++HD+LD+DFG +RLK GGG AGHNGL+S++
Sbjct: 65 PRVYMNESGRQVGPLAKFYSVAP-ADVVIVHDELDIDFGRIRLKAGGGVAGHNGLRSVAS 123
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G N ++R+R+GIGRPP VL NF+S ER + I++ A + LL +
Sbjct: 124 ALGGNDFQRVRVGIGRPPGHKSGASFVLENFNSVERKEVPTILEQAADATELLVAQ 179
>gi|291540814|emb|CBL13925.1| peptidyl-tRNA hydrolase [Roseburia intestinalis XB6B4]
Length = 212
Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 111/183 (60%), Gaps = 1/183 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHNIGF +D + + +KK A +G ++G++ +L K
Sbjct: 21 MFLIVGLGNPGKQYEHTRHNIGFDVMDALAEKYNISISEKKHKALCGKGVINGVKVVLAK 80
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E++N+YK+ E +VI+DD+ L G LR++ G GHNG+K+I
Sbjct: 81 PQTYMNLSGESVAELVNYYKMDPEEEMIVIYDDISLAPGNLRIRKKGSAGGHNGIKNIIA 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +N+ R+++G+G P + HVLG+F + +R + I + + ++ E +
Sbjct: 141 MTGTQNFLRIKVGVGEKPAGWDLADHVLGHFDTADRAEVEKAIGHAVEAAEMMITGETDA 200
Query: 180 FLN 182
+N
Sbjct: 201 AMN 203
>gi|240144342|ref|ZP_04742943.1| aminoacyl-tRNA hydrolase [Roseburia intestinalis L1-82]
gi|257203686|gb|EEV01971.1| aminoacyl-tRNA hydrolase [Roseburia intestinalis L1-82]
Length = 212
Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 111/183 (60%), Gaps = 1/183 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHNIGF +D + + +KK A +G ++G++ +L K
Sbjct: 21 MFLIVGLGNPGKQYEHTRHNIGFDVMDALAEKYNISISEKKHKALCGKGVINGVKVVLAK 80
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E++N+YK+ E +VI+DD+ L G LR++ G GHNG+K+I
Sbjct: 81 PQTYMNLSGESVAELVNYYKMDPEEEMIVIYDDISLAPGNLRIRKKGSAGGHNGIKNIIA 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +N+ R+++G+G P + HVLG+F + +R + I + + ++ E +
Sbjct: 141 MTGTQNFLRIKVGVGEKPAGWDLADHVLGHFDAADRAEVEKAIGHAVEAAEMMITGETDA 200
Query: 180 FLN 182
+N
Sbjct: 201 AMN 203
>gi|187777478|ref|ZP_02993951.1| hypothetical protein CLOSPO_01046 [Clostridium sporogenes ATCC
15579]
gi|187774406|gb|EDU38208.1| hypothetical protein CLOSPO_01046 [Clostridium sporogenes ATCC
15579]
Length = 189
Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 103/159 (64%), Gaps = 4/159 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGN G EY + RHNIGF ID I + ++KF EG++ + IL+K
Sbjct: 1 MYLVVGLGNIGEEYKKTRHNIGFDAIDIIAEEYNIEINRQKFKGSYGEGRIGNEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NFYK+ N EN +VI+DD+ +D G LR++ G GHNG+K+I +
Sbjct: 61 PSTYMNLSGESVIEAANFYKI-NKENIIVIYDDMSIDIGKLRIRGKGSAGGHNGIKNIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+ + R+R+GIG+P +++ +VLG FS +R +
Sbjct: 120 HLNSDIFPRVRVGIGQPD--GNVVNYVLGKFSKEQREII 156
>gi|327463839|gb|EGF10155.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK1057]
Length = 189
Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 109/169 (64%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM +D+I + K F A+I+ L+G + +KP
Sbjct: 4 LIVGLGNPGEKYIETKHNVGFMLVDKICKYLDLKFTADKIFQADIASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR++IGIGRP + ++ HVLG F + +L +D + ++
Sbjct: 123 IGSQEFKRIKIGIGRPKEGMTVVHHVLGKFDKDDYITILNTLDKVDNAV 171
>gi|302876605|ref|YP_003845238.1| peptidyl-tRNA hydrolase [Clostridium cellulovorans 743B]
gi|307687279|ref|ZP_07629725.1| peptidyl-tRNA hydrolase [Clostridium cellulovorans 743B]
gi|302579462|gb|ADL53474.1| peptidyl-tRNA hydrolase [Clostridium cellulovorans 743B]
Length = 188
Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 106/170 (62%), Gaps = 4/170 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGN G EY RHN+GF +D + + + KF EI EG ++ + IL+K
Sbjct: 1 MFVIFGLGNIGKEYESTRHNVGFEVVDILADKYNIQVNRVKFKGEIGEGFINNEKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + EVM+FYK+P EN +VI+DD+ LD G LR++ G GHNG+K+I
Sbjct: 61 PTTYMNLSGECVREVMDFYKIPK-ENLIVIYDDISLDVGKLRIRQKGSAGGHNGIKNILL 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R+++G+G P ++I HVLG F E+ + + D A+ +
Sbjct: 120 HLGNDVFPRVKVGVGAPK--GNLINHVLGRFQKEEQETMNKVYDVAAQGV 167
>gi|269797672|ref|YP_003311572.1| peptidyl-tRNA hydrolase [Veillonella parvula DSM 2008]
gi|269094301|gb|ACZ24292.1| peptidyl-tRNA hydrolase [Veillonella parvula DSM 2008]
Length = 192
Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 97/153 (63%), Gaps = 2/153 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + +HNIGFM ID I W+++ AE+ +DG + +L+K
Sbjct: 1 MKLVVGLGNPGKQYEKTKHNIGFMVIDAIADSAPHTPWREEQRAEVCSITVDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ +M +YK+ + Y I+DD+DL G LR++ G GHNG+KS+
Sbjct: 61 PQTFMNLSGESVGPLMRYYKIDPSDVY-CIYDDMDLPIGKLRIRPNGSSGGHNGIKSLIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSS 152
G +N+ R R+GIGRP +I HVL FS
Sbjct: 120 HIGTENFPRFRVGIGRPLPQWTVIDHVLAPFSE 152
>gi|322807865|emb|CBZ05440.1| peptidyl-tRNA hydrolase [Clostridium botulinum H04402 065]
Length = 189
Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 108/169 (63%), Gaps = 4/169 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGN G EY + RHNIGF +D I + ++KF EG++ + IL+K
Sbjct: 1 MYLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NFYK+ EN +VI+DD+ +D G LR++ G GHNG+K+I +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDK-ENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
+ + R+R+GIG+P + +++ +VLG FS ER + ++ A++
Sbjct: 120 HLNSDIFPRVRVGIGQPDE--NVVNYVLGKFSKDEREIIEKVLSMSAKA 166
>gi|91762773|ref|ZP_01264738.1| Peptidyl-tRNA hydrolase [Candidatus Pelagibacter ubique HTCC1002]
gi|91718575|gb|EAS85225.1| Peptidyl-tRNA hydrolase [Candidatus Pelagibacter ubique HTCC1002]
Length = 186
Score = 137 bits (345), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 104/176 (59%), Gaps = 1/176 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP + NRHNIGF ID ++ K KF ++ G ++ + IK
Sbjct: 1 MLLFVGLGNPTPDSENNRHNIGFKLIDALNQKFGLSKQKPKFKGLLTTGNIEDKKVYAIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + E++ ++K+ + E+ +V HDDLDL+FG ++ K G AGHNG++SI +
Sbjct: 61 PLTFMNNSGICIRELIEYFKI-DAEDVIVFHDDLDLEFGKVKAKFAGSSAGHNGIESIDK 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
GK+Y R+RIGIG+P A + HVL +F E L I NI S+ +L ++
Sbjct: 120 FIGKDYSRVRIGIGKPKTKADVADHVLKDFDEDEMIQLEKITKNIIDSMAILIDKK 175
>gi|330813693|ref|YP_004357932.1| peptidyl-tRNA hydrolase [Candidatus Pelagibacter sp. IMCC9063]
gi|327486788|gb|AEA81193.1| peptidyl-tRNA hydrolase [Candidatus Pelagibacter sp. IMCC9063]
Length = 185
Score = 137 bits (345), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 107/177 (60%), Gaps = 3/177 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF+ GLGNP ++ NRHNIGF+ ID ++ K KF ++ G+++ + IL+K
Sbjct: 1 MFLFVGLGNPDPKHKNNRHNIGFIIIDSLNKRFNLSKQKPKFKGLLTNGEINNQKLILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKL-PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMN SG + E+ ++YK+ P +N V HDDLDL+ G +R K GG GHNG+KSI
Sbjct: 61 PLTFMNNSGTCIREIQDYYKIIP--KNVFVFHDDLDLEIGKIRCKVGGSSGGHNGIKSIE 118
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
+ G N+ R+R+GIG P + + HVL +F+ E + + + ++ LL +R+
Sbjct: 119 DAIGPNFYRIRVGIGHPGEKKLVDSHVLNDFTDEETEVIDISVQKLLDNVHLLIERD 175
>gi|317051468|ref|YP_004112584.1| peptidyl-tRNA hydrolase [Desulfurispirillum indicum S5]
gi|316946552|gb|ADU66028.1| peptidyl-tRNA hydrolase [Desulfurispirillum indicum S5]
Length = 191
Score = 137 bits (344), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 107/170 (62%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +RHNIGFM ++RI P++++KF + EG + +L+
Sbjct: 1 MKLIVGLGNPGAQYRNHRHNIGFMVVERIAQKLGVPSFRQKFSGLLGEGTFAQQKILLLM 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG S+ +V+ ++KL ++ +VI DDLD+ +G +LK GG GHNG+ I+
Sbjct: 61 PQTYMNLSGDSVSQVLGWHKLSPVD-MIVIQDDLDMAYGRFKLKMGGSPGGHNGIADITR 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
KCG Y R + GIG+P + +HVL +FSS + L +++ A ++
Sbjct: 120 KCGTPQYIRAKCGIGKPEPPMSVNQHVLSSFSSEQIQSLDSFLNHAAEAV 169
>gi|315274584|ref|ZP_07869460.1| peptidyl-tRNA hydrolase [Listeria marthii FSL S4-120]
gi|313615786|gb|EFR89038.1| peptidyl-tRNA hydrolase [Listeria marthii FSL S4-120]
Length = 186
Score = 137 bits (344), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEINVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPI-KGEVINYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLN 182
+N
Sbjct: 179 VMN 181
>gi|172056087|ref|YP_001812547.1| peptidyl-tRNA hydrolase [Exiguobacterium sibiricum 255-15]
gi|229576703|sp|B1YGP7|PTH_EXIS2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|171988608|gb|ACB59530.1| Aminoacyl-tRNA hydrolase [Exiguobacterium sibiricum 255-15]
Length = 185
Score = 137 bits (344), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 101/159 (63%), Gaps = 2/159 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y RHNIGF+ ID + H + KF A G + G R +L+K
Sbjct: 1 MKCIVGLGNPGAKYTNTRHNIGFLAIDALAKEHGIKLTESKFKAVFGTGMIKGERVVLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ +++FYK+ +E+ LVI+DDLDL +RL++ G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGEAVRPLLDFYKIA-VEDVLVIYDDLDLPLEKMRLRSKGSAGGHNGVKSLIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G ++ KRL++G+GRPP +I VL F+ E+ L
Sbjct: 120 HLGTQDIKRLKLGVGRPPAPIQVIDWVLMPFAKSEQTTL 158
>gi|52078548|ref|YP_077339.1| peptidyl-tRNA hydrolase [Bacillus licheniformis ATCC 14580]
gi|52783910|ref|YP_089739.1| peptidyl-tRNA hydrolase [Bacillus licheniformis ATCC 14580]
gi|319648577|ref|ZP_08002791.1| peptidyl-tRNA hydrolase [Bacillus sp. BT1B_CT2]
gi|68052915|sp|Q65PG8|PTH_BACLD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|52001759|gb|AAU21701.1| peptidyl-tRNA hydrolase [Bacillus licheniformis ATCC 14580]
gi|52346412|gb|AAU39046.1| SpoVC [Bacillus licheniformis ATCC 14580]
gi|317389344|gb|EFV70157.1| peptidyl-tRNA hydrolase [Bacillus sp. BT1B_CT2]
Length = 188
Score = 137 bits (344), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 105/169 (62%), Gaps = 2/169 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + AGLGNPG Y RHN+GFM ID + P K KF+ + G + G + +L+K
Sbjct: 1 MLVFAGLGNPGKTYENTRHNVGFMTIDELSKEWNIPLDKTKFNGQYGIGFVSGKKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ L ++++Y++P ++N VI+DDLDL G +RL+T G GHNG+KS +
Sbjct: 61 PLTYMNLSGECLRPLLDYYEIP-VDNLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSTIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
G + + R+RIGIGRP + ++ +VLG F+ E + + A++
Sbjct: 120 HLGTSEFNRIRIGIGRPVNGMKVVDYVLGAFTDEEEPAIKEAVRQSAKA 168
>gi|57168448|ref|ZP_00367582.1| peptidyl-tRNA hydrolase [Campylobacter coli RM2228]
gi|305432867|ref|ZP_07402025.1| aminoacyl-tRNA hydrolase [Campylobacter coli JV20]
gi|57020256|gb|EAL56930.1| peptidyl-tRNA hydrolase [Campylobacter coli RM2228]
gi|304444021|gb|EFM36676.1| aminoacyl-tRNA hydrolase [Campylobacter coli JV20]
Length = 180
Score = 137 bits (344), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 114/189 (60%), Gaps = 11/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGN G EY + RHN+GFM ID + +F KF E+ + ++L+
Sbjct: 1 MILVVGLGNIGKEYEDTRHNVGFMLIDLLLKEGNFTNLTNSKFKGELFKMG----SSLLL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG S+ V +FYK E +V+HDD+D++ G LR K GG GHNGLKSI
Sbjct: 57 KPHTYMNNSGLSVKAVNDFYKC---ERIIVVHDDIDINLGALRFKRGGSSGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG +Y+R+RIG+G+ + +I HVLG F + E L ++++ ++L L + +D+S
Sbjct: 114 NLCGSDYERVRIGVGKGEN---VISHVLGKFRAEEELILSKVLEHSKKALLELIRNDDLS 170
Query: 180 FLNHIVSVR 188
++ S++
Sbjct: 171 AISSKYSLK 179
>gi|294791582|ref|ZP_06756730.1| aminoacyl-tRNA hydrolase [Veillonella sp. 6_1_27]
gi|294456812|gb|EFG25174.1| aminoacyl-tRNA hydrolase [Veillonella sp. 6_1_27]
Length = 192
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 97/153 (63%), Gaps = 2/153 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + +HNIGFM ID I W+++ AE+ +DG + +L+K
Sbjct: 1 MKLVVGLGNPGKQYEKTKHNIGFMVIDAIADSVPHTPWREEQRAEVCSITVDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ +M +YK+ + Y I+DD+DL G LR++ G GHNG+KS+
Sbjct: 61 PQTFMNLSGESVGPLMRYYKIDPSDVY-CIYDDMDLPIGKLRIRPNGSSGGHNGIKSLIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSS 152
G +N+ R R+GIGRP +I HVL FS
Sbjct: 120 HIGTENFPRFRVGIGRPLPQWTVIDHVLAPFSE 152
>gi|168181009|ref|ZP_02615673.1| peptidyl-tRNA hydrolase [Clostridium botulinum NCTC 2916]
gi|226950996|ref|YP_002806087.1| peptidyl-tRNA hydrolase [Clostridium botulinum A2 str. Kyoto]
gi|254783862|sp|C1FNE6|PTH_CLOBJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|182668160|gb|EDT80139.1| peptidyl-tRNA hydrolase [Clostridium botulinum NCTC 2916]
gi|226842368|gb|ACO85034.1| aminoacyl-tRNA hydrolase [Clostridium botulinum A2 str. Kyoto]
Length = 189
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 108/169 (63%), Gaps = 4/169 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGN G EY + RHNIGF +D I + ++KF EG++ + IL+K
Sbjct: 1 MYLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NFYK+ EN +VI+DD+ +D G LR++ G GHNG+K+I +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDK-ENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
+ + R+R+GIG+P + +++ +VLG FS ER + ++ A++
Sbjct: 120 HLNSDIFPRVRVGIGQPDE--NVVNYVLGKFSKDEREIIEKVLAMSAKA 166
>gi|325678539|ref|ZP_08158150.1| aminoacyl-tRNA hydrolase [Ruminococcus albus 8]
gi|324109758|gb|EGC03963.1| aminoacyl-tRNA hydrolase [Ruminococcus albus 8]
Length = 208
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 112/173 (64%), Gaps = 3/173 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+ GLGNPG +Y +RHN GF+ +D + F ++KF A++ + G +++KP
Sbjct: 23 YIIVGLGNPGIQYDGSRHNAGFITVDALEKKLGFSCERRKFKAKVGNTVIGGKNCLVMKP 82
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+TFMNLSG ++ E M+FYK+P +EN +VI DD+ L+ G LR++ G GHNG+KSI +
Sbjct: 83 ETFMNLSGDAVSEAMDFYKIP-IENVIVIFDDISLEPGQLRIRRKGSAGGHNGIKSIIAQ 141
Query: 122 CG-KNYKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
CG +++ R+++G+G+ P+ A+ + + VLG FS +R + + +L L+
Sbjct: 142 CGSEDFPRIKLGVGKKPNPAYDLAKWVLGRFSEDDRKKIDIAAEKACDALELM 194
>gi|254491100|ref|ZP_05104281.1| peptidyl-tRNA hydrolase [Methylophaga thiooxidans DMS010]
gi|224463613|gb|EEF79881.1| peptidyl-tRNA hydrolase [Methylophaga thiooxydans DMS010]
Length = 190
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 108/171 (63%), Gaps = 3/171 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+I+AGLGNPG +Y RHN+GF +D++ + ++H ++ + LD + L+K
Sbjct: 4 WIIAGLGNPGSQYEGTRHNVGFWLLDQLARELGANFTVQNRYHGQLVQCSLDEHKVYLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P TFMN SGQS+ + NFYK+P L+N LV+HD+LDL+ G +RLK GG GHNGL+ I+
Sbjct: 64 PLTFMNRSGQSVAALANFYKIP-LQNILVVHDELDLEPGVVRLKRDGGHGGHNGLRDIIA 122
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ GKN+ R R+GIG P + + +VL S +R + IDN+ + LP
Sbjct: 123 QTGGKNFLRCRLGIGHPGHSKLVSDYVLSKPSPTDRQQVETAIDNVLQILP 173
>gi|153854682|ref|ZP_01995932.1| hypothetical protein DORLON_01930 [Dorea longicatena DSM 13814]
gi|149752786|gb|EDM62717.1| hypothetical protein DORLON_01930 [Dorea longicatena DSM 13814]
Length = 194
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 110/184 (59%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNP +Y RHN+GF ID + + +K A + +G ++G + +L+K
Sbjct: 1 MFIIAGLGNPTLQYEGTRHNVGFDVIDMLADRYNISVDGRKGRALVGKGIIEGQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+SL E++N+YK+ LVI+DD+ LD G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESLRELVNYYKIDEEHELLVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R++IG+G P + +VLG+FS +R + D ++ ++ E +
Sbjct: 121 NLGTDVFPRIKIGVGEKPKKYDLADYVLGHFSKEDRELMEEGYDRADHAVGMILNGEIEA 180
Query: 180 FLNH 183
+N
Sbjct: 181 AMNQ 184
>gi|282848944|ref|ZP_06258333.1| aminoacyl-tRNA hydrolase [Veillonella parvula ATCC 17745]
gi|294793436|ref|ZP_06758573.1| aminoacyl-tRNA hydrolase [Veillonella sp. 3_1_44]
gi|282581219|gb|EFB86613.1| aminoacyl-tRNA hydrolase [Veillonella parvula ATCC 17745]
gi|294455006|gb|EFG23378.1| aminoacyl-tRNA hydrolase [Veillonella sp. 3_1_44]
Length = 192
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 97/153 (63%), Gaps = 2/153 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + +HNIGFM ID I W+++ AE+ +DG + +L+K
Sbjct: 1 MKLVVGLGNPGKQYEKTKHNIGFMVIDAIADSVPHTPWREEQRAEVCSITVDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ +M +YK+ + Y I+DD+DL G LR++ G GHNG+KS+
Sbjct: 61 PQTFMNLSGESVGPLMRYYKIDPSDVY-CIYDDMDLPIGKLRIRPNGSSGGHNGIKSLIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSS 152
G +N+ R R+GIGRP +I HVL FS
Sbjct: 120 HIGTENFPRFRVGIGRPLPQWTVIDHVLAPFSE 152
>gi|283955737|ref|ZP_06373228.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 1336]
gi|283792692|gb|EFC31470.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 1336]
Length = 181
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 113/189 (59%), Gaps = 10/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGN G EY RHN+GFM ID + +F KF E+ + G +L+
Sbjct: 1 MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFKGELFK---IGSSLLLL 57
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG S+ V +FYK E +VIHDD+D++ G+LR K GG GHNGLKSI
Sbjct: 58 KPSTYMNNSGLSVKAVNDFYKC---ERMIVIHDDIDINLGSLRFKKGGSSGGHNGLKSID 114
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG +Y+R+RIG+G+ + +I HVLG F E L ++++ ++L L + +D+S
Sbjct: 115 TLCGNDYERVRIGVGKGEN---VISHVLGKFKPEEEITLSKVLEHTKKALLELIENDDLS 171
Query: 180 FLNHIVSVR 188
++ S++
Sbjct: 172 AISSKYSLK 180
>gi|312866881|ref|ZP_07727094.1| aminoacyl-tRNA hydrolase [Streptococcus parasanguinis F0405]
gi|311097664|gb|EFQ55895.1| aminoacyl-tRNA hydrolase [Streptococcus parasanguinis F0405]
Length = 189
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 107/169 (63%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM +D++ S + + K F A+I+ L+G + +KP
Sbjct: 4 LIVGLGNPGDKYVETKHNVGFMLVDQMAKSLNLTFSHDKIFQADIASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIINH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R++IGIGRP ++ HVLG F + +L ID + ++
Sbjct: 123 IGTQTFYRIKIGIGRPKQGMSVVHHVLGKFDKDDYITILQTIDRVEEAV 171
>gi|153814528|ref|ZP_01967196.1| hypothetical protein RUMTOR_00742 [Ruminococcus torques ATCC 27756]
gi|317500571|ref|ZP_07958792.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089328|ref|ZP_08338229.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 3_1_46FAA]
gi|145848022|gb|EDK24940.1| hypothetical protein RUMTOR_00742 [Ruminococcus torques ATCC 27756]
gi|316898004|gb|EFV20054.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330405509|gb|EGG85041.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 3_1_46FAA]
Length = 193
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 103/173 (59%), Gaps = 1/173 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNP +Y RHN+GF IDRI + KK A I +G + G + IL K
Sbjct: 1 MFIIAGLGNPTKQYEGTRHNVGFEVIDRISEKYNIDVDAKKHRALIGKGIIQGQKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ ++++YK+ +VI+DD+ LD G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESVRSLLDYYKVDEEHELIVIYDDISLDVGQLRIRAKGSAGGHNGMKNIIA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + R+++G+G P + +VLG+FS E + D+ ++ L+
Sbjct: 121 HLGSQVFPRIKVGVGEKPAKYDLADYVLGHFSKGEAKLMDEGYDHAVHAVELI 173
>gi|304321413|ref|YP_003855056.1| peptidyl-tRNA hydrolase [Parvularcula bermudensis HTCC2503]
gi|303300315|gb|ADM09914.1| peptidyl-tRNA hydrolase [Parvularcula bermudensis HTCC2503]
Length = 231
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 117/180 (65%), Gaps = 2/180 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +NRHN GF ++ IH H F + KF ++EG++ R ++
Sbjct: 1 MILLIGLGNPGAQYAQNRHNAGFHAVEEIHGAHDFGPERSKFRGALAEGRVGSCRAFTLR 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+ N SG ++L FYK+P L++ +V HD++DL G +R+K GGG AG+NGL+SI+
Sbjct: 61 PDTYYNDSGTAVLAASQFYKIP-LDDIIVFHDEIDLAPGKVRVKKGGGLAGNNGLRSIAA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERY-FLLPIIDNIARSLPLLAKREDVS 179
G ++ R+RIGIG P ++ +VLGNFS ER + +++ +ARSLPLL R++ +
Sbjct: 120 HLGPDFWRVRIGIGHPGHKDKVMPYVLGNFSKAERTDYYDDLLERMARSLPLLMPRDEAA 179
>gi|226323671|ref|ZP_03799189.1| hypothetical protein COPCOM_01446 [Coprococcus comes ATCC 27758]
gi|225207855|gb|EEG90209.1| hypothetical protein COPCOM_01446 [Coprococcus comes ATCC 27758]
Length = 191
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 100/159 (62%), Gaps = 1/159 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNP +Y RHN+GF +DR+ + KK A I +G ++G + +L+K
Sbjct: 1 MFIIAGLGNPDEKYQGTRHNVGFDVVDRLAEKYQIAIDTKKHRALIGKGVIEGQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ ++ +YK+ E LVI+DD+ L+ G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESIRSLVEYYKIDPEEELLVIYDDISLEVGQLRIRRKGSAGGHNGIKNIIA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G + + R+++G+G P + +VLG FS +R +
Sbjct: 121 NLGSSVFPRIKVGVGEKPKGYDLADYVLGKFSKEDRVLM 159
>gi|258513563|ref|YP_003189785.1| peptidyl-tRNA hydrolase [Desulfotomaculum acetoxidans DSM 771]
gi|257777268|gb|ACV61162.1| peptidyl-tRNA hydrolase [Desulfotomaculum acetoxidans DSM 771]
Length = 196
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 100/164 (60%), Gaps = 3/164 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID++ + KK + + +G L + IL K
Sbjct: 1 MKLIVGLGNPGIEYRNTRHNIGFMVIDQLAEKYGVDVQKKMMRSVLGQGWLGSQKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSGQS+ +MN+YKL E LVI DDL+L+ G LRL+ G D GHNGLKSI +
Sbjct: 61 PLTYMNLSGQSVQALMNWYKLTAQE-LLVICDDLNLEAGHLRLRKKGSDGGHNGLKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPII 162
G ++ RLR+GIGRP + VLG F+ E L +I
Sbjct: 120 ALGTSDFPRLRLGIGRPSHPGQEQVSFVLGKFAPQEAELLSQLI 163
>gi|117929151|ref|YP_873702.1| peptidyl-tRNA hydrolase [Acidothermus cellulolyticus 11B]
gi|117649614|gb|ABK53716.1| peptidyl-tRNA hydrolase [Acidothermus cellulolyticus 11B]
Length = 196
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG Y +NRHN+GFM +D + + +++ G+L G +L KP
Sbjct: 6 WLVVGLGNPGPAYAKNRHNVGFMVVDLLAERAGMRFTVHRTRTQLANGRLAGQPAMLAKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
++MN SG + +++++++P E +V+HD+LDL FG LR+K GGGDAGHNGL+SI+
Sbjct: 66 LSYMNQSGGPVAGLLHYFRIPR-ERLIVVHDELDLPFGVLRVKRGGGDAGHNGLRSITAA 124
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G +Y R+R GIGRPP +VL +FS+ ER L
Sbjct: 125 LRGADYLRVRFGIGRPPPHLDPAEYVLRDFSAAERAEL 162
>gi|254825873|ref|ZP_05230874.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL J1-194]
gi|293595112|gb|EFG02873.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL J1-194]
Length = 186
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFYGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVIHYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLN 182
+N
Sbjct: 179 VMN 181
>gi|168183620|ref|ZP_02618284.1| aminoacyl-tRNA hydrolase [Clostridium botulinum Bf]
gi|237797001|ref|YP_002864553.1| peptidyl-tRNA hydrolase [Clostridium botulinum Ba4 str. 657]
gi|259535145|sp|C3KW96|PTH_CLOB6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|182673238|gb|EDT85199.1| aminoacyl-tRNA hydrolase [Clostridium botulinum Bf]
gi|229262516|gb|ACQ53549.1| aminoacyl-tRNA hydrolase [Clostridium botulinum Ba4 str. 657]
Length = 189
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 108/169 (63%), Gaps = 4/169 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGN G EY + RHNIGF +D I + ++KF EG++ + IL+K
Sbjct: 1 MYLVVGLGNIGKEYKQTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NFYK+ EN +VI+DD+ +D G LR++ G GHNG+K+I +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDK-ENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
+ + R+R+GIG+P + +++ +VLG FS +R + ++ A++
Sbjct: 120 HLNSDIFPRVRVGIGQPDE--NVVNYVLGKFSKDQREIIEKVLAMSAKA 166
>gi|154483283|ref|ZP_02025731.1| hypothetical protein EUBVEN_00984 [Eubacterium ventriosum ATCC
27560]
gi|149735793|gb|EDM51679.1| hypothetical protein EUBVEN_00984 [Eubacterium ventriosum ATCC
27560]
Length = 184
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 104/173 (60%), Gaps = 3/173 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+ V GLGNP EY + RHNIGF ID + S K+ A G + G + IL+K
Sbjct: 1 MYAVFGLGNPDKEYDKTRHNIGFDVIDELASQMGVEVKTKRHKALCGIGNIGGEKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ VM+FYKL + +VI DD++L G +R++ G GHNGLKSI
Sbjct: 61 PQTYMNLSGESVRAVMDFYKLDPENDIIVISDDINLATGRIRIRAQGSAGGHNGLKSIIN 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + +KR+R+G+G + +++ HVLG FS ER I + A ++ ++
Sbjct: 121 HAGTQKFKRVRVGVG--ANEGNLVNHVLGKFSKGERVLAEQGIKDAASAVEVM 171
>gi|57237363|ref|YP_178376.1| peptidyl-tRNA hydrolase [Campylobacter jejuni RM1221]
gi|86151320|ref|ZP_01069535.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 260.94]
gi|68052878|sp|Q5HWF9|PTH_CAMJR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|57166167|gb|AAW34946.1| peptidyl-tRNA hydrolase [Campylobacter jejuni RM1221]
gi|85841667|gb|EAQ58914.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 260.94]
gi|315057733|gb|ADT72062.1| Peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni S3]
Length = 181
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 112/189 (59%), Gaps = 10/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGN G EY RHN+GFM ID + +F KF E+ + G +L+
Sbjct: 1 MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFKGELFK---IGSSLLLL 57
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG S+ V +FYK E +VIHDD+D++ G LR K GG GHNGLKSI
Sbjct: 58 KPSTYMNNSGLSVKAVNDFYKC---ERMIVIHDDIDINLGALRFKKGGSSGGHNGLKSID 114
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG +Y+R+RIG+G+ + +I HVLG F E L ++++ ++L L + +D+S
Sbjct: 115 TLCGNDYERVRIGVGKGEN---VISHVLGKFKPEEEITLSKVLEHTKKALLELIENDDLS 171
Query: 180 FLNHIVSVR 188
++ S++
Sbjct: 172 AISSKYSLK 180
>gi|108801218|ref|YP_641415.1| peptidyl-tRNA hydrolase [Mycobacterium sp. MCS]
gi|119870369|ref|YP_940321.1| peptidyl-tRNA hydrolase [Mycobacterium sp. KMS]
gi|126437198|ref|YP_001072889.1| peptidyl-tRNA hydrolase [Mycobacterium sp. JLS]
gi|119390965|sp|Q1B425|PTH_MYCSS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229423|sp|A3Q5H1|PTH_MYCSJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229424|sp|A1UL23|PTH_MYCSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|108771637|gb|ABG10359.1| peptidyl-tRNA hydrolase [Mycobacterium sp. MCS]
gi|119696458|gb|ABL93531.1| peptidyl-tRNA hydrolase [Mycobacterium sp. KMS]
gi|126236998|gb|ABO00399.1| peptidyl-tRNA hydrolase [Mycobacterium sp. JLS]
Length = 192
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 111/176 (63%), Gaps = 9/176 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID----RIHSFHFFPAWKKKFHAEISEGQLDGLRTI 57
+V GLGNPG Y + RHN+GF+ D RI S F A +K A+I+ G+L G +
Sbjct: 5 LLVVGLGNPGPNYAKTRHNVGFVVADLLAGRIGSG--FKAHRKS-GADIATGRLAGRAVV 61
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP+T+MN SG+++ + FY + + +VIHD+LD+DFG +RLK GGG AGHNGLKS
Sbjct: 62 LAKPRTYMNESGRNVGPLAKFYSVAP-ADVIVIHDELDIDFGRIRLKFGGGVAGHNGLKS 120
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
++ G K+++R+R+G+GRPP +VL F+S ER + I + A + LL
Sbjct: 121 VAAALGTKDFQRVRVGVGRPPGRKDAATYVLEPFTSVERPEVPTICEQAADATELL 176
>gi|313625454|gb|EFR95203.1| peptidyl-tRNA hydrolase [Listeria innocua FSL J1-023]
Length = 184
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ +SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMVSEINVGGEKIILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y + +E+ L+++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNI-QIEDVLIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVIHYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLN 182
+N
Sbjct: 179 VMN 181
>gi|16799322|ref|NP_469590.1| peptidyl-tRNA hydrolase [Listeria innocua Clip11262]
gi|21263851|sp|Q92F62|PTH_LISIN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|16412674|emb|CAC95478.1| pth [Listeria innocua Clip11262]
gi|313621016|gb|EFR92139.1| peptidyl-tRNA hydrolase [Listeria innocua FSL S4-378]
Length = 184
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ +SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMVSEINVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y + +E+ L+++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNI-QIEDVLIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVIHYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLN 182
+N
Sbjct: 179 VMN 181
>gi|149194452|ref|ZP_01871549.1| peptidyl-tRNA hydrolase [Caminibacter mediatlanticus TB-2]
gi|149135627|gb|EDM24106.1| peptidyl-tRNA hydrolase [Caminibacter mediatlanticus TB-2]
Length = 179
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 94/154 (61%), Gaps = 5/154 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +NRHN+GFM ID + KF E+ + + +K
Sbjct: 1 MKLIVGLGNPGKKYEKNRHNVGFMVIDYLIDKFRASKLSSKFKGELFKSN----DFLFLK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ V +FYK+ N ++ +VIHDDLDL G L+ K GG GHNGLKSI
Sbjct: 57 PTTFMNLSGESIKLVKDFYKIDN-KDIIVIHDDLDLKLGALKFKRGGSSGGHNGLKSIDN 115
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +Y R+RIGIGRP ++ +VL NF E
Sbjct: 116 LIGNDYYRIRIGIGRPEKKEEVVNYVLNNFHENE 149
>gi|167747444|ref|ZP_02419571.1| hypothetical protein ANACAC_02164 [Anaerostipes caccae DSM 14662]
gi|317471173|ref|ZP_07930544.1| peptidyl-tRNA hydrolase [Anaerostipes sp. 3_2_56FAA]
gi|167652806|gb|EDR96935.1| hypothetical protein ANACAC_02164 [Anaerostipes caccae DSM 14662]
gi|316901388|gb|EFV23331.1| peptidyl-tRNA hydrolase [Anaerostipes sp. 3_2_56FAA]
Length = 190
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 107/180 (59%), Gaps = 3/180 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF ID I + KK A I G L G + +L+K
Sbjct: 1 MKVIVGLGNPGRQYERTRHNIGFAAIDYIAGKNQIEISSKKHKALIGSGYLGGQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+SL VM+FYKL +++VI DD+ LD G LR++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGESLRGVMDFYKLEP-SDFIVIFDDISLDVGQLRIRRKGSAGGHNGIKSIIS 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ R++IG+G P + +VLG+FS E + ++ ++ L+ +D+S
Sbjct: 120 HLGSMDFPRIKIGVGEKPKGYDLADYVLGHFSKGEIEIYDDVFPDVDDAVKLMV-MDDIS 178
>gi|229829773|ref|ZP_04455842.1| hypothetical protein GCWU000342_01870 [Shuttleworthia satelles DSM
14600]
gi|229791762|gb|EEP27876.1| hypothetical protein GCWU000342_01870 [Shuttleworthia satelles DSM
14600]
Length = 212
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 113/189 (59%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y +RHN GF IDR+ + + KF A +G ++G + +L+K
Sbjct: 13 MYMIAGLGNPGEKYRHSRHNAGFDTIDRLADQYGICLREMKFEALYGKGLIEGRQVLLVK 72
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+SL + + FY+L LE+ LVI DD+ LD G +R++ G GHNGLKSI
Sbjct: 73 PTTYMNDSGRSLQQFVRFYQLDPLEDMLVISDDVTLDCGVIRVRKQGSAGGHNGLKSIIA 132
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+G+G+ P +I HVLG ER + ++ A + ++ + + V
Sbjct: 133 CLGTDCFPRVRVGVGKVPTGGDMIAHVLGRIRPEERENMALGEEHAAEAAVMVMEGQIVE 192
Query: 180 FLNHIVSVR 188
+N +R
Sbjct: 193 AMNRYNGMR 201
>gi|197106325|ref|YP_002131702.1| peptidyl-tRNA hydrolase [Phenylobacterium zucineum HLK1]
gi|238690128|sp|B4R8Q8|PTH_PHEZH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|196479745|gb|ACG79273.1| peptidyl-tRNA hydrolase [Phenylobacterium zucineum HLK1]
Length = 209
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 121/191 (63%), Gaps = 5/191 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG----LRT 56
M ++AGLGNPG Y +NRHNIGFM +D I FPA + +F + +EG +D +RT
Sbjct: 1 MLLIAGLGNPGPTYAKNRHNIGFMAVDEIARRWGFPAARSRFRSLAAEGAIDTPQGPVRT 60
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+++KPQT+ N SG+++ E M F+KL + +V +D++DL G R+KTGGG AG+NG++
Sbjct: 61 LILKPQTYYNESGRAVGEAMKFFKL-QPSDVVVFYDEIDLAPGRFRMKTGGGAAGNNGIR 119
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
S++ + G +++R R+G G P + HVL +F E ++ P+++ A + PLLA +
Sbjct: 120 SVASQIGPDFRRARLGTGHPGQKELVHGHVLSDFHKAEMKWVEPLLEACADAAPLLALGD 179
Query: 177 DVSFLNHIVSV 187
D + ++ +
Sbjct: 180 DEKYQAEVMRL 190
>gi|116871595|ref|YP_848376.1| peptidyl-tRNA hydrolase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123465946|sp|A0AF11|PTH_LISW6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116740473|emb|CAK19593.1| peptidyl-tRNA hydrolase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 184
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ +SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMVSEINVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y + +E+ L+++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNI-QVEDVLIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ V
Sbjct: 120 HIKTQEFNRIRVGVSRPL-KGEVINYVLGDFPKAEQPDIIAAIQKSADAIEDFAQVPFVE 178
Query: 180 FLN 182
+N
Sbjct: 179 VMN 181
>gi|257462465|ref|ZP_05626877.1| peptidyl-tRNA hydrolase [Fusobacterium sp. D12]
gi|317060122|ref|ZP_07924607.1| peptidyl-tRNA hydrolase [Fusobacterium sp. D12]
gi|313685798|gb|EFS22633.1| peptidyl-tRNA hydrolase [Fusobacterium sp. D12]
Length = 186
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 101/163 (61%), Gaps = 2/163 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHN+GFM ID H K+KF +++SE ++G + +K
Sbjct: 1 MKLVVGLGNPGKKYEKTRHNVGFMAIDLFLKKHAISGEKEKFLSKVSETIMNGEKIYFLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG +L E++ FYK+ L+ LV++DD DL G LR K G GHNG+KSI
Sbjct: 61 PQTYMNLSGNALHEIVQFYKINPLDEILVVYDDKDLPLGKLRYKLKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+ G+ + R++ GIG ++I V+G+F E L +++
Sbjct: 121 QIGQEFCRIKCGIGSTK--GNVIDFVIGDFQKSEEEELQSMLE 161
>gi|16802259|ref|NP_463744.1| peptidyl-tRNA hydrolase [Listeria monocytogenes EGD-e]
gi|47096206|ref|ZP_00233805.1| peptidyl-tRNA hydrolase [Listeria monocytogenes str. 1/2a F6854]
gi|224500336|ref|ZP_03668685.1| peptidyl-tRNA hydrolase [Listeria monocytogenes Finland 1988]
gi|224503467|ref|ZP_03671774.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL R2-561]
gi|254901002|ref|ZP_05260926.1| peptidyl-tRNA hydrolase [Listeria monocytogenes J0161]
gi|254913930|ref|ZP_05263942.1| peptidyl-tRNA hydrolase [Listeria monocytogenes J2818]
gi|254938279|ref|ZP_05269976.1| pth [Listeria monocytogenes F6900]
gi|255028170|ref|ZP_05300121.1| peptidyl-tRNA hydrolase [Listeria monocytogenes LO28]
gi|284803048|ref|YP_003414913.1| peptidyl-tRNA hydrolase [Listeria monocytogenes 08-5578]
gi|284996189|ref|YP_003417957.1| peptidyl-tRNA hydrolase [Listeria monocytogenes 08-5923]
gi|21263846|sp|Q8YAD1|PTH_LISMO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|16409578|emb|CAD00740.1| pth [Listeria monocytogenes EGD-e]
gi|47015454|gb|EAL06388.1| peptidyl-tRNA hydrolase [Listeria monocytogenes str. 1/2a F6854]
gi|258610890|gb|EEW23498.1| pth [Listeria monocytogenes F6900]
gi|284058610|gb|ADB69551.1| peptidyl-tRNA hydrolase [Listeria monocytogenes 08-5578]
gi|284061656|gb|ADB72595.1| peptidyl-tRNA hydrolase [Listeria monocytogenes 08-5923]
gi|293591948|gb|EFG00283.1| peptidyl-tRNA hydrolase [Listeria monocytogenes J2818]
Length = 186
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVINYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLN 182
+N
Sbjct: 179 VMN 181
>gi|194017971|ref|ZP_03056578.1| peptidyl-tRNA hydrolase [Bacillus pumilus ATCC 7061]
gi|194010308|gb|EDW19883.1| peptidyl-tRNA hydrolase [Bacillus pumilus ATCC 7061]
Length = 188
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M GLGNPG EY + RHN+GFM ID + P + KF+ G + G + +L+K
Sbjct: 1 MLAFIGLGNPGKEYEKTRHNVGFMTIDELSKKWDIPLNQSKFNGLFGTGFVSGQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M++Y +P LE+ VI+DDLDL G +RL+T G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECVRPLMDYYDIP-LEHLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQ 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + R RIGIGRP + ++ +VLG FS E+
Sbjct: 120 HLGSPEFDRFRIGIGRPQNGMKVVDYVLGRFSEEEQ 155
>gi|153940404|ref|YP_001392894.1| peptidyl-tRNA hydrolase [Clostridium botulinum F str. Langeland]
gi|166199327|sp|A7GJD4|PTH_CLOBL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|152936300|gb|ABS41798.1| aminoacyl-tRNA hydrolase [Clostridium botulinum F str. Langeland]
gi|295320871|gb|ADG01249.1| aminoacyl-tRNA hydrolase [Clostridium botulinum F str. 230613]
Length = 189
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 108/169 (63%), Gaps = 4/169 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGN G EY + RHNIGF +D I + ++KF EG++ + IL+K
Sbjct: 1 MYLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NFYK+ EN +VI+DD+ +D G LR++ G GHNG+K+I +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDK-ENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
+ + R+R+GIG+P + +++ +VLG FS +R + ++ A++
Sbjct: 120 HLNSDIFPRVRVGIGQPDE--NVVNYVLGKFSKDQREIIEKVLAMSAKA 166
>gi|46906445|ref|YP_012834.1| peptidyl-tRNA hydrolase [Listeria monocytogenes str. 4b F2365]
gi|47093155|ref|ZP_00230930.1| peptidyl-tRNA hydrolase [Listeria monocytogenes str. 4b H7858]
gi|226222842|ref|YP_002756949.1| peptidyl-tRNA hydrolase [Listeria monocytogenes Clip81459]
gi|254854443|ref|ZP_05243791.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL R2-503]
gi|254933053|ref|ZP_05266412.1| peptidyl-tRNA hydrolase [Listeria monocytogenes HPB2262]
gi|254992854|ref|ZP_05275044.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL J2-064]
gi|255520465|ref|ZP_05387702.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL J1-175]
gi|300766346|ref|ZP_07076305.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL N1-017]
gi|67460688|sp|Q724K0|PTH_LISMF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|259535204|sp|C1KYE6|PTH_LISMC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|46879709|gb|AAT03011.1| peptidyl-tRNA hydrolase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47018462|gb|EAL09220.1| peptidyl-tRNA hydrolase [Listeria monocytogenes str. 4b H7858]
gi|225875304|emb|CAS04001.1| Putative peptidyl-tRNA hydrolase [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|258607843|gb|EEW20451.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL R2-503]
gi|293584611|gb|EFF96643.1| peptidyl-tRNA hydrolase [Listeria monocytogenes HPB2262]
gi|300512945|gb|EFK40033.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL N1-017]
gi|328467969|gb|EGF38996.1| peptidyl-tRNA hydrolase [Listeria monocytogenes 1816]
Length = 186
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVIHYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLN 182
+N
Sbjct: 179 VMN 181
>gi|168334868|ref|ZP_02692990.1| peptidyl-tRNA hydrolase [Epulopiscium sp. 'N.t. morphotype B']
Length = 187
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 103/171 (60%), Gaps = 9/171 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y +HN GF +D + ++ K +F EG ++G + +L+K
Sbjct: 1 MKLVIGLGNPGAKYVATKHNAGFYAVDYLAHYYGIAMNKNRFRGISGEGIIEGEKILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+SL+E MNFYKL E LVI+DD + G +++K G GHNG+K+I E
Sbjct: 61 PLTFMNLSGESLIECMNFYKL-TAEEILVIYDDTAFETGVIKMKRTGSAGGHNGIKNIIE 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+N+ R RIGIGRPP+ ++ +VL F+ E I+ I S+P
Sbjct: 120 HIKTQNFPRARIGIGRPPEGYLLVDYVLSKFTDME-------IEKIKDSMP 163
>gi|27262436|gb|AAN87499.1| Peptidyl-tRNA hydrolase [Heliobacillus mobilis]
Length = 190
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 107/184 (58%), Gaps = 2/184 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y + RHNIGFM +D++ +K KF SE +L G + L+K
Sbjct: 1 MKAIVGLGNPGRDYEKTRHNIGFMVVDQLAERWGHDGFKAKFQGSFSEVRLGGQKVFLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQ+ + FYKL E+ LV++DDLDL G LR +T G GHNG+KS+
Sbjct: 61 PQTYMNLSGQAASAMAAFYKLAP-EDILVVYDDLDLPPGKLRGRTKGSSGGHNGIKSLIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +N+ RL++GIGRP +VL +F + E + ID ++ L +R +
Sbjct: 120 CLGSENFPRLKLGIGRPASRQPSASYVLESFRAEELADIQKAIDLACDAVELWLERGMIE 179
Query: 180 FLNH 183
+N
Sbjct: 180 VMNR 183
>gi|225621396|ref|YP_002722655.1| putative peptidyl-tRNA hydrolase [Brachyspira hyodysenteriae WA1]
gi|225216217|gb|ACN84951.1| putative peptidyl-tRNA hydrolase [Brachyspira hyodysenteriae WA1]
Length = 297
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 104/166 (62%), Gaps = 8/166 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIH---SFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY NRHN+GF+ ID+I + +F KK +A E ++ IL+
Sbjct: 4 LIIGLGNPGDEYKNNRHNVGFILIDKIAQNFNINFDNNKKKSLYARSKEKDIE---YILL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-I 118
KPQTFMNLSG+S + + F+ + E+ +VI+DD+D+ FGT ++K GG GHNG+KS I
Sbjct: 61 KPQTFMNLSGESAIFISKFFNIK-PEDIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLI 119
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
S ++ R+RIGIGRP + +VL NFS ER L II N
Sbjct: 120 SHLQSDDFTRIRIGIGRPSAGKKVNDYVLSNFSKKEREELDTIIAN 165
>gi|296875515|ref|ZP_06899587.1| aminoacyl-tRNA hydrolase [Streptococcus parasanguinis ATCC 15912]
gi|322390529|ref|ZP_08064047.1| aminoacyl-tRNA hydrolase [Streptococcus parasanguinis ATCC 903]
gi|296433439|gb|EFH19214.1| aminoacyl-tRNA hydrolase [Streptococcus parasanguinis ATCC 15912]
gi|321142803|gb|EFX38263.1| aminoacyl-tRNA hydrolase [Streptococcus parasanguinis ATCC 903]
Length = 189
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 107/169 (63%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM +D++ S + + K F A+I+ L+G + +KP
Sbjct: 4 LIVGLGNPGDKYFETKHNVGFMLVDQMAKSLNLTFSHDKIFQADIASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIINH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R++IGIGRP ++ HVLG F + +L ID + ++
Sbjct: 123 IGTQTFYRIKIGIGRPKQGMSVVHHVLGKFDKDDYITILQTIDRVEEAV 171
>gi|288904229|ref|YP_003429450.1| peptidyl-tRNA hydrolase [Streptococcus gallolyticus UCN34]
gi|306832489|ref|ZP_07465641.1| aminoacyl-tRNA hydrolase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325977206|ref|YP_004286922.1| peptidyl-tRNA hydrolase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288730954|emb|CBI12498.1| peptidyl-tRNA hydrolase [Streptococcus gallolyticus UCN34]
gi|304425389|gb|EFM28509.1| aminoacyl-tRNA hydrolase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325177134|emb|CBZ47178.1| pth [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
Length = 189
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 109/177 (61%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E RHNIGFM IDR+ F+ + +K F AE+ ++G + L+KP
Sbjct: 4 MIVGLGNPGSKYHETRHNIGFMAIDRLAKDFNVTFSEEKNFKAEVGSCFINGEKVYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + ++E++LVI+DDLD++ G +RL+ G GHNG+KSI
Sbjct: 64 TTFMNNSGIAVHALLTYYNI-DIEDFLVIYDDLDMEVGRIRLRQKGSAGGHNGIKSIIAH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R+++GIGRP ++ HVLG F + + ++ + ++ + D
Sbjct: 123 TGTQAFDRIKVGIGRPKQGRSVVDHVLGKFDQDDYITVTNTLEKVNEAVQFYLQEAD 179
>gi|118444703|ref|YP_877115.1| peptidyl-tRNA hydrolase [Clostridium novyi NT]
gi|166199328|sp|A0PXL3|PTH_CLONN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118135159|gb|ABK62203.1| peptidyl-tRNA hydrolase [Clostridium novyi NT]
Length = 188
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 110/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG EY RHN+GF ID I + KKKF +G + + IL+K
Sbjct: 1 MFLIVGLGNPGKEYEHTRHNVGFDIIDVISEKYNIDLNKKKFKGMYGDGTIANEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ EV +FYK+P EN +VI+DD+ L+ G +R++ G GHNG+K+I
Sbjct: 61 PLTYMNLSGESIKEVTDFYKIPK-ENVIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G+P ++ HVLG F+ +R L + + + + + ++
Sbjct: 120 HFGSDVFPRIKVGVGQPVQR-DLVSHVLGKFNKDDREILSKVFEAASDAAENIIEKGTAE 178
Query: 180 FLN 182
+N
Sbjct: 179 AMN 181
>gi|119508860|ref|ZP_01628012.1| peptidyl-tRNA hydrolase [Nodularia spumigena CCY9414]
gi|119466389|gb|EAW47274.1| peptidyl-tRNA hydrolase [Nodularia spumigena CCY9414]
Length = 209
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 108/178 (60%), Gaps = 6/178 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTI-LIK 60
++ GLGNP +Y + RHNIGF ID + S+H +KF E EG G R I L+K
Sbjct: 15 LIVGLGNPEPKYDQTRHNIGFAAIDALSRSWHIPLGENRKFQGEYGEGIAPGSRKIRLLK 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MN SGQS+ V ++YKLP E+ LVI+DD+DL G RL+ G GHNG+KS IS
Sbjct: 75 PLTYMNRSGQSIQAVTSWYKLPP-ESVLVIYDDMDLPLGKTRLRLSGSAGGHNGMKSTIS 133
Query: 120 EKCGKNYKRLRIGIGRPPDT--AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+N+ RLRIGIG+P D+ + I HVLG FS+ E + ++ + + L K+
Sbjct: 134 HLNTQNFPRLRIGIGKPNDSDNSESISHVLGKFSAAETQLISVLLQFVVECVELSLKQ 191
>gi|322386427|ref|ZP_08060056.1| aminoacyl-tRNA hydrolase [Streptococcus cristatus ATCC 51100]
gi|321269513|gb|EFX52444.1| aminoacyl-tRNA hydrolase [Streptococcus cristatus ATCC 51100]
Length = 189
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 108/169 (63%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM +D++ + K F AEI+ L+G + +KP
Sbjct: 4 LIVGLGNPGDKYFETKHNVGFMLVDKMCKELNLKFTADKIFQAEIASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++++ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIDDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR++IGIGRP + +I HVLG F + +L +D + ++
Sbjct: 123 IGTQEFKRVKIGIGRPKNNMSVIHHVLGKFDQEDYISILNTLDRVDSAV 171
>gi|269124233|ref|YP_003306810.1| peptidyl-tRNA hydrolase [Streptobacillus moniliformis DSM 12112]
gi|268315559|gb|ACZ01933.1| peptidyl-tRNA hydrolase [Streptobacillus moniliformis DSM 12112]
Length = 365
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 116/189 (61%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG+EY +NRHNIGF+ +D+ + K+K+ + ++ + K
Sbjct: 1 MKLIVGLGNPGNEYEKNRHNIGFIYLDKYLKANNISNLKEKYKSLYTKELIKNETVFFQK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E+++F+K+ ++ LVI+DD+DL G +++K G AGHNG+ SI
Sbjct: 61 PQTYMNLSGEAIKELISFFKINPKKDLLVIYDDMDLKLGEVKIKNNGRSAGHNGINSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ + R+++GIG+P + + +I HVLGNF+ E L + +I + + D+
Sbjct: 121 HIGEEFIRIKVGIGKPNNKS-VISHVLGNFTEEENIILNKLDQHIFKIINAFISNNDIEK 179
Query: 181 LNHIVSVRK 189
L +++K
Sbjct: 180 LMSKYNIKK 188
>gi|163938059|ref|YP_001642943.1| peptidyl-tRNA hydrolase [Bacillus weihenstephanensis KBAB4]
gi|229131059|ref|ZP_04259972.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST196]
gi|163860256|gb|ABY41315.1| Aminoacyl-tRNA hydrolase [Bacillus weihenstephanensis KBAB4]
gi|228652396|gb|EEL08320.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST196]
Length = 207
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 108/167 (64%), Gaps = 2/167 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
+ ++R+R+GI RP + ++ +VLG F+S E + I+N A
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEISGVNQSIENAA 187
>gi|259047961|ref|ZP_05738362.1| aminoacyl-tRNA hydrolase [Granulicatella adiacens ATCC 49175]
gi|259035381|gb|EEW36636.1| aminoacyl-tRNA hydrolase [Granulicatella adiacens ATCC 49175]
Length = 203
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 99/156 (63%), Gaps = 2/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHN+GFM +D + F K F A ++GQ+ G + I +K
Sbjct: 18 MKLVVGLGNPGAKYKGTRHNVGFMTMDEVAYQEKFDFDKALFDAVFAQGQMGGEKVIFMK 77
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ +MN+YK+ +E+ LV++DD+DL G +RL+ G GHNG+KSI
Sbjct: 78 PLTFMNLSGEAIRPLMNYYKI-GIEDLLVVYDDMDLPVGKIRLRQKGSAGGHNGMKSIIS 136
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + + R+++G+GRP + ++ HVL F E
Sbjct: 137 CLGTSEFNRIKVGVGRPKEGRTVVGHVLNRFEKEEE 172
>gi|217965701|ref|YP_002351379.1| peptidyl-tRNA hydrolase [Listeria monocytogenes HCC23]
gi|254783874|sp|B8DGL2|PTH_LISMH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|217334971|gb|ACK40765.1| peptidyl-tRNA hydrolase [Listeria monocytogenes HCC23]
gi|307569752|emb|CAR82931.1| pth [Listeria monocytogenes L99]
Length = 186
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVIHYVLGDFPKAEQPDIIAAIQKSADAIEDYAQTPFIE 178
Query: 180 FLN 182
+N
Sbjct: 179 VMN 181
>gi|238019603|ref|ZP_04600029.1| hypothetical protein VEIDISOL_01472 [Veillonella dispar ATCC 17748]
gi|237863801|gb|EEP65091.1| hypothetical protein VEIDISOL_01472 [Veillonella dispar ATCC 17748]
Length = 192
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 95/153 (62%), Gaps = 2/153 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y +HNIGFM ID I WK++ AE+ +DG + +L+K
Sbjct: 1 MKLVVGLGNPGKQYEATKHNIGFMVIDAIADSVPHTPWKEEQRAEVCSITVDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +M +YK+ + Y I+DD+DL G LR++ G GHNG+KS+
Sbjct: 61 PQTFMNASGESVGPLMRYYKIDPSDVY-CIYDDMDLPVGKLRIRPNGSSGGHNGIKSLIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSS 152
G +N+ R R+GIGRP +I HVL FS
Sbjct: 120 HIGTENFPRFRVGIGRPLPQWTVIDHVLAPFSE 152
>gi|290894279|ref|ZP_06557246.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL J2-071]
gi|290556163|gb|EFD89710.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL J2-071]
Length = 186
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVIHYVLGDFPKTEQPDIIAAIQKSADAIEDYAQTPFIE 178
Query: 180 FLN 182
+N
Sbjct: 179 VMN 181
>gi|170755332|ref|YP_001783180.1| peptidyl-tRNA hydrolase [Clostridium botulinum B1 str. Okra]
gi|229470295|sp|B1IGZ7|PTH_CLOBK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169120544|gb|ACA44380.1| peptidyl-tRNA hydrolase [Clostridium botulinum B1 str. Okra]
Length = 189
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 108/169 (63%), Gaps = 4/169 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGN G EY + RHNIGF +D I + ++KF EG++ + IL+K
Sbjct: 1 MYLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NFYK+ EN +VI+DD+ +D G LR++ G GHNG+K+I +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDK-ENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
+ + R+R+GIG+P + +++ +VLG FS +R + ++ A++
Sbjct: 120 HLNSDIFPRVRVGIGQPDE--NVVNYVLGKFSKDQREIIDKVLAMSAKA 166
>gi|170759071|ref|YP_001788880.1| peptidyl-tRNA hydrolase [Clostridium botulinum A3 str. Loch Maree]
gi|238688504|sp|B1KTE2|PTH_CLOBM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169406060|gb|ACA54471.1| aminoacyl-tRNA hydrolase [Clostridium botulinum A3 str. Loch Maree]
Length = 189
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 108/169 (63%), Gaps = 4/169 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGN G EY + RHNIGF +D + + ++KF EG++ + IL+K
Sbjct: 1 MYLVVGLGNIGKEYKKTRHNIGFDVVDIVAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NFYK+ EN +VI+DD+ +D G LR++ G GHNG+K+I +
Sbjct: 61 PSTYMNLSGESVIEAANFYKIDK-ENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
+ + R+R+GIG+P + +++ +VLG FS +R + ++ A++
Sbjct: 120 HLNSDIFPRVRVGIGQPDE--NVVNYVLGKFSKDQREVIEKVLAMSAKA 166
>gi|229009561|ref|ZP_04166788.1| Peptidyl-tRNA hydrolase [Bacillus mycoides DSM 2048]
gi|229053898|ref|ZP_04195333.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH603]
gi|229165040|ref|ZP_04292836.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH621]
gi|228618425|gb|EEK75454.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH621]
gi|228721439|gb|EEL72959.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH603]
gi|228751705|gb|EEM01504.1| Peptidyl-tRNA hydrolase [Bacillus mycoides DSM 2048]
Length = 207
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 108/167 (64%), Gaps = 2/167 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
+ ++R+R+GI RP + ++ +VLG F+S E + I+N A
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGIKVVDYVLGRFTSEEISGVNQSIENAA 187
>gi|295694756|ref|YP_003587994.1| peptidyl-tRNA hydrolase [Bacillus tusciae DSM 2912]
gi|295410358|gb|ADG04850.1| peptidyl-tRNA hydrolase [Bacillus tusciae DSM 2912]
Length = 184
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 102/164 (62%), Gaps = 2/164 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y + RHN GFM IDR+ + + FH+ + ++ + +L+K
Sbjct: 1 MWLIAGLGNPGPQYAQTRHNAGFMVIDRLAARWSVSVTSRGFHSLTASTRVGEEQVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG ++ E + +Y+L E +V++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PQTFMNESGLAVGEAVRWYRL-GPERLIVVYDDLDLPLGKIRLRYKGSSGGHNGMKSILQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G + + R+RIGIGRP +I HVL FS E + P ++
Sbjct: 120 HLGTETFGRVRIGIGRPLKGRSVIDHVLSPFSPDELSTVRPALN 163
>gi|145222528|ref|YP_001133206.1| peptidyl-tRNA hydrolase [Mycobacterium gilvum PYR-GCK]
gi|315442976|ref|YP_004075855.1| peptidyl-tRNA hydrolase [Mycobacterium sp. Spyr1]
gi|189038156|sp|A4T6N5|PTH_MYCGI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145215014|gb|ABP44418.1| peptidyl-tRNA hydrolase [Mycobacterium gilvum PYR-GCK]
gi|315261279|gb|ADT98020.1| peptidyl-tRNA hydrolase [Mycobacterium sp. Spyr1]
Length = 192
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 105/173 (60%), Gaps = 5/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y RHNIGFM D + + +K KK AE++ G+L G +L K
Sbjct: 6 LVVGLGNPGPQYATTRHNIGFMVAD-VLADRMGETFKVHKKSGAEVTTGRLAGRPVVLAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ +MN SG+ + + FY + + ++IHD+LD+DFG +RLK GGG AGHNGL+S+
Sbjct: 65 PRVYMNESGRQVGPLAKFYSIAPT-DVVIIHDELDIDFGRIRLKAGGGVAGHNGLRSVGS 123
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
N ++R+R+GIGRPP VL F+S ER L II+ A + LL
Sbjct: 124 ALSTNDFQRVRVGIGRPPGQKSGASFVLEPFNSRERPELGTIIEQAADATELL 176
>gi|262281637|ref|ZP_06059406.1| peptidyl-tRNA hydrolase [Streptococcus sp. 2_1_36FAA]
gi|262262091|gb|EEY80788.1| peptidyl-tRNA hydrolase [Streptococcus sp. 2_1_36FAA]
Length = 189
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 108/169 (63%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM +D++ + K F +EI+ L+G + IKP
Sbjct: 4 LIVGLGNPGEKYFETKHNVGFMLVDKLCKDLNLKFTVDKIFQSEIASTFLNGEKVYFIKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L +E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGLE-VEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +++KR++IGIGRP + ++ HVLG F + +L +D + ++
Sbjct: 123 IGTQDFKRVKIGIGRPKEGMTVVHHVLGKFDRDDYITILNTLDKVDNAV 171
>gi|294496924|ref|YP_003560624.1| peptidyl-tRNA hydrolase [Bacillus megaterium QM B1551]
gi|294346861|gb|ADE67190.1| peptidyl-tRNA hydrolase [Bacillus megaterium QM B1551]
Length = 185
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 100/155 (64%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID+I K KF+ G + G + IL+K
Sbjct: 1 MKLIVGLGNPGKEYDRTRHNIGFMAIDKIAEQFMISLDKTKFNGIYGTGIIKGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M+++ + ++E+ LVI+DDLDL G +RL+T G GHNG+KSI +
Sbjct: 61 PLTYMNLSGESIRPLMDYFDI-DVEDLLVIYDDLDLPCGKVRLRTKGSPGGHNGIKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ + R+RIGI RP + ++ +VLG F+ E
Sbjct: 120 HLKTQEFNRIRIGIDRPKNGMKVVDYVLGRFTEDE 154
>gi|304315713|ref|YP_003850858.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777215|gb|ADL67774.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 190
Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 105/170 (61%), Gaps = 4/170 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNPG EY RHN+GF ID + K +F + I EG + IL K
Sbjct: 1 MYIIVGLGNPGREYEGTRHNMGFDVIDDLSEKLNIAVKKLRFKSLIGEGIYKEEKVILQK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ +++NFYKLP L N +V++DD DLD G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNSSGEAVYDIVNFYKLP-LSNLIVVYDDKDLDVGKIRIRKKGSSGGHNGMKSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+++ R+R+GIG+P +I HVLG F+ ++ + ID A ++
Sbjct: 120 LLNSEDFPRVRVGIGKP--KGDMIEHVLGRFNESDKTIVDNSIDRAADAI 167
>gi|284033575|ref|YP_003383506.1| peptidyl-tRNA hydrolase [Kribbella flavida DSM 17836]
gi|283812868|gb|ADB34707.1| peptidyl-tRNA hydrolase [Kribbella flavida DSM 17836]
Length = 191
Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 107/175 (61%), Gaps = 5/175 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTIL 58
+++V GLGNPG Y + RHN+G D + + WK K+ AE+ E ++ G RT+L
Sbjct: 5 VWLVVGLGNPGPTYAKTRHNVGQSVADEL-AGRVGGGWKQHKQARAEVIETRIGGARTVL 63
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
KP+++MN SG + ++ F+K+ + + +HD+LDLDF TLR+K GGGD GHNGL+SI
Sbjct: 64 AKPRSYMNESGGPVAGLLRFFKVEPAQ-LIAVHDELDLDFATLRVKFGGGDNGHNGLRSI 122
Query: 119 SEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ G +Y R+R G+GRPP + VL FS+ ER L +D A ++ L
Sbjct: 123 RKSVGTGDYHRVRFGVGRPPGRQNPADFVLNEFSAAERKDLPFALDRTADAVESL 177
>gi|16077121|ref|NP_387934.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
168]
gi|221307863|ref|ZP_03589710.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
168]
gi|221312185|ref|ZP_03593990.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221317118|ref|ZP_03598412.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321381|ref|ZP_03602675.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|321313723|ref|YP_004206010.1| peptidyl-tRNA hydrolase [Bacillus subtilis BSn5]
gi|586021|sp|P37470|PTH_BACSU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; AltName:
Full=Stage V sporulation protein C
gi|467442|dbj|BAA05288.1| stage V sporulation [Bacillus subtilis]
gi|2632320|emb|CAB11829.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
168]
gi|291482425|dbj|BAI83500.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. natto BEST195]
gi|320019997|gb|ADV94983.1| peptidyl-tRNA hydrolase [Bacillus subtilis BSn5]
Length = 188
Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 105/169 (62%), Gaps = 2/169 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y RHN+GFM ID++ + KF+ G + G + +L+K
Sbjct: 1 MLVIAGLGNPGKNYENTRHNVGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ L +M++Y + N E+ VI+DDLDL G +RL+T G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECLRPLMDYYDVDN-EDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
G + + R+RIGIGRP + ++ +VLG+F+ E + +D ++
Sbjct: 120 HLGTSEFDRIRIGIGRPVNGMKVVDYVLGSFTKEEAPEIEEAVDKSVKA 168
>gi|325295184|ref|YP_004281698.1| peptidyl-tRNA hydrolase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065632|gb|ADY73639.1| Peptidyl-tRNA hydrolase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 189
Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 110/187 (58%), Gaps = 7/187 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE-GQLDGLRTILIKP 61
++ GLGNPG +Y + RHN+G+M +DR+ K+KF +I+E DG + L+KP
Sbjct: 4 LIVGLGNPGKKYEKTRHNVGWMVLDRLAEVLGTDFSKEKFKGKIAELRNDDGKKIFLLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ E+ FYK+ E LVI+DDLDL G LRL+ G GH G+ SI E+
Sbjct: 64 ITYMNLSGESVGELAKFYKIKP-EETLVIYDDLDLPLGKLRLRLKGSSGGHKGVASI-EQ 121
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +N+ RLRIGIGRP ++ +VL F E L ID L + K+ D+
Sbjct: 122 CFGSQNFSRLRIGIGRPQTKEEVVNYVLSPFREDELEALGKAIDKAVSCLKEVIKKGDID 181
Query: 180 FLNHIVS 186
N I+S
Sbjct: 182 --NKIMS 186
>gi|78484739|ref|YP_390664.1| peptidyl-tRNA hydrolase [Thiomicrospira crunogena XCL-2]
gi|119391032|sp|Q31IN3|PTH_THICR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78363025|gb|ABB40990.1| peptidyl-tRNA hydrolase [Thiomicrospira crunogena XCL-2]
Length = 192
Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 107/186 (57%), Gaps = 7/186 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG +Y + RHN GF ++ R ++ F P + KF E + Q +GL L+
Sbjct: 6 LIVGLGNPGGQYEQTRHNAGFWFVEDVARQYNVQFRP--ETKFLGEAARIQSNGLDVWLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SGQS+ + FYK+ E LV+HD+LDLD G RLKT GG GHNGL+
Sbjct: 64 KPMTFMNRSGQSIQAIAKFYKIAP-EEILVVHDELDLDPGVARLKTSGGHGGHNGLRDTI 122
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G K++KRLR+GIG P D ++ +VL S +R + I + R LP L +
Sbjct: 123 AALGTKDFKRLRLGIGHPGDRNQVVDYVLKAPSKTDRALIDDAIYDATRVLPDLLNDDMA 182
Query: 179 SFLNHI 184
+N +
Sbjct: 183 RAMNEL 188
>gi|197302597|ref|ZP_03167652.1| hypothetical protein RUMLAC_01326 [Ruminococcus lactaris ATCC
29176]
gi|197298495|gb|EDY33040.1| hypothetical protein RUMLAC_01326 [Ruminococcus lactaris ATCC
29176]
Length = 192
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 109/184 (59%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNP EY RHN+GF IDR+ + KK A I +G + G + IL K
Sbjct: 1 MFIIAGLGNPTREYEGTRHNVGFDVIDRLAVRYNIDVDVKKHRALIGKGMIAGQKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
PQT+MNLSG+S+ ++++YK+ +VI+DD+ LD G LR++ G GHNG+K+ I+
Sbjct: 61 PQTYMNLSGESIRSILDYYKVDPETELIVIYDDISLDVGKLRIRAKGSAGGHNGIKNIIA 120
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+++G+G P + +VLG+FS E+ + ++ +++ ++ +
Sbjct: 121 HVGGPVFPRIKVGVGEKPPKYDLADYVLGHFSKAEQELMEEGYEDAVKAVEMIVSGDISG 180
Query: 180 FLNH 183
+N
Sbjct: 181 AMNE 184
>gi|220932953|ref|YP_002509861.1| Aminoacyl-tRNA hydrolase [Halothermothrix orenii H 168]
gi|219994263|gb|ACL70866.1| Aminoacyl-tRNA hydrolase [Halothermothrix orenii H 168]
Length = 187
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 111/178 (62%), Gaps = 5/178 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILI 59
M++V GLGNPG +Y E RHNIGF I+R+ H A KF A G + G + +L
Sbjct: 1 MYLVVGLGNPGDKYAETRHNIGFQVIERLARKHKIKAKNYPKFEALCGRGMIRGQKVMLA 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+P T+MN SG+++ +++++Y +L+N ++I+DDLDL G +R++ G GHNG+KSI
Sbjct: 61 QPLTYMNNSGRAVRKIIDYYDF-SLDNIIIIYDDLDLPPGKIRIRKKGSSGGHNGVKSII 119
Query: 120 EKC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
C + + R+RIGIGRPP +++ +VLG FSS + + ++D ++ + ++
Sbjct: 120 N-CLDTREFPRIRIGIGRPPAGVNVVDYVLGYFSSEDSEVMSDVLDTTVEAVETILEK 176
>gi|168187037|ref|ZP_02621672.1| peptidyl-tRNA hydrolase [Clostridium botulinum C str. Eklund]
gi|169295068|gb|EDS77201.1| peptidyl-tRNA hydrolase [Clostridium botulinum C str. Eklund]
Length = 190
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 99/152 (65%), Gaps = 3/152 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG EY RHN+GF +D I + KKKF G + G + IL+K
Sbjct: 1 MFLIVGLGNPGKEYEHTRHNVGFDIVDVISEKYNIDLNKKKFKGMYGSGIIAGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ E M+FYK+PN EN +VI+DD+ L+ G +R++ G GHNG+K+I
Sbjct: 61 PLTYMNLSGESVKEAMDFYKIPN-ENVIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFS 151
G + + R+++G+G+P ++ HVLG F+
Sbjct: 120 HFGSDVFPRIKVGVGQPIQK-DLVSHVLGKFN 150
>gi|325265260|ref|ZP_08131985.1| aminoacyl-tRNA hydrolase [Clostridium sp. D5]
gi|324029439|gb|EGB90729.1| aminoacyl-tRNA hydrolase [Clostridium sp. D5]
Length = 192
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 107/183 (58%), Gaps = 1/183 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNP +Y RHN+GF ID I S + KK A I +G + G + IL K
Sbjct: 1 MYIIAGLGNPDRQYEGTRHNVGFEVIDTIASKYNIAVDTKKHRAFIGKGVIGGQKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S++ ++ +YK+ + +VI+DD+ L G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESIISLVEYYKIDEEQELIVIYDDVSLGVGQLRIRAKGSAGGHNGIKNIIS 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+++G+G P + +VLG+F+ E + +N ++ ++ E +
Sbjct: 121 HLGSEVFPRIKVGVGEKPPKYDLADYVLGHFTKAEHELMEAGYENAVHAVEMIISGEIQA 180
Query: 180 FLN 182
+N
Sbjct: 181 AMN 183
>gi|291522022|emb|CBK80315.1| peptidyl-tRNA hydrolase [Coprococcus catus GD/7]
Length = 190
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 105/173 (60%), Gaps = 2/173 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP +Y RHN+GF IDRI + + +KK A G ++G + IL K
Sbjct: 1 MHLIVGLGNPTKQYEGTRHNVGFETIDRIAAENQIRVEEKKHKALYGSGYIEGEKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E+ ++YK+P EN +VI+DD+ LD G LR++ G GHNG+K+I
Sbjct: 61 PQTFMNLSGESVRELSDYYKIP-AENIIVIYDDISLDVGQLRIREKGSAGGHNGIKNIIL 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + R+++G+G P + +VLG +S+ +R + A ++ ++
Sbjct: 120 HLGTEVFPRIKVGVGEKPKGWDLADYVLGRYSAEDRKIIDEAQKEAAEAVKMM 172
>gi|153952327|ref|YP_001398643.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. doylei 269.97]
gi|166199321|sp|A7H563|PTH_CAMJD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|152939773|gb|ABS44514.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. doylei 269.97]
Length = 181
Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 112/189 (59%), Gaps = 10/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGN G EY RHN+GFM ID + +F KF E+ + G +L+
Sbjct: 1 MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFKGELFK---IGSSLLLL 57
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG S+ V +FYK E +VIHDD+D++ G LR K GG GHNGLKSI
Sbjct: 58 KPSTYMNNSGLSVKAVNDFYKC---ERMIVIHDDIDINLGALRFKKGGSSGGHNGLKSID 114
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG +Y+R+RIG+G+ + +I HVL F E L ++++ ++L L +++D+S
Sbjct: 115 ALCGNDYERVRIGVGKGEN---VISHVLDKFKPEEEITLSKVLEHTKKALLELIEKDDLS 171
Query: 180 FLNHIVSVR 188
++ S++
Sbjct: 172 AISSKYSLK 180
>gi|154173637|ref|YP_001408880.1| peptidyl-tRNA hydrolase [Campylobacter curvus 525.92]
gi|166199318|sp|A7H088|PTH_CAMC5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|112803759|gb|EAU01103.1| peptidyl-tRNA hydrolase [Campylobacter curvus 525.92]
Length = 181
Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 111/189 (58%), Gaps = 11/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP +Y RHNIGFM ID + + +F KF E+ + +L+K
Sbjct: 1 MTLIVGLGNPTSKYENTRHNIGFMLIDALKNSNFTDVSSSKFQGELFKYS----NLLLLK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG S+ V +FYK P E +VIHDDLDL FG ++ K GG GHNG++SI
Sbjct: 57 PTTFMNLSGNSVKAVNDFYK-P--ERIIVIHDDLDLPFGAMKFKKGGSSGGHNGIRSIDT 113
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+RIGIGR + A+ VLG FS E+ L I++ +++ L K D+
Sbjct: 114 LIGNDYERVRIGIGRSGNAANF---VLGEFSPEEKEHLAEILEYGTQAVNELIK-SDIES 169
Query: 181 LNHIVSVRK 189
+ +++K
Sbjct: 170 VAQKFTIKK 178
>gi|323350834|ref|ZP_08086493.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis VMC66]
gi|322123008|gb|EFX94711.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis VMC66]
Length = 189
Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 107/169 (63%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNP +Y E +HN+GFM +D+I K F A+I+ L+G + +KP
Sbjct: 4 LIVGLGNPREKYIETKHNVGFMLVDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR++IGIGRP + ++ HVLG F + +L +D + ++
Sbjct: 123 IGSQEFKRIKIGIGRPKEGVTVVHHVLGKFDKDDYMTILNTLDKVDNAV 171
>gi|310657788|ref|YP_003935509.1| peptidyl-tRNA hydrolase [Clostridium sticklandii DSM 519]
gi|308824566|emb|CBH20604.1| peptidyl-tRNA hydrolase [Clostridium sticklandii]
Length = 186
Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 110/180 (61%), Gaps = 3/180 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG +Y + RHN+GF+ +D + K KF + I EG + + +LIK
Sbjct: 1 MYLIVGLGNPGSKYEKTRHNVGFVTVDVLAGQLGIKVNKLKFKSLIGEGNIGSEKVVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++++ +NFYK P+ + VI+DD+DLD G LR++ G HNG+++I
Sbjct: 61 PQTYMNLSGEAVMQAINFYK-PDHDKIFVIYDDIDLDVGRLRIRKKGSGGTHNGMRNIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ R RIG+ +P + + V F+ E L IDN A ++ +LA +ED+
Sbjct: 120 LTGFDDFPRFRIGVSKPKNGQDLASFVTSGFNKDEIKPLCEAIDNAADAI-VLAIKEDID 178
>gi|262276843|ref|ZP_06054636.1| peptidyl-tRNA hydrolase [alpha proteobacterium HIMB114]
gi|262223946|gb|EEY74405.1| peptidyl-tRNA hydrolase [alpha proteobacterium HIMB114]
Length = 184
Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 111/172 (64%), Gaps = 4/172 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++AGLGNP +Y NRHN+GF +D + S +KKKF ++E ++D + +L+K
Sbjct: 1 MFLLAGLGNPDQKYQNNRHNVGFAFLDFLVSAE---NYKKKFKGLLAEEEIDNQKILLLK 57
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG SL E+ FYKL N EN VIHDDLDL+ G +++K GG GHNG++SISE
Sbjct: 58 PMTYMNLSGGSLFEIKKFYKLDN-ENIFVIHDDLDLEIGKIKVKNGGSSGGHNGIESISE 116
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G ++ R+R+GIG P + + +VL +F E + +I ++L L+
Sbjct: 117 YIGNDFNRIRVGIGHPGEKNLVENYVLNDFKKEEVKLIENSFASIKKNLQLV 168
>gi|42524124|ref|NP_969504.1| peptidyl-tRNA hydrolase [Bdellovibrio bacteriovorus HD100]
gi|68052963|sp|Q6MJR3|PTH_BDEBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|39576332|emb|CAE80497.1| pth [Bdellovibrio bacteriovorus HD100]
Length = 187
Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 100/156 (64%), Gaps = 3/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG EY RHNIGFM +D + P K +F AEI++ ++ I K
Sbjct: 1 MWLIVGLGNPGGEYKLTRHNIGFMAVDFLMEGLGNPPIKNQFKAEIAQAKIKDHPVIFCK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ +M FYK+P LE +VIHD++D F ++++ G GHNG+KSIS
Sbjct: 61 PQTYMNLSGESVQPLMGFYKIP-LERLIVIHDEIDQPFAQMKIQKNRGHGGHNGIKSISG 119
Query: 121 KCGK-NYKRLRIGIGRPPD-TAHIIRHVLGNFSSPE 154
G +Y RLR+G+GRP + + +VLG F+ E
Sbjct: 120 LMGSMDYTRLRLGVGRPANPNIPVPDYVLGKFTKEE 155
>gi|229917411|ref|YP_002886057.1| peptidyl-tRNA hydrolase [Exiguobacterium sp. AT1b]
gi|259535188|sp|C4KZU9|PTH_EXISA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|229468840|gb|ACQ70612.1| peptidyl-tRNA hydrolase [Exiguobacterium sp. AT1b]
Length = 185
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 112/183 (61%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG ++ RHN+GF+ IDR+ H + KF+A + G+++G R +L+K
Sbjct: 1 MKCIVGLGNPGKKFEMTRHNVGFLAIDRLAEKHGISLNEAKFNALMGTGRINGERVVLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ ++++YK+ +++ LVI+DDLD+ G LR + G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGEAVRPILDYYKI-EIDDLLVIYDDLDMVPGKLRFRPKGSAGGHNGIKSLIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +KRL++GIGRPP ++ VL N+ E L +DN + + ++
Sbjct: 120 HLGTAEFKRLKLGIGRPPHPIKVVDWVLMNYRKDELPELNETLDNAVTAATDFVDTDWLA 179
Query: 180 FLN 182
+N
Sbjct: 180 LMN 182
>gi|253700099|ref|YP_003021288.1| peptidyl-tRNA hydrolase [Geobacter sp. M21]
gi|259535194|sp|C6E501|PTH_GEOSM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|251774949|gb|ACT17530.1| peptidyl-tRNA hydrolase [Geobacter sp. M21]
Length = 188
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 110/173 (63%), Gaps = 3/173 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y RHN GFM +DR+ S +K F +G R L+KPQ
Sbjct: 5 LIVGLGNPGPKYSWTRHNAGFMVLDRLASISGIQVTRKAFSGLSGDGNWAAERVYLLKPQ 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S+ E + FYKL +L + +VIHDDLD+ FG ++LK GGG GHNGL+S++++
Sbjct: 65 TFMNLSGRSVAEALRFYKL-SLSDLIVIHDDLDIPFGKVKLKEGGGHGGHNGLRSLAQEL 123
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G + Y R+R+GIGRP ++ VL NF+ E LL ++D +L ++ K
Sbjct: 124 GSSAYARIRVGIGRPVH-GDVVNFVLANFAKEEMDSLLEVLDTSVDALEMMIK 175
>gi|121534877|ref|ZP_01666696.1| Aminoacyl-tRNA hydrolase [Thermosinus carboxydivorans Nor1]
gi|121306476|gb|EAX47399.1| Aminoacyl-tRNA hydrolase [Thermosinus carboxydivorans Nor1]
Length = 185
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 103/175 (58%), Gaps = 3/175 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN+GFM +D + W+++ AE++E + +L+K
Sbjct: 1 MKVIVGLGNPGREYSATRHNVGFMVVDELARRWGVSDWRRRHEAEVAEYR-GAEAVLLVK 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E+ +YKL E+ +V+ DDLDL G LRL+ G GH G++SI
Sbjct: 60 PQTYMNLSGRAVGEIARWYKLA-AEDIIVVFDDLDLPVGRLRLRMKGSSGGHRGIESILA 118
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ G + + R+R+GIGRPP +VL F+ E + I A ++ + K
Sbjct: 119 QLGADTFARVRVGIGRPPQGWATADYVLSKFTPDEAPLIEQAIVRAADAVETILK 173
>gi|157151158|ref|YP_001451366.1| peptidyl-tRNA hydrolase [Streptococcus gordonii str. Challis
substr. CH1]
gi|189038171|sp|A8B006|PTH_STRGC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157075952|gb|ABV10635.1| peptidyl-tRNA hydrolase [Streptococcus gordonii str. Challis
substr. CH1]
Length = 189
Score = 134 bits (336), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 108/169 (63%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM +D++ + K F +EI+ L+G + IKP
Sbjct: 4 LIVGLGNPGDKYFETKHNVGFMLVDKLCKDLNLKFTVDKIFQSEIASTFLNGEKIYFIKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L +E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGLE-VEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +++KR++IGIGRP + ++ HVLG F + +L +D + ++
Sbjct: 123 IGTQDFKRVKIGIGRPKEGMTVVHHVLGKFDRDDYITILNTLDKVDNAV 171
>gi|254832466|ref|ZP_05237121.1| peptidyl-tRNA hydrolase [Listeria monocytogenes 10403S]
Length = 186
Score = 134 bits (336), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GF+ +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFVVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVINYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLN 182
+N
Sbjct: 179 VMN 181
>gi|255017252|ref|ZP_05289378.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL F2-515]
Length = 186
Score = 134 bits (336), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GF+ +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFVVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KXEVINYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLN 182
+N
Sbjct: 179 VMN 181
>gi|295093546|emb|CBK82637.1| peptidyl-tRNA hydrolase [Coprococcus sp. ART55/1]
Length = 185
Score = 134 bits (336), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 106/183 (57%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+ GLGNPG +Y RHN+GF +D + H K A I +G +DG + IL
Sbjct: 1 MKIIVGLGNPGAKYAGTRHNVGFAVLDELAERHNIRIDTAKHKALIGKGIIDGEKVILAM 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ +M+FYK +E+ +V++DD+DLD G LR++ G GHNG+K+I +
Sbjct: 61 PQTFMNLSGESVRAIMDFYKCT-VEDLIVVYDDIDLDVGKLRIRQKGSAGGHNGMKNIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+G+G+ PD + +VL F + + N ++ + V+
Sbjct: 120 HVGSQEFVRIRVGVGKKPDHMDLADYVLSRFGKEDLANIRESCGNACDAVETILADGTVA 179
Query: 180 FLN 182
+N
Sbjct: 180 AMN 182
>gi|197119139|ref|YP_002139566.1| peptidyl-tRNA hydrolase [Geobacter bemidjiensis Bem]
gi|226694254|sp|B5EHX1|PTH_GEOBB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|197088499|gb|ACH39770.1| peptidyl-tRNA hydrolase [Geobacter bemidjiensis Bem]
Length = 188
Score = 134 bits (336), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 110/173 (63%), Gaps = 3/173 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y RHN GFM +DR+ S +K F +G R L+KPQ
Sbjct: 5 LIVGLGNPGPKYSWTRHNAGFMVLDRLASLSGIQVTRKAFSGLSGDGNWSSERVYLLKPQ 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S+ E + FYKL +L + +VIHDDLD+ FG ++LK GGG GHNGL+S++++
Sbjct: 65 TFMNLSGRSVAEALRFYKL-SLSDLIVIHDDLDIPFGKVKLKEGGGHGGHNGLRSLAQEL 123
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G + Y R+R+GIGRP ++ VL NF+ E LL ++D +L ++ K
Sbjct: 124 GSSAYARIRVGIGRPVH-GDVVNFVLTNFAKEEMDSLLEVLDTSVDALEMMIK 175
>gi|218895187|ref|YP_002443598.1| peptidyl-tRNA hydrolase [Bacillus cereus G9842]
gi|228963151|ref|ZP_04124321.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|218543107|gb|ACK95501.1| peptidyl-tRNA hydrolase [Bacillus cereus G9842]
gi|228796536|gb|EEM43974.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 207
Score = 134 bits (336), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS+
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSMIS 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 175
>gi|309389993|gb|ADO77873.1| peptidyl-tRNA hydrolase [Halanaerobium praevalens DSM 2228]
Length = 185
Score = 134 bits (336), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 108/184 (58%), Gaps = 5/184 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++AGLGNPG +Y + RHNIGFM I+ + F ++K F I + L + I+
Sbjct: 1 MKVIAGLGNPGQKYAQTRHNIGFMVINELAKRFKINSSYK--FDGLIGDFFLGSEKVIIF 58
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+P +MN SGQ + ++++++ + + EN LVIHDDLDLD G ++ K G GHNG+KSI
Sbjct: 59 QPLQYMNKSGQPIYKLLDYFNIES-ENLLVIHDDLDLDLGKIKFKQNGSSGGHNGIKSII 117
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G K +KRL+IGIGRPP+ + VL F S + + A ++ L+ K + +
Sbjct: 118 NNLGTKEFKRLKIGIGRPPENVPVPDFVLTTFKSESKKIAEQTVAKAASAVELMLKEDIM 177
Query: 179 SFLN 182
+N
Sbjct: 178 KAMN 181
>gi|228956493|ref|ZP_04118290.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228803183|gb|EEM50004.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 207
Score = 134 bits (336), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 175
>gi|326790210|ref|YP_004308031.1| peptidyl-tRNA hydrolase [Clostridium lentocellum DSM 5427]
gi|326540974|gb|ADZ82833.1| peptidyl-tRNA hydrolase [Clostridium lentocellum DSM 5427]
Length = 190
Score = 134 bits (336), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 96/161 (59%), Gaps = 2/161 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF ID + + K K+ A I E + G R IL+K
Sbjct: 1 MKLIVGLGNPGLQYAATRHNIGFEVIDSLAEAYNIQVTKSKYKALIGEANIKGERVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ M+F+K+ N E VI DD+ L+ G LRL+ G GHNG+KSI
Sbjct: 61 PQTYMNLSGEAVRACMDFHKITN-EEVFVIFDDVSLEVGQLRLRKNGSAGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLP 160
G +++ RL+ G+G P + +VLG FS + + P
Sbjct: 120 HIGTQDFSRLKFGVGEKPAGWDLANYVLGRFSEDDLKIIGP 160
>gi|229027898|ref|ZP_04184053.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1271]
gi|228733412|gb|EEL84239.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1271]
Length = 207
Score = 134 bits (336), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 175
>gi|206977947|ref|ZP_03238834.1| peptidyl-tRNA hydrolase [Bacillus cereus H3081.97]
gi|217957627|ref|YP_002336169.1| peptidyl-tRNA hydrolase [Bacillus cereus AH187]
gi|218901253|ref|YP_002449087.1| peptidyl-tRNA hydrolase [Bacillus cereus AH820]
gi|228912791|ref|ZP_04076439.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228925305|ref|ZP_04088402.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931554|ref|ZP_04094461.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228983307|ref|ZP_04143521.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229119714|ref|ZP_04248976.1| Peptidyl-tRNA hydrolase [Bacillus cereus 95/8201]
gi|229153830|ref|ZP_04281961.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 4342]
gi|229194442|ref|ZP_04321246.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1293]
gi|206743853|gb|EDZ55273.1| peptidyl-tRNA hydrolase [Bacillus cereus H3081.97]
gi|217064082|gb|ACJ78332.1| peptidyl-tRNA hydrolase [Bacillus cereus AH187]
gi|218535325|gb|ACK87723.1| peptidyl-tRNA hydrolase [Bacillus cereus AH820]
gi|228589032|gb|EEK47046.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1293]
gi|228629634|gb|EEK86330.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 4342]
gi|228663739|gb|EEL19317.1| Peptidyl-tRNA hydrolase [Bacillus cereus 95/8201]
gi|228776421|gb|EEM24773.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228828106|gb|EEM73833.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834352|gb|EEM79892.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228846851|gb|EEM91855.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|324324041|gb|ADY19301.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 207
Score = 133 bits (335), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 175
>gi|30018322|ref|NP_829953.1| peptidyl-tRNA hydrolase [Bacillus cereus ATCC 14579]
gi|75759613|ref|ZP_00739699.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|29893862|gb|AAP07154.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 14579]
gi|74492904|gb|EAO56034.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 210
Score = 133 bits (335), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 25 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 84
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 85 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 143
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 144 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 178
>gi|301051787|ref|YP_003789998.1| peptidyl-tRNA hydrolase [Bacillus anthracis CI]
gi|300373956|gb|ADK02860.1| peptidyl-tRNA hydrolase [Bacillus cereus biovar anthracis str. CI]
Length = 207
Score = 133 bits (335), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSKE 175
>gi|296131719|ref|YP_003638966.1| peptidyl-tRNA hydrolase [Thermincola sp. JR]
gi|296030297|gb|ADG81065.1| peptidyl-tRNA hydrolase [Thermincola potens JR]
Length = 187
Score = 133 bits (335), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGF+ ++++ K +F + EG + +L+K
Sbjct: 1 MKLIVGLGNPGKEYEFTRHNIGFLVLEQLAEKWGIAVNKNRFKSLFGEGIFQEDKIVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++L+ + FYKL + + LVI+DD+DL G LRL+ GG GH G++SI
Sbjct: 61 PQTFMNLSGQAVLDAVRFYKLEST-DILVIYDDMDLPTGRLRLRKSGGAGGHRGMESIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+N+ RLRIGIG+P ++HVLG F ER
Sbjct: 120 LLNTENFPRLRIGIGKPGPDKDAVQHVLGRFGEEER 155
>gi|42779130|ref|NP_976377.1| peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10987]
gi|42735045|gb|AAS38985.1| peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10987]
Length = 210
Score = 133 bits (335), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 25 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 84
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 85 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 143
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 144 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 178
>gi|294085759|ref|YP_003552519.1| aminoacyl-tRNA hydrolase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665334|gb|ADE40435.1| Aminoacyl-tRNA hydrolase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 215
Score = 133 bits (335), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 115/187 (61%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG EY RHN GFM +DRI H F WKKK + +SEG++ + IL+K
Sbjct: 1 MLVFVGLGNPGPEYAFQRHNAGFMAVDRIADQHGFSPWKKKHLSLMSEGRIGTEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ+FMN SG + E + FYK+ + + V HD+LDL +++K GGG GHNGL+ I
Sbjct: 61 PQSFMNKSGLPVAECIKFYKV-DPRSVFVFHDELDLGICRIKVKIGGGHGGHNGLRDIDR 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRH-VLGNFSSPERY-FLLPIIDNIARSLPLLAKREDV 178
G++Y R+RIGIGRPP A +R+ VL +FS E+ +L ++D IA L +D
Sbjct: 120 HLGQDYWRVRIGIGRPPVPAMDVRNWVLTDFSKDEQSGWLGRMLDAIADEAKRLVDGDDG 179
Query: 179 SFLNHIV 185
F++ +
Sbjct: 180 GFMSRVA 186
>gi|302388650|ref|YP_003824471.1| peptidyl-tRNA hydrolase [Thermosediminibacter oceani DSM 16646]
gi|302199278|gb|ADL06848.1| peptidyl-tRNA hydrolase [Thermosediminibacter oceani DSM 16646]
Length = 187
Score = 133 bits (335), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 102/164 (62%), Gaps = 4/164 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG EY E RHN+GFM +D + + K KF + EG +G + +L+K
Sbjct: 1 MFLIVGLGNPGREYEETRHNVGFMVLDSLAAELGIKVDKVKFKGLLGEGVYEGKKLLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQS++E + FYK+P EN +VI+DD+DL G LR++ G G G++SI
Sbjct: 61 PMTYMNNSGQSVVEAVKFYKIPP-ENLVVIYDDMDLPVGRLRVRGSGSSGGQKGMESIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+ + R+RIGIGRP +I HVLG F ER + +ID
Sbjct: 120 HIATEGFPRIRIGIGRP--KGDVINHVLGRFDKEERKKIDAVID 161
>gi|228937354|ref|ZP_04100001.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228970240|ref|ZP_04130900.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976810|ref|ZP_04137223.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis Bt407]
gi|228782906|gb|EEM31071.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis Bt407]
gi|228789475|gb|EEM37394.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228822312|gb|EEM68293.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326937843|gb|AEA13739.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 207
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 175
>gi|118475822|ref|YP_892973.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis str. Al Hakam]
gi|254682322|ref|ZP_05146183.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. CNEVA-9066]
gi|254735453|ref|ZP_05193161.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Western North
America USA6153]
gi|254744645|ref|ZP_05202324.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Kruger B]
gi|254756350|ref|ZP_05208379.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Vollum]
gi|254762406|ref|ZP_05214248.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Australia 94]
gi|118415047|gb|ABK83466.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis str. Al Hakam]
Length = 210
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 25 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLK 84
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 85 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 143
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 144 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 178
>gi|218232965|ref|YP_002364901.1| peptidyl-tRNA hydrolase [Bacillus cereus B4264]
gi|228898805|ref|ZP_04063088.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 4222]
gi|228905848|ref|ZP_04069746.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 200]
gi|228919002|ref|ZP_04082382.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228950600|ref|ZP_04112735.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229039957|ref|ZP_04189721.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH676]
gi|229067816|ref|ZP_04201134.1| Peptidyl-tRNA hydrolase [Bacillus cereus F65185]
gi|229077330|ref|ZP_04210007.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-2]
gi|229107738|ref|ZP_04237375.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-15]
gi|229125569|ref|ZP_04254602.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-Cer4]
gi|229142857|ref|ZP_04271300.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST24]
gi|229148461|ref|ZP_04276718.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1550]
gi|229176652|ref|ZP_04304057.1| Peptidyl-tRNA hydrolase [Bacillus cereus 172560W]
gi|229188337|ref|ZP_04315386.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10876]
gi|296500884|ref|YP_003662584.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis BMB171]
gi|218160922|gb|ACK60914.1| aminoacyl-tRNA hydrolase [Bacillus cereus B4264]
gi|228595136|gb|EEK52906.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10876]
gi|228606819|gb|EEK64235.1| Peptidyl-tRNA hydrolase [Bacillus cereus 172560W]
gi|228635003|gb|EEK91575.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1550]
gi|228640620|gb|EEK97007.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST24]
gi|228657886|gb|EEL13691.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-Cer4]
gi|228675711|gb|EEL30918.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-15]
gi|228705986|gb|EEL58297.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-2]
gi|228715300|gb|EEL67158.1| Peptidyl-tRNA hydrolase [Bacillus cereus F65185]
gi|228727365|gb|EEL78558.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH676]
gi|228809075|gb|EEM55559.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228840651|gb|EEM85912.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228853788|gb|EEM98547.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 200]
gi|228860830|gb|EEN05207.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 4222]
gi|296321936|gb|ADH04864.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis BMB171]
Length = 207
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 175
>gi|255321865|ref|ZP_05363015.1| peptidyl-tRNA hydrolase [Campylobacter showae RM3277]
gi|255300969|gb|EET80236.1| peptidyl-tRNA hydrolase [Campylobacter showae RM3277]
Length = 186
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 120/191 (62%), Gaps = 10/191 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY + RHN+GFM IDR+ + +F KF E+ + Q +L+K
Sbjct: 1 MILIVGLGNPGPEYSKTRHNVGFMLIDRLKNSNFTDVSSTKFQGELFKIQ----NLLLLK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ V++FYK P E +VIHDDLDL+FG ++ K GGG+ GHNGLKSI
Sbjct: 57 PTTFMNLSGRSVKAVVDFYK-P--ERVIVIHDDLDLNFGVVKFKKGGGNGGHNGLKSIDA 113
Query: 121 KCGKNYKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G +Y+R+RIGIGR + + HVLG F++ E+ L I+D +L L K D+
Sbjct: 114 LMGADYERVRIGIGRSAHKGESAVTGHVLGEFNAEEKEGLEKILDYCENALNELIKT-DI 172
Query: 179 SFLNHIVSVRK 189
++ S +K
Sbjct: 173 DAVSQKFSTKK 183
>gi|229015454|ref|ZP_04172455.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1273]
gi|229021659|ref|ZP_04178246.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1272]
gi|228739662|gb|EEL90071.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1272]
gi|228745838|gb|EEL95839.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1273]
Length = 190
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 5 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 65 PLTYMNLSGESIRPLMDYYKI-DVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 123
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 124 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 158
>gi|229824546|ref|ZP_04450615.1| hypothetical protein GCWU000282_01890 [Catonella morbi ATCC 51271]
gi|229785917|gb|EEP22031.1| hypothetical protein GCWU000282_01890 [Catonella morbi ATCC 51271]
Length = 186
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF ID + +KF A+ + ++ + +L+K
Sbjct: 1 MKLIVGLGNPGDKYQGTRHNVGFDVIDALARQEGLKLTDQKFRADYTIWRVGDEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++L +M++Y + + + +V++DDLDL+ G LRL+ G GHNG+KSI E
Sbjct: 61 PYTFMNLSGEAVLPLMSYYNI-SPDELVVVYDDLDLEPGKLRLRQSGSAGGHNGVKSIIE 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED-V 178
G +++KR++IGIGRP ++ HVL F + +R + ID L AK E V
Sbjct: 120 MLGTQDFKRVKIGIGRPQYGRKVVDHVLQRFDTDDRALIEQKIDQTTDLLRAWAKGETFV 179
Query: 179 SFLNH 183
+N
Sbjct: 180 QLMNQ 184
>gi|224373132|ref|YP_002607504.1| peptidyl-tRNA hydrolase [Nautilia profundicola AmH]
gi|223589122|gb|ACM92858.1| peptidyl-tRNA hydrolase [Nautilia profundicola AmH]
Length = 179
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 99/156 (63%), Gaps = 9/156 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTIL 58
M ++ GLGNPG +Y NRHNIGF+ ID + + F A K F E+ + +
Sbjct: 1 MKLIIGLGNPGEKYKLNRHNIGFLAIDYL--INEFNARKISSSFKGELFKAS----NYMF 54
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG+S + V N+YK+ N E+ +VIHDD+DL G L+ K GG GHNGLKS+
Sbjct: 55 LKPTTYMNLSGESAVLVKNYYKIDN-EDIVVIHDDIDLKLGALKFKRGGSHGGHNGLKSL 113
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ G +Y R+RIG+GRP ++++VL NF+ E
Sbjct: 114 DQHIGNDYYRVRIGVGRPERKDEVVKYVLSNFTDEE 149
>gi|304440476|ref|ZP_07400364.1| aminoacyl-tRNA hydrolase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371042|gb|EFM24660.1| aminoacyl-tRNA hydrolase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 190
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 102/164 (62%), Gaps = 2/164 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHNIGF+ IDR+ + KF + I E ++G + IL+K
Sbjct: 1 MFVIVGLGNPGSKYELTRHNIGFLTIDRLAKREGARVDRIKFKSLIGEININGEKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+++ EVMNFYK+ +L+N LV+ DD+D+ TLRLK G HNG+KSI
Sbjct: 61 PQTFMNLSGEAVREVMNFYKV-DLKNLLVVVDDIDITPFTLRLKKSGSAGSHNGMKSIIY 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+ + RL++G+G + +VL F ++ L IID
Sbjct: 120 NLNDDKFPRLKVGVGNNERKIDLANYVLSGFEKKDQEKLENIID 163
>gi|152973899|ref|YP_001373416.1| peptidyl-tRNA hydrolase [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|189038278|sp|A7GJW3|PTH_BACCN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|152022651|gb|ABS20421.1| Aminoacyl-tRNA hydrolase [Bacillus cytotoxicus NVH 391-98]
Length = 186
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 102/155 (65%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGMFGAGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ +LE++++++DDLDL G LRL+ G GHNG+KS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-DLEDFIIMYDDLDLPVGKLRLRMKGSAGGHNGVKSTIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + ++R+R+GI RP + ++ +VLG F++ E
Sbjct: 120 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTAEE 154
>gi|47569900|ref|ZP_00240567.1| peptidyl-tRNA hydrolase [Bacillus cereus G9241]
gi|52145164|ref|YP_081663.1| peptidyl-tRNA hydrolase [Bacillus cereus E33L]
gi|222093821|ref|YP_002527870.1| peptidyl-tRNA hydrolase [Bacillus cereus Q1]
gi|68052912|sp|Q63HI2|PTH_BACCZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783851|sp|B9IZD4|PTH_BACCQ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|47553434|gb|EAL11818.1| peptidyl-tRNA hydrolase [Bacillus cereus G9241]
gi|51978633|gb|AAU20183.1| aminoacyl-tRNA hydrolase (peptidyl-tRNA hydrolase);stage V
sporulation protein C [Bacillus cereus E33L]
gi|221237868|gb|ACM10578.1| aminoacyl-tRNA hydrolase (peptidyl-tRNA hydrolase);stage V
sporulation protein C [Bacillus cereus Q1]
Length = 186
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 120 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 154
>gi|242088699|ref|XP_002440182.1| hypothetical protein SORBIDRAFT_09g027420 [Sorghum bicolor]
gi|241945467|gb|EES18612.1| hypothetical protein SORBIDRAFT_09g027420 [Sorghum bicolor]
Length = 262
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 98/156 (62%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN+GF ID I K+F A + +G + + +L KP
Sbjct: 68 WLFVGLGNPGRMYKGTRHNVGFEMIDAIAEAEGISVSSKQFKAIVGKGLIGDVPVMLAKP 127
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFMN SG+S+ ++++++K+P L +VI+DDLDL F LRL GG GHNG++SI +
Sbjct: 128 QTFMNASGESVGQLVSYFKIP-LNQLVVIYDDLDLPFAKLRLLPKGGHGGHNGMRSIIDH 186
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K +N+ RLRIGIGRPP+ I VL +F+ E+
Sbjct: 187 LKQSRNFARLRIGIGRPPEEQGAISFVLQSFTVQEK 222
>gi|68052974|sp|Q73FF7|PTH_BACC1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 186
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 120 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 154
>gi|295106616|emb|CBL04159.1| peptidyl-tRNA hydrolase [Gordonibacter pamelaeae 7-10-1-b]
Length = 185
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 97/148 (65%), Gaps = 2/148 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG EY RHN GF +D I WK + + ++G + +L K
Sbjct: 1 MYLIVGLGNPGEEYAHTRHNAGFDAVDAIAGEVGARYWKTECGSLTAKGAYRDVDLVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ++MN SG + ++MN Y + + E+ +VIHD+LD+D GT+R+K GGG AGHNGL+SI +
Sbjct: 61 PQSYMNTSGGPVKQLMNAYGV-DAEHLIVIHDELDIDPGTVRVKFGGGHAGHNGLRSICD 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVL 147
K G +++ R+R+GIGRPP ++ VL
Sbjct: 120 KLGTRDWSRVRVGIGRPPGRMPVVDWVL 147
>gi|306834605|ref|ZP_07467717.1| aminoacyl-tRNA hydrolase [Streptococcus bovis ATCC 700338]
gi|304423241|gb|EFM26395.1| aminoacyl-tRNA hydrolase [Streptococcus bovis ATCC 700338]
Length = 189
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 109/177 (61%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E RHNIGFM IDR+ F+ + +K F AE+ ++G + L+KP
Sbjct: 4 MIVGLGNPGSKYHETRHNIGFMAIDRLAKVFNVTFSEEKNFKAEVGSCFVNGEKVYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + +++++LVI+DDLD++ G +RL+ G GHNG+KSI
Sbjct: 64 TTFMNNSGIAIHALLTYYNI-DIKDFLVIYDDLDMEVGRIRLRQKGSAGGHNGIKSIIAH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R+++GIGRP ++ HVLG F + + ++ + ++ + D
Sbjct: 123 TGTQAFDRIKVGIGRPKQGRSVVDHVLGKFDQDDYITVTNTLEKVNEAVQFYLQEAD 179
>gi|254829304|ref|ZP_05233991.1| pth [Listeria monocytogenes FSL N3-165]
gi|255027041|ref|ZP_05299027.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL J2-003]
gi|258601717|gb|EEW15042.1| pth [Listeria monocytogenes FSL N3-165]
Length = 186
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y + ++E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNI-SIEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVINYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLN 182
+N
Sbjct: 179 VMN 181
>gi|38372414|sp|Q81J96|PTH_BACCR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 186
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 120 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 154
>gi|65317511|ref|ZP_00390470.1| COG0193: Peptidyl-tRNA hydrolase [Bacillus anthracis str. A2012]
gi|165872550|ref|ZP_02217182.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0488]
gi|167635053|ref|ZP_02393370.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0442]
gi|167641506|ref|ZP_02399754.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0193]
gi|170688886|ref|ZP_02880088.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0465]
gi|170707529|ref|ZP_02897982.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0389]
gi|177655322|ref|ZP_02936851.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0174]
gi|190568956|ref|ZP_03021857.1| peptidyl-tRNA hydrolase [Bacillus anthracis Tsiankovskii-I]
gi|196036361|ref|ZP_03103758.1| peptidyl-tRNA hydrolase [Bacillus cereus W]
gi|196041774|ref|ZP_03109064.1| aminoacyl-tRNA hydrolase [Bacillus cereus NVH0597-99]
gi|196047390|ref|ZP_03114603.1| peptidyl-tRNA hydrolase [Bacillus cereus 03BB108]
gi|225862104|ref|YP_002747482.1| peptidyl-tRNA hydrolase [Bacillus cereus 03BB102]
gi|227812725|ref|YP_002812734.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. CDC 684]
gi|228943858|ref|ZP_04106244.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229089183|ref|ZP_04220465.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-42]
gi|229182446|ref|ZP_04309698.1| Peptidyl-tRNA hydrolase [Bacillus cereus BGSC 6E1]
gi|229602955|ref|YP_002864703.1| aminoacyl-tRNA hydrolase [Bacillus anthracis str. A0248]
gi|254724192|ref|ZP_05185977.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A1055]
gi|300119146|ref|ZP_07056847.1| peptidyl-tRNA hydrolase [Bacillus cereus SJ1]
gi|164711678|gb|EDR17223.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0488]
gi|167510491|gb|EDR85889.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0193]
gi|167529527|gb|EDR92277.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0442]
gi|170127525|gb|EDS96399.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0389]
gi|170667110|gb|EDT17871.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0465]
gi|172080163|gb|EDT65256.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0174]
gi|190559880|gb|EDV13864.1| peptidyl-tRNA hydrolase [Bacillus anthracis Tsiankovskii-I]
gi|195990991|gb|EDX54962.1| peptidyl-tRNA hydrolase [Bacillus cereus W]
gi|196021792|gb|EDX60486.1| peptidyl-tRNA hydrolase [Bacillus cereus 03BB108]
gi|196027394|gb|EDX66011.1| aminoacyl-tRNA hydrolase [Bacillus cereus NVH0597-99]
gi|225790416|gb|ACO30633.1| aminoacyl-tRNA hydrolase [Bacillus cereus 03BB102]
gi|227002837|gb|ACP12580.1| aminoacyl-tRNA hydrolase [Bacillus anthracis str. CDC 684]
gi|228601026|gb|EEK58594.1| Peptidyl-tRNA hydrolase [Bacillus cereus BGSC 6E1]
gi|228694146|gb|EEL47827.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-42]
gi|228815815|gb|EEM62050.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229267363|gb|ACQ49000.1| aminoacyl-tRNA hydrolase [Bacillus anthracis str. A0248]
gi|298723468|gb|EFI64209.1| peptidyl-tRNA hydrolase [Bacillus cereus SJ1]
Length = 207
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 175
>gi|229170902|ref|ZP_04298505.1| Peptidyl-tRNA hydrolase [Bacillus cereus MM3]
gi|228612568|gb|EEK69787.1| Peptidyl-tRNA hydrolase [Bacillus cereus MM3]
Length = 207
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGIFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 175
>gi|30260242|ref|NP_842619.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Ames]
gi|47525304|ref|YP_016653.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183085|ref|YP_026337.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Sterne]
gi|49481760|ref|YP_034404.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|38372419|sp|Q81VY9|PTH_BACAN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052958|sp|Q6HPW6|PTH_BACHK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|30253563|gb|AAP24105.1| aminoacyl-tRNA hydrolase [Bacillus anthracis str. Ames]
gi|47500452|gb|AAT29128.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. 'Ames Ancestor']
gi|49177012|gb|AAT52388.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Sterne]
gi|49333316|gb|AAT63962.1| aminoacyl-tRNA hydrolase (peptidyl-tRNA hydrolase);stage V
sporulation protein C [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 186
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 120 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 154
>gi|312792830|ref|YP_004025753.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312179970|gb|ADQ40140.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 189
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+AGLGNPG Y RHN GF+ ID + F K KF + + G + +L+KP
Sbjct: 3 YIIAGLGNPGERYTFTRHNAGFLAIDYLAQFFNTKVDKIKFKGLVGSFEYSGKKVLLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG S++E +NFYK+ E +VI+DD+ D G ++++ G D GHNG+KSI ++
Sbjct: 63 MTYMNASGDSIIEAVNFYKIKP-EKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQR 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + + R+RIGIG P ++++VL F E+ + I+ A + +L + +
Sbjct: 122 LGTEEFPRIRIGIGVPK--YDMVKYVLSEFEDGEKEKIFKAIEKAANGIKILLESDIDRA 179
Query: 181 LNHI 184
+N+I
Sbjct: 180 MNYI 183
>gi|224418391|ref|ZP_03656397.1| peptidyl-tRNA hydrolase [Helicobacter canadensis MIT 98-5491]
gi|253827709|ref|ZP_04870594.1| peptidyl-tRNA hydrolase [Helicobacter canadensis MIT 98-5491]
gi|313141922|ref|ZP_07804115.1| peptidyl-tRNA hydrolase [Helicobacter canadensis MIT 98-5491]
gi|253511115|gb|EES89774.1| peptidyl-tRNA hydrolase [Helicobacter canadensis MIT 98-5491]
gi|313130953|gb|EFR48570.1| peptidyl-tRNA hydrolase [Helicobacter canadensis MIT 98-5491]
Length = 190
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 101/151 (66%), Gaps = 8/151 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILI 59
MF++ GLGN G +Y NRHNIGF +D + +F + K F+ E+ + + +L+
Sbjct: 1 MFLIVGLGNIGEKYKNNRHNIGFCIVDSLIAFLNATKQSSKDFYGELYKAS----QILLL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG+S+L V NFYK+ + LVIHDDLDL FGT+R K GGG GHNGLKSI
Sbjct: 57 KPSTFMNLSGKSVLSVKNFYKIDKM---LVIHDDLDLPFGTVRFKFGGGSGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNF 150
E CGK Y RLR GIG+PP +I VLG+F
Sbjct: 114 ELCGKEYYRLRYGIGKPPLKNQVIDWVLGDF 144
>gi|118474844|ref|YP_891539.1| peptidyl-tRNA hydrolase [Campylobacter fetus subsp. fetus 82-40]
gi|261885631|ref|ZP_06009670.1| peptidyl-tRNA hydrolase [Campylobacter fetus subsp. venerealis str.
Azul-94]
gi|166199319|sp|A0RMV6|PTH_CAMFF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118414070|gb|ABK82490.1| peptidyl-tRNA hydrolase [Campylobacter fetus subsp. fetus 82-40]
Length = 181
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 108/181 (59%), Gaps = 12/181 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEI-SEGQLDGLRTIL 58
M +VAGLGN G EY RHN+GFM ID + F KF E+ +G L +L
Sbjct: 1 MTLVAGLGNIGKEYENTRHNVGFMLIDTMLKDGGFNSVSSGKFQGELFKKGSL-----LL 55
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP TFMNLSG SL V +FYK P +N +VIHDDLDL FGT+R K GG GHNG+KSI
Sbjct: 56 LKPSTFMNLSGNSLKAVNDFYK-P--DNIIVIHDDLDLPFGTVRFKRGGSSGGHNGIKSI 112
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G +Y R+RIGIGR ++ +I +VLG F E+ L ++ + ++ L D+
Sbjct: 113 DNLIGNDYDRVRIGIGRGNNS--VISYVLGEFIDDEKDRLKDVLAHCKNAVLELISCGDI 170
Query: 179 S 179
+
Sbjct: 171 T 171
>gi|317133015|ref|YP_004092329.1| peptidyl-tRNA hydrolase [Ethanoligenens harbinense YUAN-3]
gi|315470994|gb|ADU27598.1| peptidyl-tRNA hydrolase [Ethanoligenens harbinense YUAN-3]
Length = 208
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 108/183 (59%), Gaps = 3/183 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+IVAGLGNPG +Y RHN GF +D + + + + KF A GQ+ G R +L+KP
Sbjct: 23 WIVAGLGNPGIQYEGTRHNAGFAALDMLAAKNGVRIDRAKFKALCGIGQVAGKRVLLLKP 82
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+++ +FYKLP +E LV+ DD+ L G LR++ G GHNG+KSI +
Sbjct: 83 QTFMNLSGEAVAAAAHFYKLP-VERVLVLFDDISLPVGKLRVRRKGSAGGHNGIKSIIGE 141
Query: 122 CGKN-YKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG + + R++IG+G P + + VLG FS ER +D A ++ L + S
Sbjct: 142 CGSDGFPRVKIGVGDKPRPDYDLASWVLGKFSEAERPVFAQSLDRAAEAVEELIQNGVGS 201
Query: 180 FLN 182
+N
Sbjct: 202 AMN 204
>gi|295702291|ref|YP_003595366.1| peptidyl-tRNA hydrolase [Bacillus megaterium DSM 319]
gi|294799950|gb|ADF37016.1| peptidyl-tRNA hydrolase [Bacillus megaterium DSM 319]
Length = 185
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 100/155 (64%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID+I K KF+ G + G + IL+K
Sbjct: 1 MKLIVGLGNPGKEYDRTRHNIGFMAIDKIAEQFMISLDKTKFNGIYGTGIIKGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M+++ + ++++ LVI+DDLDL G +RL+T G GHNG+KSI +
Sbjct: 61 PLTYMNLSGESIRPLMDYFDI-DVKDLLVIYDDLDLPCGKVRLRTKGSPGGHNGIKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ + R+RIGI RP + ++ +VLG F+ E
Sbjct: 120 HLKTQEFNRIRIGIDRPKNGMKVVDYVLGRFTEDE 154
>gi|46579984|ref|YP_010792.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris str. Hildenborough]
gi|120602604|ref|YP_967004.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris DP4]
gi|68052972|sp|Q72BR1|PTH_DESVH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199329|sp|A1VDR1|PTH_DESVV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|46449400|gb|AAS96051.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris str. Hildenborough]
gi|120562833|gb|ABM28577.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris DP4]
gi|311234018|gb|ADP86872.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris RCH1]
Length = 201
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 110/199 (55%), Gaps = 17/199 (8%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---------HSFHFFPAWKKKF---HAEISEGQ 50
++ GLGNPG EY RHN GFM ID + KKK+ +I EGQ
Sbjct: 6 LIIGLGNPGREYDRTRHNFGFMFIDALLEEAQRNPFARCEQLSGGKKKYDLWRCDIVEGQ 65
Query: 51 LDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
L L KPQTFMNLSG+++L + +FY++ +V HD+LDL G +R K GGG+A
Sbjct: 66 APWL---LAKPQTFMNLSGEAVLAIASFYRV-KPAAMVVAHDELDLPLGRMRFKMGGGNA 121
Query: 111 GHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
GHNGLKSI++ G ++ RLR+GIG+PP VLG FS + + +++ + +
Sbjct: 122 GHNGLKSITQCLGTPDFHRLRLGIGKPPAGGETTGWVLGRFSQSDTAMVDAVLEAAIQGI 181
Query: 170 PLLAKREDVSFLNHIVSVR 188
A DV+ +I + R
Sbjct: 182 RTFATEGDVAATQYINAFR 200
>gi|255524038|ref|ZP_05391000.1| Aminoacyl-tRNA hydrolase [Clostridium carboxidivorans P7]
gi|296186895|ref|ZP_06855296.1| peptidyl-tRNA hydrolase [Clostridium carboxidivorans P7]
gi|255512325|gb|EET88603.1| Aminoacyl-tRNA hydrolase [Clostridium carboxidivorans P7]
gi|296048609|gb|EFG88042.1| peptidyl-tRNA hydrolase [Clostridium carboxidivorans P7]
Length = 187
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 103/164 (62%), Gaps = 4/164 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGN G +Y RHN+GF ID + + ++KF EG + + IL+K
Sbjct: 1 MFLIVGLGNIGKQYEHTRHNVGFDIIDLVSDKYNISINREKFKGMYGEGSIASEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ EV+NFYK+ N E +V++DD+ L+ G LR++ G GHNG+KSI
Sbjct: 61 PSTYMNLSGESIREVVNFYKISN-EQVIVLYDDISLEVGRLRIREKGSAGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G + + R+++G+G+P + ++ HVLG F+ +R ++ D
Sbjct: 120 NLGTDVFPRIKVGVGQPK--SELVSHVLGRFNVEDREKVIKAFD 161
>gi|293363961|ref|ZP_06610697.1| aminoacyl-tRNA hydrolase [Mycoplasma alligatoris A21JP2]
gi|292552451|gb|EFF41225.1| aminoacyl-tRNA hydrolase [Mycoplasma alligatoris A21JP2]
Length = 188
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 102/169 (60%), Gaps = 6/169 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y RHN GF+ ID+I K KF+ + + ++ K
Sbjct: 1 MRLIVGLGNPGDNYRHTRHNAGFLVIDKICRILKTDLNKSKFNGNFVKME----DLVIAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG + E+M+FYK+ N E+ LVI+D+ D + GT +K GG AGHNG+KSI +
Sbjct: 57 PMTYMNLSGNFIKEIMDFYKI-NPEDVLVIYDEKDYEIGTSSIKIGGSAAGHNGIKSIID 115
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
N +K+LRIGIG+P HI +VLGNFS E L PI+D A +
Sbjct: 116 ALKNNSFKKLRIGIGKPKTGYHIKDYVLGNFSVEEMTLLEPILDLAAEA 164
>gi|171778201|ref|ZP_02919430.1| hypothetical protein STRINF_00269 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283025|gb|EDT48449.1| hypothetical protein STRINF_00269 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 189
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E RHNIGFM IDR+ + + K F AE+ ++G + L+KP
Sbjct: 4 MIVGLGNPGSKYHETRHNIGFMAIDRLAEDLNVTFSEDKNFKAEVGSAFINGEKVYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + +E+++VI+DDLD++ G +RL+ G GHNG+KSI
Sbjct: 64 TTFMNNSGIAVHALLTYYNIA-IEDFMVIYDDLDMEVGRIRLRQKGSAGGHNGIKSIIAH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R+++GIGRP ++ HVLG F + + ++ + ++ + D
Sbjct: 123 TGTQAFDRIKVGIGRPKQGRSVVDHVLGKFDKDDYITVTNTLEKVNDAVQFYLQEAD 179
>gi|169335435|ref|ZP_02862628.1| hypothetical protein ANASTE_01849 [Anaerofustis stercorihominis DSM
17244]
gi|169258173|gb|EDS72139.1| hypothetical protein ANASTE_01849 [Anaerofustis stercorihominis DSM
17244]
Length = 186
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 106/167 (63%), Gaps = 7/167 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGN G EY RHNIGF +D I + K KF A+ +G+L G LIK
Sbjct: 1 MYLIVGLGNIGSEYNLTRHNIGFETVDYISDEYNIKINKTKFKADYGKGKLAGEEVFLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MNLSG+S+ +++K+P EN VI+DD++L G LR++ GG HNG+KSI +
Sbjct: 61 PRTYMNLSGESVKLFKDYFKIPE-ENIFVIYDDIELPKGKLRIRKNGGPGTHNGMKSIVK 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
+ G KN+ R R+G+G P+ ++ +VLG FS+ E LP+I ++
Sbjct: 120 EIGTKNFPRFRMGVG-SPEHGDLVNYVLGRFSAEE----LPVIKDMV 161
>gi|222475669|ref|YP_002564086.1| peptidyl-tRNA hydrolase (pth) [Anaplasma marginale str. Florida]
gi|254783848|sp|B9KHC6|PTH_ANAMF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|222419807|gb|ACM49830.1| peptidyl-tRNA hydrolase (pth) [Anaplasma marginale str. Florida]
Length = 186
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 94/150 (62%), Gaps = 2/150 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF+ D + FP + K+ A +S G + R +++K
Sbjct: 1 MLLLVGLGNPGKQYEFTRHNVGFVVADTVARDFDFPEFSSKYDALVSVGNVGLHRAMIVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++L+ + +K+P E V HDD DL G +++K GGG+AGHNGL+SI
Sbjct: 61 PATFMNRSGAAVLKAASMHKIP-AEQITVFHDDADLQHGVVKVKQGGGNAGHNGLRSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNF 150
G Y R+R+G+GR PD + HVL +F
Sbjct: 120 AIGCQYWRVRLGVGR-PDAGSLSGHVLSDF 148
>gi|296125816|ref|YP_003633068.1| peptidyl-tRNA hydrolase [Brachyspira murdochii DSM 12563]
gi|296017632|gb|ADG70869.1| peptidyl-tRNA hydrolase [Brachyspira murdochii DSM 12563]
Length = 205
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 108/172 (62%), Gaps = 9/172 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIH---SFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY NRHN+GF+ ID+I S +F KK + + G+ + IL+
Sbjct: 5 LIIGLGNPGDEYKNNRHNVGFILIDKIAENLSLNFDTNKKKSLY---TRGKSKDIEYILL 61
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-I 118
KPQTFMNLSG+S + + F+ + ++ +VI+DD+D+ FGT ++K GG GHNG+KS I
Sbjct: 62 KPQTFMNLSGESAIYISKFFNVKT-DDIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLI 120
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII-DNIARSL 169
++ ++ R+RIGIGRP + +VL NFS E L +I DN+ ++
Sbjct: 121 AQLHSDDFTRIRIGIGRPNAGKKVNDYVLSNFSKKEMEELNTVIADNVIEAV 172
>gi|269958305|ref|YP_003328092.1| peptidyl-tRNA hydrolase [Anaplasma centrale str. Israel]
gi|269848134|gb|ACZ48778.1| peptidyl-tRNA hydrolase [Anaplasma centrale str. Israel]
Length = 186
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 94/150 (62%), Gaps = 2/150 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF+ D + FP + K+ A +S G + R +++K
Sbjct: 1 MLLLVGLGNPGKQYEFTRHNVGFVVADTVARDFNFPEFSSKYDALVSVGNVGLHRAMIVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++L+ + +K+P E V HDD DL G +++K GGG+AGHNGL+SI
Sbjct: 61 PATFMNRSGAAVLKAASMHKIP-AEQITVFHDDADLQHGVVKVKQGGGNAGHNGLRSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNF 150
G Y R+R+G+GR PD + HVL +F
Sbjct: 120 AIGCQYWRVRLGVGR-PDAGSLSGHVLSDF 148
>gi|302871261|ref|YP_003839897.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor obsidiansis OB47]
gi|302574120|gb|ADL41911.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor obsidiansis OB47]
Length = 207
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 110/184 (59%), Gaps = 4/184 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+AGLGNPG Y RHN+GF+ ID + F K KF + + G + +L+KP
Sbjct: 21 YIIAGLGNPGDRYTFTRHNVGFLTIDYLAQFFNTKVDKIKFKGLVGSFEYAGKKVLLLKP 80
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S++E +NFYK+ E +VI+DD+ D G ++++ G D GHNG+KSI ++
Sbjct: 81 MTYMNASGESIIEAVNFYKIKP-EKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQR 139
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + + R+RIGIG P ++++VL F E+ + I+ + + +L + +
Sbjct: 140 LGTEEFPRIRIGIGVP--KYDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDRA 197
Query: 181 LNHI 184
+N+I
Sbjct: 198 MNYI 201
>gi|225028226|ref|ZP_03717418.1| hypothetical protein EUBHAL_02498 [Eubacterium hallii DSM 3353]
gi|224954538|gb|EEG35747.1| hypothetical protein EUBHAL_02498 [Eubacterium hallii DSM 3353]
Length = 717
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 110/184 (59%), Gaps = 3/184 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP +Y RHN+G+M IDRI + + KF A + G + G + +L+K
Sbjct: 522 MKVIVGLGNPTDQYKGTRHNVGYMAIDRIAEANRININQHKFKAMVGSGIIGGSKVLLVK 581
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M+FYKL +L + LVI+DD+ L+ G LRL+T G GHNG+KSI +
Sbjct: 582 PLTYMNLSGESIRPIMDFYKL-DLSDILVIYDDISLEPGMLRLRTKGSAGGHNGMKSIIK 640
Query: 121 KC-GKNYKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G + R+R+GIG + +VLG+F E+ L +D ++ L A+ E
Sbjct: 641 HLGGDTFPRIRVGIGGEKHPGQDLADYVLGHFKDDEKELLSDALDKAEKAAELFAQDEFS 700
Query: 179 SFLN 182
+N
Sbjct: 701 EAMN 704
>gi|284046683|ref|YP_003397023.1| peptidyl-tRNA hydrolase [Conexibacter woesei DSM 14684]
gi|283950904|gb|ADB53648.1| peptidyl-tRNA hydrolase [Conexibacter woesei DSM 14684]
Length = 203
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 100/160 (62%), Gaps = 9/160 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGL-----RT 56
++V GLGNPG +Y RHNIGF + + + P K+KF A +++G+ G R
Sbjct: 15 WLVVGLGNPGSQYAATRHNIGFEVANVLAARWQLPRAKRKFGALVTDGRTPGPTHPRPRV 74
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
++ PQT+MN SG+++ Y++P LE LV+HD++DL FG +R + GGG AGHNGLK
Sbjct: 75 AVLLPQTYMNESGRAVGPARGAYRVP-LERVLVLHDEIDLPFGDIRARIGGGLAGHNGLK 133
Query: 117 SISEKCGK-NYKRLRIGIGRPP--DTAHIIRHVLGNFSSP 153
S+ + G ++ R+RIG+ RPP D + +VLG FS P
Sbjct: 134 SLKRELGSPDFARVRIGVDRPPTTDPERVAGYVLGRFSEP 173
>gi|313888220|ref|ZP_07821894.1| aminoacyl-tRNA hydrolase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845910|gb|EFR33297.1| aminoacyl-tRNA hydrolase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 189
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG +Y + RHN+GF ID + K KF + EG++ + IL+K
Sbjct: 1 MYIIAGLGNPGKKYEDTRHNVGFSTIDVLADKLNIKVNKIKFKGLVGEGRIGNEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S++E++NFYKL E+ +VI DD+D++F L++K G HNGLKSI
Sbjct: 61 PHTFMNNSGESIVEILNFYKLK-PEDLMVIVDDIDIEFAQLKIKKNGSAGTHNGLKSIVN 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G K++ R +IG+G+ + VL NF S +R
Sbjct: 120 LTGSKDFARFKIGVGKKHPNEDLASFVLSNFPSKDR 155
>gi|56417305|ref|YP_154379.1| peptidyl-tRNA hydrolase [Anaplasma marginale str. St. Maries]
gi|255004785|ref|ZP_05279586.1| peptidyl-tRNA hydrolase [Anaplasma marginale str. Virginia]
gi|68052888|sp|Q5P9A6|PTH_ANAMM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56388537|gb|AAV87124.1| peptidyl-tRNA hydrolase [Anaplasma marginale str. St. Maries]
Length = 186
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 94/150 (62%), Gaps = 2/150 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF+ D + FP + K+ A +S G + R +++K
Sbjct: 1 MLLLVGLGNPGKQYEFTRHNVGFVVADTVARDFNFPEFSSKYDALVSVGNVGLHRAMIVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++L+ + +K+P E V HDD DL G +++K GGG+AGHNGL+SI
Sbjct: 61 PATFMNRSGAAVLKAASMHKIP-AEQITVFHDDADLQHGVVKVKQGGGNAGHNGLRSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNF 150
G Y R+R+G+GR PD + HVL +F
Sbjct: 120 AIGCQYWRVRLGVGR-PDVGSLSGHVLSDF 148
>gi|311070700|ref|YP_003975623.1| peptidyl-tRNA hydrolase [Bacillus atrophaeus 1942]
gi|310871217|gb|ADP34692.1| peptidyl-tRNA hydrolase [Bacillus atrophaeus 1942]
Length = 188
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 106/171 (61%), Gaps = 7/171 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y RHN+GFM ID++ + KF+ G + G + +L+K
Sbjct: 1 MLVLAGLGNPGKNYENTRHNVGFMTIDQLAKEWNIELNQTKFNGLYGTGFVSGQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ L +M++Y + N E VI+DDLDL G +RL+T G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECLRPLMDYYDVGN-EELKVIYDDLDLPAGKIRLRTKGSAGGHNGIKSLIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN-IARSL 169
G + + R+RIGIGRP + ++ +VLG F+ E P ID I++S+
Sbjct: 120 HLGTSEFDRIRIGIGRPVNGMKVVDYVLGAFTKEEA----PAIDEAISKSV 166
>gi|223038742|ref|ZP_03609035.1| peptidyl-tRNA hydrolase [Campylobacter rectus RM3267]
gi|222880144|gb|EEF15232.1| peptidyl-tRNA hydrolase [Campylobacter rectus RM3267]
Length = 186
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 119/191 (62%), Gaps = 10/191 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY + RHNIGFM IDR+ + +F KF E+ + Q +L+K
Sbjct: 1 MILIVGLGNPGPEYSKTRHNIGFMLIDRLKNSNFTDVSSAKFQGELFKFQ----NLLLLK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ V +FYK P E +VIHDDLDL+FG ++ K GGG+ GHNGLKSI
Sbjct: 57 PATFMNLSGRSVKAVADFYK-P--ERVIVIHDDLDLNFGVVKFKKGGGNGGHNGLKSIDA 113
Query: 121 KCGKNYKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G +Y+R+RIGIGR + + HVLG F++ E+ L I+ +L L K D+
Sbjct: 114 LIGADYERVRIGIGRSAHKGESAVTGHVLGEFNAEEKEGLEKILGYCEDALKELIKT-DI 172
Query: 179 SFLNHIVSVRK 189
++ SV+K
Sbjct: 173 DAVSQKFSVKK 183
>gi|254455414|ref|ZP_05068843.1| peptidyl-tRNA hydrolase [Candidatus Pelagibacter sp. HTCC7211]
gi|207082416|gb|EDZ59842.1| peptidyl-tRNA hydrolase [Candidatus Pelagibacter sp. HTCC7211]
Length = 186
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 102/176 (57%), Gaps = 1/176 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP + NRHN+GF ID I+ K KF ++ G + + IK
Sbjct: 1 MLLFVGLGNPTPDSENNRHNVGFKIIDSINKKFGLSKQKPKFKGLLTTGNVGDQKVYAIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + E++ ++K+ + E+ +V HDDLD++FG ++ K GG AGHNG+ SI +
Sbjct: 61 PLTFMNNSGICIRELIEYFKI-DAEDVIVFHDDLDVEFGKIKAKYGGSSAGHNGIASIDK 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
GK Y R+RIGIG+P + + VL NF E + I +NI S+ LL ++
Sbjct: 120 FIGKEYSRVRIGIGKPKENIKVGDFVLQNFDEDEMPGIEKISNNIIESISLLVDKK 175
>gi|312876094|ref|ZP_07736082.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor lactoaceticus 6A]
gi|311797080|gb|EFR13421.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor lactoaceticus 6A]
Length = 189
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 108/184 (58%), Gaps = 4/184 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+AGLGNPG Y RHN GF+ ID + F K KF + + G + +L+KP
Sbjct: 3 YIIAGLGNPGERYTFTRHNAGFLAIDYLAQFFNTKVDKIKFKGLVGSFEYSGKKVLLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG S++E +NFYK+ E +VI+DD+ D G ++++ G D GHNG+KSI ++
Sbjct: 63 MTYMNASGDSIIEAVNFYKIKP-EKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQR 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + + R+RIGIG P ++++VL F E+ + I+ A + +L + +
Sbjct: 122 LGTEEFPRIRIGIGIPKH--DMVKYVLSEFEDGEKEKIFKAIEKAANGIKILLESDIDRA 179
Query: 181 LNHI 184
+N+I
Sbjct: 180 MNYI 183
>gi|206972605|ref|ZP_03233548.1| peptidyl-tRNA hydrolase [Bacillus cereus AH1134]
gi|206732507|gb|EDZ49686.1| peptidyl-tRNA hydrolase [Bacillus cereus AH1134]
Length = 207
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 102/155 (65%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIL 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 175
>gi|229074113|ref|ZP_04207160.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-18]
gi|229094773|ref|ZP_04225779.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-29]
gi|229100842|ref|ZP_04231654.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-28]
gi|229113726|ref|ZP_04243162.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-3]
gi|228669723|gb|EEL25129.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-3]
gi|228682576|gb|EEL36641.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-28]
gi|228688641|gb|EEL42513.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-29]
gi|228709007|gb|EEL61133.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-18]
Length = 207
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++++++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVDDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F+S E
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEE 175
>gi|210623287|ref|ZP_03293704.1| hypothetical protein CLOHIR_01654 [Clostridium hiranonis DSM 13275]
gi|210153688|gb|EEA84694.1| hypothetical protein CLOHIR_01654 [Clostridium hiranonis DSM 13275]
Length = 186
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 93/137 (67%), Gaps = 2/137 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNPG +Y + RHN GF IDR+ + K K A I EG++ + +L+K
Sbjct: 1 MYIIVGLGNPGQKYAKTRHNAGFEVIDRLADEYGISVTKIKHKALIGEGRVGTEKVVLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++ + FYK P+L+ +VI+DD+DLD G LR++ G HNG++SI++
Sbjct: 61 PTTYMNLSGESVVSLYQFYK-PDLDKLIVIYDDIDLDVGKLRIRKKGSPGTHNGMRSITQ 119
Query: 121 KCG-KNYKRLRIGIGRP 136
G K++ R R+G+G+P
Sbjct: 120 CLGTKDFPRFRVGVGKP 136
>gi|163815684|ref|ZP_02207056.1| hypothetical protein COPEUT_01864 [Coprococcus eutactus ATCC 27759]
gi|158448989|gb|EDP25984.1| hypothetical protein COPEUT_01864 [Coprococcus eutactus ATCC 27759]
Length = 186
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 108/183 (59%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN GF ID + H K A I +G ++G + IL
Sbjct: 1 MKLIVGLGNPGAKYAGTRHNAGFSVIDELAERHNIKVDTCKHKALIGKGVINGEKVILAM 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ +M+FYKL +++ +V++DD+DLD G +R++ G GHNG+K+I
Sbjct: 61 PQTFMNLSGESVRAIMDFYKL-TVDDLIVVYDDIDLDVGKIRIREKGSAGGHNGMKNIIL 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ R+R+G+G+ P+ + HVL FS + F+ +L ++ V+
Sbjct: 120 HSGSQDFVRVRVGVGKKPEHMDLADHVLSRFSREDLPFMRESCGKACDALEVILSDGAVA 179
Query: 180 FLN 182
+N
Sbjct: 180 AMN 182
>gi|313893361|ref|ZP_07826935.1| aminoacyl-tRNA hydrolase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442130|gb|EFR60548.1| aminoacyl-tRNA hydrolase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 192
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + +HNIGFM +D I W+++ AE+ + G + +L+K
Sbjct: 1 MKLVVGLGNPGKQYEKTKHNIGFMVVDAIADSVPHTPWREEQRAEVCSITVAGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN+SG+S+ +M +YK+ + Y I+DD+DL G LR++ G GHNG+KS+
Sbjct: 61 PQTFMNVSGESVGPLMRYYKIDPSDVY-CIYDDMDLPVGKLRIRPNGSSGGHNGIKSLIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSS 152
G +N+ R R+GIGRP +I HVL FS
Sbjct: 120 HLGTENFPRFRVGIGRPLPQWTVIDHVLAPFSE 152
>gi|228989259|ref|ZP_04149252.1| Peptidyl-tRNA hydrolase [Bacillus pseudomycoides DSM 12442]
gi|229003057|ref|ZP_04160914.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock1-4]
gi|228758215|gb|EEM07403.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock1-4]
gi|228770469|gb|EEM19040.1| Peptidyl-tRNA hydrolase [Bacillus pseudomycoides DSM 12442]
Length = 186
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMGIDELAKRWGISLSEQKFKGMYGSGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F++ E
Sbjct: 120 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTAEE 154
>gi|253580890|ref|ZP_04858152.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847732|gb|EES75700.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 193
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 109/184 (59%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGNPG +Y RHN+GF +DR+ + P KF+A + + G + IL+K
Sbjct: 1 MYLVVGLGNPGKQYEATRHNMGFDTVDRLVEDYNVPQGGVKFNAMYGKTMIGGEKVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +FMNLSG + E+ N++K+ +VI+DD+DL+ G LR++ G GHNG+K I
Sbjct: 61 PLSFMNLSGGPVREMANYFKIDPESELIVIYDDIDLEPGQLRIRKQGSAGGHNGIKDIIR 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + + R+++G+G P + HVLG FS+ +R + I A+++ ++ + +
Sbjct: 121 QLGTEKFLRIKVGVGAKPKGWDLADHVLGRFSTEDRKLVDEAIAKAAKAVDIIISQGTDA 180
Query: 180 FLNH 183
+N
Sbjct: 181 AMNE 184
>gi|166031179|ref|ZP_02234008.1| hypothetical protein DORFOR_00865 [Dorea formicigenerans ATCC
27755]
gi|166029026|gb|EDR47783.1| hypothetical protein DORFOR_00865 [Dorea formicigenerans ATCC
27755]
Length = 203
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 100/151 (66%), Gaps = 1/151 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNP EY RHN+GF ID+I + KK A + +G ++G + +L+K
Sbjct: 10 MIIIAGLGNPTKEYEGTRHNVGFQVIDKIAEKYNIAVDAKKGRAYVGKGIIEGQKVLLVK 69
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E+++++K+ E LVI+DD+ L+ G +R++ G GHNG+K+I
Sbjct: 70 PQTYMNLSGESIRELVDYFKVDPKEELLVIYDDISLNPGQIRIRKKGSAGGHNGIKNIIA 129
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNF 150
+ G + ++R+++G+G P + +VLG+F
Sbjct: 130 QLGTDTFQRIKVGVGEKPKGYDLAAYVLGHF 160
>gi|317057761|ref|YP_004106228.1| peptidyl-tRNA hydrolase [Ruminococcus albus 7]
gi|315450030|gb|ADU23594.1| peptidyl-tRNA hydrolase [Ruminococcus albus 7]
Length = 208
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 108/175 (61%), Gaps = 3/175 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+ GLGNPG +Y RHN GF+ I+ + F + KF A++ + G +++KP
Sbjct: 23 YIIVGLGNPGIQYEGTRHNAGFITIEALEKKLGFSCDRHKFKAKVGNTVIGGKSCLVMKP 82
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+TFMNLSG ++ E M+FYK+P LEN +VI DD+ LD G +R++ G GHNG+KSI +
Sbjct: 83 ETFMNLSGDAVSEAMDFYKIP-LENVIVIFDDISLDVGHMRIRRKGSAGGHNGIKSIIAQ 141
Query: 122 C-GKNYKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
C G+++ R+++G+G+ P+ A+ + + VL F + L D +L L+ +
Sbjct: 142 CGGEDFPRIKLGVGKKPNPAYDLAKWVLSKFGDEDMEKLGNAADKACDALELMVQ 196
>gi|225387032|ref|ZP_03756796.1| hypothetical protein CLOSTASPAR_00782 [Clostridium asparagiforme
DSM 15981]
gi|225046850|gb|EEG57096.1| hypothetical protein CLOSTASPAR_00782 [Clostridium asparagiforme
DSM 15981]
Length = 212
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 108/183 (59%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNP EY + RHN+GF ID + F +KKF + + G + IL+K
Sbjct: 22 MYIIAGLGNPTKEYEKTRHNVGFEVIDVLADRLFTSVDEKKFKGYYGKAVIGGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ +FYK+ + ++ +V++DD+ LD G LR++T G GHNG+K+I
Sbjct: 82 PQTFMNLSGESVRAAADFYKV-DPDHIIVVYDDVSLDVGQLRIRTKGSAGGHNGIKNIIA 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G P + +VLG F ER + A ++ ++ + +
Sbjct: 141 HLGTQEFPRIKVGVGNKPPRMDLADYVLGRFPREERGLMEDAFKEAAEAVEVMIQEGAGT 200
Query: 180 FLN 182
+N
Sbjct: 201 AMN 203
>gi|282898618|ref|ZP_06306606.1| Peptidyl-tRNA hydrolase [Cylindrospermopsis raciborskii CS-505]
gi|281196486|gb|EFA71395.1| Peptidyl-tRNA hydrolase [Cylindrospermopsis raciborskii CS-505]
Length = 210
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 107/181 (59%), Gaps = 9/181 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTI-LIK 60
++ GLGNP +Y + RHNIGF ID I ++H +KF + EG G + I ++K
Sbjct: 15 LIVGLGNPEPKYDQTRHNIGFAAIDAISRNWHIAVTENRKFQGQFGEGLALGSKKIRILK 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MN SG+S+ V ++YKLP E+ LVI+DD+DL G +RL+ G GHNG+KS IS
Sbjct: 75 PLTYMNRSGESIQAVTSWYKLPP-ESVLVIYDDMDLPLGKIRLRLSGSAGGHNGMKSTIS 133
Query: 120 EKCGKNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+N+ RLRIGIG+P D + HVLG FS E + PI+ + + L K
Sbjct: 134 HLNSQNFPRLRIGIGKPKNLPNNDDGDTVSHVLGKFSPQEAKLIDPILAFVVECVELTLK 193
Query: 175 R 175
+
Sbjct: 194 Q 194
>gi|290579531|ref|YP_003483923.1| putative peptidyl-tRNA hydrolase [Streptococcus mutans NN2025]
gi|254996430|dbj|BAH87031.1| putative peptidyl-tRNA hydrolase [Streptococcus mutans NN2025]
Length = 189
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM +DRI + K F AE + ++G + IKP
Sbjct: 4 LIVGLGNPGSKYHETKHNVGFMALDRIVKPLNVQFTENKTFKAETAATFINGEKIYFIKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ + +Y L +E+ +VI+DDLD++ G +R + G GHNG+KSI ++
Sbjct: 64 ATFMNASGLAVRAFLAYYNLT-VEDLIVIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIKE 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R++IGIGRP D I+ +VLG F + + +D + +++
Sbjct: 123 IGTQEFDRIKIGIGRPKDKMTIVNYVLGKFDKEDEITIFNTLDKVDKAV 171
>gi|299820652|ref|ZP_07052541.1| aminoacyl-tRNA hydrolase [Listeria grayi DSM 20601]
gi|299817673|gb|EFI84908.1| aminoacyl-tRNA hydrolase [Listeria grayi DSM 20601]
Length = 184
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 112/184 (60%), Gaps = 5/184 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILI 59
M ++ GLGNPG +Y RHN+GFM +D + S+ + WKK K + ++ G + + +L+
Sbjct: 1 MKMIVGLGNPGMKYERTRHNVGFMVVDEL-SYRYQLPWKKVKQNGMVATGMIGSEKVLLV 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG + +M++Y + +E+ +VI+DDLDL G +RL+T G GHNG+KSI
Sbjct: 60 KPLTFMNESGLCVGPLMDYYDIA-VEDLIVIYDDLDLPVGKIRLRTKGSAGGHNGMKSII 118
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ + + R+R+G+ RP + +I HVLG FS E+ ++ I A ++ A+ V
Sbjct: 119 QHLKTQEFNRIRVGVDRPRN-GEVIHHVLGEFSKAEQPTIIEAIQTSADAVEAFAEHSFV 177
Query: 179 SFLN 182
+N
Sbjct: 178 EVMN 181
>gi|229159225|ref|ZP_04287250.1| Peptidyl-tRNA hydrolase [Bacillus cereus R309803]
gi|228624240|gb|EEK81041.1| Peptidyl-tRNA hydrolase [Bacillus cereus R309803]
Length = 186
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 102/155 (65%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VL F+S E
Sbjct: 120 HLGTQEFQRIRMGIDRPKNGMKVVDYVLARFTSEE 154
>gi|320547718|ref|ZP_08042003.1| aminoacyl-tRNA hydrolase [Streptococcus equinus ATCC 9812]
gi|320447793|gb|EFW88551.1| aminoacyl-tRNA hydrolase [Streptococcus equinus ATCC 9812]
Length = 189
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 105/177 (59%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E RHNIGFM IDR+ + + K F AE+ ++G + L+KP
Sbjct: 4 MIVGLGNPGSKYHETRHNIGFMAIDRLAKDLNVTFSEDKNFKAEVGSAFINGEKVYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + +E+++VI+DDLD++ G +RL+ G GHNG+KSI
Sbjct: 64 TTFMNNSGIAVHALLTYYNIA-IEDFMVIYDDLDMEVGRIRLRQKGSAGGHNGIKSIIAH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R+++GIGRP ++ HVLG F + + ++ + + + D
Sbjct: 123 AGTQAFDRIKVGIGRPKQGRSVVDHVLGKFDKDDYITVTNTLEKVNDVVQFYLQEAD 179
>gi|304405855|ref|ZP_07387513.1| peptidyl-tRNA hydrolase [Paenibacillus curdlanolyticus YK9]
gi|304345098|gb|EFM10934.1| peptidyl-tRNA hydrolase [Paenibacillus curdlanolyticus YK9]
Length = 186
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 100/165 (60%), Gaps = 2/165 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y RHN+GFM ID + + K A I EG + G + LIK
Sbjct: 1 MKWIVGLGNPGTKYQNTRHNVGFMAIDSLAKRWGISVTQSKCKALIGEGNVGGTKVALIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ M++YK+ LE+ +VI+DDLD + G +RL+ G GHNG+KSI +
Sbjct: 61 PMTYMNLSGETVRAYMDYYKVA-LEDLIVIYDDLDTEMGRIRLRYQGSPGGHNGIKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G + + R+R+GI RP +I +VL NF E+ L +I+
Sbjct: 120 HTGTQTFNRIRMGITRPLPGGNIADYVLDNFPKAEQDKLAIMIEQ 164
>gi|89100523|ref|ZP_01173384.1| peptidyl-tRNA hydrolase [Bacillus sp. NRRL B-14911]
gi|89084789|gb|EAR63929.1| peptidyl-tRNA hydrolase [Bacillus sp. NRRL B-14911]
Length = 187
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 101/167 (60%), Gaps = 2/167 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG EY + RHNIGF IDR+ P + KF G++DG + L+K
Sbjct: 1 MKLFVGLGNPGKEYEKTRHNIGFDVIDRLSGKLNIPLDQAKFKGVFGMGRVDGEKVFLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++Y + + E+ VI+DDLDL G +RL+ G GHNG+KS I+
Sbjct: 61 PLTYMNLSGESIRPLMDYYDI-DTEDLAVIYDDLDLPPGKIRLRQKGSAGGHNGIKSTIA 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
+ + R+R+GIGRP + +VLG F++ E+ + D A
Sbjct: 120 HTGTQEFSRIRVGIGRPEGGMKVTDYVLGRFTAEEQKVMDEAADRSA 166
>gi|303229597|ref|ZP_07316385.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-134-V-Col7a]
gi|303231900|ref|ZP_07318609.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-049-V-Sch6]
gi|302513429|gb|EFL55462.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-049-V-Sch6]
gi|302515722|gb|EFL57676.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-134-V-Col7a]
Length = 192
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y +HNIGFM ID I W+++ AE+ + G + +L+K
Sbjct: 1 MKLVVGLGNPGKQYEATKHNIGFMVIDAIADSVSHTPWREEQKAEVCSINVAGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +M +YK+ + Y I+DD+DL G LR++ G GHNG+KS+
Sbjct: 61 PQTFMNASGESVGPLMRYYKIDPSDVY-CIYDDMDLPVGKLRIRPNGSSGGHNGIKSLIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSS 152
G +N+ R R+GIGRP +I HVL FS
Sbjct: 120 HIGTENFPRFRVGIGRPLPQWTVIDHVLAPFSE 152
>gi|118579183|ref|YP_900433.1| peptidyl-tRNA hydrolase [Pelobacter propionicus DSM 2379]
gi|166229431|sp|A1AM05|PTH_PELPD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118501893|gb|ABK98375.1| peptidyl-tRNA hydrolase [Pelobacter propionicus DSM 2379]
Length = 193
Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 106/163 (65%), Gaps = 4/163 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG Y RHN GF+ +DR+ +K F E R IL+K
Sbjct: 3 MHIIAGLGNPGSHYQWTRHNAGFLFLDRLAHLENVSITRKSFSGLAGEWSRANCRHILLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+++ + FYKLP L +V+HDDLDL FGT+RLK GGG GHNGL+SI E
Sbjct: 63 PQTFMNLSGRSVMQALQFYKLP-LSQAIVVHDDLDLPFGTVRLKQGGGHGGHNGLRSIME 121
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
+ GK ++ RLR+GIGRP + +VLG+ PE+ LLP I
Sbjct: 122 QLGKGDFIRLRVGIGRPLH-GDTVNYVLGSM-PPEQMELLPRI 162
>gi|322420137|ref|YP_004199360.1| peptidyl-tRNA hydrolase [Geobacter sp. M18]
gi|320126524|gb|ADW14084.1| peptidyl-tRNA hydrolase [Geobacter sp. M18]
Length = 188
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 105/163 (64%), Gaps = 3/163 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y RHN GFM +DR+ +K F +G G R L+KPQ
Sbjct: 5 LIVGLGNPGPKYTWTRHNAGFMVLDRLAGQSGIAVTRKAFSGLSGDGNWAGERVYLLKPQ 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S+ E + FYKL +L + +VIHDDLD+ FG +RLK GGG GHNGL+S+ ++
Sbjct: 65 TFMNLSGRSVAEALRFYKL-SLSDLIVIHDDLDIPFGKVRLKEGGGHGGHNGLRSLGQEL 123
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G N + R+R+GIGRP ++ +VL NF+ E LL ++D
Sbjct: 124 GSNSFARVRVGIGRPMH-GDVVNYVLTNFAKEEMNELLEVLDT 165
>gi|302669663|ref|YP_003829623.1| peptidyl-tRNA hydrolase Pth [Butyrivibrio proteoclasticus B316]
gi|302394136|gb|ADL33041.1| peptidyl-tRNA hydrolase Pth [Butyrivibrio proteoclasticus B316]
Length = 226
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNP +Y RHN+GF ID + + + KF A +G++ R IL+K
Sbjct: 34 MYIIAGLGNPEKKYFGTRHNVGFATIDALSDKYGIELTETKFKAAFGKGRIGNDRVILVK 93
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + +++K+ + E +VI DD++LD G +R++ G GHNGLKSI
Sbjct: 94 PLTYMNLSGEAIRPICDYFKVDSKEELIVISDDVELDVGNIRVRPKGSAGGHNGLKSIIA 153
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + R+R+G+G+ P ++ VLG F + + ID ++ + S
Sbjct: 154 QLGHSEFNRVRVGVGKKPKEWDMVDWVLGTFQGEDAVSIKEGIDRAVAAVEEIMAAGVDS 213
Query: 180 FLNHIVSVRK 189
+N +++K
Sbjct: 214 AMNKYNTIKK 223
>gi|312897815|ref|ZP_07757231.1| peptidyl-tRNA hydrolase [Megasphaera micronuciformis F0359]
gi|310621199|gb|EFQ04743.1| peptidyl-tRNA hydrolase [Megasphaera micronuciformis F0359]
Length = 187
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++AGLGNPG EY ++HN GF ID + W+ + AE++ +DG + +L+KPQ
Sbjct: 1 MIAGLGNPGREYEGSKHNAGFTVIDELARRWGVNTWQTRMDAEVAIANVDGEQVLLVKPQ 60
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG+S+ +M +YK+ + Y V++DD+DL G LR++ G D GHNG+KS+
Sbjct: 61 TYMNDSGKSVGPLMRWYKIDEKDVY-VVYDDMDLPIGKLRIRENGSDGGHNGIKSLFANG 119
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERY 156
+++ R R+GIGRP +I HVL F PE Y
Sbjct: 120 CRDFVRFRLGIGRPLGHMDVIHHVLTPF--PEEY 151
>gi|228995442|ref|ZP_04155112.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock3-17]
gi|228764303|gb|EEM13180.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock3-17]
Length = 186
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 102/155 (65%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMGIDELAKRWGISLSEQKFKGMYGSGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ +E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-GVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+GI RP + ++ +VLG F++ E
Sbjct: 120 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTAEE 154
>gi|312144319|ref|YP_003995765.1| peptidyl-tRNA hydrolase [Halanaerobium sp. 'sapolanicus']
gi|311904970|gb|ADQ15411.1| peptidyl-tRNA hydrolase [Halanaerobium sp. 'sapolanicus']
Length = 185
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 103/183 (56%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHNIGFM + + KF + G + I+ +
Sbjct: 1 MKVIAGLGNPGEKYARTRHNIGFMITAELAK-KYSVNSSYKFDGLYGDYFFAGEKIIIFQ 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +MN SGQ + +++ +Y + LE+ LVIHDDLDLD G +R K G GHNG+KSI
Sbjct: 60 PMKYMNRSGQPIAKLLRYYDI-ELEDLLVIHDDLDLDLGKIRFKRNGSSGGHNGIKSIIN 118
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ K++KRL++G+GRPP + +VL F E+ +ID ++ L+ K + V
Sbjct: 119 RLDSKDFKRLKVGVGRPPGNIPVSDYVLTTFQGEEKKIASEVIDRSVSAVELMLKEDIVR 178
Query: 180 FLN 182
+N
Sbjct: 179 AMN 181
>gi|229825976|ref|ZP_04452045.1| hypothetical protein GCWU000182_01340 [Abiotrophia defectiva ATCC
49176]
gi|229789718|gb|EEP25832.1| hypothetical protein GCWU000182_01340 [Abiotrophia defectiva ATCC
49176]
Length = 192
Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 106/183 (57%), Gaps = 1/183 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNP +Y RHNIGF I + + K F +++ +G +DG + +L+K
Sbjct: 1 MYIIAGLGNPDRKYAGTRHNIGFDVITYLSDKYNISLSKTGFKSKLGQGFIDGEKVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E +NFYK+ ++I DD+DL+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNLSGEAVGEAVNFYKIDEKTELIIIQDDIDLEPGNIRIRVKGSAGGHNGIKSIIS 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + R+++G+G P+ + HVL F + +I+ ++ + K +
Sbjct: 121 HIGGNEFIRIKLGVGGKPEGGDLADHVLSGFDRDTEPLIRKVIELAGGAILTVMKEGAET 180
Query: 180 FLN 182
+N
Sbjct: 181 AMN 183
>gi|58743494|gb|AAW81735.1| Putative Putative Pepidyl-tRNA hydrolase family protein [Brassica
oleracea]
Length = 291
Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 97/156 (62%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D + F A +G + + +L KP
Sbjct: 98 WLIVGLGNPGKKYQGTRHNVGFEMVDALAEAEGISMNTVNFKALFGKGVIGNIPIMLAKP 157
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFMN SG+S+ ++++FYK+P L+ LVI+DDLDL FG LRL GG GHNG++SI +
Sbjct: 158 QTFMNASGESVGQIVSFYKIP-LKQVLVIYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 216
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K +++ RLRIGIGRPP +VL F+ E+
Sbjct: 217 LKGSRDFPRLRIGIGRPPGKMDTANYVLRQFNKQEQ 252
>gi|296329555|ref|ZP_06872041.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672752|ref|YP_003864423.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153298|gb|EFG94161.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305410995|gb|ADM36113.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 188
Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 103/164 (62%), Gaps = 6/164 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y RHN+GFM ID++ + KF+ G + G + +L+K
Sbjct: 1 MLVIAGLGNPGKNYENTRHNVGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ L +M++Y + N + VI+DDLDL G +RL+T G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECLRPLMDYYDVDN-GDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G + + R+RIGIGRP + ++ +VLG+F+ E +P ID
Sbjct: 120 HLGTSEFDRIRIGIGRPVNGMKVVDYVLGSFNKEE----VPDID 159
>gi|260584472|ref|ZP_05852219.1| aminoacyl-tRNA hydrolase [Granulicatella elegans ATCC 700633]
gi|260157990|gb|EEW93059.1| aminoacyl-tRNA hydrolase [Granulicatella elegans ATCC 700633]
Length = 186
Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 103/170 (60%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF+ +D + F A ++ +DG + IL+K
Sbjct: 1 MKLIIGLGNPGAKYKGTRHNIGFITVDEFAYQEKLEFNQALFDATFTQTHIDGEKVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSGQ++ +MN++K+ +E+ +V++DD+DL G +RL+ G GHNG+KSI
Sbjct: 61 PLTYMNLSGQAVRPLMNYFKI-GIEDIVVLYDDMDLPVGKIRLRQKGSAGGHNGIKSIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R++IG+GRP ++ HVL NF E+ +L + +L
Sbjct: 120 CLGSDQFNRIKIGVGRPAPGRSVVNHVLANFEKEEQEEILSSVSKSVEAL 169
>gi|229083370|ref|ZP_04215721.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-44]
gi|228699935|gb|EEL52569.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-44]
Length = 186
Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMGIDELAKRWGISLNEQKFKGMYGSGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ ++R+R+G+ RP + ++ +VLG F++ E
Sbjct: 120 HLGTQEFQRIRMGVDRPKNGMKVVDYVLGRFTAEE 154
>gi|269837229|ref|YP_003319457.1| peptidyl-tRNA hydrolase [Sphaerobacter thermophilus DSM 20745]
gi|269786492|gb|ACZ38635.1| peptidyl-tRNA hydrolase [Sphaerobacter thermophilus DSM 20745]
Length = 214
Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 99/162 (61%), Gaps = 3/162 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG Y RHNIGFM +D + + +F +E+ E + + R +L KP
Sbjct: 7 WLIVGLGNPGQRYAATRHNIGFMVVDHLARKLEPGTLRNQFDSELIETRDEPGRIVLQKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG ++ + +Y++P E L+I+DDLDL FG +RL+ GG AGH GL+S+ E
Sbjct: 67 QTYMNLSGIAVAQAARWYRVPT-ERILIIYDDLDLPFGRIRLRPGGSSAGHKGLQSVIEH 125
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
G + RLR+GIGRP + + +VL F S E L +I
Sbjct: 126 LGTDRVPRLRVGIGRPAHGSS-VSYVLSRFRSEEERVLPEVI 166
>gi|307705911|ref|ZP_07642749.1| peptidyl-tRNA hydrolase [Streptococcus mitis SK597]
gi|307620572|gb|EFN99670.1| peptidyl-tRNA hydrolase [Streptococcus mitis SK597]
Length = 189
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 106/169 (62%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+T G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRTKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + R++IGIGRP + ++ HVL F + +L ID + S+
Sbjct: 123 IGTQVFNRVKIGIGRPKNGMSVVNHVLSKFDKDDYIGILQSIDKVDDSV 171
>gi|158321664|ref|YP_001514171.1| peptidyl-tRNA hydrolase [Alkaliphilus oremlandii OhILAs]
gi|167011988|sp|A8MK43|PTH_ALKOO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|158141863|gb|ABW20175.1| Aminoacyl-tRNA hydrolase [Alkaliphilus oremlandii OhILAs]
Length = 185
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 107/175 (61%), Gaps = 3/175 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+ GLGNPG +Y RHNIGF ID + + K K A EG + G + +L+K
Sbjct: 1 MHIIVGLGNPGKKYDATRHNIGFEAIDMLAKRNNIEVKKLKHKALCGEGTIGGNKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQSLL+++ FYK+ + +N +V++DD+D+ GTLR++ G HNG+KSI
Sbjct: 61 PQTFMNLSGQSLLDIVQFYKV-DPKNIVVLYDDIDIPVGTLRIREKGSSGTHNGMKSIIY 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ + R+RIG+G+ P + +VLG F E +L ++ ++++ L K
Sbjct: 120 LLQTDQFPRIRIGVGK-PQFGDLADYVLGRFPKEEIPTMLETLERASQAVETLVK 173
>gi|30685853|ref|NP_173279.2| peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana]
gi|134035412|sp|Q8GW64|PTHC_ARATH RecName: Full=Peptidyl-tRNA hydrolase, chloroplastic; AltName:
Full=C-PTH; Flags: Precursor
gi|332191593|gb|AEE29714.1| Peptidyl-tRNA hydrolase [Arabidopsis thaliana]
Length = 288
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 97/156 (62%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D + F A +G + + +L KP
Sbjct: 95 WLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKP 154
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFMNLSG+S+ ++++FYK+P L+ LV++DDLDL FG LRL GG GHNG++SI +
Sbjct: 155 QTFMNLSGESVGQIVSFYKIP-LKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 213
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K +++ RLRIGIGRPP VL F+ E+
Sbjct: 214 LKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQ 249
>gi|114565645|ref|YP_752799.1| aminoacyl-tRNA hydrolase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|119391030|sp|Q0B0S6|PTH_SYNWW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|114336580|gb|ABI67428.1| peptidyl-tRNA hydrolase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 183
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 107/175 (61%), Gaps = 4/175 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF ++ + H + ++ A + +++ + +L+K
Sbjct: 1 MKMLVGLGNPGKKYSHTRHNIGFKVLEELARRHQIEKEESRYDAIVGHLRINQEKLLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + N++KL L LV++DD+DL GT+R++ GG GH G++SI E
Sbjct: 61 PLTFMNLSGKAVRPLFNWFKL-ELSELLVVYDDMDLPPGTVRIRASGGTGGHKGMQSICE 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G +++ R+RIGIGRPP A I VLG FS E+ + I+ A ++ K
Sbjct: 120 SLGSRDFPRIRIGIGRPPGGA--IDWVLGEFSESEKPLMQDAIEKAASAIECWVK 172
>gi|225016416|ref|ZP_03705608.1| hypothetical protein CLOSTMETH_00319 [Clostridium methylpentosum
DSM 5476]
gi|224950801|gb|EEG32010.1| hypothetical protein CLOSTMETH_00319 [Clostridium methylpentosum
DSM 5476]
Length = 209
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 105/173 (60%), Gaps = 3/173 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GF+ +D++ K KF + E + R +L+KP
Sbjct: 24 YLIVGLGNPGKEYEFTRHNAGFLALDQLAEKSGAAVKKIKFKSLTGEAVVGSRRCLLMKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG++++E MNFYK+P +EN LV++DD+ L+ G LR++ G D GHNG+KSI
Sbjct: 84 STYMNNSGEAVVEAMNFYKIP-IENVLVLYDDISLEPGKLRIRRKGSDGGHNGIKSIIYL 142
Query: 122 CGKN-YKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GK+ + R+++G+G+ PD + + + VL FS E + N + L+
Sbjct: 143 TGKDTFPRIKLGVGKKPDPRYDLAKWVLSAFSKEEFEAMEQAFSNAGEAAALI 195
>gi|189425649|ref|YP_001952826.1| peptidyl-tRNA hydrolase [Geobacter lovleyi SZ]
gi|238692128|sp|B3E6F9|PTH_GEOLS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189421908|gb|ACD96306.1| Aminoacyl-tRNA hydrolase [Geobacter lovleyi SZ]
Length = 193
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++AGLGNPG +Y RHN GF+ +DRI +K+F +E + G R +L+KPQ
Sbjct: 5 VIAGLGNPGSKYQWTRHNAGFLFLDRIAQLEGLSIVRKQFGGLTAEWERKGKRLVLLKPQ 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S++ + FYKL + +V+HD++DL G RLK GGG G NGL+SI E
Sbjct: 65 TFMNLSGRSVMPALQFYKLKP-DQLIVVHDEIDLALGAARLKQGGGHGGQNGLRSIMELL 123
Query: 123 GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
GK ++ RLR+GIGRPP + HVLG F+ PE ++D
Sbjct: 124 GKGDFVRLRLGIGRPPH-GDVTNHVLGVFTPPEMEIFARVLD 164
>gi|56751295|ref|YP_171996.1| peptidyl-tRNA hydrolase [Synechococcus elongatus PCC 6301]
gi|81299038|ref|YP_399246.1| peptidyl-tRNA hydrolase [Synechococcus elongatus PCC 7942]
gi|68052884|sp|Q5N2J4|PTH_SYNP6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391026|sp|Q31RR0|PTH_SYNE7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56686254|dbj|BAD79476.1| peptidyl-tRNA hydrolase [Synechococcus elongatus PCC 6301]
gi|81167919|gb|ABB56259.1| peptidyl-tRNA hydrolase [Synechococcus elongatus PCC 7942]
Length = 208
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 102/169 (60%), Gaps = 9/169 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTI-LIK 60
++ GLGNPG +Y E RHNIGFM IDR+ + + +KF E E + GL I L+K
Sbjct: 8 LLVGLGNPGQKYAETRHNIGFMLIDRLAQDWGVKLSEDRKFQGEYGETAVPGLGKIRLLK 67
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P TFMN SG+SL V+++YKL + LVI+DD+DL G LRL+ G HNG+KS IS
Sbjct: 68 PTTFMNQSGRSLRAVLDWYKL-TPQQILVIYDDMDLPLGRLRLRQSGSAGTHNGMKSIIS 126
Query: 120 EKCGKNYKRLRIGIGRPPDTAH-----IIRHVLGNFSSPERYFLLPIID 163
K++ RLR+GI P ++ + HVLG F+ E+ L ++D
Sbjct: 127 HLSSKDFPRLRLGISLPRSQSNDRHDATVSHVLGKFAVSEQSLLKQVLD 175
>gi|297844788|ref|XP_002890275.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336117|gb|EFH66534.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 130 bits (327), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 98/156 (62%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D + + F A +G + + ++ KP
Sbjct: 88 WLIVGLGNPGKKYQGTRHNVGFEMVDALANAEGISMNTVNFKALFGKGVIGNIPIMMAKP 147
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFMNLSG+S+ ++++FYK+P L+ LV++DDLDL FG LRL GG GHNG++SI +
Sbjct: 148 QTFMNLSGESVGQIVSFYKIP-LKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 206
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K +++ RLRIGIGRPP VL F+ E+
Sbjct: 207 LKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQ 242
>gi|251794073|ref|YP_003008804.1| peptidyl-tRNA hydrolase [Paenibacillus sp. JDR-2]
gi|247541699|gb|ACS98717.1| peptidyl-tRNA hydrolase [Paenibacillus sp. JDR-2]
Length = 186
Score = 130 bits (327), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 108/190 (56%), Gaps = 5/190 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y RHN+GFM ID + + K A I EG + G + +LIK
Sbjct: 1 MKWIVGLGNPGTTYQSTRHNVGFMVIDELARRWNIQVTQSKCKALIGEGNVQGTKVVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ M+++K +LE+ L+++DD+D + G +RL+ G GHNG+KS+ +
Sbjct: 61 PMTYMNLSGESVRGFMDYFK-ADLEDGLIVYDDMDTEVGKVRLRYQGSAGGHNGIKSLIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+G+ RP +I +VL NF E+ L +I+ ++ K S
Sbjct: 120 HLGTQQFNRIRMGVSRPQPGRNIADYVLDNFPKSEQEALKSMIEQACDAVEYSLK---AS 176
Query: 180 FLNHIVSVRK 189
F N + K
Sbjct: 177 FDNTMAKFNK 186
>gi|300087756|ref|YP_003758278.1| peptidyl-tRNA hydrolase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527489|gb|ADJ25957.1| peptidyl-tRNA hydrolase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 188
Score = 130 bits (327), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 96/158 (60%), Gaps = 5/158 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGF + R FH K+ + I EG++ IL K
Sbjct: 1 MKLIIGLGNPGKEYHHTRHNIGFEILGRFARFHNISFNKRSCQSRIGEGKIGDQPVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQ++ ++ YK+ ++ +VIHDDLDL G +R++ GG GHNG+KSI +
Sbjct: 61 PQTYMNLSGQAVAALIKRYKV-TPKDIIVIHDDLDLPIGKIRIRLEGGAGGHNGIKSIIQ 119
Query: 121 KCGK-NYKRLRIGIGRPPDTA---HIIRHVLGNFSSPE 154
G + R+++GIGRP T I+ HVL FS E
Sbjct: 120 SIGTICFTRIKVGIGRPTTTGDRIEIVDHVLTQFSQDE 157
>gi|15612631|ref|NP_240934.1| peptidyl-tRNA hydrolase [Bacillus halodurans C-125]
gi|14195082|sp|Q9KGJ3|PTH_BACHD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|10172680|dbj|BAB03787.1| stage V sporulation protein C (peptidyl-tRNA hydrolase) [Bacillus
halodurans C-125]
Length = 185
Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 106/183 (57%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF +D + + K + EG++DG + L+K
Sbjct: 1 MKLIVGLGNPGAKYDGTRHNVGFDVVDAVARRLNIEIKQSKANGLYGEGRIDGEKIFLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ + +Y + +E+ LVI+DDLDL G +RL+ G GHNG+KS+
Sbjct: 61 PQTFMNRSGESVRPFLEYYNM-EVEDLLVIYDDLDLPVGKIRLRQKGSAGGHNGMKSLIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++KR+R+G+ RP +++HVLG + E+ + ID A + K+ +
Sbjct: 120 HLGTSDFKRIRVGVDRPAPGETVVQHVLGRYRPEEKDAISEAIDLSAEAAEAFTKKPFLE 179
Query: 180 FLN 182
+N
Sbjct: 180 VMN 182
>gi|27469199|ref|NP_765836.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis ATCC 12228]
gi|57866046|ref|YP_187736.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis RP62A]
gi|251809808|ref|ZP_04824281.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875432|ref|ZP_06284304.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis SK135]
gi|293366144|ref|ZP_06612831.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|38257850|sp|Q8CQU9|PTH_STAES RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052877|sp|Q5HRQ3|PTH_STAEQ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|27316748|gb|AAO05923.1|AE016751_218 peptidyl-tRNA hydrolase [Staphylococcus epidermidis ATCC 12228]
gi|57636704|gb|AAW53492.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis RP62A]
gi|251806676|gb|EES59333.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis BCM-HMP0060]
gi|281295789|gb|EFA88311.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis SK135]
gi|291319738|gb|EFE60097.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329723936|gb|EGG60461.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis VCU144]
gi|329733015|gb|EGG69354.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis VCU028]
gi|329737896|gb|EGG74124.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis VCU045]
Length = 190
Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 107/170 (62%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF +D I H F K+KF + +L+G + + I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVVDDILERHQFTLDKQKFKGAYTIERLNGEKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSGQ++ +M++Y + ++E+ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGQAVAPLMDYYNV-DVEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR+RIG+GRP + + +VL FS E + +I++ AR++
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMSVPDYVLQKFSKEEMIIMEKVIEHSARAV 169
>gi|37520107|ref|NP_923484.1| peptidyl-tRNA hydrolase [Gloeobacter violaceus PCC 7421]
gi|46576719|sp|Q7NN75|PTH_GLOVI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|35211099|dbj|BAC88479.1| peptidyl-tRNA hydrolase [Gloeobacter violaceus PCC 7421]
Length = 198
Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 108/176 (61%), Gaps = 6/176 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW--KKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG +Y + RHN GF+ +D + + +W K +F ++EG G R IL+K
Sbjct: 5 LFVGLGNPGLQYTQTRHNAGFLAVDALAK-RWQCSWVEKSRFKGYLAEGAGPGGRAILLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQS+ V ++++LP + LV++D++ L G +RL+ G AGHNG+KS+ E
Sbjct: 64 PTTYMNHSGQSVRAVADYFRLPP-QQLLVLYDEVALPLGKIRLRPEGSAAGHNGIKSLIE 122
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL-PLLAK 174
G N + RLRIGIGR P + +VLG F+ E+ L I+D ++ +LAK
Sbjct: 123 HLGTNQFARLRIGIGREPPPPVLTNYVLGKFAPEEQEQLPAILDGCVEAVEAVLAK 178
>gi|221632813|ref|YP_002522035.1| peptidyl-tRNA hydrolase [Thermomicrobium roseum DSM 5159]
gi|221157249|gb|ACM06376.1| peptidyl-tRNA hydrolase [Thermomicrobium roseum DSM 5159]
Length = 239
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG EY E RHNIGF IDR+ ++++F E + + D +L+KP
Sbjct: 43 WLVVGLGNPGSEYMETRHNIGFWVIDRVAQLTNVVGFQRRFEGEFATVRTDRGLLLLLKP 102
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ + +YKL +L+ LV+HDD+DL GTLR + GG AGH+G++S++ +
Sbjct: 103 LTFMNRSGVAVAAAVRWYKL-SLDRTLVVHDDMDLPLGTLRFRQGGSAAGHHGVESVTRE 161
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G N + RLRIGIGRP VL F ER
Sbjct: 162 LGSNGFGRLRIGIGRPTRREEGRDFVLSPFHPEER 196
>gi|331090627|ref|ZP_08339478.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401067|gb|EGG80662.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 190
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 107/184 (58%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNP +Y RHN+GF ID I + +K A +G + G + IL K
Sbjct: 1 MYIIVGLGNPTSQYEGTRHNVGFDVIDAIADKYNITMDIRKHRAFCGKGIIAGQKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ +++++K+ + +VI+DD+ LD G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESVRSLVDYFKIDEEQELIVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G P + +VLG+FS ER + N +++ L+ E +
Sbjct: 121 HLGHSVFPRIKVGVGEKPKQYDLADYVLGHFSKAEREVMEDGYQNAVKAIELMVNDEIET 180
Query: 180 FLNH 183
+N
Sbjct: 181 AMNE 184
>gi|257452981|ref|ZP_05618280.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 3_1_5R]
gi|257466639|ref|ZP_05630950.1| peptidyl-tRNA hydrolase [Fusobacterium gonidiaformans ATCC 25563]
gi|315917793|ref|ZP_07914033.1| peptidyl-tRNA hydrolase [Fusobacterium gonidiaformans ATCC 25563]
gi|317059521|ref|ZP_07924006.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 3_1_5R]
gi|313685197|gb|EFS22032.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 3_1_5R]
gi|313691668|gb|EFS28503.1| peptidyl-tRNA hydrolase [Fusobacterium gonidiaformans ATCC 25563]
Length = 186
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 92/153 (60%), Gaps = 2/153 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHN+GFM ID H K+KF +++ E G + IK
Sbjct: 1 MKLVVGLGNPGKKYEKTRHNVGFMAIDLFLKKHSILGEKEKFLSKVVETNFQGEKVYFIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG ++ EV+ FYK+ + LV++DD DL G LR K G GHNG+KSI
Sbjct: 61 PQTYMNLSGNAIHEVVQFYKIDPVSEILVVYDDKDLPLGKLRYKVKGSSGGHNGMKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSP 153
G+ + RL+ GIG + ++I V+G+F
Sbjct: 121 HIGQEFCRLKCGIGST--SGNVIDFVIGDFQKA 151
>gi|242241587|ref|ZP_04796032.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis W23144]
gi|242234968|gb|EES37279.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis W23144]
Length = 190
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 107/170 (62%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF +D I H F K+KF + +L+G + I I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVVDDILERHQFTLDKQKFKGAYTIERLNGEKVIFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSGQ++ +M++Y + ++E+ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGQAVAPLMDYYNV-DVEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR+RIG+GRP + + +VL FS E + +I++ A+++
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMSVPDYVLQKFSKEEMIIMEKVIEHSAKAV 169
>gi|86605936|ref|YP_474699.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-3-3Ab]
gi|119391024|sp|Q2JV16|PTH_SYNJA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86554478|gb|ABC99436.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-3-3Ab]
Length = 225
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 104/168 (61%), Gaps = 7/168 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GFM +D++ P A +K+F EG G + L+KP
Sbjct: 16 LIVGLGNPGPQYANTRHNCGFMVVDQLAERWGIPLALEKRFQGSYGEGFALGGKRRLLKP 75
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+T+MN SG+++ V+++YKL + + LV++DD+DL G LRL+ G GHNG+KS+ E
Sbjct: 76 ETYMNRSGEAVRAVLDWYKL-DPASVLVVYDDMDLPLGRLRLRGSGSAGGHNGMKSVIEH 134
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
G + + RLR+G+GRP + HVLG+F E+ ++D + R+
Sbjct: 135 LGSEAFPRLRLGVGRPKGNQDRVGHVLGSFEPAEQA----VLDRVLRA 178
>gi|312128224|ref|YP_003993098.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor hydrothermalis 108]
gi|311778243|gb|ADQ07729.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor hydrothermalis 108]
Length = 189
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 109/184 (59%), Gaps = 4/184 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+AGLGNPG +Y RHN GF+ ID + K KF + + G + +L+KP
Sbjct: 3 YIIAGLGNPGEKYTFTRHNAGFLAIDYLAQLFNTKVDKIKFKGLVGSFEYAGKKVLLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S++E +NFYK+ E +VI+DD+ D G ++++ G D GHNG+KSI ++
Sbjct: 63 MTYMNASGESIIEAVNFYKIKP-EKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQR 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + + R+RIGIG P ++++VL F E+ + I+ + + +L + +
Sbjct: 122 LGTEEFPRIRIGIGVPK--YDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDMDRA 179
Query: 181 LNHI 184
+N+I
Sbjct: 180 MNYI 183
>gi|222099806|ref|YP_002534374.1| Peptidyl-tRNA hydrolase [Thermotoga neapolitana DSM 4359]
gi|254783895|sp|B9K7S5|PTH_THENN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|221572196|gb|ACM23008.1| Peptidyl-tRNA hydrolase [Thermotoga neapolitana DSM 4359]
Length = 186
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 99/153 (64%), Gaps = 6/153 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+V GLGNPG Y RHN+GF+ +D + S WK + E ++ +LDG +L+KP
Sbjct: 2 VVVGLGNPGPRYAFTRHNVGFLFLDYLKS----KGWKSEKFFEWNKTELDGHEIVLVKPL 57
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG ++ +M F+++ N+++ +V++DD+ L G +R++ G D GHNG+KSI +
Sbjct: 58 TYMNLSGVAMPYIMRFFRV-NVDDIIVVYDDVSLKLGKIRIRKKGSDGGHNGMKSIIQAL 116
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + KR+RIGIG P+ +++ VLG FS E
Sbjct: 117 GTQEIKRIRIGIGEKPEGMNLVDFVLGEFSEEE 149
>gi|24378537|ref|NP_720492.1| peptidyl-tRNA hydrolase [Streptococcus mutans UA159]
gi|46576815|sp|Q8DWN5|PTH_STRMU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|24376385|gb|AAN57798.1|AE014853_5 putative peptidyl-tRNA hydrolase [Streptococcus mutans UA159]
Length = 189
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM +DRI + K F AE ++G + IKP
Sbjct: 4 LIVGLGNPGSKYHETKHNVGFMALDRIVKPLNVQFTENKTFKAETVATFINGEKIYFIKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ + +Y L +E+ +VI+DDLD++ G +R + G GHNG+KSI ++
Sbjct: 64 TTFMNASGLAVRAFLAYYNLT-VEDLIVIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIKE 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R++IGIGRP D ++ +VLG F + + +D + +++
Sbjct: 123 IGTQEFDRIKIGIGRPKDKMTVVNYVLGKFDKKDEITIFNTLDKVDKAV 171
>gi|67925084|ref|ZP_00518461.1| Peptidyl-tRNA hydrolase [Crocosphaera watsonii WH 8501]
gi|67853058|gb|EAM48440.1| Peptidyl-tRNA hydrolase [Crocosphaera watsonii WH 8501]
Length = 204
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 102/160 (63%), Gaps = 6/160 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTI-LI 59
++ GLGNP +Y + RHNIGF +D I + + +WK ++F I+EG + I L+
Sbjct: 14 LIVGLGNPEPKYDKTRHNIGFEIVD-ILAETWQLSWKETRRFQGMIAEGNSRNQQKIYLL 72
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-I 118
KP T+MN SGQS+ V ++YKL + EN LVI+DD+DL G LR++ G GHNG+KS I
Sbjct: 73 KPSTYMNRSGQSVRAVTDWYKLKS-ENVLVIYDDMDLPIGRLRMRLSGSAGGHNGMKSII 131
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
S G+N+ RLRIGIG+ + I HVLG FS ER +
Sbjct: 132 SHLGGQNFPRLRIGIGKSNQVDNTIPHVLGRFSPEERKII 171
>gi|291087007|ref|ZP_06345123.2| aminoacyl-tRNA hydrolase [Clostridium sp. M62/1]
gi|291076615|gb|EFE13979.1| aminoacyl-tRNA hydrolase [Clostridium sp. M62/1]
Length = 202
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 103/169 (60%), Gaps = 2/169 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG +Y RHN GF+ ID + + +K A I +G ++G + IL K
Sbjct: 4 MYIIAGLGNPGEKYDNTRHNAGFLTIDALADRYGIDVREKAHKALIGKGVIEGQKVILAK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ ++++YK+ E ++I DD+ L+ G LR++ G GHNG+KSI
Sbjct: 64 PQTYMNLSGESIRALVDYYKVTQ-EELVIIFDDISLEPGQLRIRKKGSAGGHNGIKSIIA 122
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
G + + R+++G+G P + +VLG F+ E+ + + A++
Sbjct: 123 HLGTQEFTRIKVGVGEKPPRMDLADYVLGRFAKEEQDTMKEAFETAAKA 171
>gi|225375821|ref|ZP_03753042.1| hypothetical protein ROSEINA2194_01453 [Roseburia inulinivorans DSM
16841]
gi|225212256|gb|EEG94610.1| hypothetical protein ROSEINA2194_01453 [Roseburia inulinivorans DSM
16841]
Length = 198
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 112/190 (58%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNP +Y + RHNIGF +D + + + K A +G ++G++ +L K
Sbjct: 9 MFLIVGLGNPTKQYEKTRHNIGFDVMDALADKYNISISENKHKALCGKGVIEGMKVVLAK 68
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E++N+YKL +V+ DD+ L+ G +R++ G GHNG+K+I
Sbjct: 69 PQTYMNLSGESVAELVNYYKLDPESELIVVFDDISLEPGNIRIRKKGSAGGHNGIKNIIA 128
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +N+ R+++G+G P + +VLG+FS+ +R + I + + L+ + E
Sbjct: 129 MTGTQNFMRIKVGVGEKPKGWDLADYVLGHFSTEDRAKVEEAIGHAMDATVLMMQGEVDK 188
Query: 180 FLNHIVSVRK 189
+N S K
Sbjct: 189 AMNDYNSKNK 198
>gi|126701126|ref|YP_001090023.1| peptidyl-tRNA hydrolase [Clostridium difficile 630]
gi|254977127|ref|ZP_05273599.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-66c26]
gi|255094456|ref|ZP_05323934.1| peptidyl-tRNA hydrolase [Clostridium difficile CIP 107932]
gi|255102712|ref|ZP_05331689.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-63q42]
gi|255308533|ref|ZP_05352704.1| peptidyl-tRNA hydrolase [Clostridium difficile ATCC 43255]
gi|255316207|ref|ZP_05357790.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-76w55]
gi|255518869|ref|ZP_05386545.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-97b34]
gi|255652048|ref|ZP_05398950.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-37x79]
gi|260685022|ref|YP_003216307.1| peptidyl-tRNA hydrolase [Clostridium difficile CD196]
gi|260688680|ref|YP_003219814.1| peptidyl-tRNA hydrolase [Clostridium difficile R20291]
gi|306521785|ref|ZP_07408132.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-32g58]
gi|119390926|sp|Q181A2|PTH_CLOD6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|115252563|emb|CAJ70406.1| Peptidyl-tRNA hydrolase (PTH) [Clostridium difficile]
gi|260211185|emb|CBA66658.1| peptidyl-tRNA hydrolase [Clostridium difficile CD196]
gi|260214697|emb|CBE07348.1| peptidyl-tRNA hydrolase [Clostridium difficile R20291]
Length = 186
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 105/174 (60%), Gaps = 9/174 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGNPG +Y + RHN+GF ID + + K K A I EG++ + +L+K
Sbjct: 1 MYVVVGLGNPGKKYEKTRHNVGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG++L+++ +YK+ +L N +V++DD+DL+ G +R++ G HNG+KSI++
Sbjct: 61 PQTYMNLSGETLIDIYKYYKV-DLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
G N + R+R+G+ +P + VL F E DNI +L A
Sbjct: 120 CLGSNDFPRVRVGVSKPEAGQDLADFVLSRFRKEES-------DNINEALEKAA 166
>gi|295090935|emb|CBK77042.1| peptidyl-tRNA hydrolase [Clostridium cf. saccharolyticum K10]
gi|295116084|emb|CBL36931.1| peptidyl-tRNA hydrolase [butyrate-producing bacterium SM4/1]
Length = 199
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 103/169 (60%), Gaps = 2/169 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG +Y RHN GF+ ID + + +K A I +G ++G + IL K
Sbjct: 1 MYIIAGLGNPGEKYDNTRHNAGFLTIDALADRYGIDVREKAHKALIGKGVIEGQKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ ++++YK+ E ++I DD+ L+ G LR++ G GHNG+KSI
Sbjct: 61 PQTYMNLSGESIRALVDYYKVTQ-EELVIIFDDISLEPGQLRIRKKGSAGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
G + + R+++G+G P + +VLG F+ E+ + + A++
Sbjct: 120 HLGTQEFTRIKVGVGEKPPRMDLADYVLGRFAKEEQDTMKEAFETAAKA 168
>gi|326332303|ref|ZP_08198583.1| aminoacyl-tRNA hydrolase [Nocardioidaceae bacterium Broad-1]
gi|325950009|gb|EGD42069.1| aminoacyl-tRNA hydrolase [Nocardioidaceae bacterium Broad-1]
Length = 203
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 108/182 (59%), Gaps = 12/182 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGL---- 54
+++V GLGNPG Y +RHNIG++ D + + W+ K A++ EG+L G
Sbjct: 10 VWLVVGLGNPGPTYAGHRHNIGYLVTDELAN-RLGSKWRAHKSGRADVVEGRLRGTTPGV 68
Query: 55 ---RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG 111
R +L + +T+MN SG + + FYK+ ++ + IHD+LD+ F T+R+K GGGD G
Sbjct: 69 PGPRVVLARSRTYMNESGGPVKALATFYKV-QPDHVIAIHDELDIAFDTMRVKLGGGDNG 127
Query: 112 HNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
HNGLKS+ G ++ R+R+GIGRPP + VL NFS+ ER L ++D A ++
Sbjct: 128 HNGLKSMRSSLGTGDFHRVRVGIGRPPGRQEVHDFVLSNFSTTERKVLPFVVDTAADAIE 187
Query: 171 LL 172
L
Sbjct: 188 TL 189
>gi|10802611|gb|AAG23529.1|AF244580_1 peptidyl-tRNA hydrolase [Carboxydothermus hydrogenoformans]
Length = 186
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 100/166 (60%), Gaps = 3/166 (1%)
Query: 7 LGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMN 66
+GNPG EY RHN GFM +D + H K+KF + + EG++ G++ +L+KPQT+MN
Sbjct: 6 IGNPGQEYENTRHNAGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLKPQTYMN 65
Query: 67 LSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-KN 125
LSG ++ E ++FYKLP L +V++DDLDL G + L+ G GH G+ SI G +
Sbjct: 66 LSGTAVQEAVSFYKLP-LSRLVVVYDDLDLPLGKICLRLKGSAGGHRGMGSIISCLGSEE 124
Query: 126 YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
RL+IGIGRP + +VL F+ ER L P + A ++ +
Sbjct: 125 IPRLKIGIGRPA-VGDVKDYVLQPFTGAEREILEPTLKLAAEAITV 169
>gi|291166312|gb|EFE28358.1| aminoacyl-tRNA hydrolase [Filifactor alocis ATCC 35896]
Length = 186
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 106/175 (60%), Gaps = 2/175 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNPG +Y RHNIGF+ ID + K KF A + EG++ + +L+K
Sbjct: 1 MYIIVGLGNPGKKYERTRHNIGFLTIDELSRRTGIIPNKLKFKASVGEGRIGTEKVVLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E+M+FYK+ + + +VI+DD+DL+ G LR++ G HNG+++I
Sbjct: 61 PQTFMNLSGESVRELMSFYKVDH-DKLIVIYDDIDLEVGKLRIRKKGSSGTHNGMRNIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G ++ R R+GI ++ +VLGNF E + I+ A ++ L K
Sbjct: 120 LLGYDDFPRFRVGISGENRRGNLADYVLGNFLKEEIPSVADSIERCADAIECLMK 174
>gi|317490360|ref|ZP_07948844.1| peptidyl-tRNA hydrolase [Eggerthella sp. 1_3_56FAA]
gi|325833603|ref|ZP_08166052.1| aminoacyl-tRNA hydrolase [Eggerthella sp. HGA1]
gi|316910495|gb|EFV32120.1| peptidyl-tRNA hydrolase [Eggerthella sp. 1_3_56FAA]
gi|325485527|gb|EGC87996.1| aminoacyl-tRNA hydrolase [Eggerthella sp. HGA1]
Length = 185
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 100/156 (64%), Gaps = 5/156 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG EY RHN GF +D I WK + A ++G +L K
Sbjct: 1 MFLIVGLGNPGEEYEHTRHNAGFDAVDLIAEEVGARYWKTECGALTTKGVYRDHDLVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ++MN SG + ++MN Y + + E+ +V+HD+LD+D GT+R+K GGG AGHNGL+SI +
Sbjct: 61 PQSYMNTSGGPVKQLMNAYGV-DAEHLIVVHDELDIDPGTVRVKFGGGHAGHNGLRSICD 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K G +++ R+R+GIGRPP ++ VL S P++
Sbjct: 120 KLGTRDWHRVRVGIGRPPGRMPVVDWVL---SKPKK 152
>gi|269118736|ref|YP_003306913.1| peptidyl-tRNA hydrolase [Sebaldella termitidis ATCC 33386]
gi|268612614|gb|ACZ06982.1| peptidyl-tRNA hydrolase [Sebaldella termitidis ATCC 33386]
Length = 190
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 96/160 (60%), Gaps = 2/160 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA--WKKKFHAEISEGQLDGLRTIL 58
M ++ GLGNPG Y RHN GF+ +D + F + +K KF EI+E G + +
Sbjct: 1 MKLIVGLGNPGENYKMTRHNAGFIYVDEYLKENGFRSRDYKNKFKGEIAELNKLGKKALF 60
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP TFMNLSG+S+ E +NFYKL + VI+DD+DL+ G ++++ G GHNG+KSI
Sbjct: 61 LKPLTFMNLSGESVREAVNFYKLDPAHDLFVIYDDMDLELGRIKIRKNGRPGGHNGIKSI 120
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G + R++ GIGRP ++ +VLG + E+ L
Sbjct: 121 ISHVGPEFIRIKCGIGRPGGRTDVVNYVLGKLTDEEKEVL 160
>gi|218885593|ref|YP_002434914.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|226723248|sp|B8DKL7|PTH_DESVM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|218756547|gb|ACL07446.1| Aminoacyl-tRNA hydrolase [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 202
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF---------FPAWKKKFHAEISEGQLDG 53
++ GLGNPG EY RHN+GFM +D + KKK+ G
Sbjct: 6 LIVGLGNPGKEYERTRHNLGFMAVDALMEAAARETGGGCDQLSGGKKKYDLWRCRITPTG 65
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
++ KPQTFMNLSG+++L + ++Y++ + LV+HD+LD+ G ++ KTGGG+AGHN
Sbjct: 66 DPWLVAKPQTFMNLSGEAVLAIASYYRI-KPDAILVVHDELDIPLGRMKFKTGGGNAGHN 124
Query: 114 GLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GLKSI++ G ++ RLR+GIGR P VLG S PE+ L ++ +++ +
Sbjct: 125 GLKSITQLLGTPDFHRLRLGIGRSPHGGETTNWVLGRLSGPEQTLLDTLLPAAVQAMTIF 184
Query: 173 AKR 175
A +
Sbjct: 185 ASQ 187
>gi|162446906|ref|YP_001620038.1| peptidyl-tRNA hydrolase [Acholeplasma laidlawii PG-8A]
gi|189038277|sp|A9NE82|PTH_ACHLI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|161985013|gb|ABX80662.1| peptidyl-tRNA hydrolase [Acholeplasma laidlawii PG-8A]
Length = 191
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 111/173 (64%), Gaps = 8/173 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG +Y + RHNIGF+ ID++ S+ + K A ++ +++G I+
Sbjct: 1 MKLIVGLGNPGKQYVQTRHNIGFIAIDKLLSYLNTELKVDSKLQAAYTKTKIEGEDVIIA 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG ++ ++MNFYK+ ++E+ LVI DD L G +R++ G G NGLK I
Sbjct: 61 KPLTYMNLSGDAVTKLMNFYKI-DVEDILVILDDTALPLGKIRIRQTGSHGGQNGLKDII 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHI--IRHVLGNFSSPERYFLLPIIDNIARSL 169
K G K++KRLRIGIG + AH+ + +VLG FS+ E +LP I+ + ++
Sbjct: 120 NKLGTKDFKRLRIGIG---EHAHMDKVDYVLGKFSTNELNTILPTIEYVNDAI 169
>gi|270307957|ref|YP_003330015.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. VS]
gi|270153849|gb|ACZ61687.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. VS]
Length = 189
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 100/176 (56%), Gaps = 5/176 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY NRHN+GF C+ R + KK + G+++ +L K
Sbjct: 1 MKLIIGLGNPGKEYSGNRHNVGFQCLSRFAKDNHISLDKKCCLSRTGSGRINDEEIVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG++ +++ Y L + +V+ DDLDL G +RL+ GG GHNG+ SI
Sbjct: 61 PQTYMNLSGKAASQLLRRYNLK-AADIIVVQDDLDLPAGKIRLRLGGSAGGHNGISSIIT 119
Query: 121 KCG-KNYKRLRIGIGRPP---DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K + RL+IGIG+P + ++ HVLGNF ER + I + +L L
Sbjct: 120 DIGTKEFIRLKIGIGKPDSRNNGTEVVDHVLGNFGGEEREIMEKAITRASEALTCL 175
>gi|311743168|ref|ZP_07716976.1| aminoacyl-tRNA hydrolase [Aeromicrobium marinum DSM 15272]
gi|311313848|gb|EFQ83757.1| aminoacyl-tRNA hydrolase [Aeromicrobium marinum DSM 15272]
Length = 188
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 101/160 (63%), Gaps = 5/160 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILI 59
+++AGLGNPG Y RHN+G++ D + + WK + AE+ EG+L G R +L
Sbjct: 3 WLIAGLGNPGPAYAATRHNVGYLVTD-VLAERVGGRWKSHRASRAEVVEGRLAGERVVLG 61
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+ +++MN SG + + F+ + E+ +V+HD+LD+DFG LRLK GGGD GHNGLKSI
Sbjct: 62 RSRSYMNESGGPVKAMATFFDV-EPEHLVVVHDELDIDFGQLRLKLGGGDNGHNGLKSIR 120
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G ++ R+R+GIGRPP + +VL +S+ ER L
Sbjct: 121 GSLGTGDFHRVRVGIGRPPGQQTVHDYVLKPWSAAERKEL 160
>gi|239629011|ref|ZP_04672042.1| aminoacyl-tRNA hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239519157|gb|EEQ59023.1| aminoacyl-tRNA hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 216
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 103/173 (59%), Gaps = 2/173 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+IVAGLGNP EY + RHN+GF ID + +KKF G + G + +L+K
Sbjct: 28 MYIVAGLGNPTREYEKTRHNVGFEVIDVLADMLGTTVEEKKFKGCYGRGIIGGEKVLLLK 87
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ +FYK+ + E+ ++I+DD+ LD G LR++ G GHNG+K+I
Sbjct: 88 PQTFMNLSGESIRAAADFYKV-DPEHIIIIYDDISLDVGQLRIRKKGSAGGHNGIKNIIA 146
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + + R+++G+G P + +VL FS +R + A+++ ++
Sbjct: 147 HLGTQEFPRIKVGVGDKPKKMDLADYVLSRFSKEDRAAMEDAFKTAAKAVEVM 199
>gi|255657459|ref|ZP_05402868.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-23m63]
gi|296449054|ref|ZP_06890844.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP08]
gi|296879877|ref|ZP_06903850.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP07]
gi|296262147|gb|EFH08952.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP08]
gi|296429166|gb|EFH15040.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP07]
Length = 186
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 105/174 (60%), Gaps = 9/174 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGNPG +Y + RHN+GF ID + + K K A I EG++ + +L+K
Sbjct: 1 MYVVVGLGNPGKKYEKTRHNVGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG++L+++ +YK+ +L N +V++DD+DL+ G +R++ G HNG+KSI++
Sbjct: 61 PQTYMNLSGETLIDIYKYYKV-DLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
G N + R+R+G+ +P + VL F E DNI +L A
Sbjct: 120 CLGSNDFPRVRVGVSKPEVGQDLADFVLSRFRKEES-------DNINEALEKAA 166
>gi|257792490|ref|YP_003183096.1| peptidyl-tRNA hydrolase [Eggerthella lenta DSM 2243]
gi|257476387|gb|ACV56707.1| peptidyl-tRNA hydrolase [Eggerthella lenta DSM 2243]
Length = 185
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 100/156 (64%), Gaps = 5/156 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG EY RHN GF +D I WK + A ++G +L K
Sbjct: 1 MFLIVGLGNPGEEYEHTRHNAGFDAVDLIAEEVGARYWKTECGALTAKGAYRDHDLVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ++MN SG + ++MN Y + + E+ +V+HD+LD+D GT+R+K GGG AGHNGL++I +
Sbjct: 61 PQSYMNTSGGPVKQLMNAYGV-DAEHLIVVHDELDIDPGTVRVKFGGGHAGHNGLRAICD 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K G +++ R+R+GIGRPP ++ VL S P++
Sbjct: 120 KLGTRDWHRVRVGIGRPPGRMPVVDWVL---SKPKK 152
>gi|186684439|ref|YP_001867635.1| peptidyl-tRNA hydrolase [Nostoc punctiforme PCC 73102]
gi|238689436|sp|B2JA15|PTH_NOSP7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|186466891|gb|ACC82692.1| peptidyl-tRNA hydrolase [Nostoc punctiforme PCC 73102]
Length = 213
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 107/181 (59%), Gaps = 9/181 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTI-LIK 60
++ GLGNP +Y + RHNIGF ++ + S+ A +KF E EG G I L+K
Sbjct: 15 LIVGLGNPESKYDQTRHNIGFAAVEALSRSWRISLAENRKFQGEYGEGMAPGGGKIRLLK 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MN SGQS+ V ++YKLP E+ L+I+DD+DL G RL+ G GHNG+KS I+
Sbjct: 75 PLTYMNRSGQSIQAVTSWYKLPP-ESVLIIYDDMDLPLGKTRLRLSGSAGGHNGMKSAIA 133
Query: 120 EKCGKNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+N+ RLRIGIG+P D ++ + HVLG FSS E + ++ + + L K
Sbjct: 134 HLSTQNFPRLRIGIGKPKGAADNDDSNTVSHVLGRFSSAENQQMSLVLQFVVECIELSLK 193
Query: 175 R 175
+
Sbjct: 194 Q 194
>gi|299143245|ref|ZP_07036325.1| aminoacyl-tRNA hydrolase [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298517730|gb|EFI41469.1| aminoacyl-tRNA hydrolase [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 190
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 102/170 (60%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+IVAGLGNPG +Y RHN+GF+ ID + + KF + E + G + L+K
Sbjct: 1 MYIVAGLGNPGRQYENTRHNMGFLAIDELARKLNVNVNRIKFKGLVGETNIAGEKVYLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQ + E+ NFYK+ N +N +VI DD+D++F +L++K G HNGLKSI
Sbjct: 61 PQTYMNNSGQCIYEICNFYKV-NPKNLIVIVDDIDIEFSSLKIKKKGSAGTHNGLKSIIY 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ + R++IG+G+ + VL FS E+ + I+N A+S+
Sbjct: 120 MLQSDEFPRIKIGVGKQGQNEDLADFVLSGFSKSEQTEMNNTIENAAQSV 169
>gi|291286017|ref|YP_003502833.1| peptidyl-tRNA hydrolase [Denitrovibrio acetiphilus DSM 12809]
gi|290883177|gb|ADD66877.1| peptidyl-tRNA hydrolase [Denitrovibrio acetiphilus DSM 12809]
Length = 197
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 106/163 (65%), Gaps = 4/163 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GF+ D++ S + ++ K F E +E +DG + ++KP
Sbjct: 1 MLIVGLGNPGEKYDRTRHNLGFLVADKLASENS-ASFSKGFKGEYAEFFMDGGKHYILKP 59
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ + +YK+P +E+ + +HDDLD++FG L+LK GG D GH G++S+++
Sbjct: 60 YTYMNLSGESVQPLAAYYKIP-VEDIIAVHDDLDIEFGRLKLKKGGNDGGHKGIRSMAQM 118
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G K++ RL++GIG+ I HVLG FS E L ID
Sbjct: 119 LGDKDFIRLKMGIGKDG-RRDTIGHVLGKFSPQESEKLDEFID 160
>gi|255541798|ref|XP_002511963.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
gi|223549143|gb|EEF50632.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
Length = 272
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 95/155 (61%), Gaps = 3/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D + P F A + +G + + +L KP
Sbjct: 79 WLIVGLGNPGKKYQSTRHNVGFEMVDAVADSEGIPLSSVSFKALLGKGYIGNVPVMLAKP 138
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFMN SG+S+ ++++YK+P L+ L+I+DDLDL F LRL GG GHNG++S+ +
Sbjct: 139 QTFMNASGESVGAIVSYYKIP-LKQVLLIYDDLDLPFAKLRLLPKGGHGGHNGMRSVIDH 197
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
K +++ RLRIGIGRPP VL FS E
Sbjct: 198 FKGSRDFPRLRIGIGRPPGKMDSANFVLRPFSRQE 232
>gi|154503861|ref|ZP_02040921.1| hypothetical protein RUMGNA_01687 [Ruminococcus gnavus ATCC 29149]
gi|153795460|gb|EDN77880.1| hypothetical protein RUMGNA_01687 [Ruminococcus gnavus ATCC 29149]
Length = 192
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 98/156 (62%), Gaps = 1/156 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+ GLGNP EY RHN+GF ID + + KK A I +G ++G + IL K
Sbjct: 1 MFIIVGLGNPTPEYEGTRHNVGFEVIDALARKYNIDVDTKKHRAYIGKGMIEGQKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
PQT+MNLSG+S+ ++++YK+ + LVI+DD+ L G +R++ G GHNG+K+ I+
Sbjct: 61 PQTYMNLSGESVRSLLDYYKVDEEQELLVIYDDISLGVGQIRIRAKGSAGGHNGIKNIIA 120
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G+ + R+++G+G P + +VLG+FS E+
Sbjct: 121 HLGGQVFPRIKVGVGEKPPKWDLADYVLGHFSKEEQ 156
>gi|319399659|gb|EFV87913.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis FRI909]
Length = 190
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 107/173 (61%), Gaps = 2/173 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF +D I H F K+KF + +L+G + + I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVVDDILERHQFTLDKQKFKGAYTIERLNGEKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSGQ++ +M++Y + ++E+ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGQAVAPLMDYYNV-DVEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + +KR+RIG+GRP + + +VL FS E + +I++ A+++
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMSVPDYVLQKFSKEEMIIMEKVIEHSAKAVEFF 172
>gi|307711220|ref|ZP_07647642.1| peptidyl-tRNA hydrolase [Streptococcus mitis SK321]
gi|307617182|gb|EFN96360.1| peptidyl-tRNA hydrolase [Streptococcus mitis SK321]
Length = 189
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 106/169 (62%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIEDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R++IGIGRP + ++ HVL F + +L ID + S+
Sbjct: 123 IGTQTFNRVKIGIGRPKNGMSVVNHVLSTFDKDDYIGILQSIDKVDDSV 171
>gi|167758783|ref|ZP_02430910.1| hypothetical protein CLOSCI_01125 [Clostridium scindens ATCC 35704]
gi|167663523|gb|EDS07653.1| hypothetical protein CLOSCI_01125 [Clostridium scindens ATCC 35704]
Length = 194
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 104/183 (56%), Gaps = 1/183 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNP +Y RHN GF ID + + +K A I +G ++G + IL K
Sbjct: 1 MFIIAGLGNPTLQYEGTRHNAGFDVIDTLAGKYNISVDGRKNRALIGKGIIEGKKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+SL ++++YK+ +LV++DD+ LD G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESLGGLVDYYKVDEESEFLVVYDDISLDVGQLRIRKKGSAGGHNGMKNIIS 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+++G+G P + +VL FS ER + ++ ++ + E
Sbjct: 121 HLGTEVFPRIKVGVGEKPKKYDLADYVLSRFSKEERAIMEEGCQKAVEAVEMILRGEMEE 180
Query: 180 FLN 182
+N
Sbjct: 181 AMN 183
>gi|26453108|dbj|BAC43630.1| unknown protein [Arabidopsis thaliana]
gi|28950849|gb|AAO63348.1| At1g18440 [Arabidopsis thaliana]
Length = 288
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 97/156 (62%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D + F A +G + + +L KP
Sbjct: 95 WLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKP 154
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFM+LSG+S+ ++++FYK+P L+ LV++DDLDL FG LRL GG GHNG++SI +
Sbjct: 155 QTFMDLSGESVGQIVSFYKIP-LKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 213
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K +++ RLRIGIGRPP VL F+ E+
Sbjct: 214 LKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQ 249
>gi|218134567|ref|ZP_03463371.1| hypothetical protein BACPEC_02470 [Bacteroides pectinophilus ATCC
43243]
gi|217989952|gb|EEC55963.1| hypothetical protein BACPEC_02470 [Bacteroides pectinophilus ATCC
43243]
Length = 187
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 2/176 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG +Y RHNIGF ID + + K +G + + +L+K
Sbjct: 1 MYIIAGLGNPGKQYEGTRHNIGFAVIDELADAYNINMDMAKHKGICGKGMIGSNKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+ L EV+++YK +++N LVI+DD+ LD G LRL+ G GHNG+KSI
Sbjct: 61 PQTFMNNSGECLREVLDYYK-EDVDNVLVIYDDICLDVGRLRLRPKGSAGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G + + R+R+G+G P + VLG+F + + ID +++P++ R
Sbjct: 120 HLGTEEFSRIRVGVGDKPKNYDLADWVLGHFPKEQLDDVRAGIDKAVKAVPVVLDR 175
>gi|322377901|ref|ZP_08052389.1| aminoacyl-tRNA hydrolase [Streptococcus sp. M334]
gi|321281077|gb|EFX58089.1| aminoacyl-tRNA hydrolase [Streptococcus sp. M334]
Length = 189
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 105/169 (62%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
I+ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+KP
Sbjct: 4 ILVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIEDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + R++IGIGRP + ++ HVL F + +L ID + S+
Sbjct: 123 IGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDKDDYIGILQSIDKVDDSV 171
>gi|307710363|ref|ZP_07646804.1| peptidyl-tRNA hydrolase [Streptococcus mitis SK564]
gi|307618955|gb|EFN98090.1| peptidyl-tRNA hydrolase [Streptococcus mitis SK564]
Length = 189
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 106/169 (62%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIEDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R++IGIGRP + ++ HVL F + +L ID + S+
Sbjct: 123 IGTQTFNRVKIGIGRPKNGMSVVHHVLSTFDKDDYIGILQSIDKVDDSI 171
>gi|210608665|ref|ZP_03287942.1| hypothetical protein CLONEX_00121 [Clostridium nexile DSM 1787]
gi|210152922|gb|EEA83928.1| hypothetical protein CLONEX_00121 [Clostridium nexile DSM 1787]
Length = 224
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 107/183 (58%), Gaps = 1/183 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNP +Y RHN GF ID + + +K A +G + G + +L+K
Sbjct: 34 MFVIVGLGNPTAQYEGTRHNAGFDVIDVLAEKYNISVDARKCRAFCGKGVIAGQKVLLVK 93
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ ++N+YK+ + LVI+DD+ LD G LR++ G GHNG+KSI
Sbjct: 94 PQTYMNLSGESVGGIVNYYKIDPESDLLVIYDDISLDVGQLRIRKKGSAGGHNGIKSIIA 153
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+++G+G P + +VLG+FS ER + ++ + ++ + + E +
Sbjct: 154 HLGTTVFPRIKVGVGEKPKNYDLADYVLGHFSKQERELMEEGYEHASDAVEQIVQGEIEA 213
Query: 180 FLN 182
+N
Sbjct: 214 AMN 216
>gi|307707903|ref|ZP_07644378.1| peptidyl-tRNA hydrolase [Streptococcus mitis NCTC 12261]
gi|307615968|gb|EFN95166.1| peptidyl-tRNA hydrolase [Streptococcus mitis NCTC 12261]
Length = 189
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 106/169 (62%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIEDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R++IGIGRP + ++ HVL F + +L ID + S+
Sbjct: 123 IGTQTFNRVKIGIGRPKNGMSVVHHVLSTFDKDDYIGILQSIDKVDDSV 171
>gi|94987180|ref|YP_595113.1| peptidyl-tRNA hydrolase [Lawsonia intracellularis PHE/MN1-00]
gi|119390955|sp|Q1MQD5|PTH_LAWIP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|94731429|emb|CAJ54792.1| Peptidyl-tRNA hydrolase [Lawsonia intracellularis PHE/MN1-00]
Length = 201
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 112/187 (59%), Gaps = 4/187 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIKP 61
I+AGLGNPG +Y + RHNIGFM I+++ + KKF+ E+ + +L KP
Sbjct: 6 IIAGLGNPGGQYEKTRHNIGFMVINKLITITSASKLSGKKFYCELWKTTTIIDNYLLAKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+++ ++ +Y + +N LVIHD+LDL G ++L+ GGG AGHNGLKSI
Sbjct: 66 QTYMNLSGEAIHPLVEWYNITK-DNLLVIHDELDLPIGKMKLQQGGGTAGHNGLKSIIHN 124
Query: 122 CG-KNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLRIGIGR P + + + VLG+ S E L + I +L K E +
Sbjct: 125 LGTKDFYRLRIGIGRSPLPSENTVNWVLGHLSMKELTTLNNLFPTIFDALSFFIKDEKET 184
Query: 180 FLNHIVS 186
+ I S
Sbjct: 185 AIRMINS 191
>gi|295108813|emb|CBL22766.1| peptidyl-tRNA hydrolase [Ruminococcus obeum A2-162]
Length = 192
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 105/173 (60%), Gaps = 1/173 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG +Y RHN+GF ID++ + P KF+A +G++ G IL+K
Sbjct: 1 MYLIVGLGNPGRQYEATRHNMGFDVIDKLVEEYQVPQAGVKFNAMYGKGRIGGQPVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P ++MNLSG + E+ N++K+ +V++DD+DLD G LR++ G GHNG+K I +
Sbjct: 61 PLSYMNLSGGPIREMANYFKIDPETEMIVVYDDIDLDPGQLRIRKKGSAGGHNGIKHIIQ 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ G +N+ R+++G+G P + +VLG F +R + + +++ L+
Sbjct: 121 QLGTQNFVRIKVGVGAKPKGWDLADYVLGRFDKEDRALIEEAQERACKAVELI 173
>gi|169830289|ref|YP_001716271.1| aminoacyl-tRNA hydrolase [Candidatus Desulforudis audaxviator
MP104C]
gi|238688211|sp|B1I197|PTH_DESAP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169637133|gb|ACA58639.1| Aminoacyl-tRNA hydrolase [Candidatus Desulforudis audaxviator
MP104C]
Length = 195
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 101/165 (61%), Gaps = 5/165 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN GFM +DR+ +++ + + EG+L+G+R +L K
Sbjct: 1 MKLIVGLGNPGAKYRFTRHNAGFMVVDRLAGAAGTTVNRRRCFSLVGEGRLNGVRVVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG ++ + Y+L L + LVI DDLDL+FG +RL+ GG GH GL SI
Sbjct: 61 PQTYMNLSGLAVSALCRHYRL-ELADLLVICDDLDLEFGRIRLRPKGGSGGHRGLASIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G ++ R+RIGIG+ D + HVLG F+ ++ L I+
Sbjct: 120 ALGSSDFPRVRIGIGKAEDASA---HVLGEFAPEDQSGLEEILST 161
>gi|312623039|ref|YP_004024652.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203506|gb|ADQ46833.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kronotskyensis 2002]
Length = 189
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 108/184 (58%), Gaps = 4/184 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+AGLGNPG +Y RHN GF+ ID + K KF + + G + +L+KP
Sbjct: 3 YIIAGLGNPGEKYIFTRHNAGFLAIDYLAQLFNTKVDKIKFKGLVGSFEYAGKKVLLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S++E +NFYK+ E +VI+DD+ D G ++++ G D GHNG+KSI +
Sbjct: 63 MTYMNASGESIIEAVNFYKIKT-EKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQC 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + + R+RIGIG P ++++VL F E+ + I+ + + +L + +
Sbjct: 122 LGTEEFPRIRIGIGVPK--YDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDRA 179
Query: 181 LNHI 184
+N+I
Sbjct: 180 MNYI 183
>gi|293375930|ref|ZP_06622191.1| aminoacyl-tRNA hydrolase [Turicibacter sanguinis PC909]
gi|325838695|ref|ZP_08166610.1| aminoacyl-tRNA hydrolase [Turicibacter sp. HGF1]
gi|292645452|gb|EFF63501.1| aminoacyl-tRNA hydrolase [Turicibacter sanguinis PC909]
gi|325490745|gb|EGC93052.1| aminoacyl-tRNA hydrolase [Turicibacter sp. HGF1]
Length = 186
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 103/165 (62%), Gaps = 4/165 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M + GLGNPG +Y RHN GFM ID + ++ +KKF +I G + G + IL+
Sbjct: 1 MKLFVGLGNPGSKYERTRHNAGFMVIDALSKEWNIELTDEKKFKGQIGRGVVKGEKVILL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-I 118
KP TFMNLSG+S+ VM+FY + ++E+ +VI+DDLDL G +RL+ G GHNG+KS I
Sbjct: 61 KPTTFMNLSGESVRAVMDFYDI-DIEDLVVIYDDLDLPHGKIRLRLKGSAGGHNGIKSLI 119
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+ + +KR+R+GI R P ++ +VLG F+ E + ID
Sbjct: 120 AHVKTQEFKRIRVGIDRHPKIP-VVDYVLGKFTEDELALVNQAID 163
>gi|270291824|ref|ZP_06198039.1| aminoacyl-tRNA hydrolase [Streptococcus sp. M143]
gi|270279352|gb|EFA25194.1| aminoacyl-tRNA hydrolase [Streptococcus sp. M143]
Length = 189
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 105/169 (62%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ +G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFFNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + R++IGIGRP + ++ HVL F + +L ID + S+
Sbjct: 123 IGTQVFNRVKIGIGRPKKSMSVVHHVLSKFDQDDYVGILQSIDKVDDSV 171
>gi|313884481|ref|ZP_07818242.1| aminoacyl-tRNA hydrolase [Eremococcus coleocola ACS-139-V-Col8]
gi|312620265|gb|EFR31693.1| aminoacyl-tRNA hydrolase [Eremococcus coleocola ACS-139-V-Col8]
Length = 186
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 102/178 (57%), Gaps = 2/178 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y RHN+GF ID+ H K+KF A+ + +L+K
Sbjct: 1 MKLFVGLGNPGEKYEATRHNVGFAVIDQFMQDHGLAMTKQKFRADYEIWHSPKEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++L +M++Y + +E+ +V++DDLDLD G +RL+ G GHNG+KSI
Sbjct: 61 PFTYMNASGEAVLPIMSYYGI-GMEDLVVVYDDLDLDPGRIRLRQKGSSGGHNGMKSIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R+R+GIGRP ++ HVL F E+ + + A +L ED
Sbjct: 120 ILGSDQFNRIRVGIGRPHPGWKVVDHVLAPFDKTEQVLIDQAVGQAASALTDYLDNED 177
>gi|167463171|ref|ZP_02328260.1| peptidyl-tRNA hydrolase [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322381191|ref|ZP_08055194.1| peptidyl-tRNA hydrolase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321154767|gb|EFX47038.1| peptidyl-tRNA hydrolase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 186
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 102/173 (58%), Gaps = 2/173 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M GLGNPG Y RHNIGFM IDR ++ K +E++E ++ + L+K
Sbjct: 1 MKCFVGLGNPGRAYTHTRHNIGFMAIDRFAEKLGGVRFQSKCKSELAEVRVGTEKVYLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ M++YK+ ++++ ++++DD D DFG +RL+ G GHNG+KS+
Sbjct: 61 PVTYMNLSGEAIRAFMDYYKV-DVQDIVIVYDDRDTDFGKIRLRYKGSAGGHNGIKSVIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + +KR+R+GI RP I +VL NF+ E L I+D +L
Sbjct: 120 HIGTQEFKRIRMGISRPAPGQDIADYVLSNFNKAEMAELPSILDKTCEALEFF 172
>gi|154684572|ref|YP_001419733.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens FZB42]
gi|166199305|sp|A7Z0H6|PTH_BACA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|154350423|gb|ABS72502.1| SpoVC [Bacillus amyloliquefaciens FZB42]
Length = 188
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y RHN+GFM ID + K KF+ G + G + +L+K
Sbjct: 1 MLVIAGLGNPGKTYENTRHNVGFMAIDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ L ++++Y + E+ VI+DDLDL G +RL+T G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECLRPILDYYD-ADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQ 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + R+RIGIGRP + ++ +VLG F+ E
Sbjct: 120 HLGTPEFDRVRIGIGRPVNGMKVVDYVLGAFTKEE 154
>gi|57234607|ref|YP_181337.1| peptidyl-tRNA hydrolase [Dehalococcoides ethenogenes 195]
gi|119390932|sp|Q3Z8W2|PTH_DEHE1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|57225055|gb|AAW40112.1| peptidyl-tRNA hydrolase [Dehalococcoides ethenogenes 195]
Length = 189
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 100/176 (56%), Gaps = 5/176 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY NRHN+GF C+ R + KK + G+++ +L K
Sbjct: 1 MKLIIGLGNPGKEYSGNRHNVGFQCLSRFAKDNHISFDKKCCLSRTGSGRINDEEIVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG++ +++ Y L + +V+ DDLDL G +RL+ GG GHNG+ SI
Sbjct: 61 PQTYMNLSGKAASQLLRRYNLK-AADIIVVQDDLDLPAGKIRLRLGGSAGGHNGISSIIT 119
Query: 121 KCG-KNYKRLRIGIGRPP---DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K + RL+IGIG+P + ++ HVLGNF ER + I + +L L
Sbjct: 120 DIGTKEFIRLKIGIGKPDSRNNGTEVVDHVLGNFGGEEREIMDKAITRASEALTCL 175
>gi|16124739|ref|NP_419303.1| peptidyl-tRNA hydrolase [Caulobacter crescentus CB15]
gi|221233454|ref|YP_002515890.1| peptidyl-tRNA hydrolase [Caulobacter crescentus NA1000]
gi|22095997|sp|Q9AAV9|PTH_CAUCR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783859|sp|B8GZU8|PTH_CAUCN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|13421661|gb|AAK22471.1| peptidyl-tRNA hydrolase [Caulobacter crescentus CB15]
gi|220962626|gb|ACL93982.1| peptidyl-tRNA hydrolase [Caulobacter crescentus NA1000]
Length = 205
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 119/189 (62%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL---DG-LRT 56
M I+AGLGNP +Y +NRHN+GFM +D + W+ +F EGQ+ DG ++
Sbjct: 1 MLILAGLGNPEPKYEKNRHNVGFMAVDALARKWGTAPWRARFQGLACEGQVSTPDGPVKL 60
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L+KP+T+ N SG+++ E M F+KL + +V HD++D+ G R+K+GGG AG+NG++
Sbjct: 61 LLLKPKTYYNESGRAVGEAMKFFKL-QPTDVIVFHDEIDMAPGRFRMKSGGGAAGNNGIR 119
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
S++ + G ++R RIG+G P ++ +VLG+F E +L PI+D IA +LP A +
Sbjct: 120 SVTSQVGDAFRRGRIGVGHPGHKDAVMHYVLGDFHKVEHQWLDPILDAIADALPFAAVGD 179
Query: 177 DVSFLNHIV 185
D + ++
Sbjct: 180 DERYQAEVM 188
>gi|302877723|ref|YP_003846287.1| peptidyl-tRNA hydrolase [Gallionella capsiferriformans ES-2]
gi|302580512|gb|ADL54523.1| peptidyl-tRNA hydrolase [Gallionella capsiferriformans ES-2]
Length = 192
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 98/170 (57%), Gaps = 3/170 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN+GF +D + + KFH + G + G IL+KP
Sbjct: 6 LIVGLGNPGREYEATRHNVGFWWVDELAEEAELNFKSEAKFHGLSARGLVLGRELILLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-ISE 120
QTFMNLSG+S+ + FYK+ + LV+HD+LDL G RLK GG GHNGLK I++
Sbjct: 66 QTFMNLSGRSVGALAQFYKIAPAQ-ILVVHDELDLQPGIARLKLGGSHGGHNGLKDIIAQ 124
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G+ + RLR+GIG P D A + VLG+ ER +L + LP
Sbjct: 125 LGGREFWRLRLGIGHPGDRAQVSDFVLGHPREAERELMLEAQHQSMQVLP 174
>gi|291278877|ref|YP_003495712.1| peptidyl-tRNA hydrolase PTH1 family [Deferribacter desulfuricans
SSM1]
gi|290753579|dbj|BAI79956.1| peptidyl-tRNA hydrolase, PTH1 family [Deferribacter desulfuricans
SSM1]
Length = 192
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 101/157 (64%), Gaps = 7/157 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG EY + RHNIGFM +D + S+ F +K F E + + +KP
Sbjct: 1 MIVGLGNPGKEYAKTRHNIGFMVLDEVASY-FNVNFKSGFKGVYGEYK----NWLFLKPF 55
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG+S+ E+++FYK+ N+E+ LVIHDDLD+DFG ++ K GG D GHNG++SI
Sbjct: 56 TYMNRSGESVKEIVDFYKI-NVEDILVIHDDLDMDFGKIKFKKGGSDGGHNGIRSIINHL 114
Query: 123 -GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
++ R +IGI +P + + ++VL F+S E+ L
Sbjct: 115 DSTDFYRFKIGISKPLRSEYTSKYVLAEFNSFEKKVL 151
>gi|253576882|ref|ZP_04854207.1| peptidyl-tRNA hydrolase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843749|gb|EES71772.1| peptidyl-tRNA hydrolase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 186
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 101/165 (61%), Gaps = 6/165 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y + RHNIGFM +D + H + K A I EG L G + +LIK
Sbjct: 1 MKWIVGLGNPGAQYEKTRHNIGFMAVDELARRHGIEIKQSKCKALIGEGMLPGGKVVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ M++YK ++E+ +V++DDLD + G RL+ G GHNG+KSI +
Sbjct: 61 PMTYMNLSGEAVRAYMDYYK-ASIEDMIVVYDDLDTELGRNRLRYQGSAGGHNGIKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G + + R+R+GI RP ++ +VL F ++ P++D
Sbjct: 120 HIGTQTFNRIRMGISRPEPGYAVVDYVLSPFPKKDK----PLLDQ 160
>gi|153811641|ref|ZP_01964309.1| hypothetical protein RUMOBE_02033 [Ruminococcus obeum ATCC 29174]
gi|149832382|gb|EDM87467.1| hypothetical protein RUMOBE_02033 [Ruminococcus obeum ATCC 29174]
Length = 192
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG +Y RHN+GF ID++ + P KF+A +G+++G IL+K
Sbjct: 1 MYLIVGLGNPGRQYEATRHNMGFDVIDKLVEEYNVPQSGVKFNAMYGKGRIEGQPVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P ++MNLSG + ++ N++K+ +VI+DD+DL+ G LR++ G GHNG+K I +
Sbjct: 61 PLSYMNLSGGPVRDMANYFKIDPETEMIVIYDDIDLEPGQLRIRKKGSAGGHNGIKHIIQ 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ G + + R+++G+G P + HVLG F S ER + + +++ ++
Sbjct: 121 QLGTQTFVRIKVGVGAKPKGWDLADHVLGRFGSNERKLVEEAQERACKAVEMI 173
>gi|28572814|ref|NP_789594.1| peptidyl-tRNA hydrolase [Tropheryma whipplei TW08/27]
gi|46576789|sp|Q83HD8|PTH_TROW8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|28410947|emb|CAD67332.1| peptidyl-tRNA hydrolase [Tropheryma whipplei TW08/27]
Length = 186
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 103/175 (58%), Gaps = 18/175 (10%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILI 59
++IVAGLGNPG Y + RHN+G M +D + F K F+ + + +L+
Sbjct: 3 VYIVAGLGNPGPSYDKTRHNVGQMVLDILSGGARFRRHKTNNFYLSLGD-------ILLV 55
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP +MNLSG + +M F+ + +L LV+HDD+DL GTLR K GGG AGH GL+SIS
Sbjct: 56 KPDAYMNLSGPVIASLMKFHSVSDL---LVLHDDIDLPLGTLRFKQGGGTAGHRGLRSIS 112
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ G +Y RLR+GIGRP + I VL NFS + D I+R++ L A+
Sbjct: 113 DCLGSDYARLRVGIGRPENNQSIEDFVLSNFSPVQ-------TDIISRTIQLAAE 160
>gi|313672205|ref|YP_004050316.1| peptidyl-tRNA hydrolase [Calditerrivibrio nitroreducens DSM 19672]
gi|312938961|gb|ADR18153.1| peptidyl-tRNA hydrolase [Calditerrivibrio nitroreducens DSM 19672]
Length = 199
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 101/158 (63%), Gaps = 4/158 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++VAGLGNPG Y RHNIGFM +D + F ++K F A+ + + G R ++KP
Sbjct: 4 WLVAGLGNPGDRYRFTRHNIGFMVVDMMAD-RFNLSFKGGFEADYAVADIFGKRCYIVKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-ISE 120
QT+MNLSG+S+ E+ ++ +P EN +V+HDDLDL FG +++K GG GHNG+ S I+
Sbjct: 63 QTYMNLSGKSISEISKYFDIPK-ENIIVVHDDLDLSFGRIKIKVGGSSGGHNGINSIIAC 121
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
++ R+++GI +P + + VL FS+ E+ FL
Sbjct: 122 LSSSDFTRVKMGIDKPK-SKDVSGFVLSEFSAEEKKFL 158
>gi|32476152|ref|NP_869146.1| peptidyl-tRNA hydrolase [Rhodopirellula baltica SH 1]
gi|46576732|sp|Q7UKV0|PTH_RHOBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|32446696|emb|CAD76532.1| peptidyl-tRNA hydrolase [Rhodopirellula baltica SH 1]
Length = 190
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHNIGFM D + + KF EISE +++ + +++
Sbjct: 1 MKLVVGLGNPGRKYDQTRHNIGFMVADALVRRYVGSPPTTKFEGEISECRIENEKVLVLC 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS+ + M+FYKL + E+ LVI DDL+L+ G +RL+ G G GL I
Sbjct: 61 PQTYMNASGQSVRKAMDFYKL-SPEDILVICDDLNLETGRVRLRRSGSAGGQKGLVDIIR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + + RL+IGIGRPP + +VLG F E
Sbjct: 120 HLGSEQWARLKIGIGRPPAKWQVSDYVLGKFDKTE 154
>gi|308171944|ref|YP_003918649.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens DSM 7]
gi|307604808|emb|CBI41179.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens DSM 7]
gi|328551754|gb|AEB22246.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens TA208]
gi|328910014|gb|AEB61610.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens LL3]
Length = 188
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y RHN+GFM ID + K KF+ G + G + +L+K
Sbjct: 1 MLVIAGLGNPGKTYENTRHNVGFMAIDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ L ++++Y + E+ VI+DDLDL G +RL+T G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECLRPLLDYYD-ADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQ 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + R+RIGIGRP + ++ +VLG F+ E
Sbjct: 120 HLGTPEFDRVRIGIGRPANGMKVVDYVLGAFTKEE 154
>gi|238917834|ref|YP_002931351.1| hypothetical protein EUBELI_01915 [Eubacterium eligens ATCC 27750]
gi|259535178|sp|C4Z4L5|PTH_EUBE2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238873194|gb|ACR72904.1| Hypothetical protein EUBELI_01915 [Eubacterium eligens ATCC 27750]
Length = 186
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 94/155 (60%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG EY RHN GF ID + + K I +G + G + IL+K
Sbjct: 1 MYIIAGLGNPGKEYMGTRHNAGFSVIDELADKYNISVDTAKHKGLIGKGVIAGQKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+ + EVM++YK +++++LVI DD+ LD G LRL+ G GHNG+KSI
Sbjct: 61 PMTYMNNSGECIREVMDYYKC-DIDDFLVIFDDISLDVGKLRLRAKGSAGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + +KR++ G+G P + VLG F + E
Sbjct: 120 HLGSDKFKRIKFGVGDKPKNWDLADWVLGKFPAEE 154
>gi|28493618|ref|NP_787779.1| peptidyl-tRNA hydrolase [Tropheryma whipplei str. Twist]
gi|46576787|sp|Q83FR1|PTH_TROWT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|28476660|gb|AAO44748.1| peptidyl-tRNA hydrolase [Tropheryma whipplei str. Twist]
Length = 186
Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 103/175 (58%), Gaps = 18/175 (10%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILI 59
++IVAGLGNPG Y + RHN+G M +D + F K F+ + + +L+
Sbjct: 3 VYIVAGLGNPGPSYDKTRHNVGQMVLDILSGGARFRRHKTNNFYLSLGD-------ILLV 55
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP +MNLSG + +M F+ + +L LV+HDD+DL GTLR K GGG AGH GL+SIS
Sbjct: 56 KPDAYMNLSGPVIASLMKFHSVSDL---LVLHDDIDLPLGTLRFKQGGGTAGHRGLRSIS 112
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ G +Y RLR+GIGRP + I VL NFS + D I+R++ L A+
Sbjct: 113 DCLGSDYARLRVGIGRPENNQSIEDFVLSNFSPVQ-------TDIISRTIQLAAE 160
>gi|220908888|ref|YP_002484199.1| aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7425]
gi|219865499|gb|ACL45838.1| Aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7425]
Length = 213
Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 104/172 (60%), Gaps = 6/172 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHNIGFM +D + +H + K+F AE EG + G L+KP
Sbjct: 14 LIVGLGNPGEKYYRTRHNIGFMVVDALADRWHISLSPHKRFQAEFGEGAVRGATVQLLKP 73
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ V+++YK + ++ LV++DD+DL G LRL+ G GHNG++S+
Sbjct: 74 TTYMNNSGQSVRAVLDWYKR-SPQSVLVVYDDMDLPLGKLRLRLNGSAGGHNGMRSLIAH 132
Query: 122 CG-KNYKRLRIGIGRPPDTA---HIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +++ RLR+GIG P I HVLG FS E + +++ +++
Sbjct: 133 LGTQDFPRLRLGIGNPRQAGGEKDAIPHVLGKFSPAEGPIVAEVLELATKAI 184
>gi|322392421|ref|ZP_08065881.1| aminoacyl-tRNA hydrolase [Streptococcus peroris ATCC 700780]
gi|321144413|gb|EFX39814.1| aminoacyl-tRNA hydrolase [Streptococcus peroris ATCC 700780]
Length = 189
Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 104/169 (61%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F AE++ L+G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVSFTHDKIFQAELASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIEDLLIIYDDLDMEVGKIRLRVKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + R++IGIGRP ++ HVL F + +L ID + ++
Sbjct: 123 IGTQVFNRVKIGIGRPKKGMSVVHHVLSKFDQEDYIDILQSIDKVDDAV 171
>gi|255281408|ref|ZP_05345963.1| aminoacyl-tRNA hydrolase [Bryantella formatexigens DSM 14469]
gi|255267896|gb|EET61101.1| aminoacyl-tRNA hydrolase [Bryantella formatexigens DSM 14469]
Length = 191
Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 94/156 (60%), Gaps = 1/156 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG +Y RHN+GF ID + + +K A G+++G +L+K
Sbjct: 1 MYIIAGLGNPGRQYAHTRHNVGFDTIDVLAEKYNIKVEYEKGRALTGSGRIEGQSVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P TFMNLSG+S+ + +FYK+ +VI+DD+ L G LR++ G GHNG+KS IS
Sbjct: 61 PLTFMNLSGESIRALADFYKIDGTSQLIVIYDDISLPPGQLRIREKGSAGGHNGIKSIIS 120
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G+ + R+++G+G P + +VL FS ER
Sbjct: 121 HLGGQEFLRIKVGVGEKPAGWDLADYVLSRFSQEER 156
>gi|148265700|ref|YP_001232406.1| peptidyl-tRNA hydrolase [Geobacter uraniireducens Rf4]
gi|189038152|sp|A5G7R5|PTH_GEOUR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146399200|gb|ABQ27833.1| peptidyl-tRNA hydrolase [Geobacter uraniireducens Rf4]
Length = 191
Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 110/171 (64%), Gaps = 3/171 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y RHN GFM +DR+ +K F EG G R IL+KPQ
Sbjct: 5 LIVGLGNPGPKYQWTRHNAGFMVLDRLSHLTGITVTRKNFSGLCGEGSWQGDRLILLKPQ 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S+ E + F+KL +E+ +VIHDDLD+ FG ++LK GGG AGHNGL+S+S++
Sbjct: 65 TFMNLSGRSVAEALRFHKL-TVEDLIVIHDDLDIPFGRVKLKAGGGHAGHNGLRSLSQEL 123
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + R+R+GIGRP ++ +VL NFS E L ++D I L +L
Sbjct: 124 GSGAFLRVRMGIGRPLH-GDVVNYVLSNFSPEEMIGLPRLLDGIVDLLEML 173
>gi|317495444|ref|ZP_07953813.1| peptidyl-tRNA hydrolase [Gemella moribillum M424]
gi|316914503|gb|EFV35980.1| peptidyl-tRNA hydrolase [Gemella moribillum M424]
Length = 185
Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 99/160 (61%), Gaps = 12/160 (7%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-----KKKFHAEISEGQLDGLR 55
M ++ GLGNPG +Y RHNIGFM +D + AW K KF+A+ + +G++
Sbjct: 1 MKLIVGLGNPGKQYENTRHNIGFMILDELAK-----AWNINFDKNKFNADYAITYYNGIK 55
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+LIKP T+MNLSG++L + +++++ N+E+ LVI+DDLD +LK G GHNGL
Sbjct: 56 YLLIKPTTYMNLSGEALRKFYDYFEI-NIEDILVIYDDLDTKTANFKLKAKGSSGGHNGL 114
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
KSI G + + RL+IGI RP ++ +VLG FS E
Sbjct: 115 KSIISHLGTEKFNRLKIGIDRPTPPMKVVDYVLGRFSKDE 154
>gi|306835688|ref|ZP_07468694.1| aminoacyl-tRNA hydrolase [Corynebacterium accolens ATCC 49726]
gi|304568406|gb|EFM43965.1| aminoacyl-tRNA hydrolase [Corynebacterium accolens ATCC 49726]
Length = 177
Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 102/167 (61%), Gaps = 12/167 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLRT 56
+V GLGNPG +Y RHNIGF D + SF KK + E++EG L G +
Sbjct: 4 LLVVGLGNPGPKYSGTRHNIGFDVADELAGELMSSFSVH----KKTNTEVAEGMLSGRKV 59
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
I KP++FMNLSG + + ++ L + +V+HD+L+LDFGT++L+ GGGD GHNGL+
Sbjct: 60 ICAKPRSFMNLSGGPIKALAQYFHL-TPADIVVVHDELELDFGTVKLRQGGGDHGHNGLR 118
Query: 117 SISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
S ++ G K+Y+RL IGIGRPP VL +S E+ +PI+
Sbjct: 119 STTKSLGTKDYQRLSIGIGRPPGRMDPASFVLKPWSKQEK-VEIPIL 164
>gi|309799276|ref|ZP_07693524.1| peptidyl-tRNA hydrolase [Streptococcus infantis SK1302]
gi|308117121|gb|EFO54549.1| peptidyl-tRNA hydrolase [Streptococcus infantis SK1302]
Length = 189
Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 104/169 (61%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F AE++ L+G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQAELASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHSLLTYYGL-DIEDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + R++IGIGRP ++ HVL F + +L ID + ++
Sbjct: 123 IGTQVFNRVKIGIGRPKKGMSVVHHVLSKFDKDDYIGILQSIDKVDDAV 171
>gi|260589952|ref|ZP_05855865.1| aminoacyl-tRNA hydrolase [Blautia hansenii DSM 20583]
gi|331084271|ref|ZP_08333376.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 6_1_63FAA]
gi|260539759|gb|EEX20328.1| aminoacyl-tRNA hydrolase [Blautia hansenii DSM 20583]
gi|330401806|gb|EGG81383.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 195
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 112/184 (60%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y + RHN+GF +D + H P A +G + G + I+ K
Sbjct: 1 MLLIAGLGNPGKQYEKTRHNMGFDVVDELIDRHEIPQAGIAHKALYGKGIIGGEKVIVEK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ E +++YK+ +VI+DD+DL+ G +R++ G GHNG+K+I
Sbjct: 61 PLTYMNLSGESVREFIDYYKMDPETEMIVIYDDIDLEPGQIRIRKKGSAGGHNGIKNIIA 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +N+ R+++G+G P + +VLG FSS ER + I + A ++ ++ ++ +
Sbjct: 121 QLGTQNFYRIKVGVGAKPKGWDLADYVLGRFSSKEREVVDAAIQDAADAVEMIIEKGIDA 180
Query: 180 FLNH 183
+NH
Sbjct: 181 AMNH 184
>gi|282898185|ref|ZP_06306176.1| Peptidyl-tRNA hydrolase [Raphidiopsis brookii D9]
gi|281196716|gb|EFA71621.1| Peptidyl-tRNA hydrolase [Raphidiopsis brookii D9]
Length = 213
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 106/184 (57%), Gaps = 12/184 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTI-LIK 60
++ GLGNP +Y + RHNIGF ID + ++H +KF + EG G + I ++K
Sbjct: 15 LIVGLGNPDPKYDQTRHNIGFAAIDALSRNWHIPVTENRKFQGQFGEGLALGSKKIRILK 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MN SG+S+ V ++YKLP E+ LVI+DD+DL G RL+ G GHNG+KS IS
Sbjct: 75 PLTYMNRSGESIQAVTSWYKLPP-ESVLVIYDDMDLPLGKTRLRLSGSAGGHNGMKSTIS 133
Query: 120 EKCGKNYKRLRIGIGRPP--------DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
+N+ RLRIGIG+P D + HVLG FS E + PI+ + + L
Sbjct: 134 HLNSQNFPRLRIGIGKPKNLPNNSNNDDGGTVSHVLGKFSPQEAKLIDPILAFVVECVEL 193
Query: 172 LAKR 175
K+
Sbjct: 194 TLKQ 197
>gi|306826191|ref|ZP_07459526.1| aminoacyl-tRNA hydrolase [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304431667|gb|EFM34648.1| aminoacyl-tRNA hydrolase [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 189
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID+I K F A+++ L+G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQIAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAIHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + R++IGIGRP ++ HVL F +L ID + ++
Sbjct: 123 IGTQVFNRIKIGIGRPQKGMSVVHHVLSKFDQENYVGILQSIDKVDDAV 171
>gi|222528652|ref|YP_002572534.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor bescii DSM 6725]
gi|254783849|sp|B9MPK0|PTH_ANATD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|222455499|gb|ACM59761.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor bescii DSM 6725]
Length = 189
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 107/184 (58%), Gaps = 4/184 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+ GLGNPG Y RHN GF+ ID + F K KF + + G + +L+KP
Sbjct: 3 YIITGLGNPGERYTFTRHNAGFLAIDYLAQFFNTKVDKIKFKGLVGSFEYAGKKVLLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S++E +NFYK+ E +VI+DD+ D G ++++ G D GHNG+KSI +
Sbjct: 63 MTYMNASGESIIEAVNFYKIKP-EKLIVIYDDIAFDVGVVKMRKKGSDGGHNGIKSIIQC 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + + R+RIGIG P ++++VL F E+ + I+ + + +L + +
Sbjct: 122 LGTEEFPRIRIGIGVPK--YDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDRA 179
Query: 181 LNHI 184
+N+I
Sbjct: 180 MNYI 183
>gi|289166914|ref|YP_003445181.1| peptidyl-tRNA hydrolase [Streptococcus mitis B6]
gi|288906479|emb|CBJ21309.1| peptidyl-tRNA hydrolase [Streptococcus mitis B6]
Length = 189
Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 105/169 (62%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F +++ L+G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQTDLASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRVKGSAGGHNGIKSIIQH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R++IGIGRP + ++ HVL F + +L ID + S+
Sbjct: 123 IGTQTFNRVKIGIGRPKNGMSVVHHVLSTFDKDDYIGILQSIDKVDDSV 171
>gi|239930783|ref|ZP_04687736.1| peptidyl-tRNA hydrolase [Streptomyces ghanaensis ATCC 14672]
gi|291439150|ref|ZP_06578540.1| peptidyl-tRNA hydrolase [Streptomyces ghanaensis ATCC 14672]
gi|291342045|gb|EFE69001.1| peptidyl-tRNA hydrolase [Streptomyces ghanaensis ATCC 14672]
Length = 200
Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 108/178 (60%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD-----GL 54
+++ GLGNPG EY NRHN+GFM D + +K+ K A++ EG++
Sbjct: 11 WLIVGLGNPGPEYAMNRHNVGFMVADLLAE-RMGGRFKRAGKAQAQVVEGRIGPPGPANR 69
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L KP ++MNLSG + + FYK+ + + + +HD+LD+ +G LRLK GGGD GHNG
Sbjct: 70 RVVLAKPMSYMNLSGGPVNALREFYKV-PVAHVVAVHDELDIGYGVLRLKLGGGDNGHNG 128
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G +Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 129 LKSMTKAFGADYHRVRFGIGRPPGRMQVADFVLRDFSSAERKELDYFVDRAADAVECL 186
>gi|147669215|ref|YP_001214033.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. BAV1]
gi|189038288|sp|A5FRL3|PTH_DEHSB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146270163|gb|ABQ17155.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. BAV1]
Length = 189
Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY NRHN+GF C+ R + KK + G+++ +L K
Sbjct: 1 MKLIIGLGNPGKEYSGNRHNVGFQCLSRFAKENHISFDKKCCLSRTGSGRINDEEIVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ +++ Y L + +V+ DDLDL G LRL+ GG GHNG+ SI
Sbjct: 61 PQTYMNLSGKAVNQLLRRYNLK-AADIIVVQDDLDLPAGKLRLRLGGSAGGHNGVSSIIT 119
Query: 121 KCG-KNYKRLRIGIGRPP---DTAHIIRHVLGNFSSPERYFL 158
G K + RL+IGIG+P + A ++ HVLGNF ER +
Sbjct: 120 DIGTKEFIRLKIGIGKPDARNNGAEVVDHVLGNFGGEEREII 161
>gi|322388484|ref|ZP_08062087.1| aminoacyl-tRNA hydrolase [Streptococcus infantis ATCC 700779]
gi|321140797|gb|EFX36299.1| aminoacyl-tRNA hydrolase [Streptococcus infantis ATCC 700779]
Length = 189
Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 104/169 (61%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F AE++ L+G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQAELASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIEDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + R++IGIGRP ++ HVL F + +L ID + ++
Sbjct: 123 IGTQVFNRVKIGIGRPKKGMSVVHHVLSKFDKDDYIGILQSIDKVDDAV 171
>gi|73748435|ref|YP_307674.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. CBDB1]
gi|289432482|ref|YP_003462355.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. GT]
gi|119390933|sp|Q3ZX09|PTH_DEHSC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|73660151|emb|CAI82758.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. CBDB1]
gi|288946202|gb|ADC73899.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. GT]
Length = 189
Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 97/162 (59%), Gaps = 5/162 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY NRHN+GF C+ R + KK + G+++ +L K
Sbjct: 1 MKLIIGLGNPGKEYSGNRHNVGFQCLSRFAKENHISFDKKCCLSRTGSGRINDEEIVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ +++ Y L + +V+ DDLDL G LRL+ GG GHNG+ SI
Sbjct: 61 PQTYMNLSGKAVNQLLRRYNLK-ATDIIVVQDDLDLPAGKLRLRLGGSAGGHNGVSSIIT 119
Query: 121 KCG-KNYKRLRIGIGRPP---DTAHIIRHVLGNFSSPERYFL 158
G K + RL+IGIG+P + A ++ HVLGNF ER +
Sbjct: 120 DIGTKEFIRLKIGIGKPDARNNGAEVVDHVLGNFGGEEREII 161
>gi|71064750|ref|YP_263477.1| peptidyl-tRNA hydrolase [Psychrobacter arcticus 273-4]
gi|119390984|sp|Q4FVB5|PTH_PSYA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71037735|gb|AAZ18043.1| peptidyl-tRNA hydrolase [Psychrobacter arcticus 273-4]
Length = 193
Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 99/171 (57%), Gaps = 2/171 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF + + F+ A KKFH GQ+ G L+ P
Sbjct: 5 LIVGLGNPGQEYMFTRHNAGFWFVHHLAQQFNIALAPDKKFHGVTGRGQIHGSDVRLLMP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS++ ++ FY + N E L+ HD+LD+ G+++LKT GG GHNGL+ I+
Sbjct: 65 LTFMNKSGQSVVPMVKFYGIDNDE-LLIAHDELDIPAGSIKLKTDGGHGGHNGLRDITPH 123
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G ++ RLR+GIG P + + HVL + E+ + + +LPLL
Sbjct: 124 IGNDFHRLRVGIGHPGHKSKVSGHVLSKAAPDEQIAIDSALSAAFEALPLL 174
>gi|254447715|ref|ZP_05061180.1| peptidyl-tRNA hydrolase [gamma proteobacterium HTCC5015]
gi|198262495|gb|EDY86775.1| peptidyl-tRNA hydrolase [gamma proteobacterium HTCC5015]
Length = 197
Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 94/156 (60%), Gaps = 6/156 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH---FFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG +Y E RHN GF +D + + + F P KF E + + +G L+
Sbjct: 13 MLVGLGNPGDKYTETRHNAGFWFLDEVAARYGASFRP--DSKFQGEAASIRFEGRDIRLL 70
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+S+ + FYK+P +E+ LV HD+LDLD G RLK GG GHNGL+
Sbjct: 71 KPTTFMNHSGRSISAMARFYKIP-VEHILVAHDELDLDPGVARLKRAGGHGGHNGLRDTI 129
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
GK++ RLRIGIG P ++ +VL N S ER
Sbjct: 130 AAMGKDFWRLRIGIGHPGHRDDVVGYVLKNASKSER 165
>gi|302551982|ref|ZP_07304324.1| peptidyl-tRNA hydrolase [Streptomyces viridochromogenes DSM 40736]
gi|302469600|gb|EFL32693.1| peptidyl-tRNA hydrolase [Streptomyces viridochromogenes DSM 40736]
Length = 200
Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 109/178 (61%), Gaps = 9/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLD-----GL 54
+++ GLGNPG EY NRHN+GFM D + +K+ + A++ EG++
Sbjct: 11 WLIVGLGNPGPEYAGNRHNVGFMVADLLAD-RVGGRFKRAGRAQAQVVEGRIGPPGPLNR 69
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R I+ KP ++MNLSG + + FYK+ + + + +HD+LD+D+GTLRLK GGGD GHNG
Sbjct: 70 RVIVAKPMSYMNLSGGPVNTLREFYKV-PVAHVVAVHDELDIDYGTLRLKLGGGDNGHNG 128
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKS+++ G Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 129 LKSMTKAFGSEYHRVRFGIGRPPGRMPVADFVLRDFSSVERKELDYFVDRAADAVECL 186
>gi|302836311|ref|XP_002949716.1| hypothetical protein VOLCADRAFT_59597 [Volvox carteri f.
nagariensis]
gi|300265075|gb|EFJ49268.1| hypothetical protein VOLCADRAFT_59597 [Volvox carteri f.
nagariensis]
Length = 223
Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 96/157 (61%), Gaps = 3/157 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++++ GLGNPG Y E RHN+GFM ID + K + A + +G++ G + +L+K
Sbjct: 58 LWLIVGLGNPGSNYDETRHNVGFMVIDELARQAGIDCRKLEKSAAVGKGEVHGKQVLLVK 117
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ + FY++P LV+ DDLD +R++ GG GHNGL+SI +
Sbjct: 118 PVTFMNNSGESVAALAKFYRVPP-SRVLVVSDDLDQPVAQVRIRAKGGHGGHNGLRSIID 176
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ G +++ R+++GIGRP I +VL FS ER
Sbjct: 177 RMGGAQDFPRIKVGIGRPSGPMPIATYVLQPFSKAER 213
>gi|306828592|ref|ZP_07461786.1| aminoacyl-tRNA hydrolase [Streptococcus mitis ATCC 6249]
gi|304429200|gb|EFM32286.1| aminoacyl-tRNA hydrolase [Streptococcus mitis ATCC 6249]
Length = 189
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 104/169 (61%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAIHALLTYYGL-DIEDLLVIYDDLDMEIGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + R++IGIGRP ++ HVL F + +L ID + ++
Sbjct: 123 IGTQVFNRIKIGIGRPKKGMSVVHHVLSKFDQDDYVGILQSIDKVDDAV 171
>gi|328956570|ref|YP_004373956.1| peptidyl-tRNA hydrolase [Carnobacterium sp. 17-4]
gi|328672894|gb|AEB28940.1| peptidyl-tRNA hydrolase [Carnobacterium sp. 17-4]
Length = 191
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 103/168 (61%), Gaps = 3/168 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HNIGF+ +D H K KF A +E + + +L+K
Sbjct: 1 MKMIVGLGNPGTKYKNTKHNIGFITVDEFAIQHKMEFSKTKFEALYAEAFVGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ ++M+++ + +E+ +VI+DDLDL G LRL+ G GHNG+KSI +
Sbjct: 61 PQTFMNDSGRAVRQLMDYFNV-EVEDLVVIYDDLDLPVGKLRLRQKGSAGGHNGIKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNF-SSPERYFLLPIIDNIA 166
++ R+RIGI RP +I+HVL F S L+ I D++A
Sbjct: 120 HIDTSDFNRIRIGIDRPMGKQTVIQHVLSGFHKSQHEELLITIKDSVA 167
>gi|119715157|ref|YP_922122.1| peptidyl-tRNA hydrolase [Nocardioides sp. JS614]
gi|119535818|gb|ABL80435.1| peptidyl-tRNA hydrolase [Nocardioides sp. JS614]
Length = 217
Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 106/179 (59%), Gaps = 8/179 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLD-----GL 54
+++V GLGNPG Y +RHN+G++ D + S P K AE+ EG+L G
Sbjct: 26 VWLVVGLGNPGPTYAGHRHNVGYLVADELASRLGAPFRAHKSGRAEVVEGRLGVPGQPGP 85
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L++ + +MN +G + ++ FYK+P E + +HD+LD+ F T+R+K GGGD GHNG
Sbjct: 86 RVVLMRARCYMNETGGPVKQLAGFYKVPP-ERIIAVHDELDIAFDTMRVKLGGGDNGHNG 144
Query: 115 LKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
L+S+ G ++ R+R+GIGRPP VL N+SS ER L +D A ++ L
Sbjct: 145 LRSMRSSLGTGDFYRVRVGIGRPPGRQDPADFVLSNYSSSERKVLPFQVDRAADAVEAL 203
>gi|149182809|ref|ZP_01861271.1| peptidyl-tRNA hydrolase [Bacillus sp. SG-1]
gi|148849476|gb|EDL63664.1| peptidyl-tRNA hydrolase [Bacillus sp. SG-1]
Length = 185
Score = 127 bits (319), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 106/183 (57%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF ID + P + KF + G + IL+K
Sbjct: 1 MKLIVGLGNPGSQYDHTRHNIGFEVIDELAKRFDSPLNQSKFKGVYASVHHKGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++ +M+++ + + E+ +VI+DDLDL G +RL+ G GHNG+KSI
Sbjct: 61 PLTYMNLSGESIVPLMDYFDI-DEEDLVVIYDDLDLPVGKIRLRQKGSPGGHNGMKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GI RPP + +VLG F+ ER + +I A + ++ +
Sbjct: 120 HLGTQQFNRIRVGIDRPPSGMKVPDYVLGRFTPEERETMQDVIKASADACEAWLEKPFLE 179
Query: 180 FLN 182
+N
Sbjct: 180 VMN 182
>gi|322375220|ref|ZP_08049734.1| aminoacyl-tRNA hydrolase [Streptococcus sp. C300]
gi|321280720|gb|EFX57759.1| aminoacyl-tRNA hydrolase [Streptococcus sp. C300]
Length = 189
Score = 127 bits (319), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 104/169 (61%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + R++IGIGRP ++ HVL F + +L ID + ++
Sbjct: 123 IGTQVFNRIKIGIGRPKKGMSVVHHVLSKFDQDDYVGILQSIDKVDDAV 171
>gi|256848381|ref|ZP_05553824.1| peptidyl-tRNA hydrolase [Lactobacillus coleohominis 101-4-CHN]
gi|256714979|gb|EEU29957.1| peptidyl-tRNA hydrolase [Lactobacillus coleohominis 101-4-CHN]
Length = 187
Score = 127 bits (319), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 100/158 (63%), Gaps = 5/158 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTIL 58
M ++ GLGN G Y E RHN GFM ++++ + A+K K A + G +DG + +L
Sbjct: 1 MKMIVGLGNVGTRYDETRHNTGFMVVEQLARDYHLGAFKHAKNIEAVVVSGMIDGQKVML 60
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP TFMN SG+++ +M++Y +P LE+ +V++DDLD+ G +RLKT G GHNGLKSI
Sbjct: 61 VKPTTFMNDSGRAVKPLMDYYDIP-LEDMVVVNDDLDMPVGKVRLKTHGKSGGHNGLKSI 119
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + + R+++GI P ++ HVLG FS ER
Sbjct: 120 IHYIGTDKFNRVKLGIDHPAHGT-VVSHVLGKFSKDER 156
>gi|224438055|ref|ZP_03658994.1| peptidyl-tRNA hydrolase [Helicobacter cinaedi CCUG 18818]
gi|313144500|ref|ZP_07806693.1| peptidyl-tRNA hydrolase [Helicobacter cinaedi CCUG 18818]
gi|313129531|gb|EFR47148.1| peptidyl-tRNA hydrolase [Helicobacter cinaedi CCUG 18818]
Length = 243
Score = 127 bits (319), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 95/153 (62%), Gaps = 5/153 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN+GFM +D + + F A+ KKF+AE+ + +KP
Sbjct: 5 LIVGLGNPGVKYEKTRHNVGFMVLDFLSKALGFDFAFDKKFNAELGILKAYNQTLYFLKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ +++L ++ LVIHD+LD+ FG +R K G GHNGLKSI
Sbjct: 65 QTFMNLSGESVAPFARYFQLSSV---LVIHDELDIPFGDIRFKFAGSSGGHNGLKSIDNT 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G Y RLR GIGR T ++ +VL +FS E
Sbjct: 122 MGNEYVRLRFGIGRSA-TQSVVDYVLSDFSLQE 153
>gi|323701606|ref|ZP_08113278.1| peptidyl-tRNA hydrolase [Desulfotomaculum nigrificans DSM 574]
gi|323533379|gb|EGB23246.1| peptidyl-tRNA hydrolase [Desulfotomaculum nigrificans DSM 574]
Length = 200
Score = 127 bits (319), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 97/163 (59%), Gaps = 4/163 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY + RHNIGFM ID + K + A + L + IL K
Sbjct: 1 MKLIVGLGNPGPEYAKTRHNIGFMVIDALARDLGIVVEKNQHKALTGQAYLGREKLILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQ+++ +MN+YKL ++ LVI+DD+DL G LR++ G G G+KSI E
Sbjct: 61 PQTYMNLSGQAVVALMNWYKLQPVD-LLVIYDDMDLPPGRLRIRQSGSAGGQKGMKSIIE 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
G + + R+++GIGRP A I HVLG E + P I
Sbjct: 120 LLGTQEFTRMKVGIGRPEHGA--IDHVLGKIDDQEAALINPAI 160
>gi|319934922|ref|ZP_08009367.1| peptidyl-tRNA hydrolase [Coprobacillus sp. 29_1]
gi|319810299|gb|EFW06661.1| peptidyl-tRNA hydrolase [Coprobacillus sp. 29_1]
Length = 184
Score = 127 bits (319), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 103/165 (62%), Gaps = 7/165 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GFM +DR+ KF E + + G IL+K
Sbjct: 1 MKLIVGLGNPGKDYENTRHNVGFMVMDRLSDVMNVSISTTKFKGEYVKFKYHGEDVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ +VM+++K+ ++E+ LV++DD+D+ G LRL+ G GHNG+KSI
Sbjct: 61 PMTYMNNSGESVRQVMDYFKI-DVEDLLVVYDDMDMPVGKLRLRQSGSAGGHNGVKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G ++++R+R+GI + P ++ +VLG F E+ P+ID
Sbjct: 120 HVGTQSFQRIRVGIDKHP-RIKVVDYVLGRFQKDEQ----PLIDQ 159
>gi|160878271|ref|YP_001557239.1| aminoacyl-tRNA hydrolase [Clostridium phytofermentans ISDg]
gi|189038285|sp|A9KR32|PTH_CLOPH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|160426937|gb|ABX40500.1| Aminoacyl-tRNA hydrolase [Clostridium phytofermentans ISDg]
Length = 191
Score = 127 bits (319), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 102/173 (58%), Gaps = 2/173 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNP EY RHNIGF I R+ + KK A +G + G + IL K
Sbjct: 1 MYIIIGLGNPTREYEATRHNIGFDAITRLADDNNISLDTKKHKAICGKGMIGGEKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E+++FYK+ E +VI+DD+ LD G LR++T G GHNG+K+I
Sbjct: 61 PQTYMNLSGESVRELIDFYKVTK-EEIIVIYDDISLDVGQLRIRTKGSAGGHNGIKNIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + + R++IG+G P + +VL F E + ++ ++++ +
Sbjct: 120 HLGSDEFCRIKIGVGDKPKNWDLADYVLARFPKEEEPAIREALEKVSKACETI 172
>gi|266619806|ref|ZP_06112741.1| aminoacyl-tRNA hydrolase [Clostridium hathewayi DSM 13479]
gi|288868592|gb|EFD00891.1| aminoacyl-tRNA hydrolase [Clostridium hathewayi DSM 13479]
Length = 192
Score = 127 bits (319), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 2/184 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNP EY + RHN+GF ID + +KK A +G + G + IL K
Sbjct: 1 MYLIAGLGNPTREYEKTRHNVGFEAIDILADKAGTTVTEKKHKALYGKGYIGGQKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E+ +FYK+ EN +++ DD++L G LR++ G GHNGLK+I
Sbjct: 61 PQTYMNLSGESIREIADFYKI-EPENIIILCDDINLSEGQLRIRLKGSAGGHNGLKNIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+RIG+G P + +VLG F ++ + + A + ++ + +
Sbjct: 120 HLGTQEFPRIRIGVGEKPRGMDLADYVLGRFPKEQQAVMEEAYRDAADAACMMIEEGADA 179
Query: 180 FLNH 183
+NH
Sbjct: 180 AMNH 183
>gi|315612155|ref|ZP_07887070.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis ATCC 49296]
gi|315315716|gb|EFU63753.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis ATCC 49296]
Length = 189
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ +G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFSFNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + R++IGIGRP ++ HVL F + +L ID + ++
Sbjct: 123 IGTQVFNRVKIGIGRPKKGMSVVHHVLSKFDQDDYVGILQSIDKVDDAV 171
>gi|22536192|ref|NP_687043.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae 2603V/R]
gi|25010082|ref|NP_734477.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae NEM316]
gi|77414473|ref|ZP_00790623.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae 515]
gi|46576816|sp|Q8E2I1|PTH_STRA5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|46576817|sp|Q8E7Y8|PTH_STRA3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|22533009|gb|AAM98915.1|AE014191_7 peptidyl-tRNA hydrolase [Streptococcus agalactiae 2603V/R]
gi|23094433|emb|CAD45652.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159483|gb|EAO70644.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae 515]
Length = 191
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 102/177 (57%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HNIGFM +DRI K F AEI ++G + IKP
Sbjct: 4 MIVGLGNPGSKYNDTKHNIGFMAVDRIVKDLDVNFTEDKNFKAEIGSDFINGEKIYFIKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + +++ ++I+DDLD++ G +R + G GHNG+KSI
Sbjct: 64 TTFMNNSGIAVKALLTYYNIS-IKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R+++GIGRP +I HVLG F + +L +D + ++ + D
Sbjct: 123 LGTQEFDRIKVGIGRPNGRMTVINHVLGKFDKNDEIMILNTLDKVDNAVNYYLQTND 179
>gi|32266994|ref|NP_861026.1| peptidyl-tRNA hydrolase [Helicobacter hepaticus ATCC 51449]
gi|46576744|sp|Q7VG29|PTH_HELHP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|32263046|gb|AAP78092.1| peptidyl-tRNA hydrolase [Helicobacter hepaticus ATCC 51449]
Length = 223
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 97/154 (62%), Gaps = 5/154 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+VAGLGNP +Y RHNIGFM +D + F ++ KKF+AE+ + + +KP
Sbjct: 5 LVAGLGNPSAKYQNTRHNIGFMVLDFLSKELDFDFSFDKKFNAEVGAINIGPHKVFFLKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+++ + ++ ++ + VIHDD+D+ FG +R K GG GHNGLKSI
Sbjct: 65 QTFMNLSGEAINPFVRYF---DITHTFVIHDDIDIGFGDMRFKYGGSSGGHNGLKSIDSF 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G Y RLR G+GR + +++ +VL +F++ ER
Sbjct: 122 MGDTYFRLRFGVGRSAN-KNVVEYVLSDFNAQER 154
>gi|16331675|ref|NP_442403.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
gi|2499989|sp|Q59989|PTH_SYNY3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|1001232|dbj|BAA10473.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
Length = 194
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 9/165 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW--KKKFHAEISEGQLDGLRTILIK 60
++ GLGNP +Y + RHNIGF +D + + + +W K+F EG + G +T L+K
Sbjct: 5 LIVGLGNPEPKYDQTRHNIGFAVVDAL-AITWQCSWYDHKRFQGWFGEGLMAGQKTCLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MN SGQ++ V+++YKL + ++ LV++DD+DL G LRL+ G GHNG+KS+
Sbjct: 64 PRTYMNRSGQAVRAVVDWYKL-DPQSVLVVYDDMDLPLGRLRLRQTGSAGGHNGMKSLIS 122
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G +++ RLR+GIG+ + I HVLG FS E LPI++
Sbjct: 123 HLGTQDFPRLRLGIGKSDGSKDTIAHVLGKFSPSE----LPIVEK 163
>gi|149007711|ref|ZP_01831320.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP18-BS74]
gi|149020163|ref|ZP_01835137.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP23-BS72]
gi|225860051|ref|YP_002741560.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae Taiwan19F-14]
gi|298229484|ref|ZP_06963165.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255134|ref|ZP_06978720.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298501795|ref|YP_003723735.1| aminoacyl-tRNA hydrolase [Streptococcus pneumoniae TCH8431/19A]
gi|307126179|ref|YP_003878210.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae 670-6B]
gi|254783894|sp|C1CNN8|PTH_STRZT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|147760706|gb|EDK67678.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP18-BS74]
gi|147930841|gb|EDK81822.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP23-BS72]
gi|225727390|gb|ACO23241.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae Taiwan19F-14]
gi|298237390|gb|ADI68521.1| aminoacyl-tRNA hydrolase [Streptococcus pneumoniae TCH8431/19A]
gi|306483241|gb|ADM90110.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae 670-6B]
gi|327388990|gb|EGE87338.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae GA04375]
gi|332071327|gb|EGI81822.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae GA17545]
Length = 189
Score = 127 bits (318), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 105/169 (62%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++++ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + R++IGIGRP + ++ HVL F E +L +D + S+
Sbjct: 123 IGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDRDEYIGILQSVDKVDDSV 171
>gi|75910645|ref|YP_324941.1| peptidyl-tRNA hydrolase [Anabaena variabilis ATCC 29413]
gi|119390911|sp|Q3M4P0|PTH_ANAVT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|75704370|gb|ABA24046.1| peptidyl-tRNA hydrolase [Anabaena variabilis ATCC 29413]
Length = 213
Score = 127 bits (318), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 9/181 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQL-DGLRTILIK 60
++ GLGNP +Y + RHNIGF +D + +++ A +KF + EG G++ L+K
Sbjct: 15 LIVGLGNPEPKYDQTRHNIGFAAVDALARAWNISLAENRKFQGQYGEGTAPGGVKIRLLK 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MN SGQ++ V ++YKL E+ LVI+DDLDL G RL+ G GHNG+KS I+
Sbjct: 75 PLTYMNRSGQAIQAVTSWYKLSG-ESVLVIYDDLDLPLGKTRLRLSGSAGGHNGMKSAIA 133
Query: 120 EKCGKNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+N+ RLRIGIG+P D + + HVLG FS+ E + ++ + + L K
Sbjct: 134 HLSTQNFPRLRIGIGKPKNAVNGDNSETVSHVLGKFSATETQLMSLVLQFVVECVELSLK 193
Query: 175 R 175
+
Sbjct: 194 Q 194
>gi|15807362|ref|NP_296093.1| peptidyl-tRNA hydrolase [Deinococcus radiodurans R1]
gi|14195089|sp|Q9RRW3|PTH_DEIRA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|6460187|gb|AAF11918.1|AE002068_1 peptidyl-tRNA hydrolase [Deinococcus radiodurans R1]
Length = 215
Score = 127 bits (318), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 98/166 (59%), Gaps = 6/166 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE---GQLDGLRTI 57
M ++ GLGNPG +Y + RHN+G++ +D + + +W+K AE+ E G G + +
Sbjct: 1 MKLIVGLGNPGEKYAQTRHNVGWLVVDEL-ARRAGGSWRKDGEAEVCEVRLGTAPGEKVL 59
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KPQTFMN SG+++ +M+FYKL E LV+ DDLD FG LR + GG G NG++
Sbjct: 60 LVKPQTFMNTSGKAVWPLMSFYKLEG-EQLLVVQDDLDSPFGLLRFRLGGRHGGQNGVRD 118
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
I + G + + RL+IGI RPP VL + ER L ++
Sbjct: 119 IIARLGYDRFPRLKIGISRPPAGRDPADWVLSKWRDEERETLAELV 164
>gi|150388005|ref|YP_001318054.1| peptidyl-tRNA hydrolase [Alkaliphilus metalliredigens QYMF]
gi|167011987|sp|A6TJM7|PTH_ALKMQ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|149947867|gb|ABR46395.1| Aminoacyl-tRNA hydrolase [Alkaliphilus metalliredigens QYMF]
Length = 185
Score = 127 bits (318), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNPG +Y RHN+GF ID + K K A E ++ G + IL K
Sbjct: 1 MYIIVGLGNPGKKYSGTRHNVGFDVIDLLAHRLGITVNKLKHKALYGEARIGGEKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
PQTFMNLSG+S+ E+M FYK+ + EN +VI+DD+D+ G+LR++ G HNG+KS I
Sbjct: 61 PQTFMNLSGESIREMMQFYKI-DPENLIVIYDDIDVKVGSLRIRQSGSAGTHNGMKSTIY 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ + R+RIG+GR P+ + +VLG+F+ E
Sbjct: 120 QLQTDAFPRIRIGVGR-PEFGDLSNYVLGSFTKDE 153
>gi|160931463|ref|ZP_02078859.1| hypothetical protein CLOLEP_00296 [Clostridium leptum DSM 753]
gi|156869528|gb|EDO62900.1| hypothetical protein CLOLEP_00296 [Clostridium leptum DSM 753]
Length = 207
Score = 127 bits (318), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
IVAGLGNPG EY RHN GF+ +D+I + K+ + ++ L G R +L+KPQ
Sbjct: 23 IVAGLGNPGREYENTRHNAGFLVLDQIAGSCGVRLDRLKYKSLCADAVLGGRRVLLMKPQ 82
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSGQ++ E M FYKLP E +VI DD+ L+ G LR++ G D GHNG+K+I
Sbjct: 83 TFMNLSGQAVTEAMRFYKLP-AEKVIVIFDDISLEPGKLRIRRKGSDGGHNGIKNIIYLS 141
Query: 123 GKN-YKRLRIGIGRPPDTAH-IIRHVLGNFSSPER 155
GK+ + R+++G+G+ P + + VL F+ E+
Sbjct: 142 GKDTFPRIKMGVGKKPRPDYNLADWVLSRFTQQEQ 176
>gi|295401982|ref|ZP_06811944.1| peptidyl-tRNA hydrolase [Geobacillus thermoglucosidasius C56-YS93]
gi|312109200|ref|YP_003987516.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y4.1MC1]
gi|294975984|gb|EFG51600.1| peptidyl-tRNA hydrolase [Geobacillus thermoglucosidasius C56-YS93]
gi|311214301|gb|ADP72905.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y4.1MC1]
Length = 187
Score = 127 bits (318), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 103/179 (57%), Gaps = 5/179 (2%)
Query: 5 AGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTF 64
GLGNPG EY + RHN+GFM ID + KF+ I+ + G + IL KP T+
Sbjct: 6 VGLGNPGKEYEQTRHNVGFMVIDELAKRWNISFQTAKFNGMIASHIISGEKVILCKPLTY 65
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG- 123
MNLSG+ + ++++Y++ ++ + +VI+DDLDL G +RL+ G GHNG+KS+ G
Sbjct: 66 MNLSGECVRPLIDYYRI-DINDVVVIYDDLDLPVGKIRLRMKGSAGGHNGIKSLIHHLGT 124
Query: 124 KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
+ +KR+RIGIGRP +I +VLG F E I++ I RS K FL
Sbjct: 125 QEFKRIRIGIGRPASGEKVIDYVLGRFHEEESG---AIMEAILRSADACEKAVTEPFLQ 180
>gi|323126265|gb|ADX23562.1| peptidyl-tRNA hydrolase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 189
Score = 127 bits (318), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 104/169 (61%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HNIGFM +D+ ++ K F A+I ++ + +KP
Sbjct: 4 MIVGLGNPGSKYEKTKHNIGFMAVDKLVNKLDVTFTEDKNFKAQIGSAFINHEKIYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + +E+ +VI+DDLD++ G LRL+ G GHNG+KSI +
Sbjct: 64 TTFMNNSGVAVKALLTYYNIA-IEDLIVIYDDLDMEVGKLRLRAKGSAGGHNGIKSIIAQ 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R+++GIGRP +I HV+G+FS+ + + +D + ++
Sbjct: 123 LGTQEFDRIKVGIGRPLKGMTVINHVMGHFSTEDNIAIALTLDKVVNAV 171
>gi|225181559|ref|ZP_03735001.1| Aminoacyl-tRNA hydrolase [Dethiobacter alkaliphilus AHT 1]
gi|225167807|gb|EEG76616.1| Aminoacyl-tRNA hydrolase [Dethiobacter alkaliphilus AHT 1]
Length = 200
Score = 127 bits (318), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 101/176 (57%), Gaps = 3/176 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+ GLGNPG +Y RHN GF +DRI + P +K HA +G L G +L K
Sbjct: 1 MKIILGLGNPGPKYLTTRHNAGFRTVDRISTAAKIPLYKMGQHAFWGKGSLGGQEVVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG + + + + ++ LV++DDLDL GTLRL+ GG GHNGLKSI+
Sbjct: 61 PMTYMNNSGLAAAALCKAFG-ASPQDLLVVYDDLDLPPGTLRLRPQGGTGGHNGLKSITY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
K++ R+RIGIGR + A ++ +VL FS E L ++D R+ L K
Sbjct: 120 HLQTKDFPRMRIGIGRSEEIA-VVDYVLQEFSPQEEAMLEDVLDMAIRAATLFVKE 174
>gi|300864784|ref|ZP_07109634.1| Peptidyl-tRNA hydrolase [Oscillatoria sp. PCC 6506]
gi|300337188|emb|CBN54782.1| Peptidyl-tRNA hydrolase [Oscillatoria sp. PCC 6506]
Length = 211
Score = 127 bits (318), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 109/181 (60%), Gaps = 11/181 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEG---QLDGLRTIL 58
++ GLGNP +Y RHNIGF +D + +S+ + +KF AE EG Q + +R L
Sbjct: 15 LIVGLGNPEPKYNRTRHNIGFAAVDALANSWQISLSENRKFQAEFGEGMGPQREKIR--L 72
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSGQ++ +++YKLP E+ L ++DD+DL G LRL+ G GHNG+KS
Sbjct: 73 LKPLTYMNLSGQAIRAAIDWYKLPP-ESVLAVYDDMDLPVGRLRLRLSGSAGGHNGMKSA 131
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAH---IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G + + RLRIGIG+P +++ I HVLG FS E + ++ + ++ L K
Sbjct: 132 IAHLGTDKFPRLRIGIGKPQSSSNDKETISHVLGKFSLEESQLMDKVLKLVVEAVELSQK 191
Query: 175 R 175
+
Sbjct: 192 Q 192
>gi|225455878|ref|XP_002275254.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 205
Score = 127 bits (318), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 107/193 (55%), Gaps = 6/193 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D I F + +G + + +L KP
Sbjct: 11 WLLVGLGNPGKKYNGTRHNVGFEMVDAIAEAEGISISSVSFKSLFGKGFIGNVPVMLAKP 70
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFMN+SG+S+ ++++YK+P L+ LVI DDLDL F LRL GG GHNG++S+ +
Sbjct: 71 QTFMNVSGESVGAIVSYYKIP-LKQVLVIFDDLDLPFSKLRLLPKGGHGGHNGMRSVIDH 129
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN---IARSLPLLAKRE 176
K +++ RLRIGIGRPP VL FS ER L N R L L +
Sbjct: 130 FKGSRDFPRLRIGIGRPPGKMDTANFVLSPFSKREREELDFTFQNGVEAVRILLLEGFNK 189
Query: 177 DVSFLNHIVSVRK 189
SF+N S+ +
Sbjct: 190 SASFVNTAKSLEQ 202
>gi|17228339|ref|NP_484887.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7120]
gi|21263848|sp|Q8YYK4|PTH_ANASP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|17130189|dbj|BAB72801.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7120]
Length = 203
Score = 127 bits (318), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 9/181 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQL-DGLRTILIK 60
++ GLGNP +Y + RHNIGF +D + +++ A +KF + EG G++ L+K
Sbjct: 5 LIVGLGNPEPKYDQTRHNIGFAAVDALARAWNISLAENRKFQGQYGEGTAPGGVKIRLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MN SGQ++ V ++YKL E+ LVI+DDLDL G RL+ G GHNG+KS I+
Sbjct: 65 PLTYMNRSGQAIQAVTSWYKLSG-ESVLVIYDDLDLPLGKTRLRLSGSAGGHNGMKSAIA 123
Query: 120 EKCGKNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+N+ RLRIGIG+P D + + HVLG FS+ E + ++ + + L K
Sbjct: 124 HLSTQNFPRLRIGIGKPKNAVNGDNSETVSHVLGKFSATETQLMSLVLQFVVECVELSLK 183
Query: 175 R 175
+
Sbjct: 184 Q 184
>gi|94264422|ref|ZP_01288212.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
gi|93455179|gb|EAT05397.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
Length = 196
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 112/191 (58%), Gaps = 3/191 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M +VAGLGNPG +Y + RHNIGF+ ID + H + K+ A G L G +L+
Sbjct: 1 MRLVAGLGNPGAKYEDTRHNIGFLFIDHLARRHGISLKEESKWEAASGRGTLWGQPVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+++ + FY++ E V HD+LDL FG+ R+ G G GHNG++S+
Sbjct: 61 KPLTYMNLSGRAVGRLARFYRI-EAEAVAVFHDELDLPFGSARVAKGRGAGGHNGVRSLI 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G +++ R R+G+GRPP+ +VL +FS ER L + + L LL R++
Sbjct: 120 DHLGSRDFVRFRLGVGRPPEQHPTAGYVLSSFSPAERQALPDLFALLEEGLQLLLTRDEK 179
Query: 179 SFLNHIVSVRK 189
+ +N I + K
Sbjct: 180 AAMNLINATTK 190
>gi|108757656|ref|YP_633231.1| peptidyl-tRNA hydrolase [Myxococcus xanthus DK 1622]
gi|119390966|sp|Q1D292|PTH_MYXXD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|108461536|gb|ABF86721.1| peptidyl-tRNA hydrolase [Myxococcus xanthus DK 1622]
Length = 191
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 116/183 (63%), Gaps = 6/183 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY +RHNIGFM ++ + S ++KF A++ +G L G R + ++
Sbjct: 1 MKLIVGLGNPGREYERHRHNIGFMVVEALLSRARAQLNQEKFAAKVGQGTLAGERVLFVE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E F+K+P + + LVIHD+LDL G L+LK GGG GHNGLKSI
Sbjct: 61 PQTFMNLSGRSVAEAARFFKVP-VADVLVIHDELDLPLGRLQLKAGGGSGGHNGLKSIVS 119
Query: 121 KCG-KNYKRLRIGIGRP--PDT-AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G +++ RLR GIG+P P+ + +VL NF ER + +ID A + L RE
Sbjct: 120 SLGDESFIRLRFGIGKPEGPNARERVSDYVLSNFDDGERREMDALIDR-AMDMTELWIRE 178
Query: 177 DVS 179
+S
Sbjct: 179 GLS 181
>gi|139439413|ref|ZP_01772854.1| Hypothetical protein COLAER_01874 [Collinsella aerofaciens ATCC
25986]
gi|133775192|gb|EBA39012.1| Hypothetical protein COLAER_01874 [Collinsella aerofaciens ATCC
25986]
Length = 209
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 95/160 (59%), Gaps = 9/160 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEIS-------EGQLDGLR 55
+VAGLGNPG EY E RHN GF ID + WK + AE++ E + +
Sbjct: 11 MVAGLGNPGEEYAETRHNAGFKAIDELARQAGVTYWKNQAGAEVALININDPEEEGGKRQ 70
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L+KPQ++MN SG + ++ YK+ E LVIHD+LD+ G +R+K GGG AGHNGL
Sbjct: 71 IVLVKPQSYMNTSGGPISKLCREYKI-KAEELLVIHDELDIPAGDVRVKVGGGHAGHNGL 129
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+SI +K G +++ R+R GIG PP + +VL + E
Sbjct: 130 RSIIDKMGSRDFSRIRTGIGNPPGKMAVADYVLKQLRARE 169
>gi|291541699|emb|CBL14809.1| peptidyl-tRNA hydrolase [Ruminococcus bromii L2-63]
Length = 197
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 104/173 (60%), Gaps = 3/173 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+IV GLGNP +Y RHN G++ IDRI K K+ + I ++G + +L+KP
Sbjct: 13 YIVVGLGNPDRKYENTRHNAGWLAIDRIADKLGCDVNKIKYKSFIGTCTVNGAKVMLMKP 72
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ+++E MNFYK+P EN +VI DD+ LD G +R+++ G D G G++SI
Sbjct: 73 TTYMNNSGQAVVEAMNFYKIP-PENVIVIFDDISLDVGKMRIRSKGSDGGQRGMRSIIYL 131
Query: 122 CGKN-YKRLRIGIGRPPD-TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + + R+++GIG P+ + VL F+S E L I DN +++ L+
Sbjct: 132 SGSDKFPRIKVGIGAKPNPDWDLADWVLSKFTSDEMKKLDEIFDNAEKAIELI 184
>gi|289547988|ref|YP_003472976.1| peptidyl-tRNA hydrolase [Thermocrinis albus DSM 14484]
gi|289181605|gb|ADC88849.1| peptidyl-tRNA hydrolase [Thermocrinis albus DSM 14484]
Length = 190
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
V GLGNPG EY RHN+GFM +D++ S + ++ + + ++ G L+KPQT
Sbjct: 5 VVGLGNPGKEYERTRHNVGFMVLDQLVSRLRVRDYTEECLSHLYRAKVGGREVFLVKPQT 64
Query: 64 FMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-ISEK 121
+MN SG ++ ++ Y+ LP E LV+HDDLDL G +RL+T G GH+G++S I E
Sbjct: 65 YMNNSGLAVFNLLEDYQILP--EELLVVHDDLDLPLGKMRLRTEGSSGGHHGVESIIREI 122
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ + RL+IGIGRP D + ++++VL FS E LL +++ +
Sbjct: 123 KTERFPRLKIGIGRPKDKSKVVQYVLSPFSKEEEPILLKVLERATECI 170
>gi|295687988|ref|YP_003591681.1| peptidyl-tRNA hydrolase [Caulobacter segnis ATCC 21756]
gi|295429891|gb|ADG09063.1| peptidyl-tRNA hydrolase [Caulobacter segnis ATCC 21756]
Length = 206
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 118/189 (62%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL---DG-LRT 56
M I+AGLGNP +Y +NRHN+GFM +D + W+ +F EGQ+ DG ++
Sbjct: 1 MLILAGLGNPEPKYEKNRHNVGFMAVDALARKWGTAPWRARFQGLACEGQVSTPDGPVKL 60
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L+KP+T+ N SG+++ E M F+KL + +V HD++D+ G R+K GGG AG+NG++
Sbjct: 61 LLLKPKTYYNESGRAVGEAMKFFKL-KPADVIVFHDEIDMAPGRFRMKAGGGAAGNNGIR 119
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
S++ + G ++R RIG+G P ++ +VLG+F E +L P++D IA +LP A +
Sbjct: 120 SVTSQVGDAFRRGRIGVGHPGHKDAVMHYVLGDFHKVEHQWLDPMLDAIADALPFAAVGD 179
Query: 177 DVSFLNHIV 185
D + ++
Sbjct: 180 DERYQAEVM 188
>gi|257888640|ref|ZP_05668293.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,141,733]
gi|257897405|ref|ZP_05677058.1| peptidyl-tRNA hydrolase [Enterococcus faecium Com12]
gi|257824694|gb|EEV51626.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,141,733]
gi|257833970|gb|EEV60391.1| peptidyl-tRNA hydrolase [Enterococcus faecium Com12]
Length = 186
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HNIGFM +D+I H K F AE++E +G + +L+K
Sbjct: 1 MKMIVGLGNPGTKYQYTKHNIGFMVVDQIAREHQAAFKKNPFEAEVAEFFHNGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M ++ + E +VI+DDLDL G +RL+ G GHNG+KSI
Sbjct: 61 PQTFMNESGRAVGPLMTYFGI-YPEELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFS 151
N + R+++GIGRP +++HVL FS
Sbjct: 120 HLNTNVFDRIKVGIGRPEGKKTVVQHVLSPFS 151
>gi|300871524|ref|YP_003786397.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli 95/1000]
gi|300689225|gb|ADK31896.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli 95/1000]
Length = 198
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 97/154 (62%), Gaps = 2/154 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+V GLGNPG EY +RHNIGF+ ID++ K + + +L+ IL+KPQ
Sbjct: 4 LVIGLGNPGEEYKNHRHNIGFIIIDKLAQNLSLKFDNNKKKSLFTRAKLNNTDFILLKPQ 63
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-ISEK 121
TFMNLSG+S + + F+ + E+ +VI+DD+D+ FGT ++K GG GHNG+KS I++
Sbjct: 64 TFMNLSGESAIYISKFFNIK-PEDIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLIAQL 122
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
++ RLR+GIGRP + +VL +FS ER
Sbjct: 123 QTDDFIRLRVGIGRPSFGKKVNDYVLSSFSKSER 156
>gi|312134558|ref|YP_004001896.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor owensensis OL]
gi|311774609|gb|ADQ04096.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor owensensis OL]
Length = 189
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 4/184 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+AGLGNPG Y RHN GF+ ID + F K KF + + G + +L+KP
Sbjct: 3 YIIAGLGNPGDRYTFTRHNAGFLTIDYLAQFFNTKVDKIKFKGLVGSFEYAGKKVLLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S+ E +NFYK+ E +VI+DD+ D G ++++ G D GHNG+KSI +
Sbjct: 63 MTYMNASGESIKEAVNFYKIKP-EKLIVIYDDIAFDVGIVKMRKKGSDGGHNGVKSIIQC 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + + R+RIGIG P ++++VL F E+ + I+ + + +L + +
Sbjct: 122 LGTEEFPRIRIGIGIPK--YDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDRA 179
Query: 181 LNHI 184
+N+I
Sbjct: 180 MNYI 183
>gi|291546532|emb|CBL19640.1| peptidyl-tRNA hydrolase [Ruminococcus sp. SR1/5]
Length = 192
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 105/173 (60%), Gaps = 1/173 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y RHN+GF +D + H P KF+A +G + G + IL+K
Sbjct: 1 MYLIAGLGNPGKQYEATRHNMGFDTVDCLVEKHNIPQGGVKFNAMYGKGIIGGEKAILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P ++MNLSG + E+ ++K+ +VI+DD+DL+ G LR++ G GHNG+K I
Sbjct: 61 PLSYMNLSGGPIQEMSGYFKIDPETELIVIYDDIDLEPGQLRIRKKGSAGGHNGIKDIIR 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ G + + R+R+G+G P + VLG+FS +R + I++ A ++ ++
Sbjct: 121 RLGTEKFIRIRVGVGAKPKDWDLADFVLGHFSDSDRKLVDEGINDAAEAVEMI 173
>gi|160939695|ref|ZP_02087043.1| hypothetical protein CLOBOL_04587 [Clostridium bolteae ATCC
BAA-613]
gi|158437486|gb|EDP15250.1| hypothetical protein CLOBOL_04587 [Clostridium bolteae ATCC
BAA-613]
Length = 230
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 106/184 (57%), Gaps = 2/184 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNP EY + RHN+GF ID + +KKF G + G + +L+K
Sbjct: 42 MYIIAGLGNPTREYEKTRHNVGFEVIDVLADRLGTTVEEKKFKGCYGRGIIGGQKVLLLK 101
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ +FYK+ + E+ ++++DD+ LD G LR++ G GHNG+K+I
Sbjct: 102 PQTFMNLSGESVRAAADFYKV-DPEHIIIVYDDISLDVGQLRIRKKGSAGGHNGIKNIIS 160
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G P + +VL FS +R + A ++ ++ + +
Sbjct: 161 HLGTQEFPRIKVGVGDKPKKMDLADYVLSRFSKEDRAVMEDAFREAAGAVEMMITQGADA 220
Query: 180 FLNH 183
+N
Sbjct: 221 AMNQ 224
>gi|15902049|ref|NP_357599.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae R6]
gi|116515731|ref|YP_815426.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae D39]
gi|168484303|ref|ZP_02709255.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CDC1873-00]
gi|168491775|ref|ZP_02715918.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CDC0288-04]
gi|46576814|sp|Q8DRQ2|PTH_STRR6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|122279574|sp|Q04N59|PTH_STRP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|15457533|gb|AAK98809.1| Peptidyl-tRNA hydrolase [Streptococcus pneumoniae R6]
gi|116076307|gb|ABJ54027.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae D39]
gi|172042402|gb|EDT50448.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CDC1873-00]
gi|183573988|gb|EDT94516.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CDC0288-04]
Length = 189
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 105/169 (62%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++++ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + R++IGIGRP + ++ HVL F + +L ID + S+
Sbjct: 123 IGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDRDDYIGILQSIDKVDDSV 171
>gi|331265443|ref|YP_004325073.1| peptidyl-tRNA hydrolase [Streptococcus oralis Uo5]
gi|326682115|emb|CBY99731.1| peptidyl-tRNA hydrolase [Streptococcus oralis Uo5]
Length = 189
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 104/169 (61%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ ++G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFINGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + R++IGIGRP ++ HVL F + +L ID + ++
Sbjct: 123 IGTQVFNRVKIGIGRPKKGMSVVHHVLSKFDQDDYVGVLQSIDKVDDAV 171
>gi|227501527|ref|ZP_03931576.1| peptidyl-tRNA hydrolase [Corynebacterium accolens ATCC 49725]
gi|227077552|gb|EEI15515.1| peptidyl-tRNA hydrolase [Corynebacterium accolens ATCC 49725]
Length = 177
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 101/167 (60%), Gaps = 12/167 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLRT 56
+V GLGNPG +Y RHNIGF D + SF KK + E++EG L G +
Sbjct: 4 LLVVGLGNPGPKYSGTRHNIGFDVADELAGELMSSFSVH----KKTNTEVAEGMLSGRKV 59
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
I KP++FMNLSG + + ++ L + +V+HD+L+ DFGT++L+ GGGD GHNGL+
Sbjct: 60 ICAKPRSFMNLSGGPIKALAQYFHLAP-ADIVVVHDELEFDFGTVKLRQGGGDHGHNGLR 118
Query: 117 SISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
S ++ G K+Y+RL IGIGRPP VL +S E+ +PI+
Sbjct: 119 STTKSLGTKDYQRLSIGIGRPPGRMDPASFVLKPWSKQEK-VEIPIL 164
>gi|149003145|ref|ZP_01828054.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP14-BS69]
gi|221230953|ref|YP_002510105.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae ATCC 700669]
gi|225853616|ref|YP_002735128.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae JJA]
gi|237651084|ref|ZP_04525336.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CCRI 1974]
gi|237821197|ref|ZP_04597042.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CCRI 1974M2]
gi|254783890|sp|B8ZJI3|PTH_STRPJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783892|sp|C1CH85|PTH_STRZJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|147758886|gb|EDK65882.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP14-BS69]
gi|220673413|emb|CAR67871.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae ATCC 700669]
gi|225723480|gb|ACO19333.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae JJA]
Length = 189
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 105/169 (62%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++++ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + R++IGIGRP + ++ HVL F + +L ID + S+
Sbjct: 123 IGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDRDDYIGILQSIDKVDDSV 171
>gi|69245442|ref|ZP_00603437.1| Peptidyl-tRNA hydrolase [Enterococcus faecium DO]
gi|257879853|ref|ZP_05659506.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,230,933]
gi|257882579|ref|ZP_05662232.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,502]
gi|257886023|ref|ZP_05665676.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,501]
gi|257891694|ref|ZP_05671347.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,410]
gi|258614281|ref|ZP_05712051.1| peptidyl-tRNA hydrolase [Enterococcus faecium DO]
gi|260559526|ref|ZP_05831707.1| peptidyl-tRNA hydrolase [Enterococcus faecium C68]
gi|261206677|ref|ZP_05921375.1| peptidyl-tRNA hydrolase [Enterococcus faecium TC 6]
gi|289565038|ref|ZP_06445492.1| peptidyl-tRNA hydrolase [Enterococcus faecium D344SRF]
gi|293553691|ref|ZP_06674315.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1039]
gi|293563192|ref|ZP_06677648.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1162]
gi|293570114|ref|ZP_06681194.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1071]
gi|294614901|ref|ZP_06694792.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1636]
gi|294618627|ref|ZP_06698166.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1679]
gi|294623703|ref|ZP_06702536.1| peptidyl-tRNA hydrolase [Enterococcus faecium U0317]
gi|314938216|ref|ZP_07845516.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133a04]
gi|314943111|ref|ZP_07849910.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133C]
gi|314949308|ref|ZP_07852651.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0082]
gi|314952241|ref|ZP_07855256.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133A]
gi|314992099|ref|ZP_07857549.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133B]
gi|314996282|ref|ZP_07861338.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133a01]
gi|68195824|gb|EAN10260.1| Peptidyl-tRNA hydrolase [Enterococcus faecium DO]
gi|257814081|gb|EEV42839.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,230,933]
gi|257818237|gb|EEV45565.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,502]
gi|257821879|gb|EEV49009.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,501]
gi|257828054|gb|EEV54680.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,410]
gi|260074625|gb|EEW62946.1| peptidyl-tRNA hydrolase [Enterococcus faecium C68]
gi|260079170|gb|EEW66863.1| peptidyl-tRNA hydrolase [Enterococcus faecium TC 6]
gi|289163245|gb|EFD11091.1| peptidyl-tRNA hydrolase [Enterococcus faecium D344SRF]
gi|291587486|gb|EFF19370.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1071]
gi|291592187|gb|EFF23805.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1636]
gi|291595146|gb|EFF26484.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1679]
gi|291596918|gb|EFF28136.1| peptidyl-tRNA hydrolase [Enterococcus faecium U0317]
gi|291602266|gb|EFF32494.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1039]
gi|291604842|gb|EFF34320.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1162]
gi|313589526|gb|EFR68371.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133a01]
gi|313593313|gb|EFR72158.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133B]
gi|313595636|gb|EFR74481.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133A]
gi|313598170|gb|EFR77015.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133C]
gi|313642412|gb|EFS06992.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133a04]
gi|313644314|gb|EFS08894.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0082]
Length = 186
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HNIGFM +D+I H K F AE++E +G + +L+K
Sbjct: 1 MKMIVGLGNPGTKYQYTKHNIGFMVVDKIAREHQATFKKNPFEAEVAEFFHNGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M ++ + E +VI+DDLDL G +RL+ G GHNG+KSI
Sbjct: 61 PQTFMNESGRAVGPLMTYFGI-YPEELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFS 151
N + R+++GIGRP +++HVL FS
Sbjct: 120 HLNTNVFDRIKVGIGRPEGKKTVVQHVLSPFS 151
>gi|257899965|ref|ZP_05679618.1| peptidyl-tRNA hydrolase [Enterococcus faecium Com15]
gi|257837877|gb|EEV62951.1| peptidyl-tRNA hydrolase [Enterococcus faecium Com15]
Length = 186
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HNIGFM +D+I H K F AE++E +G + +L+K
Sbjct: 1 MKMIVGLGNPGTKYQYTKHNIGFMVVDQIAREHQATFKKNPFEAEVAEFFHNGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M ++ + E +VI+DDLDL G +RL+ G GHNG+KSI
Sbjct: 61 PQTFMNESGRAVGPLMTYFGI-YPEELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFS 151
N + R+++GIGRP +++HVL FS
Sbjct: 120 HLNTNVFDRIKVGIGRPEGKKTVVQHVLSPFS 151
>gi|227552671|ref|ZP_03982720.1| aminoacyl-tRNA hydrolase [Enterococcus faecium TX1330]
gi|293378836|ref|ZP_06624991.1| aminoacyl-tRNA hydrolase [Enterococcus faecium PC4.1]
gi|227178200|gb|EEI59172.1| aminoacyl-tRNA hydrolase [Enterococcus faecium TX1330]
gi|292642377|gb|EFF60532.1| aminoacyl-tRNA hydrolase [Enterococcus faecium PC4.1]
Length = 197
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 101/164 (61%), Gaps = 6/164 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HNIGFM +D+I H K F AE++E +G + +L+K
Sbjct: 12 MKMIVGLGNPGTKYQYTKHNIGFMVVDQIAREHQAAFKKNPFEAEVAEFFHNGEKILLVK 71
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M ++ + E +VI+DDLDL G +RL+ G GHNG+KSI
Sbjct: 72 PQTFMNESGRAVGPLMTYFGI-YPEELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIIS 130
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
N + R+++GIGRP +++HVL FS + P+I+
Sbjct: 131 HLNTNVFDRIKVGIGRPEGKKTVVQHVLSPFSKENQ----PLIE 170
>gi|298490956|ref|YP_003721133.1| peptidyl-tRNA hydrolase ['Nostoc azollae' 0708]
gi|298232874|gb|ADI64010.1| peptidyl-tRNA hydrolase ['Nostoc azollae' 0708]
Length = 209
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 104/181 (57%), Gaps = 9/181 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTI-LIK 60
++ GLGNP +Y + RHNIGF ID + P A +KF + EG G I L+K
Sbjct: 15 LIVGLGNPEPKYEQTRHNIGFTAIDALSRPWQIPLAENRKFQGQFGEGTAPGGGKIGLLK 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MN SG S+ V ++YKLP E+ LVI+DD+DL G RL+ G GHNG+KS IS
Sbjct: 75 PLTYMNRSGHSVQAVRSWYKLPP-ESVLVIYDDMDLPLGKTRLRLSGSAGGHNGMKSIIS 133
Query: 120 EKCGKNYKRLRIGIGRP-----PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+N+ RL+IGIG+P D + HVLG FS+ E + +++ + + L K
Sbjct: 134 HLSSQNFPRLKIGIGKPKGAANEDNTDTVSHVLGRFSATETKLMTLVLEFVIECVELTLK 193
Query: 175 R 175
+
Sbjct: 194 Q 194
>gi|119390957|sp|Q0ARN8|PTH_MARMM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 200
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 112/185 (60%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGN +Y NRHN+GFM +D I W+K+F SE + + +L+K
Sbjct: 1 MKILAGLGNYEPKYLRNRHNVGFMALDIIAQAWNAGPWRKRFQGLASEVTIGSNKLLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTF N +G S+ FY++ E+ +V HD+LDL G R+K GGG AG+NG+KSI+
Sbjct: 61 PQTFYNNAGNSVGAAAAFYRV-KPEDIIVFHDELDLAPGKFRMKMGGGAAGNNGIKSITS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ G +++R RIGIG P D + +VL +F+ E +L+ ++D IA SL LLA + +F
Sbjct: 120 QLGPDFRRARIGIGHPGDRNRVTGYVLSDFAKAEEAWLIDLLDAIAGSLDLLAAGDYDAF 179
Query: 181 LNHIV 185
+
Sbjct: 180 QTKVT 184
>gi|114569307|ref|YP_755987.1| peptidyl-tRNA hydrolase [Maricaulis maris MCS10]
gi|114339769|gb|ABI65049.1| peptidyl-tRNA hydrolase [Maricaulis maris MCS10]
Length = 220
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 112/185 (60%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGN +Y NRHN+GFM +D I W+K+F SE + + +L+K
Sbjct: 21 MKILAGLGNYEPKYLRNRHNVGFMALDIIAQAWNAGPWRKRFQGLASEVTIGSNKLLLLK 80
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTF N +G S+ FY++ E+ +V HD+LDL G R+K GGG AG+NG+KSI+
Sbjct: 81 PQTFYNNAGNSVGAAAAFYRV-KPEDIIVFHDELDLAPGKFRMKMGGGAAGNNGIKSITS 139
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ G +++R RIGIG P D + +VL +F+ E +L+ ++D IA SL LLA + +F
Sbjct: 140 QLGPDFRRARIGIGHPGDRNRVTGYVLSDFAKAEEAWLIDLLDAIAGSLDLLAAGDYDAF 199
Query: 181 LNHIV 185
+
Sbjct: 200 QTKVT 204
>gi|329769844|ref|ZP_08261244.1| peptidyl-tRNA hydrolase [Gemella sanguinis M325]
gi|328838020|gb|EGF87642.1| peptidyl-tRNA hydrolase [Gemella sanguinis M325]
Length = 185
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 104/183 (56%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGFM +D + K KF+AE + +G + IL+K
Sbjct: 1 MKLMVGLGNPGKQYENTRHNIGFMILDELAKSWGVSFDKNKFNAEYAMTHYNGEKYILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG++L + +++++ ++E+ LVI+DDLD +LK G GHNG+KSI
Sbjct: 61 PTTYMNLSGEALRKFYDYFEI-DIEDILVIYDDLDTKTANFKLKAKGSSGGHNGIKSIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + RL+IGI RP ++ +VLG FS E + I + +K V
Sbjct: 120 HLGTEKFNRLKIGIDRPTPPMKVVDYVLGRFSKDEMVEIEKIYSKSINCIEDFSKMNFVE 179
Query: 180 FLN 182
+N
Sbjct: 180 LMN 182
>gi|293571070|ref|ZP_06682111.1| peptidyl-tRNA hydrolase [Enterococcus faecium E980]
gi|291608853|gb|EFF38134.1| peptidyl-tRNA hydrolase [Enterococcus faecium E980]
Length = 197
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 101/164 (61%), Gaps = 6/164 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HNIGFM +D+I H K F AE++E +G + +L+K
Sbjct: 12 MKMIVGLGNPGTKYQYTKHNIGFMVVDQIAREHQATFKKNPFEAEVAEFFHNGEKILLVK 71
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M ++ + E +VI+DDLDL G +RL+ G GHNG+KSI
Sbjct: 72 PQTFMNESGRAVGPLMTYFGI-YPEELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIIS 130
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
N + R+++GIGRP +++HVL FS + P+I+
Sbjct: 131 HLNTNVFDRIKVGIGRPEGKKTVVQHVLSPFSKENQ----PLIE 170
>gi|323490991|ref|ZP_08096185.1| peptidyl-tRNA hydrolase [Planococcus donghaensis MPA1U2]
gi|323395347|gb|EGA88199.1| peptidyl-tRNA hydrolase [Planococcus donghaensis MPA1U2]
Length = 187
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y + RHNIGF ID + S P + KF S + IL+K
Sbjct: 1 MKLIIGLGNPGKTYEDTRHNIGFKVIDYLASQWDAPLTQSKFKGMYSVSHRPEGKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++Y + L++ +VI+DDLDL G LRL+ G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGESVAALMDYYNI-ELKDIIVIYDDLDLPTGQLRLRQKGSAGGHNGIKSLIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + + RLRIGI RPP + +VL FS+ E
Sbjct: 120 HLGNQEFNRLRIGISRPPAGMKVPDYVLQRFSTEE 154
>gi|320450995|ref|YP_004203091.1| peptidyl-tRNA hydrolase [Thermus scotoductus SA-01]
gi|320151164|gb|ADW22542.1| peptidyl-tRNA hydrolase [Thermus scotoductus SA-01]
Length = 192
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 102/166 (61%), Gaps = 11/166 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF+V G GNPG Y RHN+GFM +DR+ F +++ A ++E ++DG + +K
Sbjct: 1 MFLVVGQGNPGERYARTRHNLGFMVLDRL-GLEF----RERGEALLAEVEVDGEKGFFLK 55
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+ NLSGQ + ++ FYK+P E LV+HD++DL G LR K GG AG+ G+ SI++
Sbjct: 56 PLTYYNLSGQVVAPLVRFYKIPP-ERLLVVHDEMDLPLGRLRFKAGGSPAGNRGVASIAQ 114
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
G + + RLR+GIG+PP +VL F PE + P+++ +
Sbjct: 115 ALGTEAFHRLRLGIGKPPSRELGAAYVLSPF-LPEEW---PVVERV 156
>gi|167644634|ref|YP_001682297.1| peptidyl-tRNA hydrolase [Caulobacter sp. K31]
gi|167347064|gb|ABZ69799.1| Aminoacyl-tRNA hydrolase [Caulobacter sp. K31]
Length = 208
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 116/189 (61%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG----LRT 56
M I+AGLGNP +Y +NRHN+GFM +D + W+ +F EGQ+ ++
Sbjct: 3 MLILAGLGNPEPKYEKNRHNVGFMAVDALARKWGVAPWRSRFQGLACEGQVSTPNGPVKL 62
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L+KP+TF N SG+++ E M F+KL + + +V HD++D+ G R+K GGG AG+NG++
Sbjct: 63 LLLKPKTFYNESGRAVGEAMKFFKL-SPADVIVFHDEIDMAPGRFRMKAGGGAAGNNGVR 121
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
SI+ + G ++R RIG+G P ++ +VLG+F E +L P++D + +LP A +
Sbjct: 122 SITSQIGDGFRRGRIGVGHPGHKDAVMHYVLGDFHKVEHQWLDPLLDAVCDALPFAAAGD 181
Query: 177 DVSFLNHIV 185
D + ++
Sbjct: 182 DERYQAEVL 190
>gi|93005014|ref|YP_579451.1| peptidyl-tRNA hydrolase [Psychrobacter cryohalolentis K5]
gi|119390985|sp|Q1QED6|PTH_PSYCK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|92392692|gb|ABE73967.1| peptidyl-tRNA hydrolase [Psychrobacter cryohalolentis K5]
Length = 193
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 99/171 (57%), Gaps = 2/171 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF + + F+ A KKFH GQ+ G L+ P
Sbjct: 5 LIVGLGNPGQEYMFTRHNAGFWFVLHLAQQFNITLAPDKKFHGVTGRGQIHGHDVRLLMP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS++ ++ FY + N E L+ HD+LD+ G+++LKT GG GHNGL+ I+
Sbjct: 65 LTFMNKSGQSVVPMVKFYGIDNDE-LLIAHDELDIPAGSIKLKTDGGHGGHNGLRDITPH 123
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G ++ RLR+GIG P + + HVL + E+ + + +LPLL
Sbjct: 124 IGNDFHRLRVGIGHPGHKSKVSGHVLSKAAPDEQIAIDSALSAAFDALPLL 174
>gi|297734182|emb|CBI15429.3| unnamed protein product [Vitis vinifera]
Length = 307
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 107/193 (55%), Gaps = 6/193 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D I F + +G + + +L KP
Sbjct: 113 WLLVGLGNPGKKYNGTRHNVGFEMVDAIAEAEGISISSVSFKSLFGKGFIGNVPVMLAKP 172
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFMN+SG+S+ ++++YK+P L+ LVI DDLDL F LRL GG GHNG++S+ +
Sbjct: 173 QTFMNVSGESVGAIVSYYKIP-LKQVLVIFDDLDLPFSKLRLLPKGGHGGHNGMRSVIDH 231
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN---IARSLPLLAKRE 176
K +++ RLRIGIGRPP VL FS ER L N R L L +
Sbjct: 232 FKGSRDFPRLRIGIGRPPGKMDTANFVLSPFSKREREELDFTFQNGVEAVRILLLEGFNK 291
Query: 177 DVSFLNHIVSVRK 189
SF+N S+ +
Sbjct: 292 SASFVNTAKSLEQ 304
>gi|118587140|ref|ZP_01544569.1| peptidyl-tRNA hydrolase [Oenococcus oeni ATCC BAA-1163]
gi|118432419|gb|EAV39156.1| peptidyl-tRNA hydrolase [Oenococcus oeni ATCC BAA-1163]
Length = 190
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 102/165 (61%), Gaps = 4/165 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
IV GLGN G +Y NRHN+GFM +D + + + K+ HA ++ ++ + L+KP
Sbjct: 4 IVVGLGNIGAKYAHNRHNVGFMAVDELAARLQANFSLKQNLHAFVASTHVEEEKVYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-SE 120
T MN SG ++ V+N++ + ++ + +V DD+D D+G LR+K G GHNGLKSI S+
Sbjct: 64 TTMMNDSGIAVKAVLNYF-VGDVNDLIVFVDDIDRDYGQLRIKKSGASGGHNGLKSIVSQ 122
Query: 121 KCGKNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDN 164
+ + R+RIG GRP + +I+HVLG+FS + + P IDN
Sbjct: 123 IASQEFLRIRIGAGRPAHNPQAVIKHVLGDFSPLQLELVQPEIDN 167
>gi|76787164|ref|YP_328734.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae A909]
gi|77405628|ref|ZP_00782717.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae H36B]
gi|119391017|sp|Q3K419|PTH_STRA1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|76562221|gb|ABA44805.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae A909]
gi|77175772|gb|EAO78552.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae H36B]
Length = 191
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 102/177 (57%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HNIGFM IDRI + K F AEI ++G + IKP
Sbjct: 4 MIVGLGNPGSKYNDTKHNIGFMAIDRIVKNLDVNFTEDKNFKAEIGSDFINGEKIYFIKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + +++ ++I+DDLD++ G +R + G GHNG+KSI
Sbjct: 64 TTFMNNSGIAVKALLTYYNIS-IKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R+++GIGRP +I HVLG F + + +D + ++ + D
Sbjct: 123 LGTQEFDRIKVGIGRPNGRMTVINHVLGKFDKNDEIMISNTLDKVDNAVKYYLQTND 179
>gi|269217261|ref|ZP_06161115.1| aminoacyl-tRNA hydrolase [Slackia exigua ATCC 700122]
gi|269129398|gb|EEZ60483.1| aminoacyl-tRNA hydrolase [Slackia exigua ATCC 700122]
Length = 185
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 91/150 (60%), Gaps = 2/150 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF ID + WK + A + G +L K
Sbjct: 1 MHLIVGLGNPGEEYAHTRHNAGFEVIDLLAGELRVSYWKSECGALTGKTAYRGEDIVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ++MN SG + ++ Y ++ +VIHD+LD+D GT+R+K GGG AGHNGLKSI+E
Sbjct: 61 PQSYMNASGGPVKQLAAAYGA-TPDDIVVIHDELDIDPGTIRVKFGGGLAGHNGLKSIAE 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGN 149
K K++ R+RIGIGRPP ++ VLG
Sbjct: 120 KLQTKDWARVRIGIGRPPGRMPVVDWVLGT 149
>gi|226365172|ref|YP_002782955.1| peptidyl-tRNA hydrolase [Rhodococcus opacus B4]
gi|254783884|sp|C1AY15|PTH_RHOOB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226243662|dbj|BAH54010.1| peptidyl-tRNA hydrolase [Rhodococcus opacus B4]
Length = 190
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 115/175 (65%), Gaps = 5/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF--FPAWKKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y + RHN+GFM + + F A KK AEI +G+L+G TIL K
Sbjct: 7 LVVGLGNPGPQYEKTRHNVGFMVAGVLSARMGGKFSAHKKS-GAEIVQGRLEGRPTILAK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG ++ + F+ + + N +VIHD+LDLDFGT+RLK GGG+ GHNGL+SIS+
Sbjct: 66 PRSFMNLSGSAVAGLARFFSV-DPGNIVVIHDELDLDFGTIRLKQGGGEGGHNGLRSISQ 124
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K+Y R R+GIGRPP +VL FSS ER L + + A ++ L+ +
Sbjct: 125 SLGTKDYLRTRVGIGRPPGRMDPASYVLKPFSSVERKELDLVCEESADAVELVLR 179
>gi|212637895|ref|YP_002314415.1| peptidyl-tRNA hydrolase SpoVC [Anoxybacillus flavithermus WK1]
gi|212559375|gb|ACJ32430.1| Peptidyl-tRNA hydrolase SpoVC [Anoxybacillus flavithermus WK1]
Length = 207
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 104/174 (59%), Gaps = 6/174 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+ GLGNPG EY + RHN+GFM ID + + KF + G + G + IL KP
Sbjct: 24 LFVGLGNPGKEYEQTRHNVGFMVIDELAHRWGLSLNQTKFQGIFTSGMISGEKVILCKPL 83
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-ISEK 121
T+MNLSG+ + +M++Y + ++++ +VI+DDLDL GT+RL+ G GHNG+KS I
Sbjct: 84 TYMNLSGECVRPLMDYYNI-DVDDLIVIYDDLDLSTGTVRLRPKGSAGGHNGMKSLIHHL 142
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII----DNIARSLPL 171
+ +KR+RIGI RP + + +VLG +++ E+ + I D RSL +
Sbjct: 143 KTEQFKRIRIGIDRPKNGMRVSDYVLGRWTAEEKIQIEQAIQKAADACERSLKI 196
>gi|148988909|ref|ZP_01820324.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP6-BS73]
gi|168493995|ref|ZP_02718138.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CDC3059-06]
gi|147925720|gb|EDK76796.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP6-BS73]
gi|183575957|gb|EDT96485.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CDC3059-06]
gi|301793330|emb|CBW35689.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae INV104]
Length = 189
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 105/170 (61%), Gaps = 3/170 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++++ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G + R++IGIGRP + ++ HVL F + +L +D + S+
Sbjct: 123 IGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDRDDYIGILQSVDKVDDSVK 172
>gi|15899954|ref|NP_344558.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae TIGR4]
gi|111658625|ref|ZP_01409275.1| hypothetical protein SpneT_02000215 [Streptococcus pneumoniae
TIGR4]
gi|148984549|ref|ZP_01817837.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP3-BS71]
gi|148993580|ref|ZP_01823051.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP9-BS68]
gi|148997953|ref|ZP_01825466.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP11-BS70]
gi|168487225|ref|ZP_02711733.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CDC1087-00]
gi|168489340|ref|ZP_02713539.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP195]
gi|168576115|ref|ZP_02722020.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae MLV-016]
gi|169833645|ref|YP_001693439.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae Hungary19A-6]
gi|194397946|ref|YP_002036726.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae G54]
gi|225855740|ref|YP_002737251.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae P1031]
gi|225857814|ref|YP_002739324.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae 70585]
gi|307066641|ref|YP_003875607.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae AP200]
gi|21263855|sp|Q97TD1|PTH_STRPN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226709068|sp|B5E572|PTH_STRP4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238688350|sp|B1I6X7|PTH_STRPI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783889|sp|C1C986|PTH_STRP7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783893|sp|C1CN70|PTH_STRZP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|14971469|gb|AAK74198.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae TIGR4]
gi|147755963|gb|EDK63006.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP11-BS70]
gi|147923326|gb|EDK74440.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP3-BS71]
gi|147927801|gb|EDK78823.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP9-BS68]
gi|168996147|gb|ACA36759.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae Hungary19A-6]
gi|183569906|gb|EDT90434.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CDC1087-00]
gi|183572322|gb|EDT92850.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP195]
gi|183578086|gb|EDT98614.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae MLV-016]
gi|194357613|gb|ACF56061.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae G54]
gi|225721323|gb|ACO17177.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae 70585]
gi|225725567|gb|ACO21419.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae P1031]
gi|301799154|emb|CBW31666.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae OXC141]
gi|306408178|gb|ADM83605.1| Peptidyl-tRNA hydrolase [Streptococcus pneumoniae AP200]
gi|332071708|gb|EGI82201.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae GA17570]
Length = 189
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 105/169 (62%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++++ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + R++IGIGRP + ++ HVL F + +L +D + S+
Sbjct: 123 IGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDRDDYIGILQSVDKVDDSV 171
>gi|290967809|ref|ZP_06559362.1| aminoacyl-tRNA hydrolase [Megasphaera genomosp. type_1 str. 28L]
gi|290782168|gb|EFD94743.1| aminoacyl-tRNA hydrolase [Megasphaera genomosp. type_1 str. 28L]
Length = 188
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 90/149 (60%), Gaps = 1/149 (0%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG EY +HN GFM +D + + W++K A ++ G +L+KPQ
Sbjct: 1 MIVGLGNPGREYENTKHNTGFMTVDALAADMGADRWQQKMAALVASVSFRGETILLVKPQ 60
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG+++ +M +YKL + Y+V +DD+DL G LR++ G D GHNG+KSI
Sbjct: 61 TYMNDSGRAVGPLMRWYKLAEPQVYIV-YDDMDLPVGRLRIRKSGSDGGHNGIKSIFANG 119
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFS 151
+ R RIGIGRP ++ HVL F+
Sbjct: 120 CTEFIRFRIGIGRPLPQWSVVDHVLAPFT 148
>gi|282882227|ref|ZP_06290866.1| aminoacyl-tRNA hydrolase [Peptoniphilus lacrimalis 315-B]
gi|281297992|gb|EFA90449.1| aminoacyl-tRNA hydrolase [Peptoniphilus lacrimalis 315-B]
Length = 192
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 101/155 (65%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+F++AGLGNPG +Y + +HNIGF +D+I K KF + E ++ R IL+K
Sbjct: 4 LFVIAGLGNPGKDYEKTKHNIGFSTVDKIAEKLSVNMNKIKFKGLLGETRIGQNRLILLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-S 119
PQTFMN SG+S+ ++FYK+ +++N +VI DD+D++FG L++K G HNGLKSI +
Sbjct: 64 PQTFMNNSGESIRMCLDFYKV-DVKNLIVIVDDIDINFGQLKIKKEGSAGTHNGLKSIVN 122
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
K++ R+++GIG+ + + VL NFSS +
Sbjct: 123 HLSSKSFPRIKVGIGQKKEGEDLANFVLSNFSSND 157
>gi|297582392|ref|YP_003698172.1| peptidyl-tRNA hydrolase [Bacillus selenitireducens MLS10]
gi|297140849|gb|ADH97606.1| peptidyl-tRNA hydrolase [Bacillus selenitireducens MLS10]
Length = 191
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 99/170 (58%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y RHN+GF ID + P + KF + L+K
Sbjct: 1 MKLAVGLGNPGKAYERTRHNVGFDVIDHVSDQLGIPLDQNKFKGVFGTHRTPKGPFTLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P TFMNLSG+S+ ++ ++Y +P E+ LVI+DDLDL G +RL+T GG GHNG++S +S
Sbjct: 61 PMTFMNLSGESIRQIADYYDIPP-EDILVIYDDLDLPPGKIRLRTKGGHGGHNGIRSTLS 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+++ R+RIGIGRP + HVLG FS +R + + A+++
Sbjct: 120 HLNTESFNRIRIGIGRPEPGTKVTDHVLGRFSPDDRELVDEAVRQAAKAV 169
>gi|218441393|ref|YP_002379722.1| aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7424]
gi|218174121|gb|ACK72854.1| Aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7424]
Length = 210
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 103/165 (62%), Gaps = 6/165 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTI-LI 59
++ GLGNP +Y + RHNIGF +D + + +W+ K+F +EG + I L+
Sbjct: 14 LIIGLGNPEEKYEKTRHNIGFEAVDLLAKM-WQLSWQQNKRFQGFFTEGTGPNHQKIRLL 72
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-I 118
KP T+MN SG+S+ V+++YKLP +E+ LVI+DD+DL G +RL+ G GHNG+KS I
Sbjct: 73 KPLTYMNRSGESVRAVIDWYKLP-VESILVIYDDMDLPLGRIRLRLSGSAGGHNGIKSII 131
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
S G+N+ RLRIGIG+ I HVLG FS+ E + ++
Sbjct: 132 SHVGGQNFPRLRIGIGKSNQKKETISHVLGRFSADENQIMSEVLQ 176
>gi|293364520|ref|ZP_06611245.1| aminoacyl-tRNA hydrolase [Streptococcus oralis ATCC 35037]
gi|307702810|ref|ZP_07639760.1| peptidyl-tRNA hydrolase [Streptococcus oralis ATCC 35037]
gi|291317028|gb|EFE57456.1| aminoacyl-tRNA hydrolase [Streptococcus oralis ATCC 35037]
gi|307623666|gb|EFO02653.1| peptidyl-tRNA hydrolase [Streptococcus oralis ATCC 35037]
Length = 189
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ +G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFFNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + R++IGIGRP ++ HVL F + +L ID + ++
Sbjct: 123 IGTQIFNRVKIGIGRPKKGMSVVHHVLSKFDQDDYVGILQSIDKVDDAV 171
>gi|224543055|ref|ZP_03683594.1| hypothetical protein CATMIT_02255 [Catenibacterium mitsuokai DSM
15897]
gi|224523995|gb|EEF93100.1| hypothetical protein CATMIT_02255 [Catenibacterium mitsuokai DSM
15897]
Length = 184
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 98/159 (61%), Gaps = 3/159 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF C+D + K+KF ++ + G IL+K
Sbjct: 1 MKLIVGLGNPGKEYDMTRHNTGFYCLDVLSDEMNQSIDKEKFKGLYTKFKYKGEDVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ VM F+K+P +E+ LVI+DD+D+ G LRL+ G GHNG+KSI
Sbjct: 61 PQTYMNNSGESVAAVMQFFKIP-VEDLLVIYDDMDMPTGKLRLREKGSAGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G +N+KR+R+GI + ++ VLG+FS E +
Sbjct: 120 HVGTQNFKRIRVGISKNK-LYSVVDWVLGHFSKEEEKLI 157
>gi|94265982|ref|ZP_01289705.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
gi|93453448|gb|EAT03864.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
Length = 196
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 112/191 (58%), Gaps = 3/191 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M +VAGLGNPG +Y + RHNIGF+ ID + H + K+ A G L G +L+
Sbjct: 1 MRLVAGLGNPGAKYEDTRHNIGFLFIDHLALRHGISLKEESKWEAASGRGTLWGQPVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+++ + FY++ E V HD+LDL FG+ R+ G G GHNG++S+
Sbjct: 61 KPLTYMNLSGRAVGRLARFYRI-EAEAVAVFHDELDLPFGSARVAKGRGAGGHNGVRSLI 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G +++ R R+G+GRPP+ +VL +FS ER L + + L LL R++
Sbjct: 120 DHLGSRDFVRFRLGVGRPPEQHPTAGYVLSSFSPEERQALPDLFALLEEGLQLLLTRDEK 179
Query: 179 SFLNHIVSVRK 189
+ +N I + K
Sbjct: 180 AAMNLINATTK 190
>gi|313902508|ref|ZP_07835909.1| peptidyl-tRNA hydrolase [Thermaerobacter subterraneus DSM 13965]
gi|313467194|gb|EFR62707.1| peptidyl-tRNA hydrolase [Thermaerobacter subterraneus DSM 13965]
Length = 208
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 92/157 (58%), Gaps = 2/157 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
I+ GLGNPG EY RHN+GF +D + W++ F + +EG G +L+KPQ
Sbjct: 4 IIVGLGNPGPEYEGTRHNVGFAVVDALARRLRTAGWRRGFRSLWAEGTWRGQPVVLLKPQ 63
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG+++ + ++P E LVI+DDLDL G LRL+ G GH G+ SI
Sbjct: 64 TYMNLSGEAVAQACRNLRVPPGE-VLVIYDDLDLPPGHLRLRPRGSAGGHRGVASIIASL 122
Query: 123 GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G+ ++ RLR+GIGRPP +VL F+ E+ +
Sbjct: 123 GRDDFPRLRVGIGRPPAGVDAADYVLAPFAPAEQPLM 159
>gi|149013379|ref|ZP_01834088.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP19-BS75]
gi|182682975|ref|YP_001834722.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CGSP14]
gi|303254906|ref|ZP_07340991.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae BS455]
gi|303259731|ref|ZP_07345707.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP-BS293]
gi|303262198|ref|ZP_07348143.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP14-BS292]
gi|303265394|ref|ZP_07351301.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae BS397]
gi|303266058|ref|ZP_07351952.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae BS457]
gi|303268466|ref|ZP_07354260.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae BS458]
gi|238691173|sp|B2IQZ3|PTH_STRPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|147762902|gb|EDK69850.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP19-BS75]
gi|182628309|gb|ACB89257.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CGSP14]
gi|301800978|emb|CBW33639.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae INV200]
gi|302598177|gb|EFL65238.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae BS455]
gi|302636838|gb|EFL67328.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP14-BS292]
gi|302639283|gb|EFL69742.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP-BS293]
gi|302641967|gb|EFL72320.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae BS458]
gi|302644362|gb|EFL74615.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae BS457]
gi|302645071|gb|EFL75311.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae BS397]
gi|332077812|gb|EGI88271.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae GA41301]
Length = 189
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 106/169 (62%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+KP
Sbjct: 4 LLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y L ++++ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALLTYYGL-DIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQH 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R++IGIGRP + ++ HVL F + +L +D + S+
Sbjct: 123 IGTHVFNRVKIGIGRPKNGMSVVHHVLSKFDRDDYIGILQSVDKVDDSV 171
>gi|322412920|gb|EFY03827.1| peptidyl-tRNA hydrolase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 189
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HNIGFM ID+ ++ K F A+I ++ + +KP
Sbjct: 4 MIVGLGNPGSKYEKTKHNIGFMAIDKLVNKIDITFTEDKNFKAQIGSAFINHEKIYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + +E+ +VI+DDLD++ G LRL+ G GHNG+KSI
Sbjct: 64 TTFMNNSGFAVKALLTYYNIA-IEDLIVIYDDLDMEVGKLRLRAKGSAGGHNGIKSIIAH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R+++GIGRP +I HV+G+FS+ + + +D + ++
Sbjct: 123 LGTQEFDRIKVGIGRPLKDMTVINHVMGHFSTEDNIAIALTLDKVVNAV 171
>gi|56961863|ref|YP_173585.1| peptidyl-tRNA hydrolase [Bacillus clausii KSM-K16]
gi|68052898|sp|Q5WAD6|PTH_BACSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56908097|dbj|BAD62624.1| peptidyl-tRNA hydrolase stage V sporulation protein C [Bacillus
clausii KSM-K16]
Length = 185
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 107/183 (58%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHNIGF IDR P K+KF A E ++ + +L+K
Sbjct: 1 MKLVVGLGNPGKKYEHTRHNIGFDIIDRCAQKLDLPLDKQKFKAIYGEKRIGSEKVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ M+++ + N E +VI+DDLDL G +RL+ G GHNG+KS+
Sbjct: 61 PLTYMNLSGEAVRPFMDYFNISNDE-LVVIYDDLDLPVGKIRLRKKGSAGGHNGIKSLIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ R+R+GIGRP ++ +VL + E F+ + A+++ ++ +
Sbjct: 120 HLGTEDFNRIRVGIGRPAHGEPVVHYVLDTYRKEELAFMNEAAEKSAKAIEAWLEKPFLE 179
Query: 180 FLN 182
+N
Sbjct: 180 VMN 182
>gi|15923492|ref|NP_371026.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus Mu50]
gi|15926179|ref|NP_373712.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus N315]
gi|21282186|ref|NP_645274.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus MW2]
gi|49482729|ref|YP_039953.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49485366|ref|YP_042587.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650043|ref|YP_185434.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus COL]
gi|87160087|ref|YP_493189.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194262|ref|YP_499054.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|148266961|ref|YP_001245904.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus JH9]
gi|150393007|ref|YP_001315682.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus JH1]
gi|151220677|ref|YP_001331499.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156978830|ref|YP_001441089.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus Mu3]
gi|161508742|ref|YP_001574401.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142306|ref|ZP_03566799.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253315229|ref|ZP_04838442.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253730970|ref|ZP_04865135.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253735237|ref|ZP_04869402.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
TCH130]
gi|255005295|ref|ZP_05143896.2| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257424614|ref|ZP_05601042.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427280|ref|ZP_05603681.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429917|ref|ZP_05606303.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
68-397]
gi|257432619|ref|ZP_05608981.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus E1410]
gi|257435523|ref|ZP_05611573.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus M876]
gi|257794257|ref|ZP_05643236.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9781]
gi|258407226|ref|ZP_05680371.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9763]
gi|258420807|ref|ZP_05683743.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9719]
gi|258424462|ref|ZP_05687341.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9635]
gi|258429619|ref|ZP_05688293.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9299]
gi|258446111|ref|ZP_05694272.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A6300]
gi|258448019|ref|ZP_05696149.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A6224]
gi|258452817|ref|ZP_05700812.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A5948]
gi|258453835|ref|ZP_05701808.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A5937]
gi|262049987|ref|ZP_06022846.1| peptidyl-tRNA hydrolase [Staphylococcus aureus D30]
gi|262052531|ref|ZP_06024728.1| peptidyl-tRNA hydrolase [Staphylococcus aureus 930918-3]
gi|269202122|ref|YP_003281391.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ED98]
gi|282895110|ref|ZP_06303330.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A8117]
gi|282903088|ref|ZP_06310980.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus C160]
gi|282904877|ref|ZP_06312737.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282907824|ref|ZP_06315662.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910140|ref|ZP_06317946.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913330|ref|ZP_06321121.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus M899]
gi|282915820|ref|ZP_06323588.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus D139]
gi|282918283|ref|ZP_06326023.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus C427]
gi|282923034|ref|ZP_06330720.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus C101]
gi|282925577|ref|ZP_06333230.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9765]
gi|283768937|ref|ZP_06341846.1| peptidyl-tRNA hydrolase PTH1 family protein [Staphylococcus aureus
subsp. aureus H19]
gi|283957292|ref|ZP_06374750.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284023511|ref|ZP_06377909.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus 132]
gi|293500379|ref|ZP_06666231.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
58-424]
gi|293509317|ref|ZP_06668033.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus M809]
gi|293515906|ref|ZP_06670596.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
M1015]
gi|294850362|ref|ZP_06791095.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9754]
gi|295407392|ref|ZP_06817189.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A8819]
gi|295427036|ref|ZP_06819673.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296276155|ref|ZP_06858662.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus MR1]
gi|297207395|ref|ZP_06923834.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297246472|ref|ZP_06930312.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A8796]
gi|297591587|ref|ZP_06950224.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus MN8]
gi|300910354|ref|ZP_07127807.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
TCH70]
gi|304380520|ref|ZP_07363196.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|54038906|sp|P65868|PTH_STAAN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54038907|sp|P65869|PTH_STAAW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54041592|sp|P65867|PTH_STAAM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56749398|sp|Q6GBY6|PTH_STAAS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56749427|sp|Q6GJG9|PTH_STAAR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56749435|sp|Q6YP15|PTH_STAAU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052875|sp|Q5HIH3|PTH_STAAC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391012|sp|Q2FJD9|PTH_STAA3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391013|sp|Q2G0R9|PTH_STAA8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229456|sp|A7WYQ5|PTH_STAA1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|172048769|sp|A6QEF5|PTH_STAAE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038168|sp|A6TYX7|PTH_STAA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038169|sp|A5IQ55|PTH_STAA9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038170|sp|A8Z0Z1|PTH_STAAT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|13700392|dbj|BAB41690.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus N315]
gi|14246270|dbj|BAB56664.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus Mu50]
gi|21203622|dbj|BAB94322.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus MW2]
gi|21307671|gb|AAK61416.1| peptidyl-tRNA hydrolase [Staphylococcus aureus]
gi|49240858|emb|CAG39525.1| putative peptidyl-tRNA hydrolase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49243809|emb|CAG42234.1| putative peptidyl-tRNA hydrolase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57284229|gb|AAW36323.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus COL]
gi|87126061|gb|ABD20575.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201820|gb|ABD29630.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|147740030|gb|ABQ48328.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus JH9]
gi|149945459|gb|ABR51395.1| Aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus JH1]
gi|150373477|dbj|BAF66737.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156720965|dbj|BAF77382.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus Mu3]
gi|160367551|gb|ABX28522.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253725282|gb|EES94011.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726797|gb|EES95526.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
TCH130]
gi|257272641|gb|EEV04761.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275931|gb|EEV07399.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279433|gb|EEV10028.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
68-397]
gi|257282484|gb|EEV12617.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus E1410]
gi|257285160|gb|EEV15277.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus M876]
gi|257788229|gb|EEV26569.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9781]
gi|257841184|gb|EEV65633.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9763]
gi|257843199|gb|EEV67612.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9719]
gi|257845331|gb|EEV69366.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9635]
gi|257849678|gb|EEV73645.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9299]
gi|257855088|gb|EEV78030.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A6300]
gi|257858709|gb|EEV81582.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A6224]
gi|257859503|gb|EEV82356.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A5948]
gi|257864006|gb|EEV86761.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A5937]
gi|259159578|gb|EEW44625.1| peptidyl-tRNA hydrolase [Staphylococcus aureus 930918-3]
gi|259161922|gb|EEW46505.1| peptidyl-tRNA hydrolase [Staphylococcus aureus D30]
gi|262074412|gb|ACY10385.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ED98]
gi|269940073|emb|CBI48449.1| putative peptidyl-tRNA hydrolase [Staphylococcus aureus subsp.
aureus TW20]
gi|282314553|gb|EFB44940.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus C101]
gi|282317849|gb|EFB48218.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus C427]
gi|282320311|gb|EFB50653.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus D139]
gi|282322801|gb|EFB53121.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus M899]
gi|282325988|gb|EFB56294.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328300|gb|EFB58575.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331994|gb|EFB61503.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282592481|gb|EFB97493.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9765]
gi|282596514|gb|EFC01474.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus C160]
gi|282762528|gb|EFC02668.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A8117]
gi|283461118|gb|EFC08204.1| peptidyl-tRNA hydrolase PTH1 family protein [Staphylococcus aureus
subsp. aureus H19]
gi|283469794|emb|CAQ49005.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ST398]
gi|283791216|gb|EFC30026.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285816201|gb|ADC36688.1| Peptidyl-tRNA hydrolase [Staphylococcus aureus 04-02981]
gi|290921314|gb|EFD98372.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
M1015]
gi|291096339|gb|EFE26599.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
58-424]
gi|291467862|gb|EFF10372.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus M809]
gi|294822786|gb|EFG39222.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9754]
gi|294967749|gb|EFG43781.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A8819]
gi|295129039|gb|EFG58668.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296887958|gb|EFH26852.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297176659|gb|EFH35921.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A8796]
gi|297575456|gb|EFH94173.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus MN8]
gi|298693832|gb|ADI97054.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ED133]
gi|300888343|gb|EFK83530.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
TCH70]
gi|302332215|gb|ADL22408.1| putative peptidyl-tRNA hydrolase [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302750393|gb|ADL64570.1| putative peptidyl-tRNA hydrolase [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340924|gb|EFM06848.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312436408|gb|ADQ75479.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
TCH60]
gi|312828997|emb|CBX33839.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315128630|gb|EFT84633.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus CGS03]
gi|315193865|gb|EFU24259.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus CGS00]
gi|315196185|gb|EFU26541.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus CGS01]
gi|320139411|gb|EFW31289.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320144188|gb|EFW35956.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323438734|gb|EGA96474.1| peptidyl-tRNA hydrolase [Staphylococcus aureus O11]
gi|323442054|gb|EGA99689.1| peptidyl-tRNA hydrolase [Staphylococcus aureus O46]
gi|329313221|gb|AEB87634.1| Peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus T0131]
gi|329725048|gb|EGG61543.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
21172]
gi|329729793|gb|EGG66190.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
21189]
gi|329731061|gb|EGG67433.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
21193]
Length = 190
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 115/187 (61%), Gaps = 5/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF +D I + F K+KF + +++G + + I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVVDYILEKNNFSLDKQKFKGAYTIERMNGDKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + N E+ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVAPIMDYYNV-NPEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + +KR+RIG+GRP + + +VL FS+ E + +I++ AR++ K + S
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMTVPDYVLQRFSNDEMVTMEKVIEHAARAIE---KFVETS 176
Query: 180 FLNHIVS 186
+H+++
Sbjct: 177 RFDHVMN 183
>gi|78357171|ref|YP_388620.1| peptidyl-tRNA hydrolase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|119390935|sp|Q30ZH1|PTH_DESDG RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78219576|gb|ABB38925.1| peptidyl-tRNA hydrolase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 201
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 105/192 (54%), Gaps = 12/192 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---------HSFHFFPAWKKKFHAEISEGQLDG 53
++ GLGNPG EY RHN+GFM D + H+ KKK+ G
Sbjct: 6 LIVGLGNPGKEYENTRHNLGFMLADALLDEVRRTAPHAVTSLGTGKKKYDLWKCAPLTGG 65
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
++ KP TFMN SG ++ + FY++P E LV+HD+LDL G ++ KT GG AGHN
Sbjct: 66 SSWLVAKPLTFMNRSGDAVAHICGFYRIPP-EKILVLHDELDLPLGRMKFKTAGGLAGHN 124
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GLKSI+E+ G K++ RLR+GIG+ P + +VLG F E+ + ++ + +
Sbjct: 125 GLKSIAERTGSKDFHRLRLGIGK-PQSGQTTGYVLGRFGKDEQALVEKVLQAGVEGIRIF 183
Query: 173 AKREDVSFLNHI 184
A++ V+ I
Sbjct: 184 AQQGAVAATQFI 195
>gi|251781474|ref|YP_002995775.1| peptidyl-tRNA hydrolase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390102|dbj|BAH80561.1| peptidyl-tRNA hydrolase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 189
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HNIGFM +D+ ++ K F A+I ++ + +KP
Sbjct: 4 MIVGLGNPGSKYEKTKHNIGFMAVDKLVNKLDVTFTEDKNFKAQIGSAFINHEKIYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + +E+ +VI+DDLD++ G LRL+ G GHNG+KSI
Sbjct: 64 TTFMNNSGVAVKALLTYYNIA-IEDLIVIYDDLDMEVGKLRLRAKGSAGGHNGIKSIIAH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R+++GIGRP +I HV+G+FS+ + + +D + ++
Sbjct: 123 LGTQEFDRIKVGIGRPLKGMTVINHVMGHFSTEDNIAIALTLDKVVNAV 171
>gi|225575739|ref|ZP_03784349.1| hypothetical protein RUMHYD_03832 [Blautia hydrogenotrophica DSM
10507]
gi|225037036|gb|EEG47282.1| hypothetical protein RUMHYD_03832 [Blautia hydrogenotrophica DSM
10507]
Length = 194
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 100/170 (58%), Gaps = 1/170 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y RHNIGF +D + + P + +G + G + IL+K
Sbjct: 1 MYLIAGLGNPGRQYEHTRHNIGFDTVDVLVEEYQVPQSGVRCKGMYGKGMIAGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ + +++K+ +VI+DD+DL+ G +R++ G GHNG+K I
Sbjct: 61 PLTYMNLSGESVRGIADYFKIDPESQLIVIYDDIDLEPGQIRIRKKGSAGGHNGIKDIIA 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
K G +N+ R++IG+G P + HVL FS ER + + A ++
Sbjct: 121 KLGTQNFIRIKIGVGAKPRGWDLADHVLSRFSKEERELIDMAVSRAAAAV 170
>gi|159487239|ref|XP_001701641.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280860|gb|EDP06616.1| predicted protein [Chlamydomonas reinhardtii]
Length = 172
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 96/157 (61%), Gaps = 3/157 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG Y + RHNIGF ID + + K + A + +G+L G + +L+K
Sbjct: 1 MWMIVGLGNPGSNYDDTRHNIGFKVIDELAAAAGIDCRKLEKSAAVGKGELQGKQVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ + FY++P LV+ DDLD +RL+ GG GHNGL+SI +
Sbjct: 61 PVTFMNNSGESVAALAKFYRVPP-GRVLVVADDLDQPTAQVRLRQRGGHGGHNGLRSIID 119
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ G +++ R++IGIGRP I +VL F+ ER
Sbjct: 120 RMGGTQDFPRIKIGIGRPSGPIPIASYVLQPFNKAER 156
>gi|256374802|ref|YP_003098462.1| peptidyl-tRNA hydrolase [Actinosynnema mirum DSM 43827]
gi|255919105|gb|ACU34616.1| peptidyl-tRNA hydrolase [Actinosynnema mirum DSM 43827]
Length = 189
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 99/173 (57%), Gaps = 2/173 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ +V GLGN G +Y RHN GF+ +D + K AE+ EG+L G R +L K
Sbjct: 5 LTLVVGLGNSGPKYEGTRHNAGFLVLDELADRVGGRFKAHKGGAEVVEGRLAGQRVVLAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ +MN SG + FYK + +V+HD+LDL FG +RLK GGGD GHNGL+SI+
Sbjct: 65 PRGYMNNSGGPVSGTAKFYK-AQPASVIVVHDELDLPFGAVRLKLGGGDNGHNGLRSITR 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K+Y R+R G+ RPP +VL +FS ER L +D A ++ L
Sbjct: 124 SLGTKDYLRVRFGVDRPPGRMDPADYVLKDFSVVERKQLALELDRAADAVEAL 176
>gi|172040258|ref|YP_001799972.1| hypothetical protein cur_0578 [Corynebacterium urealyticum DSM
7109]
gi|171851562|emb|CAQ04538.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 215
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 111/188 (59%), Gaps = 6/188 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFP---AWKKKFHAEISEGQLDGLRTI 57
++V GLGNPG +Y RHNIG++ +D + P + K+ ++ I + ++DG I
Sbjct: 24 WLVVGLGNPGAQYETTRHNIGYLAVDELLDDLTPMPGTLSAHKRTNSLICQTKIDGRSVI 83
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
+ + +++MNLSG ++ + F+K+P E+ +VIHD+LDLD +R+K GGG+ GHNGLKS
Sbjct: 84 IARARSYMNLSGGAIGALAKFFKIP-AEHVIVIHDELDLDPAAVRIKVGGGENGHNGLKS 142
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
++ G ++Y R+R+GIGRPP VL FS E +L + + A ++ L R
Sbjct: 143 TTQALGTRDYVRIRMGIGRPPGRMDPASFVLKPFSKQELEWLPLSLGDAADAVRLTVSRG 202
Query: 177 DVSFLNHI 184
N I
Sbjct: 203 VAIAQNEI 210
>gi|291561351|emb|CBL40150.1| peptidyl-tRNA hydrolase [butyrate-producing bacterium SS3/4]
Length = 191
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 101/170 (59%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG EY RHN GFM +D + +KK A +G + G + IL+K
Sbjct: 1 MLIIAGLGNPGKEYENTRHNAGFMVMDALAEKIGADISEKKHKALCGKGVIGGEKVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++YK+ + E+ L+++DD+ L G LR++ G GHNG+KSI
Sbjct: 61 PQTYMNSSGESIRAAADYYKV-DPEDILIVYDDISLAPGQLRIRAKGSAGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R+++G+G P + +VLG+FS E+ + + A ++
Sbjct: 120 HLGTQEFPRVKVGVGEKPSRMDLADYVLGHFSKEEQATMDEAVKEAADAV 169
>gi|262039489|ref|ZP_06012791.1| aminoacyl-tRNA hydrolase [Leptotrichia goodfellowii F0264]
gi|261746470|gb|EEY34007.1| aminoacyl-tRNA hydrolase [Leptotrichia goodfellowii F0264]
Length = 188
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 100/178 (56%), Gaps = 7/178 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF+ ID + ++K+ +E + G + K
Sbjct: 1 MKLIVGLGNPGEQYKLTRHNIGFIFIDEYLKENNINDMREKYKSEFIQTAYKGDKVFYQK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E + F+K+ VI+DD+D++FG +++K G AGHNG+KSI +
Sbjct: 61 PLTFMNSSGEAVGEAVRFFKIDPETELFVIYDDMDMEFGKVKVKKDGRSAGHNGIKSIIQ 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL-------LPIIDNIARSLPL 171
G+ + R++ GIG+P I VLG FS E+ L +ID+I + L
Sbjct: 121 HVGEKFVRIKYGIGKPKSKDETIGFVLGKFSPEEKETLKESREKIFSLIDDIKNDMTL 178
>gi|317120948|ref|YP_004100951.1| peptidyl-tRNA hydrolase [Thermaerobacter marianensis DSM 12885]
gi|315590928|gb|ADU50224.1| peptidyl-tRNA hydrolase [Thermaerobacter marianensis DSM 12885]
Length = 220
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
I+ GLGNPG EY RHN+GF +D + W++ F + +EG G L+KPQ
Sbjct: 4 IIVGLGNPGPEYEGTRHNVGFAVVDALARRLRTAGWRRGFASLWAEGSWRGQPVALLKPQ 63
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-ISEK 121
T+MN SG+++ + +++P E LV++DDLDL G LRL+ G GH G+ S I+
Sbjct: 64 TYMNASGEAVQQACRAWRVPPAE-VLVVYDDLDLPPGHLRLRPRGSAGGHRGVASIIAAL 122
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G+++ RLRIGIGRPP +VL F E+ +
Sbjct: 123 GGEDFPRLRIGIGRPPAGVDAAEYVLAPFDPAEQPLM 159
>gi|296118205|ref|ZP_06836786.1| aminoacyl-tRNA hydrolase [Corynebacterium ammoniagenes DSM 20306]
gi|295968763|gb|EFG82007.1| aminoacyl-tRNA hydrolase [Corynebacterium ammoniagenes DSM 20306]
Length = 177
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 102/164 (62%), Gaps = 6/164 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF--FPAWKKKFHAEISEGQLDGLRTILI 59
+V GLGNPG +Y RHNIGF + + H F A K+ +A+++E + G + I+
Sbjct: 6 LLVVGLGNPGPKYERTRHNIGFDAAEELAKSHGGNFSAHKRT-NADVAEINIRGRKVIVA 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+TFMN+SG ++ + N++K+ + N +VIHD+LD+DFG +RL+ GGGD GHNGL+ +
Sbjct: 65 KPRTFMNVSGGAVKALANYFKI-SPANIVVIHDELDMDFGEVRLRRGGGDHGHNGLRDTT 123
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
+ G K Y RL GIGRPP VL F+ E LPII
Sbjct: 124 KALGTKEYYRLSCGIGRPPGRMAPAAFVLKPFARKE-LEELPII 166
>gi|328956314|ref|YP_004373647.1| peptidyl-tRNA hydrolase [Coriobacterium glomerans PW2]
gi|328456638|gb|AEB07832.1| peptidyl-tRNA hydrolase [Coriobacterium glomerans PW2]
Length = 212
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 94/160 (58%), Gaps = 9/160 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT------ 56
++AGLGNPG EY E RHN GF +D + WK + AE++ L R
Sbjct: 11 MIAGLGNPGEEYSETRHNAGFQTVDELARRWQVTYWKNQLGAEVATIALSDERAGGEARE 70
Query: 57 -ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L+KPQ+FMN SG + ++ Y + E LVIHD+LD+ G +R+K GGG AGHNGL
Sbjct: 71 VVLVKPQSFMNTSGGPISKLAAAYGIEPGE-LLVIHDELDIPAGDVRVKIGGGHAGHNGL 129
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+SI +K G +++ R+R+GIG+PP + VL F E
Sbjct: 130 RSIIDKLGSRDFARIRVGIGKPPGKMSVADFVLRRFRPRE 169
>gi|314932724|ref|ZP_07840094.1| aminoacyl-tRNA hydrolase [Staphylococcus caprae C87]
gi|313654554|gb|EFS18306.1| aminoacyl-tRNA hydrolase [Staphylococcus caprae C87]
Length = 190
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 105/170 (61%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF ID I + F K+KF + +L+G + + I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVIDYILERNQFTLDKQKFKGAYTIERLNGDKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +MN+Y + E+ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVAPLMNYYNVEP-EDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR+RIG+GRP + + +VL FS E + +I++ AR++
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMSVPDYVLQRFSKEEMVTMDKVIEHAARAV 169
>gi|257871349|ref|ZP_05651002.1| peptidyl-tRNA hydrolase [Enterococcus gallinarum EG2]
gi|257805513|gb|EEV34335.1| peptidyl-tRNA hydrolase [Enterococcus gallinarum EG2]
Length = 186
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 103/169 (60%), Gaps = 2/169 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN+GFM +D + + F AEI+E ++G + +L+K
Sbjct: 1 MKMIIGLGNPGKKYEKTKHNVGFMVVDALAEKYQATFKSSAFEAEIAEFFMNGEKIMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M +Y + E +VI+DDLDL G +RL+ G GHNG+KS+
Sbjct: 61 PQTFMNESGRAVGPLMTYYGV-YPEEIVVIYDDLDLALGKIRLRQKGSAGGHNGMKSLIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
G + + R+++GI RP ++ HVL F+ ++ +L +D A +
Sbjct: 120 HLGTSVFDRIKVGIDRPQPGRTVVDHVLSPFAKEDQPMILQSLDKAAAA 168
>gi|77411304|ref|ZP_00787653.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae CJB111]
gi|77162640|gb|EAO73602.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae CJB111]
Length = 191
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 102/177 (57%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HNIGFM +DRI + K F AEI ++G + IKP
Sbjct: 4 MIVGLGNPGSKYNDTKHNIGFMAVDRIVKNLDVNFTEDKNFKAEIGSDFINGEKIYFIKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + +++ ++I+DDLD++ G +R + G GHNG+KSI
Sbjct: 64 TTFMNNSGIAVKALLTYYNIS-IKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R+++GIGRP +I HVLG F + + +D + ++ + D
Sbjct: 123 LGTQEFDRIKVGIGRPNGRMTVINHVLGKFDKNDEIMISNTLDKVDNAVNYYLQTND 179
>gi|300813505|ref|ZP_07093847.1| aminoacyl-tRNA hydrolase [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300512384|gb|EFK39542.1| aminoacyl-tRNA hydrolase [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 192
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 100/155 (64%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+F++AGLGNPG +Y + +HNIGF +D+I K KF + E ++ R IL+K
Sbjct: 4 LFVIAGLGNPGKDYEKTKHNIGFSTVDKIAEKLSVNMNKIKFKGLLGETRIGQNRLILLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-S 119
PQTFMN SG+S+ ++FYK+ +++N +VI DD+D++FG L++K G HNGLKSI +
Sbjct: 64 PQTFMNNSGESIRMCLDFYKV-DVKNLIVIVDDIDINFGQLKIKKEGSAGTHNGLKSIVN 122
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
K + R+++GIG+ + + VL NFSS +
Sbjct: 123 HLSSKGFPRIKVGIGQKKEGEDLANFVLSNFSSND 157
>gi|239825632|ref|YP_002948256.1| peptidyl-tRNA hydrolase [Geobacillus sp. WCH70]
gi|259535195|sp|C5D374|PTH_GEOSW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|239805925|gb|ACS22990.1| peptidyl-tRNA hydrolase [Geobacillus sp. WCH70]
Length = 186
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 98/163 (60%), Gaps = 2/163 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG EY + RHN GFM ID + KFH ++ + G + L K
Sbjct: 1 MKLFVGLGNPGKEYEQTRHNAGFMVIDELAKRWNISFQTTKFHGMMASTVIFGEKVALCK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M++Y + ++++ +VI+DDLDL G +RL+ G GHNG+KS+
Sbjct: 61 PLTYMNLSGECVRPLMDYYHI-DVDDVIVIYDDLDLPPGKIRLRMKGSSGGHNGIKSLIH 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
G + +KR+RIGIGRP + I +VLG F+ E ++ I
Sbjct: 120 HLGTQEFKRVRIGIGRPANGQKITDYVLGRFTKEESDAVMEAI 162
>gi|330686062|gb|EGG97684.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis VCU121]
Length = 190
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 107/170 (62%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF ID I H F K+KF + +++G + +LI+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVIDYILERHNFTLDKQKFKGAYTIERMNGDKVLLIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + ++++ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVAPLMDYYNI-DVDDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR+RIG+GRP + + +VL FS E + +I++ A ++
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMSVPDYVLQRFSKEEMTTMEKVIEHSANAV 169
>gi|325479254|gb|EGC82350.1| aminoacyl-tRNA hydrolase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 193
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 98/155 (63%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+ + GLGNPG +Y RHN GF+ ID + + K KF + +G + G + +L+K
Sbjct: 1 MYCIVGLGNPGLKYENTRHNAGFLTIDYLANKFGIDVKKSKFKSLYGQGVISGQKVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ E++NFYK +++ +VI+DD+D++FGT+R++ G HNG+KSI
Sbjct: 61 PQTYMNNSGEAVREIINFYKF-DIDKLIVIYDDIDIEFGTIRIRKKGSAGTHNGMKSIIY 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ + + R++I +G+ P+ + VL F+ E
Sbjct: 120 QIQDDKFPRIKIAVGKKPEYMDLANFVLSGFTEKE 154
>gi|146296228|ref|YP_001179999.1| aminoacyl-tRNA hydrolase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|167011991|sp|A4XIS3|PTH_CALS8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145409804|gb|ABP66808.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 189
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 106/184 (57%), Gaps = 4/184 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+AGLGNPG Y RHN GF+ ID + K KF + + +L+KP
Sbjct: 3 YIIAGLGNPGERYTFTRHNAGFLAIDYLAQAFNTKVDKIKFKGLTGSFEYADKKVLLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG S++E +NFYK+ E +VI+DD+ D G ++++ G D GHNG+KSI ++
Sbjct: 63 MTYMNSSGDSIVEAVNFYKVKP-EKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQR 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + + R+RIGIG P + ++++VL F E+ + I+ A+ + +L +
Sbjct: 122 LGTEEFPRIRIGIGVPKE--DMVKYVLSEFEDYEKQKIFRAIEKAAQGIKILLESGIDRA 179
Query: 181 LNHI 184
+N+I
Sbjct: 180 MNYI 183
>gi|125553210|gb|EAY98919.1| hypothetical protein OsI_20874 [Oryza sativa Indica Group]
Length = 235
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 96/156 (61%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG Y RHN+GF ID I K+F + + +G + + +L KP
Sbjct: 41 WLLIGLGNPGRMYKGTRHNVGFEMIDAIAEAEGISVSSKQFKSMVGKGLIGDVPVMLAKP 100
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QT+MN SG+S+ ++++++K+P L LVI+DDLD+ F LRL GG GHNG++SI
Sbjct: 101 QTYMNASGESVAQLVSYFKIP-LSQVLVIYDDLDIPFAKLRLLPKGGHGGHNGMRSIINH 159
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K +++ RLRIGIGRP I VL +F+ E+
Sbjct: 160 LKQSRDFPRLRIGIGRPTGKLDAIGFVLRSFTKEEQ 195
>gi|307150148|ref|YP_003885532.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 7822]
gi|306980376|gb|ADN12257.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 7822]
Length = 210
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 103/170 (60%), Gaps = 4/170 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTI-LIK 60
++ GLGNP +Y + RHNIGF +D + S+ K+F +EG + I L+K
Sbjct: 14 LIIGLGNPEQKYEKTRHNIGFEAVDVLAKSWQLSWQQNKRFQGLFTEGMGASDKKIRLLK 73
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ V+++YKLP E+ LVI+DD+DL G +RL+ G GHNG+KSI
Sbjct: 74 PLTYMNRSGESVRAVLDWYKLPP-ESILVIYDDMDLPLGRIRLRLSGSAGGHNGIKSIIS 132
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +++ RLRIGIG+ I HVLG FS+ E + I+ + +++
Sbjct: 133 HVGSQDFPRLRIGIGKSNGKKETISHVLGRFSADETEVIAKILQLVEQTV 182
>gi|239637488|ref|ZP_04678462.1| peptidyl-tRNA hydrolase [Staphylococcus warneri L37603]
gi|239596933|gb|EEQ79456.1| peptidyl-tRNA hydrolase [Staphylococcus warneri L37603]
Length = 190
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 107/170 (62%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF ID I H F K+KF + +++G + +LI+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVIDYILERHRFTLDKQKFKGAYTIERMNGDKVLLIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + ++++ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVAPLMDYYNV-DVDDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR+RIG+GRP + + +VL FS E + +I++ A ++
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMSVPDYVLQRFSKEEMITMEKVIEHSANAV 169
>gi|261855770|ref|YP_003263053.1| peptidyl-tRNA hydrolase [Halothiobacillus neapolitanus c2]
gi|261836239|gb|ACX96006.1| peptidyl-tRNA hydrolase [Halothiobacillus neapolitanus c2]
Length = 194
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 97/159 (61%), Gaps = 5/159 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF--FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y RHN GF ID + + H+ + KFH E+ + + LIK
Sbjct: 5 LIVGLGNPGSKYESTRHNAGFWFIDEL-ARHWGGHLSSDTKFHCEMLRIFVKQVDRRLIK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ V NFYK+P E+ LV+HD+LDL G ++LK GG GHNGLK I
Sbjct: 64 PQTFMNLSGKSVAAVANFYKIP-AESILVVHDELDLLPGKMKLKIGGSHGGHNGLKDIQA 122
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+ G N+ RLRIGIG P ++ VL N + ER +
Sbjct: 123 QLGTPNFWRLRIGIGHPGHRDQVVGFVLTNPPASERTLI 161
>gi|319746178|gb|EFV98448.1| aminoacyl-tRNA hydrolase [Streptococcus agalactiae ATCC 13813]
Length = 195
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 101/177 (57%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HNIGFM +DRI K F AEI ++G + IKP
Sbjct: 8 MIVGLGNPGSKYNDTKHNIGFMAVDRIVKKLDVNFTEDKNFKAEIGSDFINGEKIYFIKP 67
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + +++ ++I+DDLD++ G +R + G GHNG+KSI
Sbjct: 68 TTFMNNSGIAVKALLTYYNIS-IKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAH 126
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R+++GIGRP +I HVLG F + + +D + ++ + D
Sbjct: 127 LGTQEFDRIKVGIGRPNGRMTVINHVLGKFDKNDEIMISNTLDKVDNAVNYYLQTND 183
>gi|223044417|ref|ZP_03614450.1| peptidyl-tRNA hydrolase [Staphylococcus capitis SK14]
gi|222442206|gb|EEE48318.1| peptidyl-tRNA hydrolase [Staphylococcus capitis SK14]
Length = 190
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 104/170 (61%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF ID I + F K+KF + +L+G + + I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVIDYILERNQFTLDKQKFKGAYTIERLNGDKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +MN+Y + E+ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVAPLMNYYNVEP-EDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR+RIG+GRP + +VL FS E + +I++ AR++
Sbjct: 120 MLGTDQFKRIRIGVGRPTSGMSVPDYVLQRFSKEEMVTMDKVIEHAARAV 169
>gi|77407704|ref|ZP_00784459.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae COH1]
gi|77173703|gb|EAO76817.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae COH1]
Length = 191
Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 101/177 (57%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HNIGFM +DRI K F AEI ++G + IKP
Sbjct: 4 MIVGLGNPGSKYNDTKHNIGFMAVDRIVKKLDVNFTEDKNFKAEIGSDFINGEKIYFIKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + +++ ++I+DDLD++ G +R + G GHNG+KSI
Sbjct: 64 TTFMNNSGIAVKALLTYYNIS-IKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R+++GIGRP +I HVLG F + + +D + ++ + D
Sbjct: 123 LGTQEFDRIKVGIGRPNGRMTVINHVLGKFDKNDEIMISNTLDKVDNAVNYYLQTND 179
>gi|255325404|ref|ZP_05366508.1| aminoacyl-tRNA hydrolase [Corynebacterium tuberculostearicum SK141]
gi|255297490|gb|EET76803.1| aminoacyl-tRNA hydrolase [Corynebacterium tuberculostearicum SK141]
Length = 197
Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 98/157 (62%), Gaps = 5/157 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILI 59
+V GLGNPG +Y RHNIGF D + + + KK + E++EG G + I
Sbjct: 25 LLVVGLGNPGPKYAGTRHNIGFDVADEL-AGELMSGFSVHKKTNTEVAEGMAGGRKIICA 83
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP++FMNLSG + + ++ L + + +V+HD+L+LDFGT++L+ GGGD GHNGL+S +
Sbjct: 84 KPRSFMNLSGGPIKALAQYFHL-SAADIIVVHDELELDFGTIKLRQGGGDHGHNGLRSTT 142
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ G K+Y+RL +GIGRPP VL ++ E+
Sbjct: 143 KSLGTKDYQRLSVGIGRPPGRMDPASFVLKPWAKQEK 179
>gi|116490295|ref|YP_809839.1| peptidyl-tRNA hydrolase [Oenococcus oeni PSU-1]
gi|116091020|gb|ABJ56174.1| peptidyl-tRNA hydrolase [Oenococcus oeni PSU-1]
Length = 190
Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 101/165 (61%), Gaps = 4/165 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
IV GLGN G +Y NRHN+GFM +D + + + K+ HA ++ ++ + L+KP
Sbjct: 4 IVVGLGNIGAKYAHNRHNVGFMAVDELAARLQANFSLKQNLHAFVASTHIEEEKVYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-SE 120
T MN SG ++ V+N++ ++ + +V DD+D D+G LR+K G GHNGLKSI S+
Sbjct: 64 TTMMNDSGIAVKAVLNYFG-GDVNDLIVFVDDIDRDYGQLRIKKSGASGGHNGLKSIVSQ 122
Query: 121 KCGKNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDN 164
+ + R+RIG GRP + +I+HVLG+FS + + P IDN
Sbjct: 123 IASQEFLRIRIGTGRPAHNPQAVIKHVLGDFSPLQLELVQPEIDN 167
>gi|315640550|ref|ZP_07895658.1| aminoacyl-tRNA hydrolase [Enterococcus italicus DSM 15952]
gi|315483754|gb|EFU74242.1| aminoacyl-tRNA hydrolase [Enterococcus italicus DSM 15952]
Length = 192
Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 99/152 (65%), Gaps = 4/152 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN+GFM +D+I + K F AE+++ +G + +L+K
Sbjct: 1 MKMIVGLGNPGKKYEQTKHNVGFMVVDQIANQENSVFKKTAFEAEVADFFSNGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKL-PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-I 118
PQTFMN SG+++ +M ++ + P E +V++DDLDL G +RL+ G GHNG+KS I
Sbjct: 61 PQTFMNESGRAVGPLMTYFGVYP--EELVVVYDDLDLQVGKIRLRQKGSAGGHNGIKSII 118
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNF 150
S + +KR+++GIGRP +++HVL F
Sbjct: 119 SHLDSQTFKRVKVGIGRPKGKQTVVQHVLSPF 150
>gi|164688874|ref|ZP_02212902.1| hypothetical protein CLOBAR_02522 [Clostridium bartlettii DSM
16795]
gi|164602078|gb|EDQ95543.1| hypothetical protein CLOBAR_02522 [Clostridium bartlettii DSM
16795]
Length = 183
Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 98/160 (61%), Gaps = 2/160 (1%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFM 65
GLGNPG +Y + RHN+GF ID + + K K A I EG++ + IL+KP T+M
Sbjct: 2 GLGNPGDKYEKTRHNVGFNVIDLLAKEYSIDVSKIKHKALIGEGRVGTEKVILVKPMTYM 61
Query: 66 NLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN 125
NLSG+S+ ++ N+Y + +LEN +VI+DD+DLD G +R++ G HNG++SI + G N
Sbjct: 62 NLSGESVADICNYYNI-DLENLIVIYDDIDLDVGKIRIRKKGSGGTHNGMRSIIKCLGSN 120
Query: 126 -YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
+ R+R+GI +P + + VL FS + L +N
Sbjct: 121 EFPRVRVGISKPKNGQDLADFVLSRFSKEDEKSLQESFEN 160
>gi|227504124|ref|ZP_03934173.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
gi|227199281|gb|EEI79329.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
Length = 182
Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 103/164 (62%), Gaps = 6/164 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI--HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
F++ GLGNPG +Y RHNIGF +D I ++ F KK + E++E +L + +L
Sbjct: 4 FLIVGLGNPGPKYAGTRHNIGFDVVDEIVGQNYTNFSVHKKS-NTELAETRLGSAKLVLA 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP++FMNLSG + ++ ++ + N +V+HD+L+LDFG ++ + GGGD GHNGL+S +
Sbjct: 63 KPRSFMNLSGGPIKALLQYFSI-NPAQLIVVHDELELDFGVVKHRFGGGDHGHNGLRSTT 121
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
+ G K+Y+RL +GIGRPP VL +S E +PII
Sbjct: 122 KSLGTKDYQRLSVGIGRPPGRMDPASFVLKPWSKQENA-EIPII 164
>gi|290889682|ref|ZP_06552771.1| hypothetical protein AWRIB429_0161 [Oenococcus oeni AWRIB429]
gi|290480679|gb|EFD89314.1| hypothetical protein AWRIB429_0161 [Oenococcus oeni AWRIB429]
Length = 190
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 101/165 (61%), Gaps = 4/165 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
IV GLGN G +Y NRHN+GFM +D + + + K+ HA ++ ++ + L+KP
Sbjct: 4 IVVGLGNIGAKYAHNRHNVGFMAVDELAARLQANFSLKQNLHAFVASTHVEEEKVYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-SE 120
T MN SG ++ V+N++ ++ + +V DD+D D+G LR+K G GHNGLKSI S+
Sbjct: 64 TTMMNDSGIAVKAVLNYFG-GDVNDLIVFVDDIDRDYGQLRIKKSGASGGHNGLKSIVSQ 122
Query: 121 KCGKNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDN 164
+ + R+RIG GRP + +I+HVLG+FS + + P IDN
Sbjct: 123 IASQEFLRIRIGTGRPAHNPQAVIKHVLGDFSPLQLELVQPEIDN 167
>gi|296122873|ref|YP_003630651.1| peptidyl-tRNA hydrolase [Planctomyces limnophilus DSM 3776]
gi|296015213|gb|ADG68452.1| peptidyl-tRNA hydrolase [Planctomyces limnophilus DSM 3776]
Length = 191
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 91/156 (58%), Gaps = 2/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y RHNIG+ + PA K +F A E L G+ IL++
Sbjct: 1 MKCIVGLGNPGGKYVGTRHNIGWEVTAELSRRGGAPAGKSRFDAITREVVLKGVPVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ ++ FYK+ + ++L++ DDL+L G LR++ GG G GL I +
Sbjct: 61 PQTFMNLSGRSVGQIAKFYKM-SPADFLIVCDDLNLPLGKLRVRAGGSSGGQKGLADILQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + RLR+G+GRPP T +VL F ER
Sbjct: 120 VLGTDAVPRLRLGVGRPPGTMDAAAYVLAQFRKDER 155
>gi|242309278|ref|ZP_04808433.1| peptidyl-tRNA hydrolase [Helicobacter pullorum MIT 98-5489]
gi|239524319|gb|EEQ64185.1| peptidyl-tRNA hydrolase [Helicobacter pullorum MIT 98-5489]
Length = 194
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 111/187 (59%), Gaps = 8/187 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
MF++ GLGN G +Y NRHNIGF +D I + + K F E+ + + +L+
Sbjct: 1 MFLIVGLGNIGDKYKNNRHNIGFRVVDALISNLNAIKQSDKNFEGELYKSS----QILLL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S+ V NFYK+ ++ LVIHD+LDL FG ++ K GGG GHNGLKSI
Sbjct: 57 KPSTYMNLSGKSVSAVKNFYKIKDM---LVIHDELDLPFGVIKFKFGGGSGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG Y R+R GIG+P +I VLG+FS E + +I+ R +AK ++
Sbjct: 114 NLCGNEYYRMRYGIGKPSTKEQVIDWVLGDFSKEEENDNIELIEYCMRVALEIAKLQNPD 173
Query: 180 FLNHIVS 186
L+ +S
Sbjct: 174 ELSSKIS 180
>gi|73663563|ref|YP_302344.1| peptidyl-tRNA hydrolase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|119391016|sp|Q49V11|PTH_STAS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|72496078|dbj|BAE19399.1| peptidyl-tRNA hydrolase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 190
Score = 124 bits (311), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 106/170 (62%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + + RHNIGF ID + + F K+KF + +L G + + I+
Sbjct: 1 MKCIVGLGNIGKRFEQTRHNIGFEVIDFMLEQNRFSLDKQKFKGAYTIERLAGEKVMFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M +Y + ++E+ +V++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVAPLMKYYDI-DIEDLIVLYDDLDLPQGEIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR+RIG+ RP + I+ +VL FS+ E + +I++ AR++
Sbjct: 120 MLGTDQFKRIRIGVDRPSNGMAIVDYVLQKFSNQEMETMNKVIEHSARAI 169
>gi|229542277|ref|ZP_04431337.1| peptidyl-tRNA hydrolase [Bacillus coagulans 36D1]
gi|229326697|gb|EEN92372.1| peptidyl-tRNA hydrolase [Bacillus coagulans 36D1]
Length = 185
Score = 124 bits (311), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 97/156 (62%), Gaps = 2/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y RHNIGF ++ + P + KF +E ++ + +L+K
Sbjct: 1 MKCIVGLGNPGAQYEHTRHNIGFEVVNLLAERLQAPFKQSKFKGLCAETTVNSGKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ VM++Y+L + LV++DDLDL G +RL+ G GHNG+KSI
Sbjct: 61 PMTYMNLSGESVKAVMDYYRL-GTGDLLVVYDDLDLPPGKIRLRQKGSAGGHNGIKSIIH 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + + R+RIGIGRP A++ +VLG FS +R
Sbjct: 120 HLGTQEFNRIRIGIGRPDRDAYMPDYVLGRFSKEDR 155
>gi|311740786|ref|ZP_07714613.1| aminoacyl-tRNA hydrolase [Corynebacterium pseudogenitalium ATCC
33035]
gi|311304306|gb|EFQ80382.1| aminoacyl-tRNA hydrolase [Corynebacterium pseudogenitalium ATCC
33035]
Length = 197
Score = 124 bits (311), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 98/160 (61%), Gaps = 11/160 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLRT 56
+V GLGNPG +Y RHNIGF D + SF KK + E++EG G +
Sbjct: 25 LLVVGLGNPGPKYAGTRHNIGFDVADELAGEIMSSFSVH----KKTNTEVAEGMAGGRKI 80
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
I KP++FMNLSG + + ++ L + + +V+HD+L+LDFGT++L+ GGGD GHNGL+
Sbjct: 81 ICAKPRSFMNLSGGPIKALSQYFHL-SPTDIIVVHDELELDFGTVKLRKGGGDHGHNGLR 139
Query: 117 SISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
S ++ G K+Y+RL IGIGRPP VL ++ E+
Sbjct: 140 STTKSLGTKDYQRLSIGIGRPPGRMDPASFVLKPWAKQEK 179
>gi|163791050|ref|ZP_02185471.1| peptidyl-tRNA hydrolase [Carnobacterium sp. AT7]
gi|159873695|gb|EDP67778.1| peptidyl-tRNA hydrolase [Carnobacterium sp. AT7]
Length = 191
Score = 124 bits (311), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 102/168 (60%), Gaps = 3/168 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HNIGF+ +D H K KF A +E + + +L+K
Sbjct: 1 MKMIVGLGNPGSKYKDTKHNIGFITLDEFAFQHKMVFNKTKFEAIYAEAFIGSEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
PQTFMN SG+++ +M+++ + +E+ +V++DDLDL G LRL+ G GHNG+KS I
Sbjct: 61 PQTFMNDSGRAVRPLMDYFNV-EIEDLIVVYDDLDLPVGKLRLRQKGSAGGHNGIKSLIQ 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE-RYFLLPIIDNIA 166
++ R+RIGI RP +++HVL F + LL I D++A
Sbjct: 120 HLATADFNRVRIGIDRPLGKQTVVQHVLSGFPKNQHEELLLAIKDSVA 167
>gi|289449607|ref|YP_003474745.1| aminoacyl-tRNA hydrolase [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184154|gb|ADC90579.1| aminoacyl-tRNA hydrolase [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 192
Score = 124 bits (311), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 100/168 (59%), Gaps = 2/168 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +YC HN GFM ++ + + P K + I +G + G T+L+ PQ
Sbjct: 6 VIVGLGNPGPKYCRTWHNCGFMALEYLAQKYDIPIRTAKHKSLIGKGIIVGKPTLLVCPQ 65
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+++ + +FYKLP L+ ++++DDLDL G RL+ G HNG++SI ++
Sbjct: 66 TFMNLSGEAVRAIRDFYKLP-LDKIMIVYDDLDLPVGATRLRLQGSAGTHNGMRSIVQQL 124
Query: 123 GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G ++ R+R+GIG P+ ++ +VL + L I++ A L
Sbjct: 125 GSGDFPRMRLGIGPKPEYLPLVDYVLSKVGKAQEKPLFAAIEHAAAGL 172
>gi|331268337|ref|YP_004394829.1| aminoacyl-tRNA hydrolase [Clostridium botulinum BKT015925]
gi|329124887|gb|AEB74832.1| Aminoacyl-tRNA hydrolase [Clostridium botulinum BKT015925]
Length = 186
Score = 124 bits (310), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 106/178 (59%), Gaps = 3/178 (1%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFM 65
GLGNPG EY RHN+GF I+ + + +KKF +G + G + IL+KP T+M
Sbjct: 2 GLGNPGKEYEHTRHNVGFDAIELLAEKYNIEFNRKKFKGMYGDGTIAGEKVILLKPLTYM 61
Query: 66 NLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN 125
NLSG+S+ EVM+FYK+ N E+ +VI+DD+ L+ G +R++ G GHNG+K+I +
Sbjct: 62 NLSGESVREVMDFYKITN-EDIIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAHLNTD 120
Query: 126 -YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
+ R+++G+G P T +++ HVLG F + L + ++ ++ ++ +N
Sbjct: 121 HFPRVKVGVGHPVKT-NLVSHVLGKFEKEDECKLNKTFEAACNAVQIIIEKGTAEAMN 177
>gi|210634808|ref|ZP_03298314.1| hypothetical protein COLSTE_02241 [Collinsella stercoris DSM 13279]
gi|210158612|gb|EEA89583.1| hypothetical protein COLSTE_02241 [Collinsella stercoris DSM 13279]
Length = 209
Score = 124 bits (310), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 94/160 (58%), Gaps = 9/160 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEIS-------EGQLDGLR 55
+VAGLGNPG EY + RHN GF +D + S WK + AE++ E +
Sbjct: 11 MVAGLGNPGDEYADTRHNAGFKAVDVLASQAGVSYWKNQAGAEVALINVNDPEAEGGKRE 70
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L+KPQ++MN SG + ++ YK+ E LVIHD+LD+ G +R+K GGG AGHNGL
Sbjct: 71 VVLVKPQSYMNTSGGPISKLCAQYKV-KPEELLVIHDELDIPAGDVRVKVGGGHAGHNGL 129
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+SI +K G +++ R+R GIG PP + VL S E
Sbjct: 130 RSIIDKLGSRDFSRIRAGIGDPPGRMPVADFVLKQLRSRE 169
>gi|223933456|ref|ZP_03625441.1| Aminoacyl-tRNA hydrolase [Streptococcus suis 89/1591]
gi|302023114|ref|ZP_07248325.1| peptidyl-tRNA hydrolase [Streptococcus suis 05HAS68]
gi|330831856|ref|YP_004400681.1| peptidyl-tRNA hydrolase [Streptococcus suis ST3]
gi|223897894|gb|EEF64270.1| Aminoacyl-tRNA hydrolase [Streptococcus suis 89/1591]
gi|329306079|gb|AEB80495.1| peptidyl-tRNA hydrolase [Streptococcus suis ST3]
Length = 189
Score = 124 bits (310), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 104/177 (58%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y E +HN+GFM +D+I K F A+I +DG + L+KP
Sbjct: 4 LIIGLGNPGDRYFETKHNVGFMLLDKIAKRENVTFNHDKIFQADIGTTFIDGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ +M +Y L + + LV +DDLD+ G +R + G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALMAYYGL-DATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R++IGIGRP ++ HVL F + +R + +D + +++ + + +D
Sbjct: 123 IGTQEFDRIKIGIGRPKGKMSVVNHVLSGFDTEDRIEIDLALDKLDKAVNVYLEEDD 179
>gi|166363429|ref|YP_001655702.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa NIES-843]
gi|166085802|dbj|BAG00510.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa NIES-843]
Length = 208
Score = 124 bits (310), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 112/178 (62%), Gaps = 9/178 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQ--LDGLRTIL 58
++ GLGNP +Y RHNIGF +D + + + +W+ K+F I+EG L G + L
Sbjct: 14 LIIGLGNPEPKYDRTRHNIGFEAVDSL-ARDWGLSWQENKRFQGFIAEGDSPLPG-KIRL 71
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KPQT+MN SGQS+ V+++YKL E+ LVI+DD+DL G LR++ G GHNG+KS+
Sbjct: 72 LKPQTYMNRSGQSVRSVLDWYKLAP-ESILVIYDDMDLPLGRLRIRLSGSAGGHNGIKSM 130
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G +N+ RLRIGIG+ + A I HVLG F+ E +L ++D +++ L K+
Sbjct: 131 IAHVGTENFARLRIGIGKSTEKA-TISHVLGRFTPQENEVILKVLDLSRKAIELGLKQ 187
>gi|319654944|ref|ZP_08009018.1| peptidyl-tRNA hydrolase [Bacillus sp. 2_A_57_CT2]
gi|317393369|gb|EFV74133.1| peptidyl-tRNA hydrolase [Bacillus sp. 2_A_57_CT2]
Length = 186
Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 100/169 (59%), Gaps = 6/169 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHNIGF ID + P + K G ++G + L+K
Sbjct: 1 MKLIVGLGNPGKQYDKTRHNIGFDVIDVLSDRLNIPLNQAKLKGVFGTGYVNGEKVFLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ VM+++++ N + +VI+DDLDL G +RL+ G GHNG+KS
Sbjct: 61 PLTYMNLSGESIRAVMDYFEI-NDDELVVIYDDLDLPVGKIRLRQKGSAGGHNGIKSTIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
G + + R+R+GI RPP + +VLG F+ E+ I+D A+
Sbjct: 120 HLGTQEFNRIRVGIDRPPSGMKVPDYVLGRFTKEEQ----AIMDETAKK 164
>gi|169347360|ref|ZP_02866298.1| hypothetical protein CLOSPI_00075 [Clostridium spiroforme DSM 1552]
gi|169293977|gb|EDS76110.1| hypothetical protein CLOSPI_00075 [Clostridium spiroforme DSM 1552]
Length = 184
Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 103/170 (60%), Gaps = 3/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GFM ID + S + KF ++ + G IL+K
Sbjct: 1 MKLIVGLGNPGKEYAGTRHNCGFMVIDHLASKLNVDVDQNKFKGLYAKVKYHGEDIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
PQT+MNLSG+S+ VMNF+K+ E+ LVI+DDLD+ G LRL+ G GHNG+K+ I+
Sbjct: 61 PQTYMNLSGESVNAVMNFFKIDK-EDLLVIYDDLDMPVGKLRLRKTGSAGGHNGIKNIIA 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+++KR+R+GI R ++ +VL FS E + I+N A ++
Sbjct: 120 HLNSQDFKRIRVGIDRHK-YMNVADYVLSRFSKVESEAIEQGIENAANAV 168
>gi|325110026|ref|YP_004271094.1| peptidyl-tRNA hydrolase [Planctomyces brasiliensis DSM 5305]
gi|324970294|gb|ADY61072.1| peptidyl-tRNA hydrolase [Planctomyces brasiliensis DSM 5305]
Length = 192
Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 105/185 (56%), Gaps = 2/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF + + + AEI+E + G +T+L+
Sbjct: 1 MKVIVGLGNPGGKYEGTRHNVGFEVLYELARKWQASGVTRAHEAEIAEVHVAGEKTLLVA 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ ++ FYK+ +LE+ LVI DDL+L G LRL+ G G G++ I
Sbjct: 61 PQTFMNLSGRSVGSLVKFYKV-DLEDLLVISDDLNLPCGQLRLRASGSSGGQKGIRDIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ RLR+GIGRPP + VL F + ER + + + ++ L + +
Sbjct: 120 HLGTEDFPRLRVGIGRPPGRMDVSTFVLKRFLAEERETMDLTVRDAVDAVELWLREGVTA 179
Query: 180 FLNHI 184
+N +
Sbjct: 180 AMNKV 184
>gi|241896608|ref|ZP_04783904.1| peptidyl-tRNA hydrolase [Weissella paramesenteroides ATCC 33313]
gi|241870089|gb|EER73840.1| peptidyl-tRNA hydrolase [Weissella paramesenteroides ATCC 33313]
Length = 188
Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 111/185 (60%), Gaps = 6/185 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTIL 58
M ++ GLGN G EY + RHN+GFM +D + + +K+ HA +++ +++ + +L
Sbjct: 1 MKMIVGLGNIGKEYDQTRHNVGFMTVDALAD-KYQATFKQDGAHHAFVADVRINNEKVLL 59
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MN SGQ++ ++++YKL +L + LV+ DD+D+D G LRL+ G GHNG+KSI
Sbjct: 60 VKPTTYMNDSGQAVRPLVDYYKL-DLADLLVVQDDMDMDLGRLRLRQKGSAGGHNGIKSI 118
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
+ + G + + RL+ GIG P ++ +VLG F E+ LL +D A +
Sbjct: 119 ANQLGTQKFNRLKFGIGHPAHVHQAVVDYVLGRFGKDEQPDLLAGLDKAVEIFEDFAAGK 178
Query: 177 DVSFL 181
D+ L
Sbjct: 179 DMPML 183
>gi|308274566|emb|CBX31165.1| Peptidyl-tRNA hydrolase [uncultured Desulfobacterium sp.]
Length = 201
Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 88/153 (57%), Gaps = 2/153 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++AGLGNPG Y + RHN GFM ID + P K K+ G + G+ IL KP
Sbjct: 10 LIAGLGNPGSAYAKTRHNAGFMVIDELADAFSIPVEKNKYETIYGRGLIKGIDVILAKPV 69
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
FMN SG + + N+YK+ ++ L+IHDD+DL FG +++ GG GH G+KS+ +
Sbjct: 70 AFMNRSGPPIYSLSNYYKILQ-KDILIIHDDVDLAFGRIKINPKGGSGGHKGIKSLIDTF 128
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G N R+RIGIGR + +VLG F+ E
Sbjct: 129 GNNNISRIRIGIGRSESGISVADYVLGKFNIKE 161
>gi|242371668|ref|ZP_04817242.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis M23864:W1]
gi|242350617|gb|EES42218.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis M23864:W1]
Length = 190
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 106/170 (62%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF ID + + F K+KF + +L+G + + I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVIDYLLERNQFTLDKQKFKGAYTIERLNGDKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + + E+ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVAPLMDYYNV-DTEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR+RIG+GRP + + +VL FS E + +I++ AR++
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMSVPDYVLQRFSKEEMVTMEKVIEHSARAV 169
>gi|82750209|ref|YP_415950.1| peptidyl-tRNA hydrolase [Staphylococcus aureus RF122]
gi|119391014|sp|Q2YVY3|PTH_STAAB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|82655740|emb|CAI80139.1| peptidyl-tRNA hydrolase [Staphylococcus aureus RF122]
Length = 190
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 113/187 (60%), Gaps = 5/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF +D I + F K+KF + +++G + + I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVVDYILEKNNFSLDKQKFKGAYTIERMNGDKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + N E+ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVAPIMDYYNV-NPEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + +KR+RIG+GRP + + +VL FS+ E + +I++ R++ + S
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMTVPDYVLQRFSNDEMVTMEKVIEHAGRAIEKFV---ETS 176
Query: 180 FLNHIVS 186
+H+++
Sbjct: 177 RFDHVMN 183
>gi|118473398|ref|YP_889671.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis str. MC2 155]
gi|166229422|sp|A0R3D3|PTH_MYCS2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118174685|gb|ABK75581.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis str. MC2 155]
Length = 191
Score = 123 bits (309), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 109/174 (62%), Gaps = 5/174 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILI 59
+V GLGNPG Y + RHN+GFM D + + A+K KK AE+ G+L G +L
Sbjct: 5 LLVVGLGNPGPTYAKTRHNLGFMVAD-VLAGRIGSAFKVHKKSGAEVVTGRLAGTSVVLA 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+ +MN SG+ + + FY +P + +VIHD+LD+DFG +RLK GGG+ GHNGL+S++
Sbjct: 64 KPRCYMNESGRQVGPLAKFYSVPP-QQIVVIHDELDIDFGRIRLKLGGGEGGHNGLRSVA 122
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G KN+ R+RIG+GRPP VL NF++ ER + I++ A + LL
Sbjct: 123 SALGTKNFHRVRIGVGRPPGRKDPAAFVLENFTAAERAEVPTIVEQAADATELL 176
>gi|159027229|emb|CAO89324.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 223
Score = 123 bits (309), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 112/179 (62%), Gaps = 11/179 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGL---RTI 57
++ GLGNP +Y RHNIGF +D + + + +W+ K+F I+EG DG +
Sbjct: 29 LIIGLGNPEPKYDRTRHNIGFEAVDSL-ARDWGLSWQENKRFQGFIAEG--DGPFPGKIR 85
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KPQT+MN SGQS+ V+++YKL E+ LVI+DD+DL G LR++ G GHNG+KS
Sbjct: 86 LLKPQTYMNRSGQSVRSVLDWYKLAP-ESILVIYDDMDLPLGRLRIRLSGSAGGHNGIKS 144
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+ G +N+ RLRIGIG+ + A I HVLG F+ E +L ++D +++ L K+
Sbjct: 145 MIAHVGTENFARLRIGIGKSSEKA-TISHVLGRFTPQENEVILKVLDLSRKAIELGLKQ 202
>gi|146317669|ref|YP_001197381.1| peptidyl-tRNA hydrolase [Streptococcus suis 05ZYH33]
gi|146319858|ref|YP_001199569.1| peptidyl-tRNA hydrolase [Streptococcus suis 98HAH33]
gi|253750930|ref|YP_003024071.1| peptidyl-tRNA hydrolase [Streptococcus suis SC84]
gi|253752829|ref|YP_003025969.1| peptidyl-tRNA hydrolase [Streptococcus suis P1/7]
gi|253754654|ref|YP_003027794.1| peptidyl-tRNA hydrolase [Streptococcus suis BM407]
gi|166229459|sp|A4VYI0|PTH_STRS2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229461|sp|A4VS92|PTH_STRSY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145688475|gb|ABP88981.1| Peptidyl-tRNA hydrolase [Streptococcus suis 05ZYH33]
gi|145690664|gb|ABP91169.1| Peptidyl-tRNA hydrolase [Streptococcus suis 98HAH33]
gi|251815219|emb|CAZ50783.1| peptidyl-tRNA hydrolase [Streptococcus suis SC84]
gi|251817118|emb|CAZ54839.1| peptidyl-tRNA hydrolase [Streptococcus suis BM407]
gi|251819074|emb|CAR44088.1| peptidyl-tRNA hydrolase [Streptococcus suis P1/7]
gi|292557471|gb|ADE30472.1| Peptidyl-tRNA hydrolase [Streptococcus suis GZ1]
gi|319757179|gb|ADV69121.1| peptidyl-tRNA hydrolase [Streptococcus suis JS14]
Length = 189
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 104/177 (58%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y E +HN+GFM +D+I K F A+I+ +DG + L+KP
Sbjct: 4 LIIGLGNPGDRYFETKHNVGFMLLDKIAKRENVTFNHDKIFQADIATTFIDGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ +M +Y L + + LV +DDLD+ G +R + G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALMTYYGL-DATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R++IGIGRP ++ HVL F +R + +D + +++ + + +D
Sbjct: 123 IGTQEFDRIKIGIGRPKGKMSVVNHVLSGFDIEDRIEIDLALDKLDKAVNVYLEEDD 179
>gi|111022659|ref|YP_705631.1| peptidyl-tRNA hydrolase [Rhodococcus jostii RHA1]
gi|119390996|sp|Q0S4R3|PTH_RHOSR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110822189|gb|ABG97473.1| aminoacyl-tRNA hydrolase [Rhodococcus jostii RHA1]
Length = 190
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 112/173 (64%), Gaps = 5/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF--FPAWKKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y + RHN+GFM + + F A KK AEI +G+ +G TIL K
Sbjct: 7 LVVGLGNPGPQYEKTRHNVGFMVAGVLSARMGGKFSAHKKS-GAEIVQGRFEGRPTILAK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG ++ + F+ + + N +VIHD+LDLDFGT+RLK GGG+ GHNGL+SIS
Sbjct: 66 PRSFMNLSGSAVAGLARFFSV-DPGNIVVIHDELDLDFGTIRLKQGGGEGGHNGLRSISS 124
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K+Y R R+GIGRPP +VL FSS ER L + + A ++ L+
Sbjct: 125 ALGTKDYLRTRVGIGRPPGRMDPASYVLKPFSSVERKELDLVCEESADAVELV 177
>gi|254495025|ref|ZP_01053475.2| Peptidyl-tRNA hydrolase [Polaribacter sp. MED152]
gi|213690607|gb|EAQ42903.2| Peptidyl-tRNA hydrolase [Polaribacter sp. MED152]
Length = 188
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 97/173 (56%), Gaps = 10/173 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGN G +Y RHNIGF +D + H +K +I+ + G IL+KP
Sbjct: 5 LIVGLGNIGDKYTNTRHNIGFKILDEVAEEHNVSFETEKL-GDIASYRFKGRTFILLKPS 63
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK- 121
TFMNLSG+++ M+ K+ +EN LV+ DDL++DFGT+RLK G D GHNGLK I EK
Sbjct: 64 TFMNLSGKAVKYWMDKEKIS-IENILVVTDDLNIDFGTIRLKAKGSDGGHNGLKDIQEKL 122
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
C Y R R G+G + +VLG ++ E L+ LPL AK
Sbjct: 123 CTNKYPRFRFGVGANYSKGRQVDYVLGEWNKEETSLLIE-------RLPLSAK 168
>gi|254555606|ref|YP_003062023.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum JDM1]
gi|300768956|ref|ZP_07078847.1| aminoacyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308179636|ref|YP_003923764.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|254044533|gb|ACT61326.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum JDM1]
gi|300493477|gb|EFK28654.1| aminoacyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045127|gb|ADN97670.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 185
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y + RHN+GFM +D + S KF A+++ DG + +L+K
Sbjct: 1 MKMIVGLGNIGRQYAQTRHNVGFMIVDELASKLNVTFQTSKFEAQVATAFQDGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M++Y + + + LVIHDDLDL G +RLK G GHNG+KSI
Sbjct: 61 PATYMNDSGRAVGPLMSYYNV-DPADLLVIHDDLDLPLGKVRLKQKGSAGGHNGIKSIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +++KR+++GI P + ++ +VLG F+ E
Sbjct: 120 HVGDQHFKRVKVGIDHPQKMS-VVDYVLGKFTPAE 153
>gi|68536581|ref|YP_251286.1| peptidyl-tRNA hydrolase [Corynebacterium jeikeium K411]
gi|68264180|emb|CAI37668.1| pthA [Corynebacterium jeikeium K411]
Length = 209
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 96/157 (61%), Gaps = 5/157 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA---WKKKFHAEISEGQLDGLRTIL 58
+++ GLGNPG +Y RHN+G M I + A KK + +I+E ++ G + +L
Sbjct: 31 WLIVGLGNPGDKYANTRHNVGRMVIGELLDRQVPAASLNTHKKTNTDIAEVKIAGRKVVL 90
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+P+TFMN+SG + ++ F+K+P EN +V +DDL+ D G ++L+ GGD GHNGLKSI
Sbjct: 91 AQPRTFMNVSGGPVQQLAAFFKIP-AENIIVAYDDLEGDPGAVKLRQSGGDKGHNGLKSI 149
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
++ G K+Y RL GIGRPP +VL F E
Sbjct: 150 TKSLGTKDYWRLSCGIGRPPGRMDPAAYVLKPFPKSE 186
>gi|28377423|ref|NP_784315.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum WCFS1]
gi|38257843|sp|Q88Z39|PTH_LACPL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|28270255|emb|CAD63156.1| aminoacyl-tRNA hydrolase [Lactobacillus plantarum WCFS1]
Length = 185
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y + RHN+GFM +D + S KF A+++ DG + +L+K
Sbjct: 1 MKMIVGLGNIGRQYAQTRHNVGFMIVDELASKLNVTFQTSKFEAQVATAFQDGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M++Y + + + LVIHDDLDL G +RLK G GHNG+KSI
Sbjct: 61 PATYMNDSGRAVGPLMSYYNV-DPADLLVIHDDLDLPLGKVRLKQKGSAGGHNGIKSIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +++KR+++GI P + ++ +VLG F+ E
Sbjct: 120 HVGDQHFKRVKVGIDHPQKMS-VVDYVLGKFTPAE 153
>gi|125975113|ref|YP_001039023.1| peptidyl-tRNA hydrolase [Clostridium thermocellum ATCC 27405]
gi|125715338|gb|ABN53830.1| peptidyl-tRNA hydrolase [Clostridium thermocellum ATCC 27405]
Length = 196
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+F++ GLGNPG +Y RHN+GF ++ + H K K A I +G++ G + IL K
Sbjct: 11 LFVIVGLGNPGAKYENTRHNVGFDTVEFLSKRHDIRLGKLKHKALIGDGEIGGRKVILAK 70
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
PQTFMNLSG+S+ E++ +YK+P ++N ++I+DD+DL G LRL+ G HNG++S I
Sbjct: 71 PQTFMNLSGESVREIVEWYKIP-VKNIIIIYDDIDLPVGKLRLRPKGSAGTHNGMRSVIY 129
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + + R+RIGI +PP+ +I +VL FS+ ER + ++ A ++ + K S
Sbjct: 130 QLQSEEFPRIRIGIDKPPEGWDLISYVLSRFSADERKKIDEAVEKAADAVETILKSGIDS 189
Query: 180 FLN 182
+N
Sbjct: 190 AMN 192
>gi|126653273|ref|ZP_01725384.1| peptidyl-tRNA hydrolase [Bacillus sp. B14905]
gi|126589947|gb|EAZ84076.1| peptidyl-tRNA hydrolase [Bacillus sp. B14905]
Length = 186
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 106/184 (57%), Gaps = 2/184 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+ GLGNPG Y RHNIGF ID + P KF+ + + +L+K
Sbjct: 1 MKIIVGLGNPGKPYEHTRHNIGFDVIDALAEKWGAPLTNSKFNGMYTTVHRPEGKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M+++ + ++E+ +VI+DDLDL+ G LRL+ G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECVGPLMDYFDI-DVEDLIVIYDDLDLETGKLRLRQKGSAGGHNGIKSLIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GI RPP + +VL FS ++ ++ I+ ++ + + +
Sbjct: 120 HLGTQEFNRIRVGISRPPAGMKVADYVLAKFSKEDQVYMKEAIEKSVNAVEVSLSKPFLD 179
Query: 180 FLNH 183
+NH
Sbjct: 180 VMNH 183
>gi|25027567|ref|NP_737621.1| peptidyl-tRNA hydrolase [Corynebacterium efficiens YS-314]
gi|259507026|ref|ZP_05749926.1| aminoacyl-tRNA hydrolase [Corynebacterium efficiens YS-314]
gi|46576823|sp|Q8FQV6|PTH_COREF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|23492849|dbj|BAC17821.1| putative peptidyl-tRNA hydrolase [Corynebacterium efficiens YS-314]
gi|259165304|gb|EEW49858.1| aminoacyl-tRNA hydrolase [Corynebacterium efficiens YS-314]
Length = 177
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 100/155 (64%), Gaps = 7/155 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHNIGF ++ + ++ + K+ + EI+ QL GL I+ KP
Sbjct: 7 LVVGLGNPGPKYVGTRHNIGFEVVEELVGRNYANFSVHKRSNTEIA--QLPGL--IVAKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
++FMNLSG + + +F+K+ + N LV+HD+LDLDFG ++L+ GGGD GHNGLKS S
Sbjct: 63 RSFMNLSGTPIRALCDFFKI-SPANVLVVHDELDLDFGQVKLRQGGGDHGHNGLKSTSRS 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G K+Y +L +GIGRPP VL FS E+
Sbjct: 122 LGTKDYWKLSVGIGRPPGRMDPATFVLKPFSKQEQ 156
>gi|313904442|ref|ZP_07837819.1| peptidyl-tRNA hydrolase [Eubacterium cellulosolvens 6]
gi|313470778|gb|EFR66103.1| peptidyl-tRNA hydrolase [Eubacterium cellulosolvens 6]
Length = 189
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 99/177 (55%), Gaps = 1/177 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++AGLGNPG +Y +HN+GF I + P A +G + G + +LIK
Sbjct: 1 MFLIAGLGNPGRKYDRTKHNMGFDTITELVDRWNIPQGGTDMKAMYGKGLIGGQKVMLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +N+YK+ LVI+DD+ LD G LR++ G GHNG+K+I +
Sbjct: 61 PLTYMNLSGESIAAYVNYYKVDPESELLVIYDDISLDPGQLRIRKKGSAGGHNGMKNIIQ 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G + + R+R+GIG P + +VL FS +R + I A + ++ E
Sbjct: 121 HLGTDKFARIRVGIGDKPAGWDLADYVLAPFSKADRELVDAGIGRAADAAEMIVAGE 177
>gi|282879730|ref|ZP_06288460.1| aminoacyl-tRNA hydrolase [Prevotella timonensis CRIS 5C-B1]
gi|281306399|gb|EFA98429.1| aminoacyl-tRNA hydrolase [Prevotella timonensis CRIS 5C-B1]
Length = 202
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 92/162 (56%), Gaps = 2/162 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY + RHN GF+ +D + ++ K + ++E + G + IL+KP
Sbjct: 4 YLICGLGNPGSEYADTRHNTGFIVLDALAKASNI-VFEDKRYGYVAETSIKGRKVILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + N LVI DD+ + G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENIEQ-HNLLVISDDISIPLGEFRLKASGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G+NY RLR+GIG + VLG FSS E L P ID
Sbjct: 122 IGQNYPRLRMGIGSDFQRGGQVDWVLGRFSSEEVKILQPTID 163
>gi|325568170|ref|ZP_08144611.1| aminoacyl-tRNA hydrolase [Enterococcus casseliflavus ATCC 12755]
gi|325158371|gb|EGC70522.1| aminoacyl-tRNA hydrolase [Enterococcus casseliflavus ATCC 12755]
Length = 192
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 100/169 (59%), Gaps = 2/169 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN+GFM +D + + K F AE++E L G + +L+K
Sbjct: 7 MKMIVGLGNPGKKYEKTKHNVGFMVVDALAQKYQATFKKSAFEAEVAEFFLKGEKILLVK 66
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
PQTFMN SG+S+ +M ++ + E +V++DDLDL G +RL+ G GHNG+KS I+
Sbjct: 67 PQTFMNESGRSVGPLMTYFGIYQ-EELVVVYDDLDLALGKIRLRQKGSAGGHNGIKSLIA 125
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
+ R++IGI RP ++ HVL F+ + +L ID +
Sbjct: 126 HLDSTVFDRIKIGIDRPRPGQTVVNHVLSPFAKDDLPIVLQSIDKAVEA 174
>gi|118619724|ref|YP_908056.1| peptidyl-tRNA hydrolase [Mycobacterium ulcerans Agy99]
gi|166229426|sp|A0PW66|PTH_MYCUA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118571834|gb|ABL06585.1| peptidyl-tRNA hydrolase Pth [Mycobacterium ulcerans Agy99]
Length = 191
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILI 59
+V GLGNPG Y RHN+GFM D + + +K K+ AE+ G+L +L
Sbjct: 5 LLVVGLGNPGENYARTRHNLGFMVADLLAA-RLGAKFKVHKRSGAEVVTGRLAQRSVVLA 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+ +MN SG+ + + FY +P + +VIHD+LDLDFG +RLK GGG+ GHNGL+S++
Sbjct: 64 KPRCYMNESGRQVAPLAKFYSVPP-ADLIVIHDELDLDFGRIRLKFGGGEGGHNGLRSVA 122
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G KN++R+RIGIGRPP VL NFSSPER + I + A + LL +
Sbjct: 123 AALGTKNFQRVRIGIGRPPGRKDPATFVLENFSSPERPEVPTICEQAADATELLVE 178
>gi|205371996|ref|ZP_03224814.1| peptidyl-tRNA hydrolase [Bacillus coahuilensis m4-4]
Length = 185
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 107/183 (58%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG ++ RHNIGF ID + + KF S + +G + IL+K
Sbjct: 1 MKLIVGLGNPGAKFDGTRHNIGFEVIDELAKRFNVALDQSKFKGVYSIVRHEGEKFILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++Y + ++E+ +VI+DDLDL G LRL+ G GHNG+KS
Sbjct: 61 PLTYMNLSGESIRPLMDYYDI-DIEDLVVIYDDLDLPVGKLRLRQKGSAGGHNGMKSTIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+G+ RPP + +VLG F++ E+ + ++ A + K +S
Sbjct: 120 HLGSQQFNRIRLGVDRPPSGMTVPNYVLGKFTASEQPLVEEVVKASADACEAWLKEPFLS 179
Query: 180 FLN 182
+N
Sbjct: 180 VMN 182
>gi|121603806|ref|YP_981135.1| peptidyl-tRNA hydrolase [Polaromonas naphthalenivorans CJ2]
gi|120592775|gb|ABM36214.1| peptidyl-tRNA hydrolase [Polaromonas naphthalenivorans CJ2]
Length = 230
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 100/176 (56%), Gaps = 3/176 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG EY RHN GF ID + P + K +H +++ ++G L+KP
Sbjct: 25 LFVGLGNPGPEYEATRHNAGFWWIDALSRELKAPLSLDKNYHGQVARTTVNGQTVWLLKP 84
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E LV HD+LD+ G ++LK GG AGHNGL+ I +
Sbjct: 85 LTFMNLSGKSVAALARFFKISPAE-ILVAHDELDIVPGQVKLKFGGSHAGHNGLRDIHAQ 143
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G +Y RLRIG+G P A +I VL S R + ID +++P L K E
Sbjct: 144 LGSADYWRLRIGVGHPGVKAEVINWVLKKPSQEHRVAIEDCIDRCLKAVPELLKGE 199
>gi|225023010|ref|ZP_03712202.1| hypothetical protein CORMATOL_03058 [Corynebacterium matruchotii
ATCC 33806]
gi|224944233|gb|EEG25442.1| hypothetical protein CORMATOL_03058 [Corynebacterium matruchotii
ATCC 33806]
Length = 173
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 99/162 (61%), Gaps = 6/162 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHN G M + + A++++ A ++E +L G R +
Sbjct: 1 MFLIVGLGNPGAKYERTRHNSGVMALTELAGAV---AFRRRGSALVAESRLAGHRVVFAI 57
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ FMN+SG + EV F+K+P + +V+ DDL+L+FGT+RL G D GHNGL+SI++
Sbjct: 58 PQRFMNVSGGPVKEVAGFFKIPP-QRTIVLFDDLELEFGTIRLPVLG-DHGHNGLRSITK 115
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
G +Y R +GIGRPP + VL F+ ER LPI+
Sbjct: 116 VFGADYVRAGLGIGRPPGRMPVADFVLKPFTKAERP-QLPIM 156
>gi|160895087|ref|ZP_02075861.1| hypothetical protein CLOL250_02638 [Clostridium sp. L2-50]
gi|156863518|gb|EDO56949.1| hypothetical protein CLOL250_02638 [Clostridium sp. L2-50]
Length = 185
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 104/183 (56%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF I + + +KK A G ++G + IL
Sbjct: 1 MKLIVGLGNPGTKYAGTRHNVGFSVIVGLADKYNIELSEKKHKAIYGRGMIEGEKVILAM 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E++++YK + + +V +DD+DL G LR++ G GHNG+K+I
Sbjct: 61 PQTFMNLSGESVRELVDYYKC-DPSDVIVAYDDIDLAVGKLRIREKGSAGGHNGMKNIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GIG+ PD + +VL F E + DN ++ L+ K +
Sbjct: 120 HLGTQEFVRVRVGIGKKPDRMDLADYVLSRFGKDELPEIKAGCDNAGDAIALILKDSAAA 179
Query: 180 FLN 182
+N
Sbjct: 180 AMN 182
>gi|313206339|ref|YP_004045516.1| peptidyl-tRNA hydrolase [Riemerella anatipestifer DSM 15868]
gi|312445655|gb|ADQ82010.1| peptidyl-tRNA hydrolase [Riemerella anatipestifer DSM 15868]
gi|315023205|gb|EFT36216.1| peptidyl-tRNA hydrolase [Riemerella anatipestifer RA-YM]
gi|325336217|gb|ADZ12491.1| Peptidyl-tRNA hydrolase [Riemerella anatipestifer RA-GD]
Length = 187
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 99/168 (58%), Gaps = 3/168 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHN+GF +++I P +K ++EG+ G + IL+KP
Sbjct: 3 YLIVGLGNKGDEYTETRHNVGFKVVEKIAEGIEAP-FKTANFGWVAEGKYKGRKVILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ + +P LEN LVI DDL L FGTLR+K G DAGHNGLK+I E
Sbjct: 62 DTYMNLSGNAVKFWLKKENIP-LENLLVITDDLALPFGTLRMKMKGSDAGHNGLKNIQEL 120
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
+NY RLR GI + +VLG ++ E+ L ++ ++
Sbjct: 121 LQTQNYPRLRFGISANFSEGKQVDYVLGKWTEEEQSKLPERLEQFTKA 168
>gi|88608638|ref|YP_506197.1| peptidyl-tRNA hydrolase [Neorickettsia sennetsu str. Miyayama]
gi|119390967|sp|Q2GE99|PTH_NEOSM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|88600807|gb|ABD46275.1| peptidyl-tRNA hydrolase [Neorickettsia sennetsu str. Miyayama]
Length = 194
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 110/186 (59%), Gaps = 8/186 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG Y + RHN+GFM ID + FP + KF +S G++ L KP
Sbjct: 7 FVLCGLGNPGLRYAQTRHNLGFMLIDYVRYTFSFPEFLPKFSGLLSSGRVSSFLLYLFKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMN SG+ L++++NFYK+ LEN +V HDD+DLDF +++K GGG GHNGLKS+
Sbjct: 67 VAFMNNSGRPLVQLVNFYKV-ELENVIVFHDDIDLDFAKVKIKRGGGSGGHNGLKSLDFN 125
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL----AKRED 177
G++Y R R G+GR HVL F++ E L + I +LPLL A R++
Sbjct: 126 LGRDYWRFRFGVGR--GVGDPAEHVLSRFTALELERLNKLFGFIGTNLPLLLSDIATRKE 183
Query: 178 VSFLNH 183
FLN
Sbjct: 184 -KFLNE 188
>gi|227832719|ref|YP_002834426.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
gi|227453735|gb|ACP32488.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
Length = 182
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 107/175 (61%), Gaps = 9/175 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
F+V GLGNPG +Y RHNIGF D + H + KK + +++E + + I+ K
Sbjct: 9 FLVVGLGNPGPKYTGTRHNIGFDVADELAHELFASFSVHKKTNTDVAEARRGDAKVIVAK 68
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG + + ++ +P+ ++ +V+HD+L+LDF T++ + GGGD GHNGL+S ++
Sbjct: 69 PRSFMNLSGGPIKALAQYFNVPH-DHIIVVHDELELDFATIKRRLGGGDHGHNGLRSTTK 127
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII-----DNIARSL 169
G K+Y+RL +GIGRPP VL ++ E +PII D I R+L
Sbjct: 128 SLGTKDYQRLSVGIGRPPGRMDPAAFVLKPWNKQEAQ-EIPIICADAVDEILRAL 181
>gi|256003232|ref|ZP_05428224.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 2360]
gi|281418468|ref|ZP_06249487.1| peptidyl-tRNA hydrolase [Clostridium thermocellum JW20]
gi|255992923|gb|EEU03013.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 2360]
gi|281407552|gb|EFB37811.1| peptidyl-tRNA hydrolase [Clostridium thermocellum JW20]
gi|316939279|gb|ADU73313.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 1313]
Length = 189
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+F++ GLGNPG +Y RHN+GF ++ + H K K A I +G++ G + IL K
Sbjct: 4 LFVIVGLGNPGAKYENTRHNVGFDTVEFLSKRHDIRLGKLKHKALIGDGEIGGRKVILAK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
PQTFMNLSG+S+ E++ +YK+P ++N ++I+DD+DL G LRL+ G HNG++S I
Sbjct: 64 PQTFMNLSGESVREIVEWYKIP-VKNIIIIYDDIDLPVGKLRLRPKGSAGTHNGMRSVIY 122
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + + R+RIGI +PP+ +I +VL FS+ ER + ++ A ++ + K S
Sbjct: 123 QLQSEEFPRIRIGIDKPPEGWDLISYVLSRFSADERKKIDEAVEKAADAVETILKSGIDS 182
Query: 180 FLN 182
+N
Sbjct: 183 AMN 185
>gi|119390904|sp|Q4JU39|PTH1_CORJK RecName: Full=Peptidyl-tRNA hydrolase 1; Short=PTH 1
Length = 193
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 96/157 (61%), Gaps = 5/157 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA---WKKKFHAEISEGQLDGLRTIL 58
+++ GLGNPG +Y RHN+G M I + A KK + +I+E ++ G + +L
Sbjct: 15 WLIVGLGNPGDKYANTRHNVGRMVIGELLDRQVPAASLNTHKKTNTDIAEVKIAGRKVVL 74
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+P+TFMN+SG + ++ F+K+P EN +V +DDL+ D G ++L+ GGD GHNGLKSI
Sbjct: 75 AQPRTFMNVSGGPVQQLAAFFKIP-AENIIVAYDDLEGDPGAVKLRQSGGDKGHNGLKSI 133
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
++ G K+Y RL GIGRPP +VL F E
Sbjct: 134 TKSLGTKDYWRLSCGIGRPPGRMDPAAYVLKPFPKSE 170
>gi|262182792|ref|ZP_06042213.1| peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
Length = 179
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 107/175 (61%), Gaps = 9/175 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
F+V GLGNPG +Y RHNIGF D + H + KK + +++E + + I+ K
Sbjct: 6 FLVVGLGNPGPKYTGTRHNIGFDVADELAHELFASFSVHKKTNTDVAEARRGDAKVIVAK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG + + ++ +P+ ++ +V+HD+L+LDF T++ + GGGD GHNGL+S ++
Sbjct: 66 PRSFMNLSGGPIKALAQYFNVPH-DHIIVVHDELELDFATIKRRLGGGDHGHNGLRSTTK 124
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII-----DNIARSL 169
G K+Y+RL +GIGRPP VL ++ E +PII D I R+L
Sbjct: 125 SLGTKDYQRLSVGIGRPPGRMDPAAFVLKPWNKQEAQ-EIPIICADAVDEILRAL 178
>gi|116075623|ref|ZP_01472882.1| peptidyl-tRNA hydrolase [Synechococcus sp. RS9916]
gi|116066938|gb|EAU72693.1| peptidyl-tRNA hydrolase [Synechococcus sp. RS9916]
Length = 206
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 104/181 (57%), Gaps = 10/181 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF--FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG Y RHN+GFM ++ + S F A K E++E + R L+
Sbjct: 8 LLVGLGNPGQRYAGTRHNVGFMALEALASGESARFKAMAK-LQGELAEVGVGSNRLRLLM 66
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ ++++ L + + LV+ DD+DL G LRL+ G GHNGLKS +
Sbjct: 67 PQTFMNESGRSIRAALDWFDLSS-DQVLVLVDDMDLPLGRLRLRAKGSAGGHNGLKSTIQ 125
Query: 121 KCG-KNYKRLRIGIGRPPDTAH-----IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G + + RLRIGIG P +A + HVLG+F E+ L ++D + R + L+ +
Sbjct: 126 HLGTQEFARLRIGIGAPGRSAEERRARTVSHVLGSFHQAEQSLLKDVLDEVLRGVDLIQR 185
Query: 175 R 175
+
Sbjct: 186 Q 186
>gi|257126899|ref|YP_003165013.1| peptidyl-tRNA hydrolase [Leptotrichia buccalis C-1013-b]
gi|257050838|gb|ACV40022.1| peptidyl-tRNA hydrolase [Leptotrichia buccalis C-1013-b]
Length = 188
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 96/178 (53%), Gaps = 7/178 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF+ ID ++KF + + +G + K
Sbjct: 1 MKLIVGLGNPGEQYKLTRHNIGFIFIDEYLKEKNIADIREKFKSIFVQTNYNGDKVFYQK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ E + F+K+ VI+DD+D+ FG L++K G GHNG+KSI
Sbjct: 61 PATFMNLSGEAVGEAIRFFKIDPKTELFVIYDDMDMPFGKLKIKQTGSAGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE-------RYFLLPIIDNIARSLPL 171
G + R++ GIG+P I VLG FS E R + +ID+I + +
Sbjct: 121 HVGNEFVRIKFGIGKPKTKEETIGFVLGKFSPEEKEIVKDSRERMFNLIDDIKDDMTI 178
>gi|302336814|ref|YP_003802020.1| peptidyl-tRNA hydrolase [Spirochaeta smaragdinae DSM 11293]
gi|301633999|gb|ADK79426.1| peptidyl-tRNA hydrolase [Spirochaeta smaragdinae DSM 11293]
Length = 193
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 105/172 (61%), Gaps = 9/172 (5%)
Query: 7 LGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMN 66
LGNPG Y + RHN+ +M + I S ++KKFH ++ + R +L+ P+T+MN
Sbjct: 10 LGNPGKMYAKTRHNLAWMAAEAIPSIVDL-RFQKKFHGRWADIKTGTYREVLLFPETYMN 68
Query: 67 LSGQSLLEVMNFYKL-PNLE--NYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
SG S+ +F+K+ P E N LV+HD+++L FGT+ LK GGG AGHNGL+SI+++ G
Sbjct: 69 KSGDSVSSACSFFKIDPKKEGSNLLVVHDEIELPFGTIELKRGGGTAGHNGLRSINQQTG 128
Query: 124 -KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
++ RLR+G+GRPP + VL FS E LLP + R+ P L K
Sbjct: 129 SSDFLRLRLGVGRPP-RGTVSSWVLSRFSEDEE-LLLP--KYLKRTAPFLEK 176
>gi|294462383|gb|ADE76740.1| unknown [Picea sitchensis]
Length = 256
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 93/156 (59%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG Y RHN+GF ID I + + A +G ++G +L KP
Sbjct: 62 WLLVGLGNPGKLYNGTRHNVGFEMIDTIAQAEGISVSRIQCRALFGKGHINGSPVMLAKP 121
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFMN SG+S+ ++ +YK+P L L+I DD+DL F LRL GG GHNG+KS+ +
Sbjct: 122 QTFMNASGESVGPLVAYYKIP-LNQVLLIFDDMDLPFAKLRLLPKGGHGGHNGMKSVIDH 180
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K + + RLRIGIGRPP I +VL F+ E+
Sbjct: 181 FKGNREFPRLRIGIGRPPGKMDPISYVLRPFTKGEQ 216
>gi|168704118|ref|ZP_02736395.1| peptidyl-tRNA hydrolase [Gemmata obscuriglobus UQM 2246]
Length = 213
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 97/151 (64%), Gaps = 3/151 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF ID + + + +++F A ISE + +L+K
Sbjct: 1 MKVIVGLGNPGPKYAGTRHNVGFDVIDYLANGPGVGSARERFEALISETKEGDETVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ +++FYK+P +EN LVI DDL+L G LR++ G G NGL++I E
Sbjct: 61 PLTFMNLSGRAVRAILDFYKVP-VENVLVICDDLNLPLGKLRMRIKGSHGGQNGLRNIQE 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNF 150
+ G + Y RLR+G+G+P + VLG F
Sbjct: 120 QLGTDAYCRLRVGLGQPA-VGDAVDFVLGKF 149
>gi|110004198|emb|CAK98536.1| probable peptidyl-trna hydrolase protein [Spiroplasma citri]
Length = 189
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 103/166 (62%), Gaps = 9/166 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG+EY RHNIGF+ I ++ K F+A I E ++ + + +
Sbjct: 1 MKLIVGLGNPGNEYTYTRHNIGFLAIAKLVDKFDLAKPKNAFNALIWETTINNEKVLFCQ 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG ++ ++ FYKL E+ +VI+DD D+ F ++LK G AGHNG+K + +
Sbjct: 61 PQTFMNLSGTAVYQIKQFYKLI-WEDIIVIYDDKDIPFNVIKLKKNGSSAGHNGIKDLIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRH-VLGNFSSPERYFLLPIIDN 164
K G +N+ R+RIGIG+ D R+ VLGNFS + L II+N
Sbjct: 120 KLGSENFLRIRIGIGK--DFQIPTRNWVLGNFSPAQ----LEIINN 159
>gi|257868297|ref|ZP_05647950.1| peptidyl-tRNA hydrolase [Enterococcus casseliflavus EC30]
gi|257874430|ref|ZP_05654083.1| peptidyl-tRNA hydrolase [Enterococcus casseliflavus EC10]
gi|257802411|gb|EEV31283.1| peptidyl-tRNA hydrolase [Enterococcus casseliflavus EC30]
gi|257808594|gb|EEV37416.1| peptidyl-tRNA hydrolase [Enterococcus casseliflavus EC10]
Length = 186
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 101/169 (59%), Gaps = 2/169 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN+GFM +D + + K F AE++E L+G + +L+K
Sbjct: 1 MKMIVGLGNPGKKYEKTKHNVGFMVVDALAQKYQATFKKSAFEAEVAEFFLNGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
PQTFMN SG+++ +M ++ + E +V++DDLDL G +RL+ G GHNG+KS I+
Sbjct: 61 PQTFMNESGRAVGPLMTYFGIYQ-EELVVVYDDLDLALGKIRLRQKGSAGGHNGIKSLIA 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
+ R++IGI RP ++ HVL F+ + +L ID +
Sbjct: 120 HLDSTVFDRIKIGIDRPRPGQTVVNHVLSPFAKDDLPIVLQSIDKAVEA 168
>gi|255631022|gb|ACU15875.1| unknown [Glycine max]
Length = 228
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 90/156 (57%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D I F + +G + + IL KP
Sbjct: 30 WLIVGLGNPGKKYAATRHNVGFEMVDTIAEAEGISMTTVSFKSLFGKGFIGDVPVILAKP 89
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QT+MN SG+S+ ++++YK+P L+ L I DDLDL F LRL GG GHNG+KS+
Sbjct: 90 QTYMNSSGESVGAIVSYYKIP-LKQVLEIFDDLDLPFAKLRLLPKGGHGGHNGVKSVINH 148
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K + RLRIGIGRPP + VL F+ ER
Sbjct: 149 FKGNSGFPRLRIGIGRPPGKMDPVAFVLRTFTKHER 184
>gi|258645660|ref|ZP_05733129.1| aminoacyl-tRNA hydrolase [Dialister invisus DSM 15470]
gi|260403026|gb|EEW96573.1| aminoacyl-tRNA hydrolase [Dialister invisus DSM 15470]
Length = 190
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 89/149 (59%), Gaps = 2/149 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +VAGLGNPG EY RHN+GF ID + WK AEI+ G + +L+K
Sbjct: 1 MKLVAGLGNPGKEYEHTRHNMGFDVIDELARRWSVNVWKTDMKAEIASVVRFGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG ++ + N+YK+P E+ +I DDLDL G R++ G GHNG+KS I+
Sbjct: 61 PLTYMNLSGDAVGAIANYYKIP-AEDIYIICDDLDLPAGKTRIRKKGSAGGHNGIKSLIA 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLG 148
+ + R RIG+G P D +I HVLG
Sbjct: 120 GLHTEEFVRFRIGVGHPKDGHTVIEHVLG 148
>gi|42561470|ref|NP_975921.1| peptidyl-tRNA hydrolase [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|68052964|sp|Q6MS28|PTH_MYCMS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|42492969|emb|CAE77563.1| Peptidyl-tRNA hydrolase [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|301321053|gb|ADK69696.1| aminoacyl-tRNA hydrolase [Mycoplasma mycoides subsp. mycoides SC
str. Gladysdale]
Length = 186
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY + RHN GF+ ID + + + + K++F++ I ++ + +L+K
Sbjct: 1 MKVIIGLGNIGKEYEKTRHNAGFIAIDLLLEKYNYSSVKQEFNSLIYTTIINNQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +++NFYK+ NL + ++IHDD DL+ ++ K G AGHNG+KSI
Sbjct: 61 PLTFMNNSGLAVRQIINFYKI-NLNDLIIIHDDKDLNISRIQFKKDGSSAGHNGIKSIIN 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+N+ RLRIG+ + P I+ VL FS E
Sbjct: 120 NLQTQNFYRLRIGVNQVPKEWKIVDWVLSKFSDEE 154
>gi|260577724|ref|ZP_05845659.1| aminoacyl-tRNA hydrolase [Corynebacterium jeikeium ATCC 43734]
gi|258604119|gb|EEW17361.1| aminoacyl-tRNA hydrolase [Corynebacterium jeikeium ATCC 43734]
Length = 209
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 96/157 (61%), Gaps = 5/157 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA---WKKKFHAEISEGQLDGLRTIL 58
+++ GLGNPG +Y RHN+G M I + A KK + +I+E ++ G + +L
Sbjct: 31 WLIIGLGNPGDKYANTRHNVGRMVIGELLDRQVPAASLSTHKKTNTDIAEVKIAGRKVVL 90
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+P+TFMN+SG + ++ F+K+P EN +V +DDL+ D G ++L+ GGD GHNGLKSI
Sbjct: 91 AQPRTFMNVSGGPVQQLAAFFKIP-AENIIVAYDDLEGDPGAVKLRQSGGDKGHNGLKSI 149
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
++ G K+Y RL GIGRPP +VL F E
Sbjct: 150 TKSLGTKDYWRLSCGIGRPPGRMDPAAYVLKPFPKSE 186
>gi|314937291|ref|ZP_07844633.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis subsp. hominis
C80]
gi|313654587|gb|EFS18337.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis subsp. hominis
C80]
Length = 190
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 113/187 (60%), Gaps = 5/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF ID I + F K+KF + +L+G + + I+
Sbjct: 1 MKCIVGLGNIGKRFERTRHNIGFEVIDYILDKNQFTLDKQKFKGAYTIERLNGDKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + +E+ +V++DD+DL G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVGPLMDYYNVE-VEDLIVLYDDMDLSQGNIRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + +KR+RIG+GRP + + +VL FS+ E + +I++ A+++ + S
Sbjct: 120 HLGTDQFKRIRIGVGRPTNGMSVPDYVLQKFSNEEMMTMEKVIEHAAQAVEAFI---ETS 176
Query: 180 FLNHIVS 186
+H+++
Sbjct: 177 RFDHVMN 183
>gi|303324919|pdb|3KJZ|A Chain A, Crystal Structure Of Native Peptidyl-Trna Hydrolase From
Mycobacterium Smegmatis
gi|311772055|pdb|3KK0|A Chain A, Crystal Structure Of Partially Folded Intermediate State
Of Peptidyl- Trna Hydrolase From Mycobacterium Smegmatis
gi|312208144|pdb|3P2J|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Smegmatis At 2.2 A Resolution
Length = 191
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 108/174 (62%), Gaps = 5/174 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILI 59
+V GLGNPG Y + RHN+GFM D + + A+K KK AE+ G+L G +L
Sbjct: 5 LLVVGLGNPGPTYAKTRHNLGFMVAD-VLAGRIGSAFKVHKKSGAEVVTGRLAGTTVVLA 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+ MN SG+ + + FY +P + +VIHD+LD+DFG +RLK GGG+ GHNGL+S++
Sbjct: 64 KPRISMNESGRQVGPLAKFYSVPP-QQIVVIHDELDIDFGRIRLKLGGGEGGHNGLRSVA 122
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G KN+ R+RIG+GRPP VL NF+S ER + I++ A + LL
Sbjct: 123 SALGTKNFHRVRIGVGRPPGRKDPAAFVLENFTSAERAEVPTIVEQAADATELL 176
>gi|169825683|ref|YP_001695841.1| peptidyl-tRNA hydrolase [Lysinibacillus sphaericus C3-41]
gi|168990171|gb|ACA37711.1| Peptidyl-tRNA hydrolase [Lysinibacillus sphaericus C3-41]
Length = 203
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 106/184 (57%), Gaps = 2/184 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+ GLGNPG Y RHNIGF ID + P KF+ + + +L+K
Sbjct: 18 MKIIVGLGNPGKPYEHTRHNIGFDVIDALAEKWGTPLTNSKFNGMYTTVHRPEGKVLLVK 77
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M+++ + ++E+ +VI+DDLDL+ G LRL+ G GHNG+KS+ +
Sbjct: 78 PLTYMNLSGECVGPLMDYFDI-DVEDLIVIYDDLDLETGKLRLRQKGSAGGHNGIKSLIQ 136
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GI RPP + +VLG FS ++ + I+ ++ + + +
Sbjct: 137 HLGTQEFNRIRVGISRPPAGMKVADYVLGKFSKEDQVSMNEAIEKSVNAVEVSLSKPFLD 196
Query: 180 FLNH 183
+NH
Sbjct: 197 VMNH 200
>gi|323342262|ref|ZP_08082494.1| aminoacyl-tRNA hydrolase [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463374|gb|EFY08568.1| aminoacyl-tRNA hydrolase [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 186
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 89/143 (62%), Gaps = 2/143 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN GF+ ID + S KF A I+E + + +L+K
Sbjct: 5 MKVIVGLGNPGKQYENTRHNAGFLVIDEVASKLGVSISTNKFKALIAETFVGTEKVVLVK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ EVM +Y + +LE+ LVI DD+D+ G+LRL+ G G G+KSI +
Sbjct: 65 PQTFMNLSGESVGEVMRYYDV-DLEDLLVISDDMDITVGSLRLREKGSSGGQKGVKSIID 123
Query: 121 KCGKN-YKRLRIGIGRPPDTAHI 142
G N + RL++GIG+ +
Sbjct: 124 HLGSNEFLRLKVGIGKSTQIKTV 146
>gi|218462408|ref|ZP_03502499.1| peptidyl-tRNA hydrolase [Rhizobium etli Kim 5]
Length = 101
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH H F W KKF EI+EG+L G + +LIK
Sbjct: 1 MLIIAGLGNPGAKYAGNRHNIGFMAVDAIHRRHSFSPWSKKFRGEIAEGELAGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLR 102
PQT+MNLSG+++ E M FYKL + + I+D+LDL G R
Sbjct: 61 PQTYMNLSGEAVGEAMRFYKL-QPADLVAIYDELDLPAGKAR 101
>gi|225568649|ref|ZP_03777674.1| hypothetical protein CLOHYLEM_04727 [Clostridium hylemonae DSM
15053]
gi|225162577|gb|EEG75196.1| hypothetical protein CLOHYLEM_04727 [Clostridium hylemonae DSM
15053]
Length = 194
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 94/152 (61%), Gaps = 1/152 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNP +Y RHN+GF ID + + +K A I +G + G + +L K
Sbjct: 1 MFIIAGLGNPTLQYEGTRHNVGFDVIDTVARKYNISVDYRKNRAYIGKGIIAGQKVLLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ ++++YK+ LVI+DD+ L G LR++ G GHNG+KSI
Sbjct: 61 PQTYMNLSGESIRGLVDYYKVDEESQLLVIYDDVSLGAGQLRIRKKGSAGGHNGIKSIIS 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFS 151
G + + R+++G+G P + +VLG+FS
Sbjct: 121 CLGTDIFPRIKVGVGEKPKRYDLADYVLGHFS 152
>gi|224118918|ref|XP_002317938.1| predicted protein [Populus trichocarpa]
gi|222858611|gb|EEE96158.1| predicted protein [Populus trichocarpa]
Length = 271
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 105/193 (54%), Gaps = 6/193 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D + F A +G + + + KP
Sbjct: 78 WLIVGLGNPGKKYHSTRHNVGFQMVDALADAEGISISGVSFKALFGKGFIGNVPVMFAKP 137
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFMN SG+S+ ++++YK+P L+ L+I+DDLDL F LRL GG GHNG+KS+
Sbjct: 138 QTFMNASGESVGAIVSYYKIP-LKQVLLIYDDLDLPFAKLRLLPKGGHGGHNGMKSVINH 196
Query: 121 -KCGKNYKRLRIGIGRPP---DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
K +++ RLRIGIGRPP DTA+ + E F+ R L L +
Sbjct: 197 FKGNRDFPRLRIGIGRPPGKMDTANFVLRPFTKQEHEELDFMFQQGIEAVRILLLEGLNK 256
Query: 177 DVSFLNHIVSVRK 189
+F+N S+ +
Sbjct: 257 SATFVNSTKSMEQ 269
>gi|229816292|ref|ZP_04446601.1| hypothetical protein COLINT_03344 [Collinsella intestinalis DSM
13280]
gi|229808143|gb|EEP43936.1| hypothetical protein COLINT_03344 [Collinsella intestinalis DSM
13280]
Length = 209
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 92/160 (57%), Gaps = 9/160 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEIS-------EGQLDGLR 55
+VAGLGNPG EY RHN GF ID + WK + AE++ E +
Sbjct: 11 MVAGLGNPGEEYAATRHNAGFCAIDVLAEKAGVSYWKNQAGAEVAVINVNDAEAEGGKRE 70
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L+KPQ++MN SG + ++ YK+ E LVIHD+LD+ G +R+K GGG AGHNGL
Sbjct: 71 VVLVKPQSYMNTSGGPISKLCAQYKV-KPEELLVIHDELDIPAGDVRVKVGGGHAGHNGL 129
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+SI +K G +++ R+R GIG PP + VL S E
Sbjct: 130 RSIIDKLGSRDFSRIRAGIGNPPGRMPVADFVLKQLRSRE 169
>gi|33864102|ref|NP_895662.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9313]
gi|46576737|sp|Q7V4V4|PTH_PROMM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|33635686|emb|CAE22010.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9313]
Length = 206
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 12/179 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG +Y RHNIGFM +D++ S F P + KFH ++E + R L+
Sbjct: 8 LLVGLGNPGSKYVGTRHNIGFMALDKLAAQKSVSFRP--QTKFHGLMAEVAVGSERVRLL 65
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
PQT+MN SG+++ ++++ L ++ LV+ DD+DL G LRL+ G GHNGL+S
Sbjct: 66 MPQTYMNESGRAIRAAIDWFGL-EVDQLLVLVDDMDLSLGRLRLRAQGSAGGHNGLRSAI 124
Query: 120 EKCG-KNYKRLRIGIGRPPDT-----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ G +++ RLRIGIG P T A + HVLG FS E + ++D + L L+
Sbjct: 125 QHLGTQDFCRLRIGIGAPGCTSEERRARTVSHVLGVFSRQESLLVDQVLDEVLMGLDLI 183
>gi|91787187|ref|YP_548139.1| peptidyl-tRNA hydrolase [Polaromonas sp. JS666]
gi|119390976|sp|Q12E01|PTH_POLSJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|91696412|gb|ABE43241.1| peptidyl-tRNA hydrolase [Polaromonas sp. JS666]
Length = 204
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 101/182 (55%), Gaps = 5/182 (2%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKPQTF 64
GLGNPG EY RHN GF ID + P K +H +++ L+G L+KP TF
Sbjct: 7 GLGNPGAEYEATRHNAGFWWIDALSRELQAPLTLDKSYHGQVARTTLNGKTVWLLKPLTF 66
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK 124
MN+SG+S+ + F+K+ + LV HD+LD+ G ++LK GG AGHNGL+ I + G
Sbjct: 67 MNVSGKSVAALARFFKIAP-DEVLVAHDELDIVPGQVKLKFGGSHAGHNGLRDIHAQLGT 125
Query: 125 -NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP--LLAKREDVSFL 181
+Y RLRIG+G P A +I VL S R + ID +++P L + E + L
Sbjct: 126 DDYWRLRIGVGHPGVKAEVINWVLKKPSQEHRVAIEECIDRALKAVPALLAGEMEKATML 185
Query: 182 NH 183
H
Sbjct: 186 IH 187
>gi|269125254|ref|YP_003298624.1| peptidyl-tRNA hydrolase [Thermomonospora curvata DSM 43183]
gi|268310212|gb|ACY96586.1| peptidyl-tRNA hydrolase [Thermomonospora curvata DSM 43183]
Length = 206
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 101/156 (64%), Gaps = 2/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+++V GLGNPG +Y NRHN GFM +D + K AE+ EG+L G R +L K
Sbjct: 17 LWLVVGLGNPGPDYAGNRHNAGFMVVDVLAGRMGGRFKAHKARAEVLEGRLAGRRVVLAK 76
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMN SG + + +F+K+P LE +++HD+LD+ +G +RLK GGG GHNGL+SIS+
Sbjct: 77 PRSFMNDSGGPVARLRDFFKVP-LERIVIVHDELDIPYGAVRLKQGGGAGGHNGLRSISK 135
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G +Y R+R G+GRPP VL +FS+ ER
Sbjct: 136 SLGAPDYLRVRFGVGRPPGRMDAAAFVLRDFSAAER 171
>gi|291296895|ref|YP_003508293.1| peptidyl-tRNA hydrolase [Meiothermus ruber DSM 1279]
gi|290471854|gb|ADD29273.1| peptidyl-tRNA hydrolase [Meiothermus ruber DSM 1279]
Length = 192
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 108/180 (60%), Gaps = 16/180 (8%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG-----LR 55
MF++ G GNPG +Y +HN+GF +DR+ S F P K HA ++E +L G +
Sbjct: 1 MFLIVGQGNPGLQYARTKHNVGFWVLDRLGS-DFRP----KGHALVTEIKLQGPSGEWVS 55
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L+KP TF N +G+++ + +Y++P E LV+HD+LDL G LR K GG +AG+ GL
Sbjct: 56 GLLVKPTTFYNATGEAVAPLARYYRVPP-ERILVVHDELDLPPGRLRFKAGGSNAGNYGL 114
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+SI+ G +++ RLRIGIG+PP VL F PE ++PI+D + + AK
Sbjct: 115 ESITAHLGTRDFHRLRIGIGKPPSPEAGAGWVLSGF-HPE---VVPIMDKVISTAAEAAK 170
>gi|307244017|ref|ZP_07526136.1| aminoacyl-tRNA hydrolase [Peptostreptococcus stomatis DSM 17678]
gi|306492541|gb|EFM64575.1| aminoacyl-tRNA hydrolase [Peptostreptococcus stomatis DSM 17678]
Length = 186
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNPG +Y RHN GF +D + + K K A I EG++ + +L+K
Sbjct: 1 MYIIVGLGNPGKKYEHTRHNAGFDALDILAEEYGIKIDKIKHKALIGEGRIGSEKVVLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ V FYK+ ++++ +V++DD+DLD G LR++ G HNG+KSI +
Sbjct: 61 PQTYMNLSGESVQSVFQFYKV-DMDHLIVVYDDIDLDIGKLRIRKKGSAGSHNGMKSIIK 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + + R+R+G+ RP + VL S +
Sbjct: 120 CLGSQEFPRVRVGVSRPDPNRDLADFVLSRVSKDQ 154
>gi|257877902|ref|ZP_05657555.1| peptidyl-tRNA hydrolase [Enterococcus casseliflavus EC20]
gi|257812068|gb|EEV40888.1| peptidyl-tRNA hydrolase [Enterococcus casseliflavus EC20]
Length = 186
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 100/169 (59%), Gaps = 2/169 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN+GFM +D + + K F AE++E L G + +L+K
Sbjct: 1 MKMIVGLGNPGKKYEKTKHNVGFMVVDALAQKYQATFKKSAFEAEVAEFFLKGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
PQTFMN SG+++ +M ++ + E +V++DDLDL G +RL+ G GHNG+KS I+
Sbjct: 61 PQTFMNESGRAVGPLMTYFGIYQ-EELVVVYDDLDLALGKIRLRQKGSAGGHNGIKSLIA 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
+ R++IGI RP ++ HVL F+ + +L ID +
Sbjct: 120 HLDSTVFDRIKIGIDRPRPGQTVVNHVLSPFAKDDLPIVLQSIDKAVEA 168
>gi|320335350|ref|YP_004172061.1| peptidyl-tRNA hydrolase [Deinococcus maricopensis DSM 21211]
gi|319756639|gb|ADV68396.1| Peptidyl-tRNA hydrolase [Deinococcus maricopensis DSM 21211]
Length = 203
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 97/168 (57%), Gaps = 7/168 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHN+G++ +D + + W+K AE++E +L + +L+K
Sbjct: 1 MRVVVGLGNPGAQYALTRHNVGWLVVDEV-ARRAGATWRKDRDAEVTEVRLGTEKVLLVK 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M FYKL + LV+ DDLD FG ++ + GG G NG++ I
Sbjct: 60 PQTFMNSSGRAVAPLMTFYKLDG-AHLLVVQDDLDSPFGLMKFRLGGRHGGQNGVRDIIT 118
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
+ G + + RL++GI RPP VL + ER +D + R
Sbjct: 119 RLGTDAFPRLKLGISRPPTGWDPAGWVLSKWRDEERT----TVDELVR 162
>gi|70727508|ref|YP_254424.1| peptidyl-tRNA hydrolase [Staphylococcus haemolyticus JCSC1435]
gi|119391015|sp|Q4L3F9|PTH_STAHJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68448234|dbj|BAE05818.1| peptidyl-tRNA hydrolase [Staphylococcus haemolyticus JCSC1435]
Length = 190
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 104/170 (61%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF ID I H F K+KF + +L+G + + I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVIDYILKKHNFSLDKQKFKGAYTIERLNGDKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + +E+ +V++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVGPLMDYYNVE-VEDLIVLYDDLDLSQGQIRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR+RIG+GRP + + +VL FS E + +I++ A ++
Sbjct: 120 HLGTDQFKRIRIGVGRPTNGMSVPDYVLQKFSKEEMITMDKVIEHSAHAV 169
>gi|91204544|emb|CAJ70772.1| similar to peptidyl-tRNA hydrolase [Candidatus Kuenenia
stuttgartiensis]
Length = 186
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 103/186 (55%), Gaps = 7/186 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GFM ID + KF + + +++ IL+K
Sbjct: 3 MKMIVGLGNPGEKYLRTRHNLGFMVIDEFSQQLEMGGVQHKFQSLFCKKEVEHEEIILLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG ++ EV N YK + +V+ DDLDL G LR++ GG GH GL+S++
Sbjct: 63 PQTFMNLSGIAVQEVANMYKC-QPRDVMVVCDDLDLPLGKLRIRRSGGCGGHRGLESVAS 121
Query: 121 KCG-KNYKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G ++ RLRIGIGRP DT+ R VL FS+ E + + ++L +
Sbjct: 122 SLGTADFPRLRIGIGRPKFNDTS---RFVLSMFSAEEDVEIAKSLQEACKALKTWVYKGI 178
Query: 178 VSFLNH 183
S +N
Sbjct: 179 ESCMNE 184
>gi|197120547|ref|YP_002132498.1| peptidyl-tRNA hydrolase [Anaeromyxobacter sp. K]
gi|238689897|sp|B4ULC2|PTH_ANASK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|196170396|gb|ACG71369.1| Aminoacyl-tRNA hydrolase [Anaeromyxobacter sp. K]
Length = 192
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 99/155 (63%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY RHN+GF+ DR+ KKF AE++E +L R ++K
Sbjct: 1 MKLVVGLGNPGEEYARTRHNVGFVVADRLAQLAGASFSAKKFAAELAEARLGPERVWIMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ + F+KL L++ +V+HDDL+LD ++LK GGG GHNG+KS++
Sbjct: 61 PQTYMNHSGEAVGAALRFWKL-GLDDLVVVHDDLELDPYRVQLKVGGGHGGHNGVKSVNA 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G Y R+R+G+GRPP +VLG F+ E
Sbjct: 120 HVGSPEYARVRVGVGRPPPRMDPADYVLGKFAKGE 154
>gi|77164044|ref|YP_342569.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani ATCC 19707]
gi|254435162|ref|ZP_05048669.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani AFC27]
gi|119390970|sp|Q3JDQ7|PTH_NITOC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|76882358|gb|ABA57039.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani ATCC 19707]
gi|207088273|gb|EDZ65545.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani AFC27]
Length = 193
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 99/173 (57%), Gaps = 7/173 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTIL 58
+++ GLGNPG EY + RHN GF +D S +F P KF + + G L
Sbjct: 6 WLLIGLGNPGTEYAQTRHNAGFWWLDAFASELGINFKPG--AKFFGDYARANWRGHDLWL 63
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP TFMN SGQ++L ++N+Y++P LE+ L+ HDDLDL G +LK GG GHNGL+ I
Sbjct: 64 LKPATFMNRSGQAVLALLNYYQIP-LEHLLIAHDDLDLPPGVAKLKRAGGHGGHNGLRDI 122
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ G +++ RLR+G+G P ++ +VL S +R + I LP
Sbjct: 123 INRLGRRDFLRLRLGVGHPGSGQDVVSYVLNRPSREDRQAIEAAIGAGLEVLP 175
>gi|291514752|emb|CBK63962.1| peptidyl-tRNA hydrolase [Alistipes shahii WAL 8301]
Length = 187
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 96/158 (60%), Gaps = 3/158 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGF +D + + + + +++E + G +L+KP
Sbjct: 3 YLIVGLGNIGAEYAETRHNIGFNVLDALAEASN-TVFTTQRYGDVAEAKYKGRTLVLLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M+ K+P EN LV+ DD+ L FGTLRL+ G GHNGLK+ISE
Sbjct: 62 STYMNLSGKAVRYWMDAGKIPP-ENLLVVSDDIALPFGTLRLRPKGSAGGHNGLKNISEL 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G + Y R+R G+G H + +VLG ++ ER L
Sbjct: 121 LGTEEYARMRFGVGGDFPKGHQVEYVLGEWTDEERKAL 158
>gi|226531744|ref|NP_001148279.1| peptidyl-tRNA hydrolase [Zea mays]
gi|194697668|gb|ACF82918.1| unknown [Zea mays]
gi|195617118|gb|ACG30389.1| peptidyl-tRNA hydrolase [Zea mays]
Length = 247
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 3/159 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN+GF ID I +F A + +G++ +L KP
Sbjct: 53 WLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDASIMLAKP 112
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFMN SG+S+ ++++++K+P L +V++DDLDL F LRL GG GHNG++SI
Sbjct: 113 QTFMNASGESVGQLVSYFKIP-LSQVVVMYDDLDLPFAKLRLLPKGGHGGHNGMRSIVNH 171
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
K +++ RLRIGIGRPP VL F+ E+ L
Sbjct: 172 LKQSRDFPRLRIGIGRPPGKMDPANFVLRPFNKKEQQEL 210
>gi|220915258|ref|YP_002490562.1| Aminoacyl-tRNA hydrolase [Anaeromyxobacter dehalogenans 2CP-1]
gi|254783847|sp|B8J804|PTH_ANAD2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219953112|gb|ACL63496.1| Aminoacyl-tRNA hydrolase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 192
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 99/155 (63%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY RHN+GF+ DR+ KKF AE++E +L R ++K
Sbjct: 1 MKLVVGLGNPGEEYARTRHNVGFVVADRLAQLAGASFSAKKFAAELAEARLGPERVWIMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ + F+KL L++ +V+HDDL+LD ++LK GGG GHNG+KS++
Sbjct: 61 PQTYMNHSGEAVGAALRFWKL-GLDDLVVVHDDLELDPYRVQLKVGGGHGGHNGVKSVNA 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G Y R+R+G+GRPP +VLG F+ E
Sbjct: 120 HVGSPEYARVRVGVGRPPPRMDPADYVLGKFAKGE 154
>gi|257455799|ref|ZP_05621025.1| peptidyl-tRNA hydrolase [Enhydrobacter aerosaccus SK60]
gi|257446813|gb|EEV21830.1| peptidyl-tRNA hydrolase [Enhydrobacter aerosaccus SK60]
Length = 195
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN GF ++R+ +F+ KKFH + G + G+ L+ P
Sbjct: 6 LIVGLGNPGQQYAQTRHNAGFWFVERMSETFNITMTLDKKFHGLVGRGVVYGMDIRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG++++ ++NFY + N + L++HD+LDLD G +RLKTGGG GHNGL+ I
Sbjct: 66 HTFMNKSGEAVVPMVNFYGIHN-DELLIVHDELDLDVGRMRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
G ++ RLR+GIG P + + +VLG ++ E+ ++D R+LP L
Sbjct: 125 IGADFHRLRLGIGHPGHKSKVSGYVLGKPTADEQIAFNSMLDAAMRTLPDLV 176
>gi|198277114|ref|ZP_03209645.1| hypothetical protein BACPLE_03322 [Bacteroides plebeius DSM 17135]
gi|198269612|gb|EDY93882.1| hypothetical protein BACPLE_03322 [Bacteroides plebeius DSM 17135]
Length = 187
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 102/179 (56%), Gaps = 16/179 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH--SFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+++ GLGN G EY E RHNIGFM +D + S F + A++S L G + IL+
Sbjct: 3 YLIVGLGNIGEEYRETRHNIGFMVLDALAKASNIVFSDGRYGATAQLS---LKGRQLILL 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG ++ M K+P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 60 KPSTYMNLSGNAVRYWMQQEKIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIA 118
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSS------PERYFLLPIIDNIARSLPL 171
G +NY RLR GIG I VLG+F PER L + I +S L
Sbjct: 119 ATLGTQNYARLRFGIGNDFPKGGQIDFVLGHFDEESMKLMPER---LEVAQEIIKSFCL 174
>gi|29349996|ref|NP_813499.1| peptidyl-tRNA hydrolase [Bacteroides thetaiotaomicron VPI-5482]
gi|253572759|ref|ZP_04850159.1| peptidyl-tRNA hydrolase [Bacteroides sp. 1_1_6]
gi|46576804|sp|Q89YZ2|PTH_BACTN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|29341907|gb|AAO79693.1| peptidyl-tRNA hydrolase [Bacteroides thetaiotaomicron VPI-5482]
gi|251837659|gb|EES65750.1| peptidyl-tRNA hydrolase [Bacteroides sp. 1_1_6]
Length = 189
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 94/155 (60%), Gaps = 2/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 4 YLIVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFIDGRYGFTTSFSIKGRQLILLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 64 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAI 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G +NY RLR GIG I +VLG+F+ +R
Sbjct: 123 LGTQNYARLRFGIGNDFPKGGQIDYVLGHFTDEDR 157
>gi|312865734|ref|ZP_07725956.1| aminoacyl-tRNA hydrolase [Streptococcus downei F0415]
gi|311098609|gb|EFQ56831.1| aminoacyl-tRNA hydrolase [Streptococcus downei F0415]
Length = 189
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 99/169 (58%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HNIGFM ID I + K F A + L+G + +KP
Sbjct: 4 LIVGLGNPGVKYDKTKHNIGFMTIDEITKNLDVTFTEDKNFKALVGSTFLNGEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS+ ++ ++ + E+ LVI+DDLD+ G +R + G GHNG+KSI +
Sbjct: 64 LTFMNESGQSVQALLTYFNIAT-EDLLVIYDDLDMAVGKIRFRQKGSAGGHNGIKSIIKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R+++GIGRP ++ HVL F + +L ++ +A ++
Sbjct: 123 IGNQEFDRIKVGIGRPKPGTTVVHHVLSTFGQDDYTTILASLERVAAAV 171
>gi|260171342|ref|ZP_05757754.1| peptidyl-tRNA hydrolase [Bacteroides sp. D2]
Length = 219
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 34 YLVVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFMDGRYGFTTSFSIKGRQLILLKP 93
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 94 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 152
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +NY RLR GIG I +VLG+F+ +
Sbjct: 153 LGTQNYARLRFGIGSDFPRGGQIDYVLGHFTDED 186
>gi|256384077|gb|ACU78647.1| aminoacyl-tRNA hydrolase [Mycoplasma mycoides subsp. capri str.
GM12]
gi|256384909|gb|ACU79478.1| aminoacyl-tRNA hydrolase [Mycoplasma mycoides subsp. capri str.
GM12]
gi|296455255|gb|ADH21490.1| aminoacyl-tRNA hydrolase [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 186
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY + RHN GF+ ID + + + + K++F++ I ++ + +L+K
Sbjct: 1 MKVIIGLGNIGKEYEKTRHNAGFIAIDLLLEKYNYSSVKQEFNSLIYTTMINNQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +++NFYK+ +L + ++IHDD DL+ ++ K G AGHNG+KSI
Sbjct: 61 PLTFMNNSGIAVRQIINFYKI-DLNDLIIIHDDKDLNISRIQFKKDGSSAGHNGIKSIIN 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+N+ RLRIG+ + P I+ VL FS E
Sbjct: 120 NLQTQNFYRLRIGVNQVPKEWKIVDWVLSKFSDEE 154
>gi|256826844|ref|YP_003150803.1| peptidyl-tRNA hydrolase [Cryptobacterium curtum DSM 15641]
gi|256582987|gb|ACU94121.1| peptidyl-tRNA hydrolase [Cryptobacterium curtum DSM 15641]
Length = 185
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 91/148 (61%), Gaps = 2/148 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG EY RHN GF ID + WK + A + G L +L K
Sbjct: 1 MYLIVGLGNPGEEYEHTRHNAGFDTIDILADEAGARYWKNECGALSARGVLANEEVVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ++MN SG + ++ N Y + +N +VIHDDLD+ G +R+K GGG AGHNGL+SI +
Sbjct: 61 PQSYMNTSGGPVKQLCNTYGIAP-DNLIVIHDDLDIAPGRIRVKFGGGHAGHNGLRSICD 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVL 147
K G +++ R+R GIGRPP + +VL
Sbjct: 120 KLGTRDWFRVRCGIGRPPGRMSVSDYVL 147
>gi|255692809|ref|ZP_05416484.1| aminoacyl-tRNA hydrolase [Bacteroides finegoldii DSM 17565]
gi|260621438|gb|EEX44309.1| aminoacyl-tRNA hydrolase [Bacteroides finegoldii DSM 17565]
Length = 189
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM +D + + P + + + + G + IL+KP
Sbjct: 4 YLIVGLGNIGPEYHETRHNIGFMTVDSLAKTNSAPPFIDGRYGFTTNFTIKGRQLILLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 64 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +NY RLR GIG I +VLG+F+ +
Sbjct: 123 LGTQNYARLRFGIGNDFPRGGQIDYVLGHFTDED 156
>gi|116628944|ref|YP_814116.1| peptidyl-tRNA hydrolase [Lactobacillus gasseri ATCC 33323]
gi|238853543|ref|ZP_04643915.1| aminoacyl-tRNA hydrolase [Lactobacillus gasseri 202-4]
gi|282852619|ref|ZP_06261961.1| aminoacyl-tRNA hydrolase [Lactobacillus gasseri 224-1]
gi|311111247|ref|ZP_07712644.1| aminoacyl-tRNA hydrolase [Lactobacillus gasseri MV-22]
gi|122274058|sp|Q046E4|PTH_LACGA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116094526|gb|ABJ59678.1| peptidyl-tRNA hydrolase [Lactobacillus gasseri ATCC 33323]
gi|238833839|gb|EEQ26104.1| aminoacyl-tRNA hydrolase [Lactobacillus gasseri 202-4]
gi|282556361|gb|EFB61981.1| aminoacyl-tRNA hydrolase [Lactobacillus gasseri 224-1]
gi|311066401|gb|EFQ46741.1| aminoacyl-tRNA hydrolase [Lactobacillus gasseri MV-22]
Length = 185
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 98/159 (61%), Gaps = 3/159 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y + +HN GFM +D S + K KF ++ +++G I ++
Sbjct: 1 MKLIAGLGNPGKKYDQTKHNTGFMALDHYLSKNNLDLDKDKFEGLWTKQKVNGEDVIFLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +V NF+K+ E+ LVIHDD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNDSGKSIAQVANFFKIA-PEDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G N+ RL+IGI R P ++ VL F+ ++ +
Sbjct: 120 CLGTNNFNRLKIGI-RHPQKESVVSWVLSPFNDEQQKLM 157
>gi|113476455|ref|YP_722516.1| peptidyl-tRNA hydrolase [Trichodesmium erythraeum IMS101]
gi|119391035|sp|Q110N1|PTH_TRIEI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110167503|gb|ABG52043.1| peptidyl-tRNA hydrolase [Trichodesmium erythraeum IMS101]
Length = 219
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 105/182 (57%), Gaps = 10/182 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTI-LIK 60
++ GLGNP +Y + RHNIGF ID I + + + +KF E EG+ I L+K
Sbjct: 15 LIVGLGNPEPKYDQTRHNIGFTGIDTIANIWQVSLSENRKFKGEFGEGRRPKAEKIYLLK 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ V+N+YKLP L+I+DD+DL G LRL+ G GHNG+KS
Sbjct: 75 PLTYMNRSGEAISAVVNWYKLPP-SCVLIIYDDMDLPMGRLRLRLSGSAGGHNGMKSAIA 133
Query: 121 KCG-KNYKRLRIGIGRPPD------TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
G + + RLRIGIG+P + A I HVLG FS E + +++ + ++ L
Sbjct: 134 HLGTQEFPRLRIGIGKPKNITAERGEAKTISHVLGKFSPKENKLMTQVLELVVDAVELSL 193
Query: 174 KR 175
K+
Sbjct: 194 KQ 195
>gi|288942089|ref|YP_003444329.1| peptidyl-tRNA hydrolase [Allochromatium vinosum DSM 180]
gi|288897461|gb|ADC63297.1| peptidyl-tRNA hydrolase [Allochromatium vinosum DSM 180]
Length = 194
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 106/192 (55%), Gaps = 11/192 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLRTI 57
++ GLGNPG +Y RHN+GF ++ I SF P KF E++ ++ G
Sbjct: 8 LIVGLGNPGAQYEATRHNVGFWWVEAIARAQGESFRAEP----KFLGELARVRIAGQDVR 63
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK- 116
L+KP T+MN SGQS++ V ++ +P E L+ HD+LDL G R+K GGG AGHNGL+
Sbjct: 64 LLKPSTYMNRSGQSVVAVARYFDIPP-ERILIAHDELDLPVGVARIKQGGGHAGHNGLRD 122
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
SIS + + RLRIGI P D + +VLG S + + +D+ R L L + +
Sbjct: 123 SISALGSREFWRLRIGIAHPGDRTLVTGYVLGRPSRDDESRIRESLDDADRRLAELVEGQ 182
Query: 177 DVSFLNHIVSVR 188
+N + S R
Sbjct: 183 FQLAMNRLHSQR 194
>gi|260890956|ref|ZP_05902219.1| aminoacyl-tRNA hydrolase [Leptotrichia hofstadii F0254]
gi|260859509|gb|EEX74009.1| aminoacyl-tRNA hydrolase [Leptotrichia hofstadii F0254]
Length = 188
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 89/155 (57%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF+ +D + ++KF + + G + K
Sbjct: 1 MKLIVGLGNPGEQYKLTRHNIGFIFVDEYLKENNITDIREKFKSLFVQTNHKGDKVFYQK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ E + F+KL + VI+DD+D+ FG L++K G GHNG+KSI
Sbjct: 61 PMTFMNLSGEAVGEAVRFFKLDPETDLFVIYDDMDMPFGKLKIKQNGSAGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + R++ GIG+P + VLG FS E+
Sbjct: 121 HVGNEFARIKFGIGKPETKEETLGFVLGKFSPEEK 155
>gi|15605860|ref|NP_213237.1| peptidyl-tRNA hydrolase [Aquifex aeolicus VF5]
gi|6647697|sp|O66677|PTH_AQUAE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|2983032|gb|AAC06642.1| peptidyl-tRNA hydrolase [Aquifex aeolicus VF5]
Length = 192
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 98/168 (58%), Gaps = 2/168 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+V GLGNPG EY + RHN+GFM ID + ++ + + + ++ G IL KP
Sbjct: 5 LVVGLGNPGKEYEKTRHNVGFMVIDELVKALRAKGPFEEALSHVYKARIGGKEVILAKPM 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG ++ ++ YKL + E +V++DDLDL G +RL+ G GH G++SI +
Sbjct: 65 TYMNNSGAAVYNLLEEYKL-SPEQMIVVYDDLDLPLGHMRLRLKGSSGGHRGVESIIKYI 123
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +N+ RLRIGIGRP ++++VL FS E + +I R L
Sbjct: 124 GTQNFPRLRIGIGRPKKKEDVVKYVLSPFSPEEEKVISQVIKKAVRCL 171
>gi|315168149|gb|EFU12166.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1341]
Length = 188
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y E +HNIGF+ +D I F A+I+E + + +L+K
Sbjct: 1 MKVIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++ ++ + ++E+ +VI+DDLDL+ G +RL+ G GHNG+KS+
Sbjct: 61 PLTFMNESGRSIGPLLTYFGV-DVEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNF 150
G N + R++IGIGRP +I HVL F
Sbjct: 120 HLGTNVFPRIKIGIGRPSKNDTVIHHVLSTF 150
>gi|228476232|ref|ZP_04060935.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis SK119]
gi|228269717|gb|EEK11216.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis SK119]
Length = 190
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 113/187 (60%), Gaps = 5/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF ID I + F K+KF + +L+G + + I+
Sbjct: 1 MKCIVGLGNIGKRFERTRHNIGFEVIDYILDKNQFTLDKQKFKGAYTIERLNGDKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + +E+ +V++DD+DL G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVGPLMDYYNVE-VEDLIVLYDDMDLSQGHIRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + +KR+RIG+GRP + + +VL FS+ E + +I++ A+++ + S
Sbjct: 120 HLGTDQFKRIRIGVGRPTNGMSVPDYVLQKFSNEEMMTMEKVIEHAAQAVEAFI---ETS 176
Query: 180 FLNHIVS 186
+H+++
Sbjct: 177 RFDHVMN 183
>gi|299148940|ref|ZP_07042002.1| aminoacyl-tRNA hydrolase [Bacteroides sp. 3_1_23]
gi|315919653|ref|ZP_07915893.1| peptidyl-tRNA hydrolase [Bacteroides sp. D2]
gi|298513701|gb|EFI37588.1| aminoacyl-tRNA hydrolase [Bacteroides sp. 3_1_23]
gi|313693528|gb|EFS30363.1| peptidyl-tRNA hydrolase [Bacteroides sp. D2]
Length = 189
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 4 YLVVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFMDGRYGFTTSFSIKGRQLILLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 64 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +NY RLR GIG I +VLG+F+ +
Sbjct: 123 LGTQNYARLRFGIGSDFPRGGQIDYVLGHFTDED 156
>gi|312138687|ref|YP_004006023.1| aminoacyl-tRNA hydrolase pth [Rhodococcus equi 103S]
gi|311888026|emb|CBH47338.1| aminoacyl-tRNA hydrolase Pth [Rhodococcus equi 103S]
Length = 192
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 112/173 (64%), Gaps = 5/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF--HFFPAWKKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y + RHNIGFM D + F A K+ AEI + +L G + IL K
Sbjct: 9 VVVGLGNPGPQYEKTRHNIGFMVADVLAGRVGGKFSAHKRS-GAEIVQTRLVGRQVILAK 67
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+++MNLSG ++ + F+ + EN +VIHD+LDLDFGT+RLK GGG+ GHNGL+SIS+
Sbjct: 68 PRSYMNLSGGAVSGLARFFSV-KPENIVVIHDELDLDFGTIRLKQGGGEGGHNGLRSISQ 126
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K+Y R R+GIGRPP +VL FS+ ER L + + A ++ L+
Sbjct: 127 SLGTKDYLRTRVGIGRPPGRQDPADYVLKPFSTVERKELDLVCEEAADAVELV 179
>gi|325676244|ref|ZP_08155923.1| aminoacyl-tRNA hydrolase [Rhodococcus equi ATCC 33707]
gi|325552805|gb|EGD22488.1| aminoacyl-tRNA hydrolase [Rhodococcus equi ATCC 33707]
Length = 192
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 112/173 (64%), Gaps = 5/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF--HFFPAWKKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y + RHNIGFM D + F A K+ AEI + +L G + IL K
Sbjct: 9 VVVGLGNPGPQYEKTRHNIGFMVADVLAGRVGGKFSAHKRS-GAEIVQTRLVGRQVILAK 67
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+++MNLSG ++ + F+ + EN +VIHD+LDLDFGT+RLK GGG+ GHNGL+SIS+
Sbjct: 68 PRSYMNLSGGAVSGLARFFSV-KPENIVVIHDELDLDFGTIRLKQGGGEGGHNGLRSISQ 126
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K+Y R R+GIGRPP +VL FS+ ER L + + A ++ L+
Sbjct: 127 SLGTKDYLRTRVGIGRPPGRQDPADYVLKPFSTVERKELDLVCEEAADAVELV 179
>gi|255536468|ref|YP_003096839.1| peptidyl-tRNA hydrolase [Flavobacteriaceae bacterium 3519-10]
gi|255342664|gb|ACU08777.1| Peptidyl-tRNA hydrolase [Flavobacteriaceae bacterium 3519-10]
Length = 187
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 99/168 (58%), Gaps = 3/168 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHN+GF ++I P +K ++EG+ G + ++KP
Sbjct: 3 YLIVGLGNKGDEYTETRHNVGFKVAEKIAETIEAP-FKPSNFGLMAEGKYKGRKVFILKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ + +P +EN +++ DDL L FGTLR+K G DAGHNGLKSI E+
Sbjct: 62 DTYMNLSGNAVKFWLQKENIP-VENLMIVTDDLSLPFGTLRMKMKGSDAGHNGLKSIQEQ 120
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
+NY RLR GI + +VLG +S E+ L I+ +++
Sbjct: 121 LQTQNYPRLRFGISAEFSEGKQVDYVLGKWSEDEKEKLPERIEKFSKA 168
>gi|121607938|ref|YP_995745.1| peptidyl-tRNA hydrolase [Verminephrobacter eiseniae EF01-2]
gi|121552578|gb|ABM56727.1| peptidyl-tRNA hydrolase [Verminephrobacter eiseniae EF01-2]
Length = 216
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 104/189 (55%), Gaps = 9/189 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+ AGLGNPG +Y RHN GF ID R P ++ A ++ + G L+
Sbjct: 18 LFAGLGNPGPDYAATRHNAGFWWIDALARELKTTLLP--ERSHQALLARTTVHGQSVWLL 75
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+PQTFMN SGQS+ + F+KL E LV+HD+LD+ G ++LK GGG AGHNGL+ I
Sbjct: 76 QPQTFMNHSGQSVASLARFFKL-QPEEILVVHDELDIAPGQVKLKRGGGHAGHNGLRDIH 134
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP--LLAKRE 176
+ G +Y RLRIGIG P + +I VL S +R + I + R+ P L+ + +
Sbjct: 135 GQLGSPDYWRLRIGIGHPGVRSEVINWVLKKPSPEQRALIEDSIAHSLRAWPALLVGEMD 194
Query: 177 DVSFLNHIV 185
S L H
Sbjct: 195 KASLLIHTT 203
>gi|183984443|ref|YP_001852734.1| peptidyl-tRNA hydrolase Pth [Mycobacterium marinum M]
gi|238689227|sp|B2HDJ5|PTH_MYCMM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|183177769|gb|ACC42879.1| peptidyl-tRNA hydrolase Pth [Mycobacterium marinum M]
Length = 191
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 108/176 (61%), Gaps = 5/176 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILI 59
+V GLGNPG Y RHN+GFM D + + +K K+ AE+ G+L +L
Sbjct: 5 LLVVGLGNPGENYARTRHNLGFMVADLLAA-RLGAKFKVHKRSGAEVVTGRLAQRSVVLA 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+ +MN SG+ + + FY +P + +VIHD+LDLDFG +RLK GGG+ GHNGL+S++
Sbjct: 64 KPRCYMNESGRQVAPLAKFYSVPP-ADLIVIHDELDLDFGRIRLKFGGGEGGHNGLRSVA 122
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K+++R+RIGIGRPP VL NFSSPER + I + A + LL +
Sbjct: 123 AALGTKDFQRVRIGIGRPPGRKDPATFVLENFSSPERPEVPTICEQAADATELLVE 178
>gi|118465371|ref|YP_880401.1| peptidyl-tRNA hydrolase [Mycobacterium avium 104]
gi|166227336|sp|A0QBW3|PTH_MYCA1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118166658|gb|ABK67555.1| peptidyl-tRNA hydrolase [Mycobacterium avium 104]
Length = 191
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 5/174 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF--HFFPAWKKKFHAEISEGQLDGLRTILI 59
+V GLGNPG Y RHN+GFM D + + F A K+ AEI G+L G ++
Sbjct: 5 LLVVGLGNPGDNYARTRHNVGFMVADLLAARMGSKFKAHKRS-GAEIVSGRLAGRSVVVA 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+ +MN SG+ + + FY +P + +VIHDDLDLDFG +RLK GGG+ GHNGL+S+S
Sbjct: 64 KPRCYMNESGRQVGPLAKFYSVPP-GDIIVIHDDLDLDFGRIRLKIGGGEGGHNGLRSVS 122
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K+++R+RIGIGRPP VL NF+S ER + I + A + LL
Sbjct: 123 NALGSKDFQRVRIGIGRPPGRKDPAAFVLENFTSTERADVPTICEQAADATELL 176
>gi|257057205|ref|YP_003135037.1| peptidyl-tRNA hydrolase [Saccharomonospora viridis DSM 43017]
gi|256587077|gb|ACU98210.1| peptidyl-tRNA hydrolase [Saccharomonospora viridis DSM 43017]
Length = 199
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 108/171 (63%), Gaps = 2/171 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++AGLGNPG Y NRHNIGF+ +D + K AEI EG+L G R +L+KP+
Sbjct: 15 LLAGLGNPGPRYEGNRHNIGFLVLDELADRVGGRFKAHKSGAEICEGRLAGRRVVLVKPR 74
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
+FMNLSG + F+K+ E +VIHD+LDL +GT+RLK GGG GHNGL+SIS+
Sbjct: 75 SFMNLSGGPVASAARFFKIAP-EGIVVIHDELDLPYGTVRLKFGGGTGGHNGLRSISKSL 133
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G ++Y R+R GI RPP + +VL +FS+ ER L ID A ++ L
Sbjct: 134 GTQDYYRVRFGIDRPPGRMNPADYVLRDFSTTERRELALNIDLCADAVETL 184
>gi|259501957|ref|ZP_05744859.1| aminoacyl-tRNA hydrolase [Lactobacillus antri DSM 16041]
gi|259170134|gb|EEW54629.1| aminoacyl-tRNA hydrolase [Lactobacillus antri DSM 16041]
Length = 208
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 109/183 (59%), Gaps = 4/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM +D++ + A+ K A + G ++G + +L+
Sbjct: 23 MKMIVGLGNIGSRYDETRHNTGFMVVDQLARDYQLGAFSHLKQEAVAASGVINGEKVMLV 82
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ ++++Y+L +L + ++++DDLD+ G +RLKT G GHNGLKSI
Sbjct: 83 KPTTFMNDSGRAVGPLVDYYQL-DLADLVIVNDDLDMPVGRVRLKTHGASGGHNGLKSII 141
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G KN+ R+++GI P ++ HVLG F+ ER ++ +L K ED
Sbjct: 142 NALGTKNFNRVKLGIDH-PQHGTVVSHVLGKFTPAERPQFDDAVEEAEHALEDWIKGEDF 200
Query: 179 SFL 181
+ L
Sbjct: 201 AQL 203
>gi|326501542|dbj|BAK02560.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 257
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 94/156 (60%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN+GF ID I K+F + + +G + + +L KP
Sbjct: 57 WLFVGLGNPGRMYKGTRHNVGFEMIDAIAEAEGISVSTKQFKSMVGKGLIGDVPVMLAKP 116
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFMN SG+S+ ++++++K+P L ++I+DDLDL F LRL GG GHNG++S+
Sbjct: 117 QTFMNASGESVGQLVSYFKIP-LNQVVLIYDDLDLPFAKLRLLPKGGHGGHNGVRSVIHH 175
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K +++ RLRIGIGRP I VL FS E+
Sbjct: 176 LKQSRDFPRLRIGIGRPTGMMGAIGFVLRAFSKEEQ 211
>gi|237749453|ref|ZP_04579933.1| peptidyl-tRNA hydrolase [Oxalobacter formigenes OXCC13]
gi|229380815|gb|EEO30906.1| peptidyl-tRNA hydrolase [Oxalobacter formigenes OXCC13]
Length = 195
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 108/176 (61%), Gaps = 7/176 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D + + W+K +F A +++ +++G L+K
Sbjct: 5 LIVGLGNPGPEYEQTRHNAGFWFVDNLENASQGGRWQKEARFSAFVAKTKINGNDVWLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SGQ++ + F+K+ E+ LV+HDDLD++ G +LK GG AGHNGLK I+
Sbjct: 65 PQTFMNRSGQAVGALARFFKIAP-EDILVVHDDLDINPGLAKLKRGGSSAGHNGLKDITS 123
Query: 121 KC-GKNYKRLRIGIGRPPDT---AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G++Y RLRIG+G P + + +I +VL ++ + I + + +PLL
Sbjct: 124 ALGGQDYWRLRIGVGHPRNQNLKSPVIDYVLQRPRHEDQNLINEAIGHGMQIIPLL 179
>gi|126658601|ref|ZP_01729747.1| peptidyl-tRNA hydrolase [Cyanothece sp. CCY0110]
gi|126620038|gb|EAZ90761.1| peptidyl-tRNA hydrolase [Cyanothece sp. CCY0110]
Length = 204
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 107/175 (61%), Gaps = 10/175 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEG-QLDGLRTILI 59
++ GLGNP +Y + RHNIGF +D + + +WK ++F I+EG + + L+
Sbjct: 14 LIVGLGNPEPKYDKTRHNIGFEMVDLLAE-SWGLSWKENRRFQGMIAEGNSRNNQKIYLL 72
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-I 118
KP T+MN SGQS+ V ++YKL + + LVI+DD+DL G +R++ G GHNG+KS I
Sbjct: 73 KPLTYMNRSGQSVRAVTDWYKLASTD-VLVIYDDMDLSIGRIRMRLSGSAGGHNGMKSII 131
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL---LP-IIDNIARSL 169
S G+++ RLRIGIG+ + + HVLG F+ ER + P ++D I SL
Sbjct: 132 SHLGGQDFPRLRIGIGKSNQLDNTVSHVLGRFAPEERTIINKTFPLVVDAIETSL 186
>gi|302763245|ref|XP_002965044.1| hypothetical protein SELMODRAFT_37138 [Selaginella moellendorffii]
gi|300167277|gb|EFJ33882.1| hypothetical protein SELMODRAFT_37138 [Selaginella moellendorffii]
Length = 177
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 95/156 (60%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG ++ RHN+GF ID + + A + +G ++G+ +L+KP
Sbjct: 1 WMIVGLGNPGSKFVGTRHNVGFEAIDLLALQENIKLNTIQCKALVGKGMIEGVPVLLVKP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QT+MNLSG ++ + +Y++ +N LVIHDD+DLD +++ GG GHNG+++I E
Sbjct: 61 QTYMNLSGDAVSPLALYYRV-KPDNILVIHDDMDLDVAAMKMVPKGGPGGHNGMRNIIER 119
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K KN RLRIGIGRPP +VL F+ E+
Sbjct: 120 FKDNKNIPRLRIGIGRPPGAMDPKAYVLQKFTQREK 155
>gi|268592702|ref|ZP_06126923.1| aminoacyl-tRNA hydrolase [Providencia rettgeri DSM 1131]
gi|291311844|gb|EFE52297.1| aminoacyl-tRNA hydrolase [Providencia rettgeri DSM 1131]
Length = 196
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H P + KF + ++G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQPLKEEAKFFGYTARINMNGNDIRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + NFY++ NL+ LV HD+LDL G ++K GG + GHNGLK I K
Sbjct: 66 TTFMNLSGKSVAAIANFYRI-NLDEILVAHDELDLPPGVAKMKLGGSNGGHNGLKDIQSK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
N+ RLRIGIG P D ++ VLG E+ + ID AR +L
Sbjct: 125 FANNPNFYRLRIGIGHPGDKNKVVGFVLGKPPLSEQKLIDDAIDEAARCTDIL 177
>gi|146329537|ref|YP_001208995.1| peptidyl-tRNA hydrolase [Dichelobacter nodosus VCS1703A]
gi|172047324|sp|A5EWU9|PTH_DICNV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146233007|gb|ABQ13985.1| peptidyl-tRNA hydrolase [Dichelobacter nodosus VCS1703A]
Length = 189
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 92/147 (62%), Gaps = 3/147 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN GF +D+ + +KKF AE E ++ + L+KP
Sbjct: 4 LIVGLGNPGEQYQKTRHNAGFWLLDQTAQDYSCRLRTEKKFFAEFGEIAINQQKIFLLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-ISE 120
QTFMN SG+SL V FY + + L+IHD+LDL G ++LK GG GHNGL+ I+
Sbjct: 64 QTFMNASGKSLAAVCRFYHIEP-QQILIIHDELDLPEGKIKLKKSGGHGGHNGLRDIIAA 122
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVL 147
+++ RLRIGIGRP ++ +I +VL
Sbjct: 123 LASQDFYRLRIGIGRPENSTQVIDYVL 149
>gi|326514970|dbj|BAJ99846.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 231
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 94/156 (60%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN+GF ID I K+F + + +G + + +L KP
Sbjct: 31 WLFVGLGNPGRMYKGTRHNVGFEMIDAIAEAEGISVSTKQFKSMVGKGLIGDVPVMLAKP 90
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFMN SG+S+ ++++++K+P L ++I+DDLDL F LRL GG GHNG++S+
Sbjct: 91 QTFMNASGESVGQLVSYFKIP-LNQVVLIYDDLDLPFAKLRLLPKGGHGGHNGVRSVIHH 149
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K +++ RLRIGIGRP I VL FS E+
Sbjct: 150 LKQSRDFPRLRIGIGRPTGMMGAIGFVLRAFSKEEQ 185
>gi|299536724|ref|ZP_07050034.1| peptidyl-tRNA hydrolase [Lysinibacillus fusiformis ZC1]
gi|298727838|gb|EFI68403.1| peptidyl-tRNA hydrolase [Lysinibacillus fusiformis ZC1]
Length = 188
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 103/184 (55%), Gaps = 2/184 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+ GLGNPG Y RHNIGF ID + P KF+ + + +L+K
Sbjct: 1 MKIIVGLGNPGKPYEHTRHNIGFDVIDALAEKWGTPLTNSKFNGMYTTVHRPEGKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M+++ + +E+ +VI+DDLDL+ G LRL+ G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECVGPLMDYFDI-EIEDLIVIYDDLDLETGKLRLRQKGSAGGHNGIKSLIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GI RPP + +VL FS ++ + I N ++ + +
Sbjct: 120 HLGTQEFNRIRVGINRPPAGMKVADYVLAKFSKEDQVLMQDAIVNSVNAVEASLSKPFLD 179
Query: 180 FLNH 183
+NH
Sbjct: 180 VMNH 183
>gi|183220682|ref|YP_001838678.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189910783|ref|YP_001962338.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167775459|gb|ABZ93760.1| Peptidyl -tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779104|gb|ABZ97402.1| Peptidyl-tRNA hydrolase (PTH) [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 188
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 98/163 (60%), Gaps = 4/163 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG +Y RHNIGFM +DR+ + K +AE + +G + L+KP
Sbjct: 4 FLIVGLGNPGDKYKHTRHNIGFMILDRLATEFGVSFKDAKKYAETTY-SWEGDKIHLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMNLSG++ + N YK+P LV+ D++DL FG ++ K GGG AGHNGLK I K
Sbjct: 63 LEFMNLSGKATQTLANLYKIPP-SQILVVQDEVDLPFGKIKNKIGGGTAGHNGLKDIVAK 121
Query: 122 CG-KNYKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPII 162
G +++ RLR G+G+P + VL NF++ ER L +I
Sbjct: 122 LGSQDFHRLRFGVGKPEKGGMEVADFVLQNFNAEERNTLDSLI 164
>gi|206889681|ref|YP_002249252.1| peptidyl-tRNA hydrolase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|226709070|sp|B5YG54|PTH_THEYD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|206741619|gb|ACI20676.1| peptidyl-tRNA hydrolase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 187
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 107/174 (61%), Gaps = 4/174 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHN+GFM +D + + + +K+K I+E +L+ +IK
Sbjct: 1 MIVIVGLGNPGRKYAKTRHNVGFMVVDEL-ARKYGLVFKEKNDYYITEWRLENKDITIIK 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNL-ENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSG ++ +V+N L NL E+ +VIHDD+D+ G +++K G GH G++SI
Sbjct: 60 PTTYMNLSGTAVKKVVNEKILKNLPESLIVIHDDVDMPLGKIKIKKNGSSGGHKGVQSII 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ G K++ R++IGIG+ P + +VL F+S +R + I S+ ++
Sbjct: 120 DSLGTKDFIRIKIGIGKNP-YQDVSEYVLSPFTSEQRAKIQEKISEAVESIVVI 172
>gi|227888874|ref|ZP_04006679.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii ATCC 33200]
gi|227850567|gb|EEJ60653.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii ATCC 33200]
Length = 185
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y + +HN GFM +D + K KF ++ +++G I ++
Sbjct: 1 MKLIAGLGNPGRKYDQTKHNTGFMALDHYLEKNGLTLDKDKFEGLWTKQKINGEDVIFLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +V NF+K+ E+ LVIHDD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNDSGKSIAQVANFFKIK-PEDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G N+ RL+IGI R P+ ++ VL F++ ++ +
Sbjct: 120 CLGTNNFNRLKIGI-RHPENESVVSWVLSPFNNDQQKLM 157
>gi|330718521|ref|ZP_08313121.1| peptidyl-tRNA hydrolase [Leuconostoc fallax KCTC 3537]
Length = 188
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 105/174 (60%), Gaps = 9/174 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTI 57
M + GLGN G +Y RHNIGFM ID + ++ F P+ + + A+I+ +DG+ +
Sbjct: 1 MKYIFGLGNIGKKYENTRHNIGFMAIDALAEKYNATFLPSKQFAYTAKIN---IDGVAVM 57
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KP T+MN SGQ++ ++++Y N+E+ LV+ DD+D+ FG LR + G GHNGLKS
Sbjct: 58 LVKPTTYMNESGQAVRAILDYYN-GNIEDVLVLVDDMDMPFGKLRFRDKGSAGGHNGLKS 116
Query: 118 ISEKCG-KNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
I G N+ RL+ G+G P + +I +VLG FS E+ + + D ++
Sbjct: 117 IMSHIGSSNFLRLKFGVGHPNHEKQAVINYVLGQFSQQEQITVNEMFDRSTSAM 170
>gi|219363585|ref|NP_001137055.1| hypothetical protein LOC100217227 [Zea mays]
gi|194698178|gb|ACF83173.1| unknown [Zea mays]
Length = 239
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 95/176 (53%), Gaps = 3/176 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GF ID P F A + EG +DG+ +L KP
Sbjct: 37 WLFVGLGNPGEKYQSTRHNVGFDMIDAFAQSQGIPLTTHYFKALLGEGMVDGVPVLLAKP 96
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S+ + +YKLP L LV DD+DL G LRL+ GG HNGLKS+
Sbjct: 97 QTYMNLSGESVGPLAAYYKLP-LNRVLVAFDDMDLPCGVLRLQPKGGSGRHNGLKSVIYH 155
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KN + RLRIGIGRP VL F+ R + + L ++A R
Sbjct: 156 FRKNREFCRLRIGIGRPAGQMDPKAFVLQKFNRTGRERIDSAVREGVDILKMVAAR 211
>gi|268678854|ref|YP_003303285.1| peptidyl-tRNA hydrolase [Sulfurospirillum deleyianum DSM 6946]
gi|268616885|gb|ACZ11250.1| peptidyl-tRNA hydrolase [Sulfurospirillum deleyianum DSM 6946]
Length = 191
Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 110/177 (62%), Gaps = 7/177 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL-DGLRTILI 59
M ++ GLGNP +Y NRHN+GFM ID + H +K +G+L +L+
Sbjct: 1 MTLIVGLGNPDFQYKNNRHNVGFMVIDALLDDH---PLAEKISKTAFKGELFKAPSILLL 57
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S+ V +++K P E +VIHDDLDL FGTLR K GGG GHNGL+SI
Sbjct: 58 KPNTYMNLSGESVRAVSDYFK-P--EQIIVIHDDLDLPFGTLRFKIGGGHGGHNGLRSID 114
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G Y R+RIGIG+P + + ++VL +FS+ +R L ++ ++ RS+ L K +
Sbjct: 115 AHMGSEYIRVRIGIGKPTHKSDVAKYVLSDFSACQREALPALLLHVKRSVMALLKED 171
>gi|296140893|ref|YP_003648136.1| peptidyl-tRNA hydrolase [Tsukamurella paurometabola DSM 20162]
gi|296029027|gb|ADG79797.1| peptidyl-tRNA hydrolase [Tsukamurella paurometabola DSM 20162]
Length = 194
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 109/177 (61%), Gaps = 3/177 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
IV GLGNPG +Y RHNIGF +D + + + KK AE++ +L G L K
Sbjct: 6 LIVVGLGNPGEKYAGTRHNIGFDVVDELATRARTSFSRHKKSGAEVAGARLAGRPVYLAK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ+FMNLSGQ + + FY + + + +HD+LD+DFG +RLK GGG+ GHNGL+S+++
Sbjct: 66 PQSFMNLSGQPVSALARFYSV-EPTDVIAVHDELDIDFGLVRLKRGGGEGGHNGLRSLTQ 124
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G K+Y R+R GIGRPP +VL F+S ER + ++ N A ++ LL R+
Sbjct: 125 HLGTKDYLRVRAGIGRPPGRQDPADYVLKPFASAERTEVPLLVTNAADAVELLISRD 181
>gi|218295192|ref|ZP_03496028.1| Aminoacyl-tRNA hydrolase [Thermus aquaticus Y51MC23]
gi|218244395|gb|EED10920.1| Aminoacyl-tRNA hydrolase [Thermus aquaticus Y51MC23]
Length = 184
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 99/170 (58%), Gaps = 11/170 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF+V G GNPG Y RHN+GFM +DR+ P ++KK A ++E + + +K
Sbjct: 1 MFLVVGQGNPGEAYARTRHNVGFMVLDRLG----LP-FRKKGEALVAEAR----GGLFVK 51
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+ NL+G+ + + FYK+P E LV+HD++DL G LR + GG AG+ G+ SI+E
Sbjct: 52 PLTYYNLTGRVVAPLARFYKIPP-ERILVVHDEMDLPLGRLRFRAGGSAAGNRGVASIAE 110
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + RLRIGIG+PP +VL FS E L +++ +++
Sbjct: 111 ALGTTGFHRLRIGIGKPPAKELGAAYVLSPFSEEEAPILARVLEAAEKAV 160
>gi|300362408|ref|ZP_07058584.1| aminoacyl-tRNA hydrolase [Lactobacillus gasseri JV-V03]
gi|300353399|gb|EFJ69271.1| aminoacyl-tRNA hydrolase [Lactobacillus gasseri JV-V03]
Length = 185
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 99/164 (60%), Gaps = 3/164 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y + +HN GFM +D + + K KF ++ +++G I ++
Sbjct: 1 MKLIAGLGNPGKKYDQTKHNTGFMALDHYLNKNNLDLDKDKFEGLWTKQKINGEDVIFLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +V NF+K+ E+ LVIHDD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNDSGKSIAQVANFFKIA-PEDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G N+ RL+IGI R P ++ VL F+ ++ + D
Sbjct: 120 CLGTNNFNRLKIGI-RHPQKESVVSWVLSPFNDEQQKLMDAAFD 162
>gi|281356646|ref|ZP_06243137.1| peptidyl-tRNA hydrolase [Victivallis vadensis ATCC BAA-548]
gi|281316773|gb|EFB00796.1| peptidyl-tRNA hydrolase [Victivallis vadensis ATCC BAA-548]
Length = 205
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 92/153 (60%), Gaps = 9/153 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA--WKKKFHAE--ISEGQLDGLRTIL 58
+V GLGNPG EY RHN+GFM IDR+ FPA +++K AE + G G IL
Sbjct: 10 LVVGLGNPGSEYDGTRHNVGFMVIDRL--LAAFPAGRFEEKHVAESRVFTGNFRGRSLIL 67
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
KP TFMNLSG ++ + + E LVI DDLDL G LRL+ GG D GHNGLKSI
Sbjct: 68 QKPLTFMNLSGNAVAPLARKLGIAP-EAILVISDDLDLPLGRLRLRAGGADGGHNGLKSI 126
Query: 119 SEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNF 150
+ G ++KRLR+GIGR P + +VL F
Sbjct: 127 IAELGSASFKRLRVGIGR-PKPGETVDYVLSKF 158
>gi|218188893|gb|EEC71320.1| hypothetical protein OsI_03361 [Oryza sativa Indica Group]
Length = 250
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 93/156 (59%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN+GF ID I +F A + +G++ +L KP
Sbjct: 56 WLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAKP 115
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFMN SG+S+ ++++++K+P L LV++DDLDL F LRL GG GHNG++SI
Sbjct: 116 QTFMNASGESVGQLVSYFKIP-LNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGMRSIINH 174
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K +++ RLRIGIGRPP VL F+ E+
Sbjct: 175 LKQNRDFPRLRIGIGRPPGKMDPANFVLRPFNRKEQ 210
>gi|110639010|ref|YP_679219.1| peptidyl-tRNA hydrolase [Cytophaga hutchinsonii ATCC 33406]
gi|119390930|sp|Q11RT7|PTH_CYTH3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110281691|gb|ABG59877.1| peptidyl-tRNA hydrolase [Cytophaga hutchinsonii ATCC 33406]
Length = 188
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM +D + + K HA I+E ++ G IL+KP
Sbjct: 3 YLIIGLGNIGSEYHETRHNIGFMVLDDLAQEKGV-TFDLKRHAHIAEVKVKGRTLILVKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M K+ LEN LVI DDL L FGTLR++ G GHNGL I +
Sbjct: 62 TTYMNLSGKAVQYWMQEEKIA-LENILVITDDLALPFGTLRMRMKGSSGGHNGLSHIEQT 120
Query: 122 -CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
NY RLR+G+G + +VL FS+ E+
Sbjct: 121 LASANYTRLRMGVGSDFAKGQQVDYVLAPFSAEEQ 155
>gi|297616312|ref|YP_003701471.1| peptidyl-tRNA hydrolase [Syntrophothermus lipocalidus DSM 12680]
gi|297144149|gb|ADI00906.1| peptidyl-tRNA hydrolase [Syntrophothermus lipocalidus DSM 12680]
Length = 191
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 95/155 (61%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY RHN+GFM ++ + H + K + ++ + G ++ K
Sbjct: 1 MKLVVGLGNPGKEYQGTRHNLGFMVVEELVRRHGVKRQEYKHSSVMAWLECHGEEVVVAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ +++ KL NLE+ LVI DDLDL+ G +R++ GG GH GL S+
Sbjct: 61 PLTYMNRSGQAVKPLVSALKL-NLEDVLVICDDLDLETGRIRIRPRGGSGGHRGLASVIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + + RLR+GIGRPP +I +VL F++ E
Sbjct: 120 SLGTEEFARLRVGIGRPPTGEDVIDYVLDGFTASE 154
>gi|294101747|ref|YP_003553605.1| peptidyl-tRNA hydrolase [Aminobacterium colombiense DSM 12261]
gi|293616727|gb|ADE56881.1| peptidyl-tRNA hydrolase [Aminobacterium colombiense DSM 12261]
Length = 196
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 105/188 (55%), Gaps = 7/188 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTIL 58
M ++ GLGNPG EY RHNIG+M +DR+ S + +F + G L G + +L
Sbjct: 1 MRLIVGLGNPGVEYALTRHNIGWMVLDRLCSRYSAGNASLRFEGMV-WGPLFIKGEKCLL 59
Query: 59 IKPQTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
+KP TFMNLSG+S+ +V ++Y+ LP E LVI DD L FG LRL+T G GHNGL S
Sbjct: 60 LKPLTFMNLSGRSVAQVCHYYQILP--EETLVISDDAALPFGQLRLRTKGSAGGHNGLAS 117
Query: 118 ISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
+ RLR+G+G P ++ V+G F ER L +I+ A ++ L E
Sbjct: 118 VLGALRTLGVPRLRVGVGAAPAERDMVSWVIGTFLPEERSLLPDVIEKAANAVELWLMEE 177
Query: 177 DVSFLNHI 184
+ ++ I
Sbjct: 178 IQTAMSQI 185
>gi|268608428|ref|ZP_06142155.1| peptidyl-tRNA hydrolase [Ruminococcus flavefaciens FD-1]
Length = 208
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 110/183 (60%), Gaps = 3/183 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG EY RHN GFM +D + S + +F + +E + R +L+KP
Sbjct: 23 YVIAGLGNPGMEYDNTRHNAGFMVLDMLASQLGEEINRLRFKGKTAEVMIGDKRCLLLKP 82
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S+++ + FYK+ ++++ +V+ DD+ LD G LR++ G GHNGL+SI +
Sbjct: 83 TTYMNNSGESIVQALEFYKI-DVDHLIVVCDDISLDAGKLRIRRKGSHGGHNGLRSICDL 141
Query: 122 CGK-NYKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+ +Y+R+++G+G+ P + + + VLG F + + +N L L+ + +
Sbjct: 142 TGRDDYQRIKMGVGKKPHPDYDLAKWVLGKFGKEDAEKMKQSAENACECLKLMVQGKTDE 201
Query: 180 FLN 182
+N
Sbjct: 202 AMN 204
>gi|160887364|ref|ZP_02068367.1| hypothetical protein BACOVA_05383 [Bacteroides ovatus ATCC 8483]
gi|156107775|gb|EDO09520.1| hypothetical protein BACOVA_05383 [Bacteroides ovatus ATCC 8483]
Length = 219
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 34 YLVVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFMDGRYGFTTSFSIKGRQLILLKP 93
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 94 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAI 152
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +NY RLR GIG I +VLG+F+ +
Sbjct: 153 LGTQNYARLRFGIGSDFPRGGQIDYVLGHFTDED 186
>gi|218283271|ref|ZP_03489326.1| hypothetical protein EUBIFOR_01915 [Eubacterium biforme DSM 3989]
gi|218215961|gb|EEC89499.1| hypothetical protein EUBIFOR_01915 [Eubacterium biforme DSM 3989]
Length = 186
Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 103/175 (58%), Gaps = 3/175 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+ GLGN G EY RHN GFM ID++ ++KF A S+ ++DG IL+K
Sbjct: 1 MKIIIGLGNIGREYENTRHNAGFMAIDKLAQMLEMDFNQEKFSAYFSKKKIDGEDIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG +L + M+FYK+ + E+ LV++DD+D+ G LRL+ G GHNG+KSI
Sbjct: 61 PTTYMNNSGIALRQCMDFYKV-SAEDILVLYDDMDMPVGKLRLRQKGSAGGHNGIKSIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G + + R+RIGIG+ ++ VLG F ++ L ++ A++ K
Sbjct: 120 HIGTQEFDRIRIGIGKDK-MIPVVDWVLGKFPQEQQEDLNHALEQAAKAAKFSIK 173
>gi|46199526|ref|YP_005193.1| peptidyl-tRNA hydrolase [Thermus thermophilus HB27]
gi|55981557|ref|YP_144854.1| peptidyl-tRNA hydrolase [Thermus thermophilus HB8]
gi|68052894|sp|Q5SHZ2|PTH_THET8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052973|sp|Q72IA8|PTH_THET2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|46197152|gb|AAS81566.1| peptidyl-tRNA hydrolase [Thermus thermophilus HB27]
gi|55772970|dbj|BAD71411.1| peptidyl-tRNA hydrolase [Thermus thermophilus HB8]
Length = 183
Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 98/166 (59%), Gaps = 15/166 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF+V G GNPG Y RHN+GFM +DR+ F P + A ++E + + +K
Sbjct: 1 MFLVVGQGNPGERYARTRHNLGFMVLDRL-GLSFRP----RGEALVAEAE----GGLFLK 51
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+ NL+G+++ + FYK+P E LV+HD++DL G +R K GG AG+ G+ SI E
Sbjct: 52 PLTYYNLTGRAVAPLARFYKIPP-ERILVVHDEMDLPLGRIRFKAGGSAAGNRGVLSIEE 110
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
G + + RLR+GIG+PPD + +VL F E LP+++ +
Sbjct: 111 ALGTRAFHRLRLGIGKPPDPSRGAEYVLSPFREEE----LPVVERV 152
>gi|297626905|ref|YP_003688668.1| Peptidyl-tRNA hydrolase (aminoacyl-tRNA hydrolase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922670|emb|CBL57247.1| Peptidyl-tRNA hydrolase (aminoacyl-tRNA hydrolase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 197
Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 109/179 (60%), Gaps = 13/179 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI--HSFHFFPAWKKKFHAEISEGQL--DGL--- 54
++V GLGNPG +Y RHNIGF+ +D + + F A + HAE + ++ G+
Sbjct: 4 WLVVGLGNPGPQYANTRHNIGFLTVDELARRAGERFSA-SRGMHAETASTRIGPQGIGGP 62
Query: 55 ---RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG 111
+ +L KP+TFMN SG+++ ++ +F + ++ +V+HD+LDLD G LR+K GGGD G
Sbjct: 63 APEKLVLAKPRTFMNESGRAVRKLSDFLDI-EPDHIIVVHDELDLDPGRLRIKLGGGDNG 121
Query: 112 HNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
HNGLKSI G ++ R+R+GIGRP +VLG FS ER L +D+ A ++
Sbjct: 122 HNGLKSIRAHLGTGDFYRVRLGIGRPQGHRAGADYVLGRFSKAEREELAIEVDDGAEAV 180
>gi|145295096|ref|YP_001137917.1| peptidyl-tRNA hydrolase [Corynebacterium glutamicum R]
gi|140845016|dbj|BAF54015.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 180
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 100/156 (64%), Gaps = 9/156 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI--HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+V GLGNPG +Y RHNIGF + + SF F A K+ + +I+ QL GL I+
Sbjct: 9 LLVVGLGNPGPKYVGTRHNIGFEVAEELVSRSFGSFSAHKRS-NTDIA--QLPGL--IVA 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP++FMNLSG + + +F+K+ + N +V+HD+L+LDFG+++L+ GGGD GHNGLKS S
Sbjct: 64 KPRSFMNLSGTPIRALCDFFKI-SPANVIVVHDELELDFGSVKLRQGGGDHGHNGLKSTS 122
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ G K+Y +L +GIGRPP VL F E
Sbjct: 123 KSLGTKDYWKLSMGIGRPPGRMDPASFVLKPFGKQE 158
>gi|300932603|ref|ZP_07147859.1| hypothetical protein CresD4_00920 [Corynebacterium resistens DSM
45100]
Length = 225
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 99/163 (60%), Gaps = 8/163 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-----WKKKFHAEISEGQLDGLRT 56
+++ GLGNPG +Y RHN G++ +D + + PA +K ++ I + ++
Sbjct: 35 WLIVGLGNPGDKYTTTRHNAGYLVVDELLA-DLLPAPGSLAQHRKTNSLICQSRIGETPV 93
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
IL +P+T+MN SG + + F+K+P E +VI+D+LDLD +R++ GGGD GHNGL+
Sbjct: 94 ILARPRTYMNESGAPVANLAKFFKVP-AERVIVIYDELDLDPEKVRVRMGGGDHGHNGLR 152
Query: 117 SISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
SI++ G K Y R+ +GIGRPP + +VL FS E +L
Sbjct: 153 SITKALGTKEYVRIALGIGRPPGRMDVASYVLKPFSKAENAWL 195
>gi|213962334|ref|ZP_03390597.1| peptidyl-tRNA hydrolase [Capnocytophaga sputigena Capno]
gi|213955000|gb|EEB66319.1| peptidyl-tRNA hydrolase [Capnocytophaga sputigena Capno]
Length = 188
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 96/160 (60%), Gaps = 4/160 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++A LGN G EY RHNIGFM D + H +K +++E ++ G IL+KP
Sbjct: 4 YLIACLGNIGAEYANTRHNIGFMVADTLAKTHNVTFSTQKL-GDLTEIKVKGRTFILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M +P LEN LVI DDL++ FGT+R+K G D GHNGLK I +
Sbjct: 63 STYMNLSGKAVRYWMEKENIP-LENLLVITDDLNIPFGTIRIKGKGSDGGHNGLKDIQAQ 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLP 160
+ Y RLR GI ++ I +VLG + +PE LLP
Sbjct: 122 LNTQQYARLRFGISSNFESGRQIDYVLGEW-APEEKVLLP 160
>gi|41407076|ref|NP_959912.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|254774033|ref|ZP_05215549.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp. avium ATCC
25291]
gi|68052977|sp|Q741V9|PTH_MYCPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|41395427|gb|AAS03295.1| Pth [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 191
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 107/174 (61%), Gaps = 5/174 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF--HFFPAWKKKFHAEISEGQLDGLRTILI 59
+V GLGNPG Y RHN+GFM D + + F A K+ AEI G+L G ++
Sbjct: 5 LLVVGLGNPGDNYARTRHNVGFMVADLLAARMGSKFKAHKRS-GAEIVSGRLAGRSVVVA 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+ +MN SG+ + + FY +P + +VIHDDLDLDFG +RLK GGG+ GHNGL+S++
Sbjct: 64 KPRCYMNESGRQVGPLAKFYSVPP-GDIIVIHDDLDLDFGRIRLKIGGGEGGHNGLRSVA 122
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K+++R+RIGIGRPP VL NF+S ER + I + A + LL
Sbjct: 123 NALGSKDFQRVRIGIGRPPGRKDPAAFVLENFTSTERADVPTICEQAADATELL 176
>gi|237722655|ref|ZP_04553136.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_2_4]
gi|229448465|gb|EEO54256.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_2_4]
Length = 189
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 4 YLVVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFMDGRYGFTTSFSIKGRQLILLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 64 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAI 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +NY RLR GIG I +VLG+F+ +
Sbjct: 123 LGTQNYARLRFGIGSDFPRGGQIDYVLGHFTDED 156
>gi|123967809|ref|YP_001008667.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. AS9601]
gi|166229436|sp|A2BP49|PTH_PROMS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|123197919|gb|ABM69560.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. AS9601]
Length = 200
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 109/193 (56%), Gaps = 8/193 (4%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+ GLGNPG +Y +RHNIGF+ ++ ++ K K + SE Q++ L P
Sbjct: 6 LIGLGNPGKKYFNSRHNIGFLLLESFSKKYNSNFLLKDKLKSSCSEFQINNSTFKLFLPN 65
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMN SG ++ ++++YK+ NL+ L+I DD DL G +R + G GHNGLKSI E+
Sbjct: 66 TFMNNSGDAVRAIVDWYKI-NLDQILIIVDDKDLPLGKIRFRRKGSSGGHNGLKSIIEQL 124
Query: 123 -GKNYKRLRIGIGRPPDTA-----HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
+N+KR+RIGIG PP T + I HVLGN S E+ L + + SL + ++
Sbjct: 125 QTQNFKRIRIGIGSPPITNGKNHFNTISHVLGNISLDEKSILDKVYSRVIESLEQINTKK 184
Query: 177 DVSFLNHIVSVRK 189
+ +N + S K
Sbjct: 185 EEYIINELNSFDK 197
>gi|313900957|ref|ZP_07834447.1| aminoacyl-tRNA hydrolase [Clostridium sp. HGF2]
gi|312954377|gb|EFR36055.1| aminoacyl-tRNA hydrolase [Clostridium sp. HGF2]
Length = 186
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF +D I +KKF A I ++ G +L+K
Sbjct: 1 MKLIVGLGNPGKEYEMTRHNSGFCVLDAIAEECRVDVTQKKFKALIENTRISGEAVVLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+++ M+FYKL + ++ LVI+DDLDL G +RL+ G G NG+K+I
Sbjct: 61 PQTFMNLSGEAVRAAMDFYKL-SAQDLLVIYDDLDLPVGKIRLRAQGSAGGQNGMKNIIR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + + R+R+GIG+ +I VLG E
Sbjct: 120 HIGTQEFDRIRVGIGKDARIP-VIDWVLGKIRREE 153
>gi|254423495|ref|ZP_05037213.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 7335]
gi|196190984|gb|EDX85948.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 7335]
Length = 220
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 97/167 (58%), Gaps = 8/167 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y RHNIGF ID + +SF K+F E G R +L+K
Sbjct: 26 LIVGLGNPGTKYERTRHNIGFEIIDALANSFSNVSLTPNKRFQGATGEFWSAGERVVLLK 85
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ V+++YKL LVI+DD+DL G LR++ GG GHNG+KSI
Sbjct: 86 PTTYMNRSGQAVRAVLDWYKLEPTA-VLVIYDDMDLPTGRLRMRLSGGAGGHNGMKSIIS 144
Query: 121 KCG-KNYKRLRIGIGRPPDTAH----IIRHVLGNFSSPERYFLLPII 162
G K + RLR+G+G + ++ HVLG FS +R + +I
Sbjct: 145 HLGTKEFPRLRVGVGSADKSGDRDGAVVSHVLGRFSPSDRKIVDAVI 191
>gi|91775029|ref|YP_544785.1| peptidyl-tRNA hydrolase [Methylobacillus flagellatus KT]
gi|91709016|gb|ABE48944.1| peptidyl-tRNA hydrolase [Methylobacillus flagellatus KT]
Length = 213
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 102/174 (58%), Gaps = 8/174 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEI--SEGQLDG-LRTILI 59
+ GLGNPG +Y + RHN GF ID++ + A K A+ G+L+G T L+
Sbjct: 27 LFVGLGNPGAQYEDTRHNAGFWWIDQLCAQ---TASKTTLEAKFFGLSGRLNGHADTWLL 83
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ + FYK+P E LV+HD+LDL G RLK GGG +GHNGLK I+
Sbjct: 84 KPTTFMNASGRAVAALARFYKIPA-EQILVVHDELDLPPGAARLKKGGGHSGHNGLKDIA 142
Query: 120 EKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ G N + RLR+GIG P D + ++ +VL E + +D+ LP L
Sbjct: 143 AQLGTNDFWRLRLGIGHPGDRSAVVNYVLNAPLRDEMQQIAYAMDDSMLVLPQL 196
>gi|325298381|ref|YP_004258298.1| Peptidyl-tRNA hydrolase [Bacteroides salanitronis DSM 18170]
gi|324317934|gb|ADY35825.1| Peptidyl-tRNA hydrolase [Bacteroides salanitronis DSM 18170]
Length = 187
Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 100/174 (57%), Gaps = 6/174 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM +D + +K + + + G + IL+KP
Sbjct: 3 YLIVGLGNIGDEYHETRHNIGFMVLDALAKASNI-VFKDGRYGATASLSIKGRQLILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M K+P LEN L++ DDL L G+LRLK G DAGHNGLK I+
Sbjct: 62 STYMNLSGNAVRYWMQQEKIP-LENVLIVVDDLALPLGSLRLKGKGSDAGHNGLKHIAST 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL---LPIIDNIARSLPL 171
G +NY RLR GIG I +VLG+F E+ L + I + I +S L
Sbjct: 121 LGTQNYARLRFGIGNNFPKGGQIDYVLGHFDEEEQKALPERIAIAEEIIKSFCL 174
>gi|297528421|ref|YP_003669696.1| peptidyl-tRNA hydrolase [Geobacillus sp. C56-T3]
gi|297251673|gb|ADI25119.1| peptidyl-tRNA hydrolase [Geobacillus sp. C56-T3]
Length = 186
Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 94/164 (57%), Gaps = 6/164 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG EY + RHN+GF ID + KF + G + L K
Sbjct: 1 MKLFVGLGNPGEEYEQTRHNVGFFVIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M++Y + +++ +VI+DDLDL G +RL+ G GHNG+KS+
Sbjct: 61 PLTYMNLSGECVRPLMDYYDIA-IDDVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIH 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G + +KR+RIGIGRP + +VLG F+ E+ P +D
Sbjct: 120 HLGTEQFKRIRIGIGRPTGGQPVTDYVLGRFTEEEK----PAVD 159
>gi|242058417|ref|XP_002458354.1| hypothetical protein SORBIDRAFT_03g031890 [Sorghum bicolor]
gi|241930329|gb|EES03474.1| hypothetical protein SORBIDRAFT_03g031890 [Sorghum bicolor]
Length = 247
Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 93/156 (59%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN+GF ID I +F A + +G++ +L KP
Sbjct: 53 WLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAKP 112
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFMN SG+S+ ++++++K+P L +V++DDLDL F LRL GG GHNG++SI
Sbjct: 113 QTFMNASGESVGQLVSYFKIP-LNQVVVMYDDLDLPFAKLRLLPKGGHGGHNGMRSIVNH 171
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K +++ RLRIGIGRPP VL F+ E+
Sbjct: 172 LKQSRDFPRLRIGIGRPPGKMDPANFVLRPFNKKEQ 207
>gi|227894500|ref|ZP_04012305.1| peptidyl-tRNA hydrolase [Lactobacillus ultunensis DSM 16047]
gi|227863659|gb|EEJ71080.1| peptidyl-tRNA hydrolase [Lactobacillus ultunensis DSM 16047]
Length = 185
Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 105/182 (57%), Gaps = 3/182 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y + +HN GFM +D + K KF ++ +++G IL++
Sbjct: 1 MKIIAGLGNPGQKYDKTKHNTGFMTMDHYLNEKGLSLDKDKFEGHWTKQKVNGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ +V NF+K+ + E+ L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNESGRSVSQVANFFKV-DPEDVLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + RL+IGI R P A ++ VL F+ ++ + D + + D
Sbjct: 120 DLGTEKFNRLKIGI-RHPKNATVVSWVLTPFNDEQQKLMDDAFDTSVKIIDDFIAGHDSQ 178
Query: 180 FL 181
+L
Sbjct: 179 YL 180
>gi|309777977|ref|ZP_07672919.1| aminoacyl-tRNA hydrolase [Erysipelotrichaceae bacterium 3_1_53]
gi|308914266|gb|EFP60064.1| aminoacyl-tRNA hydrolase [Erysipelotrichaceae bacterium 3_1_53]
Length = 186
Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF +D I +KKF A I+ ++ +L+K
Sbjct: 1 MKLIVGLGNPGKEYEMTRHNSGFCVLDAIAEECRVDIAQKKFKALIANTRIGSESVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+++ M+FYKL + EN LVI+DDLDL G +RL+ G G NG+K+I
Sbjct: 61 PQTFMNLSGEAVRAAMDFYKL-SAENLLVIYDDLDLPVGKIRLRAQGSAGGQNGMKNIIR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + + R+R+GIG+ +I VLG E
Sbjct: 120 HIGTQEFDRIRVGIGKDARIP-VIDWVLGKIRKEE 153
>gi|261417546|ref|YP_003251228.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC61]
gi|319765203|ref|YP_004130704.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC52]
gi|261374003|gb|ACX76746.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC61]
gi|317110069|gb|ADU92561.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC52]
Length = 186
Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG EY + RHN+GF ID + KF + G + L K
Sbjct: 1 MKLFVGLGNPGEEYEQTRHNVGFFVIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M++Y + +++ +VI+DDLDL G +RL+ G GHNG+KS+
Sbjct: 61 PLTYMNLSGECVRPLMDYYDIA-IDDVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIH 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G + +KR+RIGIGRP + +VLG F+ E+ P +D
Sbjct: 120 HLGTEQFKRIRIGIGRPTGGQPVTDYVLGRFTEEEK----PAVDK 160
>gi|296392943|ref|YP_003657827.1| peptidyl-tRNA hydrolase [Segniliparus rotundus DSM 44985]
gi|296180090|gb|ADG96996.1| peptidyl-tRNA hydrolase [Segniliparus rotundus DSM 44985]
Length = 186
Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 100/183 (54%), Gaps = 21/183 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID----------RIHSFHFFPAWKKKFHAEISEGQLD 52
++AGLGNPG +Y + RHN+G M +D R H A + FH
Sbjct: 1 MIAGLGNPGPKYEKTRHNVGHMVVDLLLARAGGSLRAHKTSGMLAARLSFH--------- 51
Query: 53 GLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGH 112
G IL KP +MN+ G + ++ ++ +P + + +HD+LD+ FG +RLK GGG+AGH
Sbjct: 52 GRGVILGKPTAYMNVCGPQIAKLAKYFSVPA-ADVVAVHDELDIGFGLVRLKRGGGEAGH 110
Query: 113 NGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
NGL+S+S G K Y R+R+G+GRPP VL F + ER L +++ A ++
Sbjct: 111 NGLRSLSSSLGTKEYCRVRVGVGRPPVGTQTADFVLAGFRADERKELPGLLERSADAVEA 170
Query: 172 LAK 174
L +
Sbjct: 171 LVR 173
>gi|294644677|ref|ZP_06722427.1| aminoacyl-tRNA hydrolase [Bacteroides ovatus SD CC 2a]
gi|294809062|ref|ZP_06767784.1| aminoacyl-tRNA hydrolase [Bacteroides xylanisolvens SD CC 1b]
gi|298482670|ref|ZP_07000854.1| aminoacyl-tRNA hydrolase [Bacteroides sp. D22]
gi|292640011|gb|EFF58279.1| aminoacyl-tRNA hydrolase [Bacteroides ovatus SD CC 2a]
gi|294443787|gb|EFG12532.1| aminoacyl-tRNA hydrolase [Bacteroides xylanisolvens SD CC 1b]
gi|295087141|emb|CBK68664.1| peptidyl-tRNA hydrolase [Bacteroides xylanisolvens XB1A]
gi|298271133|gb|EFI12710.1| aminoacyl-tRNA hydrolase [Bacteroides sp. D22]
Length = 219
Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 34 YLVVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFMDGRYGFTTSFSIKGRQLILLKP 93
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 94 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAI 152
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +NY RLR GIG + +VLG+F+ +
Sbjct: 153 LGTQNYARLRFGIGNDFPRGGQVDYVLGHFTDED 186
>gi|229136898|ref|ZP_04265526.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST26]
gi|228646563|gb|EEL02769.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST26]
Length = 177
Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 92/137 (67%), Gaps = 2/137 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS IS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 120 EKCGKNYKRLRIGIGRP 136
+ ++R+R+GI RP
Sbjct: 141 HLGTQEFQRIRMGIDRP 157
>gi|115439337|ref|NP_001043948.1| Os01g0693900 [Oryza sativa Japonica Group]
gi|75285812|sp|Q5N9Q7|PTHM_ORYSJ RecName: Full=Peptidyl-tRNA hydrolase, mitochondrial; AltName:
Full=M-PTH; Flags: Precursor
gi|56785144|dbj|BAD81799.1| Peptidyl-tRNA hydrolase-like [Oryza sativa Japonica Group]
gi|113533479|dbj|BAF05862.1| Os01g0693900 [Oryza sativa Japonica Group]
gi|215704712|dbj|BAG94340.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619093|gb|EEE55225.1| hypothetical protein OsJ_03102 [Oryza sativa Japonica Group]
Length = 250
Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 93/156 (59%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN+GF ID I +F A + +G++ +L KP
Sbjct: 56 WLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAKP 115
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFMN SG+S+ ++++++K+P L LV++DDLDL F LRL GG GHNG++SI
Sbjct: 116 QTFMNASGESVGQLVSYFKIP-LNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGVRSIINH 174
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K +++ RLRIGIGRPP VL F+ E+
Sbjct: 175 LKQNRDFPRLRIGIGRPPGKMDPANFVLRPFNRKEQ 210
>gi|293370793|ref|ZP_06617339.1| aminoacyl-tRNA hydrolase [Bacteroides ovatus SD CMC 3f]
gi|292634153|gb|EFF52696.1| aminoacyl-tRNA hydrolase [Bacteroides ovatus SD CMC 3f]
Length = 219
Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 34 YLVVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFMDGRYGFTTSFSIKGRQLILLKP 93
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 94 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAI 152
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +NY RLR GIG + +VLG+F+ +
Sbjct: 153 LGTQNYARLRFGIGNDFPRGGQVDYVLGHFTDED 186
>gi|56418581|ref|YP_145899.1| peptidyl-tRNA hydrolase [Geobacillus kaustophilus HTA426]
gi|68052880|sp|Q5L3U7|PTH_GEOKA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56378423|dbj|BAD74331.1| stage V sporulation protein C (peptidyl-tRNA hydrolase)
[Geobacillus kaustophilus HTA426]
Length = 186
Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 94/165 (56%), Gaps = 6/165 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG EY + RHN+GF ID + KF + G + L K
Sbjct: 1 MKLFVGLGNPGKEYEQTRHNVGFFVIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M++Y + +++ +VI+DDLDL G +RL+ G GHNG+KS+
Sbjct: 61 PLTYMNLSGECVRPLMDYYDIA-IDDVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIH 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G + +KR+RIGIGRP + +VLG F+ E+ P +D
Sbjct: 120 HLGTEQFKRIRIGIGRPAGGQPVTDYVLGRFTEEEK----PAVDK 160
>gi|313145681|ref|ZP_07807874.1| peptidyl-tRNA hydrolase [Bacteroides fragilis 3_1_12]
gi|313134448|gb|EFR51808.1| peptidyl-tRNA hydrolase [Bacteroides fragilis 3_1_12]
Length = 199
Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 102/176 (57%), Gaps = 10/176 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH--FFPAWKKKFHAEISEGQLDGLRTILI 59
+++ GLGN G EY E RHNIGFM +D + + F + F A +S + G + IL+
Sbjct: 15 YLIVGLGNIGPEYHETRHNIGFMVLDALAKANNLSFKDGRYGFTATLS---VKGRQMILL 71
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG ++ M +P LEN L+I DDL L FGTLRLK+ G DAGHNGLK I+
Sbjct: 72 KPSTFMNLSGNAVRYWMQKENIP-LENMLIIVDDLALPFGTLRLKSKGSDAGHNGLKHIA 130
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL---LPIIDNIARSLPL 171
G +NY RLR GIG + VLG+F+ + + L IA+S L
Sbjct: 131 AILGTQNYARLRFGIGNDFPKGGQVDFVLGHFTEEDWTTMNERLETAGEIAKSFCL 186
>gi|77919598|ref|YP_357413.1| peptidyl-tRNA hydrolase [Pelobacter carbinolicus DSM 2380]
gi|119390973|sp|Q3A314|PTH_PELCD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|77545681|gb|ABA89243.1| peptidyl-tRNA hydrolase [Pelobacter carbinolicus DSM 2380]
Length = 191
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 112/184 (60%), Gaps = 2/184 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY RHNIGF+ + ++ + + G+ DG T+++
Sbjct: 1 MKLVVGLGNPGPEYAATRHNIGFLVAQKFAQQMGVSLKRQAYQGIVGTGRADGQETMVLL 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG S++ + +E+ +VIHD++DL FG++R+K GGG GHNGL+SI +
Sbjct: 61 PQTYMNRSGVSVVSACKSKGIA-VEDVVVIHDEIDLPFGSIRIKVGGGHGGHNGLRSIVD 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ R+R+G+GRP + ++VLG FSS E+ L +++N ++L +L ++
Sbjct: 120 LLGCRDFLRVRMGVGRPQGQVDVAKYVLGQFSSTEKSQLDNVLENSVKALEVLLQKGAQQ 179
Query: 180 FLNH 183
+N
Sbjct: 180 AMNE 183
>gi|15674255|ref|NP_268428.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes M1 GAS]
gi|71909819|ref|YP_281369.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS5005]
gi|209558592|ref|YP_002285064.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes NZ131]
gi|306826405|ref|ZP_07459719.1| aminoacyl-tRNA hydrolase [Streptococcus pyogenes ATCC 10782]
gi|21263859|sp|Q9A206|PTH_STRP1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391018|sp|Q1JEA1|PTH_STRPB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391019|sp|Q1JP56|PTH_STRPC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391020|sp|Q1JJA3|PTH_STRPD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391022|sp|Q48VW8|PTH_STRPM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226709069|sp|B5XIP6|PTH_STRPZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|13621330|gb|AAK33150.1| putative peptidyl-tRNA hydrolase [Streptococcus pyogenes M1 GAS]
gi|71852601|gb|AAZ50624.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS5005]
gi|209539793|gb|ACI60369.1| Peptidyl-tRNA hydrolase [Streptococcus pyogenes NZ131]
gi|304431400|gb|EFM34395.1| aminoacyl-tRNA hydrolase [Streptococcus pyogenes ATCC 10782]
Length = 189
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 103/177 (58%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HNIGFM ID I + K F A+I ++ + +KP
Sbjct: 4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + ++ + +VI+DDLD++ LRL++ G GHNG+KSI
Sbjct: 64 TTFMNNSGIAVKALLTYYNI-DITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R+++GIGRP +I HV+G F++ + + +D + ++ + D
Sbjct: 123 IGTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQEND 179
>gi|255007965|ref|ZP_05280091.1| peptidyl-tRNA hydrolase [Bacteroides fragilis 3_1_12]
Length = 187
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 102/176 (57%), Gaps = 10/176 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH--FFPAWKKKFHAEISEGQLDGLRTILI 59
+++ GLGN G EY E RHNIGFM +D + + F + F A +S + G + IL+
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMVLDALAKANNLSFKDGRYGFTATLS---VKGRQMILL 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG ++ M +P LEN L+I DDL L FGTLRLK+ G DAGHNGLK I+
Sbjct: 60 KPSTFMNLSGNAVRYWMQKENIP-LENMLIIVDDLALPFGTLRLKSKGSDAGHNGLKHIA 118
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL---LPIIDNIARSLPL 171
G +NY RLR GIG + VLG+F+ + + L IA+S L
Sbjct: 119 AILGTQNYARLRFGIGNDFPKGGQVDFVLGHFTEEDWTTMNERLETAGEIAKSFCL 174
>gi|86156548|ref|YP_463333.1| peptidyl-tRNA hydrolase [Anaeromyxobacter dehalogenans 2CP-C]
gi|119390909|sp|Q2IM62|PTH_ANADE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|85773059|gb|ABC79896.1| peptidyl-tRNA hydrolase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 192
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 108/185 (58%), Gaps = 2/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY RHN+GF+ DR+ KKF AE++E +L R ++K
Sbjct: 1 MKLVVGLGNPGEEYARTRHNVGFVVADRLAQLAGASFTAKKFAAELAEARLGPERVWILK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ + F+KL L++ +V+HDDL+L+ ++LK GGG GHNG+KS++
Sbjct: 61 PQTYMNHSGEAVGAALRFWKL-GLDDLVVVHDDLELEPFRVQLKVGGGHGGHNGVKSVNA 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G Y R+R+G+GRPP +VLG F+ E L ++ + L +
Sbjct: 120 HVGSPEYARVRVGVGRPPPRMDPADYVLGKFAKGEDAELDLCVEQAVEATRLAVELGAAK 179
Query: 180 FLNHI 184
+N +
Sbjct: 180 AMNQV 184
>gi|19745205|ref|NP_606341.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS8232]
gi|139472893|ref|YP_001127608.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes str. Manfredo]
gi|24418601|sp|Q8P327|PTH_STRP8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052905|sp|Q5XEM3|PTH_STRP6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391021|sp|Q1J956|PTH_STRPF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229458|sp|A2RBX7|PTH_STRPG RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|19747294|gb|AAL96840.1| putative peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS8232]
gi|134271139|emb|CAM29349.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes str. Manfredo]
Length = 189
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 103/177 (58%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HNIGFM ID I + K F A+I ++ + +KP
Sbjct: 4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + ++ + +VI+DDLD++ LRL++ G GHNG+KSI
Sbjct: 64 TTFMNNSGIAVKALLTYYNI-DITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R+++GIGRP +I HV+G F++ + + +D + ++ + D
Sbjct: 123 IGTQEFNRIKVGIGRPLKGMTVISHVMGQFNTEDNIAISLTLDRVVNAVKFYLQEND 179
>gi|260060921|ref|YP_003194001.1| peptidyl-tRNA hydrolase [Robiginitalea biformata HTCC2501]
gi|88785053|gb|EAR16222.1| peptidyl-tRNA hydrolase [Robiginitalea biformata HTCC2501]
Length = 188
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++AGLGN G EY E RHNIGF +D + F +++ E+ ++ G + +KP
Sbjct: 4 FLIAGLGNIGDEYAETRHNIGFRILDHLSRSEDF-SFESARLGEVGTWKVKGRSLLCLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+++ ++ K+P L+N LV+ DDL+L FGTLRLKT G D GHNGLK I +
Sbjct: 63 ATYMNRSGRAVQYWLDKEKIP-LQNLLVVTDDLNLPFGTLRLKTKGSDGGHNGLKDIQQI 121
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
G Y R R GIG + +VLG + E+ L +D A
Sbjct: 122 LGTTGYARFRFGIGSEFSKGRQVDYVLGKWEEAEQEALPERLDRSA 167
>gi|329666672|gb|AEB92620.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii DPC 6026]
Length = 185
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 98/159 (61%), Gaps = 3/159 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y + +HN GFM +D + K KF ++ ++G I ++
Sbjct: 1 MKLIAGLGNPGRKYDQTKHNTGFMALDHYLEKNGLTLDKNKFDGLWTKQNINGEDVIFLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +V NF+K+ E+ LVIHDD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNDSGKSIAQVANFFKIK-PEDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G N+ RL+IGI R P+ ++ VL F++ ++ +
Sbjct: 120 CLGTNNFNRLKIGI-RHPENESVVSWVLSPFNNDQQKLM 157
>gi|21909541|ref|NP_663809.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS315]
gi|28894917|ref|NP_801267.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes SSI-1]
gi|25091008|sp|Q8K8Z7|PTH_STRP3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|21903721|gb|AAM78612.1| putative peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS315]
gi|28810162|dbj|BAC63100.1| putative peptidyl-tRNA hydrolase [Streptococcus pyogenes SSI-1]
Length = 189
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 103/177 (58%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HNIGFM ID I + K F A+I ++ + +KP
Sbjct: 4 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVCFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + ++ + +VI+DDLD++ LRL++ G GHNG+KSI
Sbjct: 64 TTFMNNSGIAVKALLTYYNI-DITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R+++GIGRP +I HV+G F++ + + +D + ++ + D
Sbjct: 123 IGTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQEND 179
>gi|315172644|gb|EFU16661.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1346]
Length = 188
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y E +HNIGF+ +D I F A+I+E + + +L+K
Sbjct: 1 MKVIVGLGNPGSKYKETKHNIGFITLDEIAYRQNISFNNSNFEADIAEFFIGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++ ++ + E+ +VI+DDLDL+ G +RL+ G GHNG+KS+
Sbjct: 61 PLTFMNESGRSVGPLLTYFGVDE-EDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNF 150
G N + R++IGIGRP +I HVL F
Sbjct: 120 HLGTNVFPRIKIGIGRPSKNDTVIHHVLSTF 150
>gi|262407249|ref|ZP_06083797.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_1_22]
gi|262354057|gb|EEZ03149.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_1_22]
Length = 189
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 4 YLVVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFMDGRYGFTTSFSIKGRQLILLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 64 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAI 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +NY RLR GIG + +VLG+F+ +
Sbjct: 123 LGTQNYARLRFGIGNDFPRGGQVDYVLGHFTDED 156
>gi|29374897|ref|NP_814050.1| peptidyl-tRNA hydrolase [Enterococcus faecalis V583]
gi|227555902|ref|ZP_03985949.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HH22]
gi|257418652|ref|ZP_05595646.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T11]
gi|46576784|sp|Q839C0|PTH_ENTFA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|29342355|gb|AAO80121.1| peptidyl-tRNA hydrolase [Enterococcus faecalis V583]
gi|227174959|gb|EEI55931.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HH22]
gi|257160480|gb|EEU90440.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T11]
gi|315573563|gb|EFU85754.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0309B]
gi|315582089|gb|EFU94280.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0309A]
Length = 188
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y E +HNIGF+ +D I F A+I+E + + +L+K
Sbjct: 1 MKVIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++ ++ + E+ +VI+DDLDL+ G +RL+ G GHNG+KS+
Sbjct: 61 PLTFMNESGRSVGPLLTYFGVDE-EDLIVIYDDLDLEIGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNF 150
G N + R++IGIGRP +I HVL F
Sbjct: 120 HLGTNVFPRIKIGIGRPSKNDTVIHHVLSTF 150
>gi|154249289|ref|YP_001410114.1| peptidyl-tRNA hydrolase [Fervidobacterium nodosum Rt17-B1]
gi|171769442|sp|A7HKM4|PTH_FERNB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|154153225|gb|ABS60457.1| Aminoacyl-tRNA hydrolase [Fervidobacterium nodosum Rt17-B1]
Length = 180
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 97/162 (59%), Gaps = 12/162 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
IV GLGNPG +Y RHN+GFM +DR+ + +WKK + S+ + G + LIKP
Sbjct: 1 MIVIGLGNPGEKYSNTRHNVGFMVLDRLSN-----SWKKGPNYLYSDINISGEKIKLIKP 55
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+ F LP+ ++ +V++DDLDL G +R++ G GHNG+KSI
Sbjct: 56 MTYMNLSGEV------FKYLPH-DDIIVVYDDLDLPLGKIRIRKNGSAGGHNGIKSIISF 108
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G+++ R+R+GIG P+ +VL NF+ E L II+
Sbjct: 109 IGQDFPRIRVGIGPKPENIDAADYVLSNFTKEEFEVLDKIIN 150
>gi|269926460|ref|YP_003323083.1| peptidyl-tRNA hydrolase [Thermobaculum terrenum ATCC BAA-798]
gi|269790120|gb|ACZ42261.1| peptidyl-tRNA hydrolase [Thermobaculum terrenum ATCC BAA-798]
Length = 193
Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 101/165 (61%), Gaps = 6/165 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG EY RHNIGF+ +D + + + A ++E +DG + IL KP
Sbjct: 5 FLIVGLGNPGKEYEHTRHNIGFLVVDELARRYKSSGFSLIDRALVAEICIDGHKAILAKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ ++ Y L + +VI+DDLDL FGT+R++T G GH G++SI +
Sbjct: 65 VTYMNNSGQAVKLLLRRYNLEYQSSLIVIYDDLDLPFGTIRVRTKGSSGGHRGVQSIIDT 124
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
G N + R+R+GIGR P + +VLG ++ + LP ID++
Sbjct: 125 IGSNEFLRVRVGIGRDPKLDP-VDYVLGRWNKEQ----LPYIDHM 164
>gi|295397824|ref|ZP_06807888.1| aminoacyl-tRNA hydrolase [Aerococcus viridans ATCC 11563]
gi|294973921|gb|EFG49684.1| aminoacyl-tRNA hydrolase [Aerococcus viridans ATCC 11563]
Length = 221
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 95/160 (59%), Gaps = 2/160 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF+ +D H K F E E ++G + I +K
Sbjct: 35 MKLIVGLGNPGKKYEGTRHNIGFIVLDEWAHQHHETFNKTGFKGEYFETFVNGEKVIFLK 94
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ V N+Y +P +E+ LV++DDLD+D G +RL+ G GHNG+KS+
Sbjct: 95 PTTFMNNSGEAVGAVANYYSIP-VEDILVVYDDLDMDPGRIRLRQKGSAGGHNGVKSLIA 153
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL 159
G + +R+++GIG P ++ HVL F + +L
Sbjct: 154 HLGTDKIRRIKLGIGHPGKDGTVVNHVLSRFPKEDHTPML 193
>gi|167957386|ref|ZP_02544460.1| peptidyl-tRNA hydrolase [candidate division TM7 single-cell isolate
TM7c]
Length = 187
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 93/135 (68%), Gaps = 4/135 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW--KKKFHAEISEGQLDGLRTIL 58
M I+ GNPG++Y + RHNIG+M ID++ A+ K KF A I+E L+G + +L
Sbjct: 1 MKIIFAQGNPGNQYEKTRHNIGWMIIDKLAK-QLNAAFIHKPKFSASIAESSLNGEKILL 59
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP TF N +G S +++FYK+ N ++ LV+HDDL +DFG LR++ G DAG+NG+KS+
Sbjct: 60 VKPLTFYNDTGVSARALIDFYKI-NTKDILVLHDDLMIDFGKLRIRLSGRDAGNNGVKSL 118
Query: 119 SEKCGKNYKRLRIGI 133
+ GK++ RLRIGI
Sbjct: 119 NAHLGKDFARLRIGI 133
>gi|39995769|ref|NP_951720.1| peptidyl-tRNA hydrolase [Geobacter sulfurreducens PCA]
gi|68052978|sp|Q74FE6|PTH_GEOSL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|39982533|gb|AAR33993.1| peptidyl-tRNA hydrolase [Geobacter sulfurreducens PCA]
gi|307634728|gb|ADI83502.2| peptidyl-tRNA hydrolase [Geobacter sulfurreducens KN400]
Length = 193
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y RHN GFM +DR+ +K F EG G R +L+KPQ
Sbjct: 5 LIVGLGNPGPKYLWTRHNAGFMVLDRLAHAIGASVTRKSFSGVFGEGAWHGERLLLLKPQ 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-ISEK 121
T+MNLSG+S+ E + F+KLP L + +VIHDDLD+ FG +++K GGG GHNGL+S + E
Sbjct: 65 TYMNLSGRSVAEALRFHKLP-LCDTIVIHDDLDIPFGRVKVKEGGGHGGHNGLRSLVQEL 123
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G + R+R+GIGRP ++ +VL NFS E L ++D
Sbjct: 124 GGAGFVRVRVGIGRPVH-GDVVNYVLTNFSQDEMADLAHLLD 164
>gi|227520042|ref|ZP_03950091.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0104]
gi|229550503|ref|ZP_04439228.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 29200]
gi|256618333|ref|ZP_05475179.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 4200]
gi|256762051|ref|ZP_05502631.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T3]
gi|256956815|ref|ZP_05560986.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DS5]
gi|256964179|ref|ZP_05568350.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HIP11704]
gi|257078485|ref|ZP_05572846.1| peptidyl-tRNA hydrolase [Enterococcus faecalis JH1]
gi|257081544|ref|ZP_05575905.1| peptidyl-tRNA hydrolase [Enterococcus faecalis E1Sol]
gi|257084192|ref|ZP_05578553.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Fly1]
gi|257088019|ref|ZP_05582380.1| peptidyl-tRNA hydrolase [Enterococcus faecalis D6]
gi|257088696|ref|ZP_05583057.1| peptidyl-tRNA hydrolase [Enterococcus faecalis CH188]
gi|257417622|ref|ZP_05594616.1| peptidyl-tRNA hydrolase [Enterococcus faecalis AR01/DG]
gi|294779318|ref|ZP_06744721.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis PC1.1]
gi|300862116|ref|ZP_07108196.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TUSoD Ef11]
gi|307268509|ref|ZP_07549884.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4248]
gi|307274220|ref|ZP_07555428.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0855]
gi|307276445|ref|ZP_07557568.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2134]
gi|307286965|ref|ZP_07567040.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0109]
gi|312901072|ref|ZP_07760361.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0470]
gi|312904635|ref|ZP_07763790.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0635]
gi|227072590|gb|EEI10553.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0104]
gi|229304360|gb|EEN70356.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 29200]
gi|256597860|gb|EEU17036.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 4200]
gi|256683302|gb|EEU22997.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T3]
gi|256947311|gb|EEU63943.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DS5]
gi|256954675|gb|EEU71307.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HIP11704]
gi|256986515|gb|EEU73817.1| peptidyl-tRNA hydrolase [Enterococcus faecalis JH1]
gi|256989574|gb|EEU76876.1| peptidyl-tRNA hydrolase [Enterococcus faecalis E1Sol]
gi|256992222|gb|EEU79524.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Fly1]
gi|256996049|gb|EEU83351.1| peptidyl-tRNA hydrolase [Enterococcus faecalis D6]
gi|256997508|gb|EEU84028.1| peptidyl-tRNA hydrolase [Enterococcus faecalis CH188]
gi|257159450|gb|EEU89410.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ARO1/DG]
gi|294453604|gb|EFG22003.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis PC1.1]
gi|295112542|emb|CBL31179.1| peptidyl-tRNA hydrolase [Enterococcus sp. 7L76]
gi|300848641|gb|EFK76398.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TUSoD Ef11]
gi|306501911|gb|EFM71200.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0109]
gi|306506925|gb|EFM76072.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2134]
gi|306509182|gb|EFM78244.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0855]
gi|306515170|gb|EFM83710.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4248]
gi|310631987|gb|EFQ15270.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0635]
gi|311291818|gb|EFQ70374.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0470]
gi|315026786|gb|EFT38718.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2137]
gi|315032976|gb|EFT44908.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0017]
gi|315036611|gb|EFT48543.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0027]
gi|315145386|gb|EFT89402.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2141]
gi|315151126|gb|EFT95142.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0012]
gi|315160776|gb|EFU04793.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0645]
gi|315165852|gb|EFU09869.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1302]
gi|315171411|gb|EFU15428.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1342]
gi|315579375|gb|EFU91566.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0630]
gi|327534053|gb|AEA92887.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis OG1RF]
gi|329577442|gb|EGG58891.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TX1467]
Length = 188
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y E +HNIGF+ +D I F A+I+E + + +L+K
Sbjct: 1 MKVIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++ ++ + E+ +VI+DDLDL+ G +RL+ G GHNG+KS+
Sbjct: 61 PLTFMNESGRSVGPLLTYFGVDE-EDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNF 150
G N + R++IGIGRP +I HVL F
Sbjct: 120 HLGTNVFPRIKIGIGRPSKNDTVIHHVLSTF 150
>gi|237713463|ref|ZP_04543944.1| peptidyl-tRNA hydrolase [Bacteroides sp. D1]
gi|229446445|gb|EEO52236.1| peptidyl-tRNA hydrolase [Bacteroides sp. D1]
Length = 195
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 10 YLVVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFMDGRYGFTTSFSIKGRQLILLKP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 70 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAI 128
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +NY RLR GIG + +VLG+F+ +
Sbjct: 129 LGTQNYARLRFGIGNDFPRGGQVDYVLGHFTDED 162
>gi|196250766|ref|ZP_03149453.1| Aminoacyl-tRNA hydrolase [Geobacillus sp. G11MC16]
gi|196209716|gb|EDY04488.1| Aminoacyl-tRNA hydrolase [Geobacillus sp. G11MC16]
Length = 186
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 95/163 (58%), Gaps = 2/163 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG EY + RHNIGF ID + KF + G + L K
Sbjct: 1 MKLFVGLGNPGKEYEQTRHNIGFFVIDELAKRWNVSLKTAKFRGLFGTASVFGEKVALCK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +++FY + +++ ++I+DDLDL G +RL+ GG GHNG+KSI
Sbjct: 61 PLTYMNLSGECVCPLIDFYDIA-VDDVIIIYDDLDLPPGKIRLRLKGGSGGHNGVKSIIH 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
G + +KR+RIGIGRP + + +VL F+ E+ ++ +
Sbjct: 120 HLGTEQFKRIRIGIGRPTNGQPVADYVLSRFTEEEKPVVMEAV 162
>gi|119390959|sp|Q1H3J3|PTH_METFK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 192
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 102/174 (58%), Gaps = 8/174 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEI--SEGQLDG-LRTILI 59
+ GLGNPG +Y + RHN GF ID++ + A K A+ G+L+G T L+
Sbjct: 6 LFVGLGNPGAQYEDTRHNAGFWWIDQLCAQ---TASKTTLEAKFFGLSGRLNGHADTWLL 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ + FYK+P E LV+HD+LDL G RLK GGG +GHNGLK I+
Sbjct: 63 KPTTFMNASGRAVAALARFYKIP-AEQILVVHDELDLPPGAARLKKGGGHSGHNGLKDIA 121
Query: 120 EKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ G N + RLR+GIG P D + ++ +VL E + +D+ LP L
Sbjct: 122 AQLGTNDFWRLRLGIGHPGDRSAVVNYVLNAPLRDEMQQIAYAMDDSMLVLPQL 175
>gi|116328182|ref|YP_797902.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330906|ref|YP_800624.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|122281341|sp|Q04TA4|PTH_LEPBJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|122284027|sp|Q051M6|PTH_LEPBL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116120926|gb|ABJ78969.1| Peptidyl -tRNA hydrolase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116124595|gb|ABJ75866.1| Peptidyl -tRNA hydrolase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 189
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 97/155 (62%), Gaps = 3/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ G+GNPG +Y NRHNIGF+ +D + + +++ ++ +G+ +KP
Sbjct: 6 LLLVGIGNPGPKYAYNRHNIGFVILDSLLNSSS-ASYQTNSKYSLARTDEEGVTIFYLKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMNLSG+++ E+ + + EN LVIHD++D +FG L+LK GGG AGHNGL++I EK
Sbjct: 65 LEFMNLSGKAVAEIAKKNGI-SPENILVIHDEIDFEFGKLKLKEGGGHAGHNGLRNIVEK 123
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G N + RLR G+G+P + + +VL NF E+
Sbjct: 124 LGTNTFFRLRFGVGKPSTASEVSDYVLSNFFPEEK 158
>gi|172036669|ref|YP_001803170.1| peptidyl-tRNA hydrolase [Cyanothece sp. ATCC 51142]
gi|171698123|gb|ACB51104.1| peptidyl-tRNA hydrolase [Cyanothece sp. ATCC 51142]
Length = 204
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 106/175 (60%), Gaps = 10/175 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTI-LI 59
++ GLGNP +Y + RHNIGF +D I + + +WK ++F I+EG + I L+
Sbjct: 14 LIVGLGNPEPKYDKTRHNIGFEIVD-ILAETWGLSWKENRRFQGLIAEGNSPTYQKIYLL 72
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SGQS+ V ++YKL + LVI+DD+DL G +R++ G GHNG+KSI
Sbjct: 73 KPLTYMNRSGQSVRAVTDWYKLI-ATDVLVIYDDMDLPIGRMRMRLSGSAGGHNGMKSII 131
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL---LP-IIDNIARSL 169
G +N+ RLRIGIG+ + + HVLG F+ ER + P ++D I SL
Sbjct: 132 SHLGEQNFPRLRIGIGKSGQLDNTVSHVLGRFAPEERKIVDKTFPLVVDAIETSL 186
>gi|153807758|ref|ZP_01960426.1| hypothetical protein BACCAC_02041 [Bacteroides caccae ATCC 43185]
gi|149129367|gb|EDM20581.1| hypothetical protein BACCAC_02041 [Bacteroides caccae ATCC 43185]
Length = 189
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 4 YLIVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFIDGRYGFTTSFSVKGRQLILLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 64 STFMNLSGFAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAST 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +NY RLR GIG I +VLG+F+ +
Sbjct: 123 LGTQNYARLRFGIGNDFPRGGQIDYVLGHFTDED 156
>gi|83320028|ref|YP_424097.1| peptidyl-tRNA hydrolase [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
gi|119390961|sp|Q2ST16|PTH_MYCCT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|83283914|gb|ABC01846.1| peptidyl-tRNA hydrolase [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 186
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 106/182 (58%), Gaps = 2/182 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY + RHN GF+ ID + + + + K++F++ + ++ + + +K
Sbjct: 1 MKVIIGLGNIGKEYEKTRHNAGFIAIDLLLEKYKYNSIKEEFNSLVYTSIINNQKVLFVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +++NFYK+ +L + +VIHDD DL+ ++ K G AGHNG+KSI
Sbjct: 61 PLTFMNNSGLTVKQIINFYKI-DLNDLIVIHDDKDLNISRIQFKKDGSSAGHNGIKSIIN 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ RLRIGI +P + I+ VL FS E L +N + + + +
Sbjct: 120 NLNTQDFYRLRIGINKPANQWKIVDWVLSKFSDDELNLLKESFNNKSEFINDFTNNKTFT 179
Query: 180 FL 181
+L
Sbjct: 180 YL 181
>gi|268318832|ref|YP_003292488.1| aminoacyl-tRNA aminoacylhydrolase [Lactobacillus johnsonii FI9785]
gi|262397207|emb|CAX66221.1| aminoacyl-tRNA aminoacylhydrolase [Lactobacillus johnsonii FI9785]
Length = 185
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 98/159 (61%), Gaps = 3/159 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y + +HN GFM +D + K KF ++ +++G I ++
Sbjct: 1 MKLIAGLGNPGRKYDQTKHNTGFMALDHYLEKNGLTLDKDKFEGLWTKQKINGEDVIFLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +V NF+K+ E+ LVIHDD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNDSGKSIAQVANFFKIK-PEDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G N+ RL+IGI R P ++ VL F++ ++ +
Sbjct: 120 CLGTNNFNRLKIGI-RHPKNESVVSWVLSPFNNDQQKLM 157
>gi|319789279|ref|YP_004150912.1| peptidyl-tRNA hydrolase [Thermovibrio ammonificans HB-1]
gi|317113781|gb|ADU96271.1| peptidyl-tRNA hydrolase [Thermovibrio ammonificans HB-1]
Length = 188
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 101/175 (57%), Gaps = 2/175 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+V GLGNPG EY + RHN+G+M +DR+ ++KF E + + + IL+KP
Sbjct: 4 LVVGLGNPGREYEKTRHNVGWMVLDRLADKLGVSLNREKFKGLYGEYRGENGKVILLKPL 63
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG+S+ + + ++K+ E +V++DDLDL G LRLK G GH G++SI +
Sbjct: 64 TYMNRSGESVSQFLRYFKIAP-EEMVVVYDDLDLPLGKLRLKPKGSSGGHRGVESIIREL 122
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G N+ RL++GIGRP ++ +VL F + + +D + L LL E
Sbjct: 123 GTSNFPRLKVGIGRPARKEEVVDYVLSPFGREQWPAIEEAVDRASDCLNLLISGE 177
>gi|300115102|ref|YP_003761677.1| peptidyl-tRNA hydrolase [Nitrosococcus watsonii C-113]
gi|299541039|gb|ADJ29356.1| peptidyl-tRNA hydrolase [Nitrosococcus watsonii C-113]
Length = 193
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 98/173 (56%), Gaps = 7/173 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTIL 58
+++ GLGNPG EY + RHN GF +D + S F P KF + + G L
Sbjct: 6 WLLIGLGNPGIEYAQTRHNAGFWWLDAVASELGIDFKPG--AKFFGDYARAHWRGHDLWL 63
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP TFMN SGQ++L ++N+Y++P LE L+ HDDLDL G +LK GG GHNGL+ I
Sbjct: 64 LKPTTFMNRSGQAVLALLNYYQIP-LERLLIAHDDLDLPPGIAKLKRTGGHGGHNGLRDI 122
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ G +++ RLR+G+G P ++ +VL S +R + I LP
Sbjct: 123 INRLGRRDFLRLRLGVGHPGSGQDVVSYVLNRPSREDRQAIETAIGAGFEVLP 175
>gi|167755582|ref|ZP_02427709.1| hypothetical protein CLORAM_01096 [Clostridium ramosum DSM 1402]
gi|237734332|ref|ZP_04564813.1| peptidyl-tRNA hydrolase [Mollicutes bacterium D7]
gi|167704521|gb|EDS19100.1| hypothetical protein CLORAM_01096 [Clostridium ramosum DSM 1402]
gi|229382562|gb|EEO32653.1| peptidyl-tRNA hydrolase [Coprobacillus sp. D7]
Length = 184
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 102/170 (60%), Gaps = 3/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GFM +D + + + KF ++ + G IL+K
Sbjct: 1 MKLIVGLGNPGKEYEGTRHNCGFMVVDELANKLNTEINQNKFKGLYTKVKYHGEDVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
PQT+MNLSG+S++ MNF+KL E+ +VI+DDLD+ G LRL+ G GHNG+K+ I+
Sbjct: 61 PQTYMNLSGESVIAAMNFFKLDK-EDIIVIYDDLDMPVGKLRLRKTGSAGGHNGIKNIIA 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+++KR+R+GI R ++ +VL F+ E + ID + ++
Sbjct: 120 HLSSQDFKRIRVGIDRHK-YMKVVDYVLSRFAKEETEAINQGIDKASDAV 168
>gi|313665035|ref|YP_004046906.1| aminoacyl-tRNA hydrolase [Mycoplasma leachii PG50]
gi|312949491|gb|ADR24087.1| aminoacyl-tRNA hydrolase [Mycoplasma leachii PG50]
Length = 186
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY + RHN GF+ ID + + + + K++F++ + ++ + + +K
Sbjct: 1 MKVIIGLGNIGKEYEKTRHNAGFIAIDLLLEKYKYNSVKEEFNSLVYTSIINNQKVLFVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +++NFYK+ +L + +VIHDD DL+ ++ K G AGHNG+KSI
Sbjct: 61 PLTFMNNSGLAVRQIINFYKI-DLNDLIVIHDDKDLNISRIQFKKDGSSAGHNGIKSIIN 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+++ RLR+GI +P + II VL FS E
Sbjct: 120 NLNTQDFYRLRVGINKPANQWKIIDWVLSKFSDDE 154
>gi|229546914|ref|ZP_04435639.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1322]
gi|255971756|ref|ZP_05422342.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T1]
gi|257421546|ref|ZP_05598536.1| peptidyl-tRNA hydrolase [Enterococcus faecalis X98]
gi|312952656|ref|ZP_07771520.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0102]
gi|229307842|gb|EEN73829.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1322]
gi|255962774|gb|EET95250.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T1]
gi|257163370|gb|EEU93330.1| peptidyl-tRNA hydrolase [Enterococcus faecalis X98]
gi|310629444|gb|EFQ12727.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0102]
gi|315147121|gb|EFT91137.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4244]
gi|315153560|gb|EFT97576.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0031]
gi|315156260|gb|EFU00277.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0043]
gi|315158595|gb|EFU02612.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0312]
gi|323479469|gb|ADX78908.1| peptidyl-tRNA hydrolase [Enterococcus faecalis 62]
Length = 188
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y E +HNIGF+ +D I F A+I+E + + +L+K
Sbjct: 1 MKVIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++ ++ + E+ +VI+DDLDL+ G +RL+ G GHNG+KS+
Sbjct: 61 PLTFMNESGRSVGPLLTYFGVDE-EDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNF 150
G N + R++IGIGRP +I HVL F
Sbjct: 120 HLGTNVFPRIKIGIGRPSKNDTVIHHVLSTF 150
>gi|167762595|ref|ZP_02434722.1| hypothetical protein BACSTE_00951 [Bacteroides stercoris ATCC
43183]
gi|167699701|gb|EDS16280.1| hypothetical protein BACSTE_00951 [Bacteroides stercoris ATCC
43183]
Length = 187
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 94/156 (60%), Gaps = 7/156 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH--FFPAWKKKFHAEISEGQLDGLRTILI 59
+++AGLGN G EY E RHNIGFM +D + F + F A +S + G + IL+
Sbjct: 3 YLIAGLGNIGPEYHETRHNIGFMVVDALAQAAGITFNDGRYGFTATMS---VKGRQLILL 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 60 KPSTFMNLSGNAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIA 118
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +NY RLR GIG + VLG+F+ +
Sbjct: 119 ATLGTQNYARLRFGIGNDFPRGGQVDFVLGHFTDED 154
>gi|56808861|ref|ZP_00366572.1| COG0193: Peptidyl-tRNA hydrolase [Streptococcus pyogenes M49 591]
gi|71902672|ref|YP_279475.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS6180]
gi|94987636|ref|YP_595737.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS9429]
gi|94989514|ref|YP_597614.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS10270]
gi|94991502|ref|YP_599601.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS2096]
gi|71801767|gb|AAX71120.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS6180]
gi|94541144|gb|ABF31193.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS9429]
gi|94543022|gb|ABF33070.1| Peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS10270]
gi|94545010|gb|ABF35057.1| Peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS2096]
Length = 204
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 103/177 (58%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HNIGFM ID I + K F A+I ++ + +KP
Sbjct: 19 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKP 78
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + ++ + +VI+DDLD++ LRL++ G GHNG+KSI
Sbjct: 79 TTFMNNSGIAVKALLTYYNI-DITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAH 137
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R+++GIGRP +I HV+G F++ + + +D + ++ + D
Sbjct: 138 IGTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQEND 194
>gi|50913351|ref|YP_059323.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS10394]
gi|94993401|ref|YP_601499.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS10750]
gi|50902425|gb|AAT86140.1| Peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS10394]
gi|94546909|gb|ABF36955.1| Peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS10750]
Length = 204
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 103/177 (58%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HNIGFM ID I + K F A+I ++ + +KP
Sbjct: 19 MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKP 78
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + ++ + +VI+DDLD++ LRL++ G GHNG+KSI
Sbjct: 79 TTFMNNSGIAVKALLTYYNI-DITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAH 137
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R+++GIGRP +I HV+G F++ + + +D + ++ + D
Sbjct: 138 IGTQEFNRIKVGIGRPLKGMTVISHVMGQFNTEDNIAISLTLDRVVNAVKFYLQEND 194
>gi|330823567|ref|YP_004386870.1| peptidyl-tRNA hydrolase [Alicycliphilus denitrificans K601]
gi|329308939|gb|AEB83354.1| Peptidyl-tRNA hydrolase [Alicycliphilus denitrificans K601]
Length = 209
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 95/166 (57%), Gaps = 6/166 (3%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTF 64
GLGNPG EY RHN GF ID + A ++ +H + + G L++PQTF
Sbjct: 7 GLGNPGPEYEATRHNAGFWWIDALARELKVVLAPERSYHGLAARANVAGHGVWLLQPQTF 66
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK 124
MNLSG+S+ + F+K+ E LV+HD+LDL G +LK GG AGHNGL+ I + G
Sbjct: 67 MNLSGKSVAALARFFKIAP-EEILVVHDELDLPPGQAKLKRGGSHAGHNGLRDIHAQLGT 125
Query: 125 -NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+Y RLR+GIG P A +I VL + +R I D+IA SL
Sbjct: 126 GDYWRLRLGIGHPGARAEVINWVLKKPAPDQRTL---IEDSIAHSL 168
>gi|225848301|ref|YP_002728464.1| peptidyl-tRNA hydrolase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643316|gb|ACN98366.1| peptidyl-tRNA hydrolase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 189
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+ GLGNPG +Y + RHN+GFM D + + +K+K + I E I+ KPQ
Sbjct: 5 IIGLGNPGQKYKDTRHNVGFMVADAVAKAIKCDNKYKEKDFSHIYE--CPDYDVIIAKPQ 62
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG ++L ++ Y L E LV+HDDLDL+ GT+RL+T G GHNGLKSI
Sbjct: 63 TYMNLSGNAVLNLLEDYNLKPSE-ILVVHDDLDLNLGTIRLRTKGSSGGHNGLKSIIGMI 121
Query: 123 -GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
+ + RL+IGIGRP + +VL F+ E++ L +I
Sbjct: 122 KTEEFPRLKIGIGRPARKEEVSDYVLSPFTKEEKFVLDKVI 162
>gi|254525968|ref|ZP_05138020.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9202]
gi|221537392|gb|EEE39845.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9202]
Length = 200
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 112/195 (57%), Gaps = 12/195 (6%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG ++ ++RHNIGF+ ++ + ++ +F +K K + SE Q+D L
Sbjct: 6 LIGLGNPGKKFLKSRHNIGFLLLEYFSKKYNSNFL--FKDKLKSSYSEFQIDNSSYRLFL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++++YK+ NL+ +I DD DL G +R + G GHNGLKSI E
Sbjct: 64 PNTFMNNSGYAVRAIVDWYKI-NLDQIFIIVDDKDLPLGKIRFRRKGSSGGHNGLKSIIE 122
Query: 121 KC-GKNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ +N+KR+RIGIG PP + I HVLGN S E+ L + + SL L
Sbjct: 123 QLQTQNFKRIRIGIGSPPPIKGEKNFNTISHVLGNISLEEKSILDKVFMRVIESLEKLNT 182
Query: 175 REDVSFLNHIVSVRK 189
+++ +N + S K
Sbjct: 183 KKEEYIINELNSFDK 197
>gi|124024149|ref|YP_001018456.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9303]
gi|166229434|sp|A2CCI1|PTH_PROM3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|123964435|gb|ABM79191.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9303]
Length = 206
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 12/179 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG +Y RHNIGFM +D++ S F P + KFH ++E + R L+
Sbjct: 8 LLVGLGNPGSKYVGTRHNIGFMALDKLAGQKSVSFRP--QTKFHGLMAEVGVGSERVRLL 65
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
PQT+MN SG+++ ++++ L ++ LV+ DD+DL G LRL+ G GHNGL+S
Sbjct: 66 MPQTYMNESGRAIRAAIDWFGL-EVDQLLVLVDDMDLPLGRLRLRAQGSAGGHNGLRSAI 124
Query: 120 EKCG-KNYKRLRIGIGRPPDT-----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ G +++ RLRIGIG P T A + HVLG FS E + ++D + L L+
Sbjct: 125 QHLGTQDFCRLRIGIGAPGCTSEERRARTVSHVLGVFSRQESLLVDQVLDEVLIGLDLI 183
>gi|138893725|ref|YP_001124178.1| peptidyl-tRNA hydrolase [Geobacillus thermodenitrificans NG80-2]
gi|166199333|sp|A4IJC9|PTH_GEOTN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|134265238|gb|ABO65433.1| Peptidyl-tRNA hydrolase [Geobacillus thermodenitrificans NG80-2]
Length = 186
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 92/156 (58%), Gaps = 2/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG EY + RHNIGF ID + KF + G + L K
Sbjct: 1 MKLFVGLGNPGKEYEQTRHNIGFFVIDELAKRWNVSLKTAKFRGLFGTASVFGEKVALCK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +++FY + +++ ++I+DDLDL G +RL+ GG GHNG+KSI
Sbjct: 61 PLTYMNLSGECVCPLIDFYDIA-VDDVIIIYDDLDLPPGKIRLRLKGGSGGHNGVKSIIH 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + +KR+RIGIGRP + + +VL F+ E+
Sbjct: 120 HLGTEQFKRIRIGIGRPTNGQPVADYVLSRFTEEEK 155
>gi|126695611|ref|YP_001090497.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9301]
gi|166229432|sp|A3PAX1|PTH_PROM0 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|126542654|gb|ABO16896.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9301]
Length = 198
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 109/190 (57%), Gaps = 8/190 (4%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+ GLGNPG +Y +RHNIGF+ ++++ ++ K K + SE Q++ L P
Sbjct: 6 LIGLGNPGKKYYNSRHNIGFLLLEKLSKKYNSNFLLKDKLKSSCSEFQINNYTFRLFLPN 65
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMN SG ++ ++++YK+ NL+ +I DD DL G +R + G GHNGLKSI E+
Sbjct: 66 TFMNNSGYAVRAIVDWYKV-NLDQIFIIVDDKDLPLGKIRFRRKGSSGGHNGLKSIIEQL 124
Query: 123 -GKNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
+N+KR+RIGIG PP + + I HVLGN S E+ L + + SL L ++
Sbjct: 125 QSQNFKRIRIGIGSPPLIKGENNFNTISHVLGNISLEEKLILDKVFKRVIESLEHLNTKK 184
Query: 177 DVSFLNHIVS 186
+ +N + S
Sbjct: 185 EDHIINELNS 194
>gi|296272452|ref|YP_003655083.1| peptidyl-tRNA hydrolase [Arcobacter nitrofigilis DSM 7299]
gi|296096626|gb|ADG92576.1| peptidyl-tRNA hydrolase [Arcobacter nitrofigilis DSM 7299]
Length = 183
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 106/173 (61%), Gaps = 6/173 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
MF++ GLGNPG +Y NRHN+GF+ ID I + K F+A++ L +L+
Sbjct: 1 MFLIVGLGNPGTKYENNRHNVGFLVIDAIAKNLTTSNINKSNFNADV----LKTSNQLLV 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG ++ + +YKL NLE+ +VIHDDLDL FGT++ K GGG GHNGL+SI
Sbjct: 57 KPTTYMNNSGLAVHAIKEYYKL-NLEDIIVIHDDLDLPFGTVKFKIGGGHGGHNGLRSID 115
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G Y R+RIGIG+P ++ +VL +FS E L II + ++ L
Sbjct: 116 SHVGNMYIRVRIGIGKPESKNNVANYVLSDFSKEELNKLEGIISHTINAIESL 168
>gi|281412601|ref|YP_003346680.1| peptidyl-tRNA hydrolase [Thermotoga naphthophila RKU-10]
gi|281373704|gb|ADA67266.1| peptidyl-tRNA hydrolase [Thermotoga naphthophila RKU-10]
Length = 186
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 102/172 (59%), Gaps = 6/172 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG Y RHN+GF+ +D + + WK + + S +L G L+KP
Sbjct: 1 MVVVGLGNPGPRYAFTRHNVGFLFLDFLKN----KDWKTEKYFAWSRIKLAGNDVALVKP 56
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ V+ F+ +L++ +V++DD+ L G +R++ G D GHNG+KSI ++
Sbjct: 57 LTYMNLSGLAMPHVLKFFN-ASLDDIIVVYDDVSLKLGKIRIRKKGSDGGHNGMKSIIQE 115
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + KR+R+GIG P+ ++ VLG FS E L + + + +L ++
Sbjct: 116 LGTQEIKRIRVGIGDKPEGMDLVDFVLGEFSDGEWVILNKVFEMMKEALEVI 167
>gi|240169902|ref|ZP_04748561.1| peptidyl-tRNA hydrolase [Mycobacterium kansasii ATCC 12478]
Length = 193
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 107/174 (61%), Gaps = 5/174 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILI 59
F+V GLGNPG Y RHN+GFM D + + +K K+ AE+ G+L G +L
Sbjct: 5 FLVVGLGNPGDTYARTRHNLGFMVADLLAA-RLGSKFKGHKRSGAEVVTGRLAGRAVVLA 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+ +MN SG+ + + FY + + +VIHDDLDLDFG +RLK GGG+ GHNGL+S++
Sbjct: 64 KPRCYMNESGRQVGPLATFYSVAP-ADIVVIHDDLDLDFGRIRLKLGGGEGGHNGLRSVA 122
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K+++R+RIGIGRPP VL NF++ ER + I + A + LL
Sbjct: 123 AALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTTAERAEVPTICEQAADATELL 176
>gi|315037510|ref|YP_004031078.1| peptidyl-tRNA hydrolase [Lactobacillus amylovorus GRL 1112]
gi|325955974|ref|YP_004286584.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus 30SC]
gi|312275643|gb|ADQ58283.1| peptidyl-tRNA hydrolase [Lactobacillus amylovorus GRL 1112]
gi|325332539|gb|ADZ06447.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus 30SC]
gi|327182806|gb|AEA31253.1| peptidyl-tRNA hydrolase [Lactobacillus amylovorus GRL 1118]
Length = 185
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 104/182 (57%), Gaps = 3/182 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y + +HN GFM +D K KF ++ +++G IL++
Sbjct: 1 MKIIAGLGNPGQKYDKTKHNTGFMTMDHYLDEKGLSLDKDKFEGLWTKQKINGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ +V NF+K+ + E+ L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNESGRSVSQVANFFKV-DPEDILIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + RL+IGI R P A ++ VL F+ ++ + D + + D
Sbjct: 120 DLGTEKFNRLKIGI-RHPKNATVVSWVLTPFNDEQQKLMDDAFDTSVKIIDDFIAGRDSQ 178
Query: 180 FL 181
+L
Sbjct: 179 YL 180
>gi|222110036|ref|YP_002552300.1| peptidyl-tRNA hydrolase [Acidovorax ebreus TPSY]
gi|254783866|sp|B9ME46|PTH_DIAST RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|221729480|gb|ACM32300.1| peptidyl-tRNA hydrolase [Acidovorax ebreus TPSY]
Length = 211
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 6 GLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
GLGNPG EY RHN GF ID R P ++ +H ++ + G L++PQ
Sbjct: 7 GLGNPGPEYEATRHNAGFWWIDALARELKVTLVP--ERSYHGLVARASVAGHSVWLLQPQ 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S+ + F+K+P E LV HD+LD+ G +LK GG AGHNGL+ I +
Sbjct: 65 TFMNLSGKSVAALARFFKIPP-EEILVAHDELDIPPGQAKLKRGGSHAGHNGLRDIHAQL 123
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +Y RLRIGIG P A ++ VL + +R I D+I SL
Sbjct: 124 GTSDYWRLRIGIGHPGVKAEVVNWVLKKPAPDQRTL---IEDSILHSL 168
>gi|153003000|ref|YP_001377325.1| peptidyl-tRNA hydrolase [Anaeromyxobacter sp. Fw109-5]
gi|166199301|sp|A7H6J5|PTH_ANADF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|152026573|gb|ABS24341.1| Aminoacyl-tRNA hydrolase [Anaeromyxobacter sp. Fw109-5]
Length = 192
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 102/155 (65%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY RHN+GF+ DR+ +KF +E++EG+ G R ++K
Sbjct: 1 MKLVVGLGNPGPEYARTRHNVGFLVADRLALALRAEFTLRKFASELAEGRAGGERVWIMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++F+KL LE+ +V+HDDL+L+ ++LK GGG GHNGLKS++
Sbjct: 61 PQTYMNHSGESVGSALHFWKL-GLEDLVVVHDDLELEPFRVQLKVGGGHGGHNGLKSVNA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +Y R+R+G+GRPP +VLG F+ +
Sbjct: 120 HVGGPDYARVRVGVGRPPPRMDPADYVLGRFAKAD 154
>gi|26553598|ref|NP_757532.1| peptidyl-tRNA hydrolase [Mycoplasma penetrans HF-2]
gi|46576820|sp|Q8EWQ8|PTH_MYCPE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|26453604|dbj|BAC43936.1| peptidyl-tRNA hydrolase [Mycoplasma penetrans HF-2]
Length = 187
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 102/184 (55%), Gaps = 12/184 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG EY + +HN+GFMCID + H KF+ + + + + KP
Sbjct: 4 YLVVGLGNPGLEYEKTKHNVGFMCIDELLKEHTLFLNNSKFNGQFVKVDQPEDQIFIAKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+ + E+ FYK+ +N LVI+DD+D D G +R+K G G NG+KSI K
Sbjct: 64 MTYMNNSGEFVYEICKFYKIHE-QNILVIYDDIDTDVGKIRVKAKGSSGGQNGIKSIISK 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ KR+RIGIG+P ++ HVL FS+ + + I + AK F
Sbjct: 123 MNTEKIKRIRIGIGKP--VHNLTHHVLTKFSAEDSIKVQQAI--------IKAKDACNEF 172
Query: 181 LNHI 184
LNH+
Sbjct: 173 LNHV 176
>gi|293388110|ref|ZP_06632637.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis S613]
gi|291082486|gb|EFE19449.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis S613]
Length = 188
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y E +HNIGF+ +D I F A+I+E + + +L+K
Sbjct: 1 MKVIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++ ++ + E+ +VI+DDLDL+ G +RL+ G GHNG+KS+
Sbjct: 61 PLTFMNESGRSVGPLLTYFG-ADEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNF 150
G N + R++IGIGRP +I HVL F
Sbjct: 120 HLGTNVFPRIKIGIGRPSKNDTVIHHVLSTF 150
>gi|329955543|ref|ZP_08296451.1| aminoacyl-tRNA hydrolase [Bacteroides clarus YIT 12056]
gi|328525946|gb|EGF52970.1| aminoacyl-tRNA hydrolase [Bacteroides clarus YIT 12056]
Length = 187
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 94/156 (60%), Gaps = 7/156 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH--SFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+++ GLGN G EY E RHNIGFM +D + + F + F A IS + G + +L+
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMAVDALAKTAGATFNDGRYGFTATIS---VKGRQLVLL 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 60 KPSTFMNLSGNAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIA 118
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +NY RLR GIG I VLG+F+ +
Sbjct: 119 ATLGTQNYARLRFGIGNDFPRGGQIDFVLGHFTDED 154
>gi|42518363|ref|NP_964293.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii NCC 533]
gi|68052979|sp|Q74LA8|PTH_LACJO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|41582648|gb|AAS08259.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii NCC 533]
Length = 185
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 105/182 (57%), Gaps = 3/182 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM +D + K KF ++ +++G I ++
Sbjct: 1 MKLITGLGNPGRKYDQTKHNTGFMALDHYLEKNGLTLDKNKFEGLWTKQKINGEDVIFLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +V NF+K+ E+ LVIHDD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNDSGKSIAQVANFFKIK-PEDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RL+IGI R P+ ++ VL F++ ++ + + + K ++
Sbjct: 120 CLGTNNFNRLKIGI-RHPENESVVSWVLSPFNNDQQKLMDAAFETSENVINDFIKGKNAQ 178
Query: 180 FL 181
+L
Sbjct: 179 YL 180
>gi|256960621|ref|ZP_05564792.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Merz96]
gi|293382708|ref|ZP_06628633.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis R712]
gi|312908604|ref|ZP_07767546.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 512]
gi|312909248|ref|ZP_07768105.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 516]
gi|256951117|gb|EEU67749.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Merz96]
gi|291079868|gb|EFE17232.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis R712]
gi|310625391|gb|EFQ08674.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 512]
gi|311290490|gb|EFQ69046.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 516]
Length = 188
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y E +HNIGF+ +D I F A+I+E + + +L+K
Sbjct: 1 MKVIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++ ++ + E+ +VI+DDLDL+ G +RL+ G GHNG+KS+
Sbjct: 61 PLTFMNESGRSVGPLLTYFG-ADEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNF 150
G N + R++IGIGRP +I HVL F
Sbjct: 120 HLGTNVFPRIKIGIGRPSKNDTVIHHVLSTF 150
>gi|300858119|ref|YP_003783102.1| peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis FRC41]
gi|300685573|gb|ADK28495.1| Peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis FRC41]
gi|308276075|gb|ADO25974.1| Peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis I19]
Length = 186
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 6/158 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPA---WKKKFHAEISEGQLDGLRTI 57
F++ GLGNPG +Y RHN+G+M ID + + PA KK + +E ++ + I
Sbjct: 5 FLIVGLGNPGPQYATTRHNVGYMAIDELLTRASPMPARLSAHKKTNMMAAETRIGNTKVI 64
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L P+ FMNLSG + + NF+ +P +V+ DDL+L+F ++ K GGGD GHNGL+S
Sbjct: 65 LATPRCFMNLSGGPVRSIANFFNIPP-SRVIVLFDDLELNFSEVKAKIGGGDHGHNGLRS 123
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+++ G K+Y R+ IGIGRPP VL FS E
Sbjct: 124 VTQSLGTKDYFRVGIGIGRPPGRMEPKTFVLKPFSKKE 161
>gi|78224042|ref|YP_385789.1| peptidyl-tRNA hydrolase [Geobacter metallireducens GS-15]
gi|119390945|sp|Q39RR0|PTH_GEOMG RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78195297|gb|ABB33064.1| peptidyl-tRNA hydrolase [Geobacter metallireducens GS-15]
Length = 194
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 102/166 (61%), Gaps = 7/166 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y RHN GFM +D + KK F EG G R +L+KPQ
Sbjct: 5 LIIGLGNPGPKYQWTRHNAGFMVLDHLSRVMGTSVAKKSFSGLYGEGSWHGDRLLLLKPQ 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-SEK 121
TFMNLSG+S E + F+KL L + +VIHDDLD+ FG ++LK GGG GHNGL+S+ E
Sbjct: 65 TFMNLSGRSAAEALRFHKL-TLSDLIVIHDDLDIPFGRVKLKEGGGHGGHNGLRSLMQEL 123
Query: 122 CGKNYKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
G + R+RIG+GRP D A +VL NFSS E L ++D +
Sbjct: 124 GGGGFVRIRIGVGRPLRGDAAD---YVLANFSSAEMAGLPALLDGV 166
>gi|319441658|ref|ZP_07990814.1| peptidyl-tRNA hydrolase [Corynebacterium variabile DSM 44702]
Length = 223
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 108/192 (56%), Gaps = 13/192 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-----FPAWKKKFHAEISEGQLDGLR 55
++V GLGNPG +Y RHNIG+ +D + H P A+++ +D
Sbjct: 34 QWMVVGLGNPGAKYAATRHNIGYRVVDELLRRHREQLIGVPG----VTAKVARTGVDEHG 89
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L++ T+MN +G ++ + Y +P ++ + IHD+LDL G ++++ GG + GHNGL
Sbjct: 90 VLLVRSATYMNETGLAVAPLATSYAIP-ADHVIAIHDELDLPAGKVKIRIGGNENGHNGL 148
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLG--NFSSPERYFLLPIIDNIARSLPLL 172
KSISEK G ++Y R+R+GIGRP D ++ HVLG S R L + A ++ ++
Sbjct: 149 KSISEKLGTRDYVRIRVGIGRPSDGQSVVDHVLGRPGDGSLARELLEDAVRTAADAVEII 208
Query: 173 AKREDVSFLNHI 184
A+R + N I
Sbjct: 209 ARRGVPAAQNEI 220
>gi|121593315|ref|YP_985211.1| peptidyl-tRNA hydrolase [Acidovorax sp. JS42]
gi|166199298|sp|A1W4G0|PTH_ACISJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|120605395|gb|ABM41135.1| peptidyl-tRNA hydrolase [Acidovorax sp. JS42]
Length = 211
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 6 GLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
GLGNPG EY RHN GF ID R P ++ +H ++ + G L++PQ
Sbjct: 7 GLGNPGPEYEATRHNAGFWWIDALARELKVTLVP--ERSYHGLVARASVAGHSVWLLQPQ 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S+ + F+K+P E LV HD+LD+ G +LK GG AGHNGL+ I +
Sbjct: 65 TFMNLSGKSVAALARFFKIPP-EEILVAHDELDIPPGQAKLKRGGSHAGHNGLRDIHAQL 123
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +Y RLRIGIG P A ++ VL + +R I D+I SL
Sbjct: 124 GTSDYWRLRIGIGHPGVKAEVVNWVLKKPAPDQRTL---IEDSILHSL 168
>gi|331703857|ref|YP_004400544.1| peptidyl tRNA hydrolase [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|328802412|emb|CBW54567.1| Peptidyl tRNA hydrolase [Mycoplasma mycoides subsp. capri LC str.
95010]
Length = 186
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY + RHN GF+ ID + + + K++F++ I ++ + +L+K
Sbjct: 1 MKVIIGLGNIGKEYEKTRHNAGFIAIDLLLEKCNYSSVKQEFNSLIYTTMINNQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +++NFYK+ +L + ++IHDD DL+ ++ K G AGHNG+KSI
Sbjct: 61 PLTFMNNSGIAVRQIINFYKI-DLNDLIIIHDDKDLNISRIQFKKDGSSAGHNGIKSIIN 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+N+ RLRIG+ + P I+ VL FS E
Sbjct: 120 NLQTQNFYRLRIGVNQVPKEWKIVDWVLSKFSDEE 154
>gi|302757433|ref|XP_002962140.1| hypothetical protein SELMODRAFT_71323 [Selaginella moellendorffii]
gi|300170799|gb|EFJ37400.1| hypothetical protein SELMODRAFT_71323 [Selaginella moellendorffii]
Length = 177
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 95/156 (60%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG ++ RHN+GF ID + + A + +G ++G+ +L+KP
Sbjct: 1 WMIVGLGNPGSKFVGTRHNVGFEAIDLLALQENIKLNTIQCKALVGKGMIEGVPVLLVKP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QT+MNLSG ++ + +Y++ +N LVIHDD++LD +++ GG GHNG+++I E
Sbjct: 61 QTYMNLSGDAVSPLALYYRV-KPDNILVIHDDMNLDVAAMKMVPKGGPGGHNGMRNIIER 119
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K KN RLRIGIGRPP +VL F+ E+
Sbjct: 120 FKDNKNIPRLRIGIGRPPGAMDPKAYVLQKFTQREK 155
>gi|319761696|ref|YP_004125633.1| peptidyl-tRNA hydrolase [Alicycliphilus denitrificans BC]
gi|317116257|gb|ADU98745.1| peptidyl-tRNA hydrolase [Alicycliphilus denitrificans BC]
Length = 209
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 95/166 (57%), Gaps = 6/166 (3%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTF 64
GLGNPG EY RHN GF ID + A ++ +H + + G L++PQTF
Sbjct: 7 GLGNPGPEYEATRHNAGFWWIDALARELKVVLAPERSYHGLAARANVAGHGVWLLQPQTF 66
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK 124
MNLSG+S+ + F+K+ E LV+HD+LDL G +LK GG AGHNGL+ I + G
Sbjct: 67 MNLSGKSVAALARFFKIAP-EEILVVHDELDLPPGQAKLKHGGSHAGHNGLRDIHAQLGT 125
Query: 125 -NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+Y RLR+GIG P A +I VL + +R I D+IA SL
Sbjct: 126 GDYWRLRLGIGHPGARAEVINWVLKKPAPDQRTL---IEDSIAHSL 168
>gi|297587542|ref|ZP_06946186.1| aminoacyl-tRNA hydrolase [Finegoldia magna ATCC 53516]
gi|297574231|gb|EFH92951.1| aminoacyl-tRNA hydrolase [Finegoldia magna ATCC 53516]
Length = 190
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y RHN GFM ID + K KF + I EG + + IL+K
Sbjct: 1 MYLIAGLGNPGSKYEYTRHNAGFMVIDDLAKKLNIKVNKLKFKSLIGEGFIGNEKVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++L+ N+Y L EN +VI DD+D+ FGT+R+K G HNGLKSI
Sbjct: 61 PSTYMNDSGKAILDCFNYYNLS-AENLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+++ R+++ +G+ + + VL FS E L ID
Sbjct: 120 LIQSQDFARIKVSVGQNDNNYDLKDFVLSQFSKKEFEVLKKEID 163
>gi|224026158|ref|ZP_03644524.1| hypothetical protein BACCOPRO_02914 [Bacteroides coprophilus DSM
18228]
gi|224019394|gb|EEF77392.1| hypothetical protein BACCOPRO_02914 [Bacteroides coprophilus DSM
18228]
Length = 187
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 99/177 (55%), Gaps = 12/177 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGFM +D + ++ A S + G + +L+KP
Sbjct: 3 YLIVGLGNIGEEYRNTRHNIGFMVLDALAKASNIVFTDGRYGATASM-SVKGRQLLLLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M K+P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STYMNLSGNAVRYWMQQEKIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSS------PERYFLLPIIDNIARSLPL 171
G +NY RLR GIG I VLG+FS PER L + I +S L
Sbjct: 121 LGTQNYARLRFGIGNDFPRGGQIDFVLGHFSEEDTRLMPER---LEMAGEIVKSFCL 174
>gi|62389829|ref|YP_225231.1| peptidyl-tRNA hydrolase [Corynebacterium glutamicum ATCC 13032]
gi|24418600|sp|Q8NRV3|PTH1_CORGL RecName: Full=Peptidyl-tRNA hydrolase 1; Short=PTH 1
gi|21323704|dbj|BAB98331.1| Peptidyl-tRNA hydrolase [Corynebacterium glutamicum ATCC 13032]
gi|41325164|emb|CAF19645.1| PROBABLE PEPTIDYL-TRNA HYDROLASE PROTEIN [Corynebacterium
glutamicum ATCC 13032]
Length = 177
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 99/155 (63%), Gaps = 7/155 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y RHNIGF + + S F + K+ + +I+ QL GL I+ K
Sbjct: 6 LLVVGLGNPGPKYVGTRHNIGFEVAEELVSRSFGSFSVHKRSNTDIA--QLPGL--IVAK 61
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG + + +F+K+ + N +V+HD+L+LDFG+++L+ GGGD GHNGLKS S+
Sbjct: 62 PRSFMNLSGTPIRALCDFFKI-SPANVIVVHDELELDFGSVKLRQGGGDHGHNGLKSTSK 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G K+Y +L +GIGRPP VL F E
Sbjct: 121 SLGTKDYWKLSMGIGRPPGRMDPASFVLKPFGKQE 155
>gi|115378676|ref|ZP_01465826.1| peptidyl-tRNA hydrolase [Stigmatella aurantiaca DW4/3-1]
gi|310823077|ref|YP_003955435.1| peptidyl-tRNA hydrolase [Stigmatella aurantiaca DW4/3-1]
gi|115364342|gb|EAU63427.1| peptidyl-tRNA hydrolase [Stigmatella aurantiaca DW4/3-1]
gi|309396149|gb|ADO73608.1| Peptidyl-tRNA hydrolase [Stigmatella aurantiaca DW4/3-1]
Length = 191
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 106/166 (63%), Gaps = 5/166 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY +RHNIGFM ++ + S ++KF A + +G + G R + ++
Sbjct: 1 MKLICGLGNPGREYERHRHNIGFMVVEALLSRARAELNQEKFQARVGQGSVGGERVLFLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+SL + FYK+ +E+ LVIHD+LDL FG L+LK GGG GHNGLKS +
Sbjct: 61 PQTYMNLSGRSLADAARFYKIA-VEDILVIHDELDLPFGRLQLKAGGGTGGHNGLKSSVQ 119
Query: 121 KCGKN-YKRLRIGIGRP--PDTAH-IIRHVLGNFSSPERYFLLPII 162
G + + RLR GIG+P P+ + +VL +F ER L I
Sbjct: 120 CLGADGFIRLRFGIGKPEGPNAKERVAGYVLSSFDDGERRQLEEFI 165
>gi|118603028|ref|YP_904243.1| peptidyl-tRNA hydrolase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|166229448|sp|A1AXW5|PTH_RUTMC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118567967|gb|ABL02772.1| peptidyl-tRNA hydrolase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 191
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 101/172 (58%), Gaps = 6/172 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGF-MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y NRHN GF +C H + + KF E+++ + G + L+KP
Sbjct: 5 LIVGLGNPGKDYQSNRHNAGFWLCEALAHLYAGNFKKETKFFGEVAQINISGRKVRLLKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMN SGQS+ ++NFY++ N L++HD+LD+D G ++K GG GHNGL+ +
Sbjct: 65 TVFMNCSGQSIQSIVNFYQI-NTNEILIVHDELDIDPGIAKIKFDGGHGGHNGLRDTIQT 123
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K + RLRIGIG P D + + VL +P + L I +++ SL ++
Sbjct: 124 LGTKAFHRLRIGIGHPGDKSQVTNFVL---HAPSKGELEKIQNSLNNSLQII 172
>gi|288554662|ref|YP_003426597.1| peptidyl-tRNA hydrolase [Bacillus pseudofirmus OF4]
gi|288545822|gb|ADC49705.1| peptidyl-tRNA hydrolase [Bacillus pseudofirmus OF4]
Length = 185
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 106/184 (57%), Gaps = 2/184 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHNIGF ID + KF ++G + +K
Sbjct: 1 MKVVVGLGNPGAKYAGTRHNIGFDIIDYCAKELGVELDQAKFKGVYGTKVINGEKVFFLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +++++ + ++E+ +VI+DDLDL G +RL+ G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGESVRPLLDYFNI-DIEDLVVIYDDLDLPAGKIRLRQKGSAGGHNGIKSLIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + +KR+R+GI RP + I+ +VLG + ER + I A+++ ++ +
Sbjct: 120 HLGTDKFKRIRVGIDRPKNGEPIVNYVLGTYHPDEREAVNESIVQAAKAVEAWTEKPFLE 179
Query: 180 FLNH 183
+N
Sbjct: 180 VMNQ 183
>gi|305682090|ref|ZP_07404894.1| putative peptidyl-tRNA hydrolase [Corynebacterium matruchotii ATCC
14266]
gi|305658563|gb|EFM48066.1| putative peptidyl-tRNA hydrolase [Corynebacterium matruchotii ATCC
14266]
Length = 173
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 97/162 (59%), Gaps = 6/162 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHN G M + + A++++ A ++E L R +
Sbjct: 1 MFLIVGLGNPGAKYERTRHNSGVMALTELAGAV---AFRRRGSALVTESWLADHRVVFAI 57
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ FMN+SG + EV F+K+P + +V+ DDL+L+FGT+RL G D GHNGL+SI++
Sbjct: 58 PQRFMNVSGGPVKEVAGFFKIPP-QRTIVLFDDLELEFGTIRLPVLG-DHGHNGLRSITK 115
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
G +Y R +GIGRPP + VL F+ ER LPI+
Sbjct: 116 VFGADYVRAGLGIGRPPGRMPVADFVLKPFTKAERP-QLPIM 156
>gi|19552164|ref|NP_600166.1| peptidyl-tRNA hydrolase [Corynebacterium glutamicum ATCC 13032]
Length = 180
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 99/155 (63%), Gaps = 7/155 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y RHNIGF + + S F + K+ + +I+ QL GL I+ K
Sbjct: 9 LLVVGLGNPGPKYVGTRHNIGFEVAEELVSRSFGSFSVHKRSNTDIA--QLPGL--IVAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG + + +F+K+ + N +V+HD+L+LDFG+++L+ GGGD GHNGLKS S+
Sbjct: 65 PRSFMNLSGTPIRALCDFFKI-SPANVIVVHDELELDFGSVKLRQGGGDHGHNGLKSTSK 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G K+Y +L +GIGRPP VL F E
Sbjct: 124 SLGTKDYWKLSMGIGRPPGRMDPASFVLKPFGKQE 158
>gi|329117398|ref|ZP_08246115.1| aminoacyl-tRNA hydrolase [Streptococcus parauberis NCFD 2020]
gi|326907803|gb|EGE54717.1| aminoacyl-tRNA hydrolase [Streptococcus parauberis NCFD 2020]
Length = 189
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 100/177 (56%), Gaps = 3/177 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGN G +Y +HN+GFM IDRI + + K F A I L+ + +KP
Sbjct: 4 MIVGLGNIGSKYDMTKHNVGFMAIDRIVKDLNINFSEDKNFKALIGSSFLNQEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + +++ +VI+DDLD++ G +R + G GHNG+KSI
Sbjct: 64 TTFMNNSGIAVKALLTYYNIA-IDDLIVIYDDLDMEVGKIRFRQRGSAGGHNGIKSIIAH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R++IGIGRP + +I HVLG F + + +D + ++ K D
Sbjct: 123 IGSQEFDRIKIGIGRPQNGMTVINHVLGKFDKDDAITIDLTLDKVTDAVDFYLKEAD 179
>gi|195977162|ref|YP_002122406.1| peptidyl-tRNA hydrolase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|238689842|sp|B4U5H3|PTH_STREM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|195973867|gb|ACG61393.1| peptidyl-tRNA hydrolase Pth [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 189
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 98/169 (57%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HN+GFM +DR + K F A + ++ + +KP
Sbjct: 4 MIVGLGNPGSKYQQTKHNVGFMAVDRLVKDLDISFTEDKAFKALVGSAFINQEKIYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + ++ +VI+DDLD+ G +RL+ G GHNG+KSI
Sbjct: 64 TTFMNNSGLAVRALLTYYNIST-KDLMVIYDDLDMAVGKIRLRQKGSAGGHNGIKSIIAH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R++IGIGRP +I HVLG F + + + +D + +++
Sbjct: 123 IGTQEFDRVKIGIGRPSHGMSVINHVLGKFDTDDMITINIALDKVDKAI 171
>gi|87306412|ref|ZP_01088559.1| peptidyl-tRNA hydrolase [Blastopirellula marina DSM 3645]
gi|87290591|gb|EAQ82478.1| peptidyl-tRNA hydrolase [Blastopirellula marina DSM 3645]
Length = 184
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 97/170 (57%), Gaps = 3/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHN+GF +DR + + KF+ I E + +TIL+
Sbjct: 1 MKLVVGLGNPGPKYDKTRHNVGFEALDRFAAGSGVTP-RAKFNGNILELGVGEEKTILLY 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG S+ ++F+KLP+ E+ LV+ DD +L GTLR ++GG G GL I
Sbjct: 60 PHTFMNNSGTSVRAALDFFKLPS-ESVLVVCDDFNLPVGTLRFRSGGSAGGQKGLADILR 118
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
K G N RLRIGIG P + + VLG F+ ER + +D R +
Sbjct: 119 KVGTNDVPRLRIGIGPLPQSRDVTSFVLGKFAPQERAEIDFTLDRAIRGV 168
>gi|312869844|ref|ZP_07729985.1| aminoacyl-tRNA hydrolase [Lactobacillus oris PB013-T2-3]
gi|311094623|gb|EFQ52926.1| aminoacyl-tRNA hydrolase [Lactobacillus oris PB013-T2-3]
Length = 186
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 108/183 (59%), Gaps = 4/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM +D++ + A+ K A + G ++G + +L+
Sbjct: 1 MKMIVGLGNIGSRYDETRHNTGFMVVDQLARDYQLGAFSHLKQEAVAASGIINGEKVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ ++++Y L +L + +V++DDLD+ G +RLKT G GHNGLKSI
Sbjct: 61 KPTTFMNDSGRAVGPLVDYYGL-DLADLVVVNDDLDMPVGRVRLKTHGASGGHNGLKSII 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G K++ R+++GI P ++ HVLG F+ ER ++ +L K ED
Sbjct: 120 NALGTKDFNRVKLGIDHPQ-HGTVVSHVLGKFTPEERPRFDDAVERAEHALEDWIKGEDF 178
Query: 179 SFL 181
+ L
Sbjct: 179 AQL 181
>gi|331694718|ref|YP_004330957.1| peptidyl-tRNA hydrolase [Pseudonocardia dioxanivorans CB1190]
gi|326949407|gb|AEA23104.1| Peptidyl-tRNA hydrolase [Pseudonocardia dioxanivorans CB1190]
Length = 193
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 102/155 (65%), Gaps = 3/155 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
+V GLGNPG EY E RHN+GF ++ + + + K K +A++ EG+L G + +L KP
Sbjct: 6 LVVGLGNPGPEYAETRHNVGFRVVELLAARAGGGRFSKHKSNADVLEGRLAGRKVVLAKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+T+MN+SG + ++ ++ +P E +V+HDDLDL FG +RLK GGG+ GHNGL+SIS
Sbjct: 66 RTYMNVSGGPVAGLLRYFSVPAAE-LVVVHDDLDLGFGVIRLKQGGGEGGHNGLRSISSS 124
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G ++Y R+R GIGRPP VL FS+ ER
Sbjct: 125 VGTRDYLRVRFGIGRPPGRQDPADFVLKRFSAVER 159
>gi|307823426|ref|ZP_07653655.1| peptidyl-tRNA hydrolase [Methylobacter tundripaludum SV96]
gi|307735411|gb|EFO06259.1| peptidyl-tRNA hydrolase [Methylobacter tundripaludum SV96]
Length = 189
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 104/187 (55%), Gaps = 5/187 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW--KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN GF+ +DR+ S W + +F ++E G + +L+K
Sbjct: 4 LIVGLGNPGRQYEKTRHNAGFLFLDRLVSDSNCD-WVRESRFDGLLAEIGGAGGKVLLLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ + +V +YKL + LV+HD+LD D G ++LK GG AGHNGL+ I
Sbjct: 63 PGTFMNRSGQVVGKVARYYKLAP-DEILVVHDELDFDVGVVKLKKDGGHAGHNGLRDIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K + RLRIGIGRPP + VL S E + D A + + + +
Sbjct: 122 HLGAKEFYRLRIGIGRPPAGEAVADFVLSGPSKSEWILMSSAFDLAASYVDQVITGDMAA 181
Query: 180 FLNHIVS 186
+N + S
Sbjct: 182 VMNKLNS 188
>gi|237747306|ref|ZP_04577786.1| peptidyl-tRNA hydrolase [Oxalobacter formigenes HOxBLS]
gi|229378657|gb|EEO28748.1| peptidyl-tRNA hydrolase [Oxalobacter formigenes HOxBLS]
Length = 195
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 111/195 (56%), Gaps = 13/195 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D + + W+K KF A +++ +++G L+K
Sbjct: 5 LIVGLGNPGAEYEQTRHNAGFWFVDNLENGSSGVRWQKESKFSALVAKTKINGADVWLMK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG ++ + F+K+ + E LV+HD+LD+ G +LK G GHNGLK I+
Sbjct: 65 PQTFMNRSGLAVGAIARFFKIASDE-ILVVHDELDILPGNAKLKRSGSTGGHNGLKDIAA 123
Query: 121 KCG-KNYKRLRIGIGRPPDT---AHIIRHVLGNFSSPERYFLLPIIDNIARSL---PLLA 173
G +++ RLRIGIG P A +I +VL P R I D I R+L P+L
Sbjct: 124 ALGTQDFWRLRIGIGHPRSQNTKAPVIDYVL---QRPRREDQDSIDDAIGRALQVVPMLC 180
Query: 174 KREDVSFLNHIVSVR 188
+ E + + +VR
Sbjct: 181 RGEFDKAMKELHTVR 195
>gi|160892147|ref|ZP_02073150.1| hypothetical protein BACUNI_04610 [Bacteroides uniformis ATCC 8492]
gi|270296233|ref|ZP_06202433.1| peptidyl-tRNA hydrolase [Bacteroides sp. D20]
gi|317480854|ref|ZP_07939935.1| peptidyl-tRNA hydrolase [Bacteroides sp. 4_1_36]
gi|156858625|gb|EDO52056.1| hypothetical protein BACUNI_04610 [Bacteroides uniformis ATCC 8492]
gi|270273637|gb|EFA19499.1| peptidyl-tRNA hydrolase [Bacteroides sp. D20]
gi|316902939|gb|EFV24812.1| peptidyl-tRNA hydrolase [Bacteroides sp. 4_1_36]
Length = 187
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 94/156 (60%), Gaps = 7/156 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH--SFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+++ GLGN G EY E RHNIGFM +D + + F + F +S + G + +L+
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMAVDALAKAAGATFTDGRYGFTTTLS---VKGRQLLLL 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG ++ M +P LEN LV+ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 60 KPSTFMNLSGNAVRYWMQKENIP-LENVLVVVDDLALPFGTLRLKGKGSDAGHNGLKHIA 118
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +NY RLR GIG I +VLG+F+ +
Sbjct: 119 STLGTQNYARLRFGIGNDFPRGGQIDYVLGHFTDED 154
>gi|294155988|ref|YP_003560372.1| aminoacyl-tRNA hydrolase [Mycoplasma crocodyli MP145]
gi|291599939|gb|ADE19435.1| aminoacyl-tRNA hydrolase [Mycoplasma crocodyli MP145]
Length = 190
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 104/186 (55%), Gaps = 19/186 (10%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT---- 56
M ++ GLGNPG Y RHN GFM ID I KK E+++ + +GL
Sbjct: 1 MRLIVGLGNPGDTYKFTRHNAGFMVIDIIL---------KKLGLELNKNKFNGLFVKIDD 51
Query: 57 -ILIKPQTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
I+ KP T+MNLSG + E+ NFYK LP E+ LVI+D+ D D G +K GG HNG
Sbjct: 52 LIIAKPMTYMNLSGTFVKELANFYKILP--EDILVIYDEKDYDIGNASIKVAGGVGSHNG 109
Query: 115 LKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
+K+ISE +K++RIGIGR + HVLGNF++ E L P++ N+A +
Sbjct: 110 VKNISENLDSVTFKKMRIGIGRGYGATRVKDHVLGNFTAGEMEKLEPVL-NLAADAAISY 168
Query: 174 KREDVS 179
D++
Sbjct: 169 AYNDIN 174
>gi|15644374|ref|NP_229426.1| peptidyl-tRNA hydrolase [Thermotoga maritima MSB8]
gi|7388026|sp|Q9X1W1|PTH_THEMA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|4982199|gb|AAD36693.1|AE001806_3 peptidyl-tRNA hydrolase [Thermotoga maritima MSB8]
Length = 186
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 101/172 (58%), Gaps = 6/172 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG Y RHN+GF+ +D + + WK + + ++ L G L+KP
Sbjct: 1 MVVVGLGNPGPRYAFTRHNVGFLFLDFLKN----KDWKTEKYFAWNKINLAGNEVALVKP 56
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ V+ F+ +L++ +V++DD+ L G +R++ G D GHNG+KSI +
Sbjct: 57 LTYMNLSGLAMPHVLKFFS-ASLDDIIVVYDDVSLKLGKIRIRKKGSDGGHNGMKSIIQA 115
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + KR+R+GIG P+ ++ VLG FS E L + + + +L ++
Sbjct: 116 LGTQEIKRIRVGIGDKPEGMDLVNFVLGEFSDEEWIILNKVFEVMKEALEVI 167
>gi|159902816|ref|YP_001550160.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9211]
gi|159887992|gb|ABX08206.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9211]
Length = 206
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 111/193 (57%), Gaps = 10/193 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GFM ++++ + + KK +++E + + L+ P
Sbjct: 9 LLVGLGNPGSKYSSTRHNVGFMVLEKLATKECASFSTSKKLFGQLAEIGIGAQKRRLLMP 68
Query: 62 QTFMNLSGQSLLEVMNFYKL-PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
T+MN SG+++ M+++ L PN + L+I DD+DL G LRL+ GG GHNGLKSI
Sbjct: 69 DTYMNESGRAVKAAMHWFGLQPN--HILIIVDDIDLPLGKLRLRYQGGAGGHNGLKSIIN 126
Query: 121 KCG-KNYKRLRIGIGRP-----PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G +N+ RLR+GIG+P + HVLG F+S E+ + +++ + L L+ +
Sbjct: 127 NLGTQNFSRLRVGIGKPVIAFEEKQVRTVSHVLGAFNSKEQLVMQSVLNEVVLGLNLIQE 186
Query: 175 REDVSFLNHIVSV 187
NH+ S+
Sbjct: 187 VGLEKAANHLNSM 199
>gi|228469893|ref|ZP_04054832.1| peptidyl-tRNA hydrolase [Porphyromonas uenonis 60-3]
gi|228308528|gb|EEK17316.1| peptidyl-tRNA hydrolase [Porphyromonas uenonis 60-3]
Length = 186
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 88/154 (57%), Gaps = 3/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNP EY RHNIGF + + + W H EI+ G++ ++ L+KP
Sbjct: 4 YLIVGLGNPTEEYRGTRHNIGFRMVSHLADQQGW-TWSTARHGEIASGRIKNVQLTLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M K+P +EN L+ DDL L FGTLR+K GG GHNGLK I+E
Sbjct: 63 STYMNLSGTAVRYWMRELKVP-IENILICLDDLALPFGTLRMKPGGSAGGHNGLKHITEL 121
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + Y RLR GIG I +VL F E
Sbjct: 122 LGTDRYPRLRFGIGHDYPRGKQIEYVLAQFPEGE 155
>gi|238855037|ref|ZP_04645365.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 269-3]
gi|260664821|ref|ZP_05865672.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii SJ-7A-US]
gi|282934823|ref|ZP_06340057.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 208-1]
gi|313472623|ref|ZP_07813112.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 1153]
gi|238832281|gb|EEQ24590.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 269-3]
gi|239529424|gb|EEQ68425.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 1153]
gi|260561304|gb|EEX27277.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii SJ-7A-US]
gi|281301095|gb|EFA93405.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 208-1]
Length = 185
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 99/159 (62%), Gaps = 3/159 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y +HN GFMC+D + + + KF ++ ++ G IL++
Sbjct: 1 MKIIAGLGNPGKKYDRTKHNTGFMCLDNYMAKNGLSLNQNKFEGLFTKEKIAGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ +V NF+K+ + + L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNESGRSISQVANFFKI-DPSDILIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G + + RL+IGI R P+ ++ VL F++ ++ +
Sbjct: 120 DLGTEKFNRLKIGI-RHPENTTVVSWVLTPFNNEQQKLM 157
>gi|313683046|ref|YP_004060784.1| peptidyl-tRNA hydrolase [Sulfuricurvum kujiense DSM 16994]
gi|313155906|gb|ADR34584.1| peptidyl-tRNA hydrolase [Sulfuricurvum kujiense DSM 16994]
Length = 182
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 104/176 (59%), Gaps = 8/176 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT-ILIK 60
++ GLGNPG Y RHNIGFM ID + H K EG+L + + L+K
Sbjct: 1 MLIVGLGNPGSAYVSTRHNIGFMVIDELCRRHSVQNISKSSF----EGELFKMGSHFLLK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+L V NFYK+ + +VIHDDLDL FG LR K GGG GHNGLKS
Sbjct: 57 PTTYMNLSGRSILAVKNFYKI---DEVIVIHDDLDLPFGALRFKNGGGHGGHNGLKSADA 113
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G +Y R+R+GIG+P + + +VL FS+ E+ L I A ++ +L ++
Sbjct: 114 AIGADYTRVRMGIGKPEHKSQVADYVLHPFSAGEQEQLPQWIGRAADAVEMLFTQQ 169
>gi|283853057|ref|ZP_06370313.1| peptidyl-tRNA hydrolase [Desulfovibrio sp. FW1012B]
gi|283571524|gb|EFC19528.1| peptidyl-tRNA hydrolase [Desulfovibrio sp. FW1012B]
Length = 206
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 103/176 (58%), Gaps = 18/176 (10%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMC----IDRIHSFHFFP----AWKKKFHAE-ISEGQLDG 53
++ GLGNPG Y RHN GFM IDR P + +K A+ +S L G
Sbjct: 6 LIVGLGNPGPRYAATRHNYGFMAVDAVIDRARELGGAPKAALSARKDMEAQAVSLPVLPG 65
Query: 54 ---LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
+ + +KP TFMNLSG+++ M+FYKL + LV+HD+LDL G +R K GGG+A
Sbjct: 66 GAFAQFLCLKPLTFMNLSGRAVRAAMDFYKL-GPTDVLVLHDELDLPLGRMRAKRGGGNA 124
Query: 111 GHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
GHNGLKS++++ G ++ RLR+GIGRP + +VL F + E +P++ +
Sbjct: 125 GHNGLKSLTQELGSPDFVRLRLGIGRPEPGRDVAGYVLEPFRAEE----IPVVRRV 176
>gi|310829354|ref|YP_003961711.1| peptidyl-tRNA hydrolase [Eubacterium limosum KIST612]
gi|308741088|gb|ADO38748.1| peptidyl-tRNA hydrolase [Eubacterium limosum KIST612]
Length = 203
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 101/181 (55%), Gaps = 3/181 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG EY RHNIGF +D I K + +G + +L+K
Sbjct: 1 MYLIIGLGNPGREYALTRHNIGFEAVDYIAGQKNVQITKDEHEGLTGVYFENGEKVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG + E++++Y +P LEN LVI+DD+DLD G +R++ G HNG++SI
Sbjct: 61 PMTYMNNSGLCVEELVSYYDVP-LENTLVIYDDIDLDPGKIRIRKKGSAGTHNGMRSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ +N+ R+RIGIG+ P + +VL F+ E + + A ++ ED+
Sbjct: 120 QLQDQNFPRIRIGIGKKPPQWDLANYVLSKFTPDETEVMREAVKKTAEAVEFYIN-EDID 178
Query: 180 F 180
F
Sbjct: 179 F 179
>gi|325282473|ref|YP_004255014.1| Peptidyl-tRNA hydrolase [Deinococcus proteolyticus MRP]
gi|324314282|gb|ADY25397.1| Peptidyl-tRNA hydrolase [Deinococcus proteolyticus MRP]
Length = 210
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 99/170 (58%), Gaps = 9/170 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE------GQLDGL 54
M ++ GLGNPG +Y RHN+G++ +D + + W+K AE E G G
Sbjct: 1 MRLIVGLGNPGEKYAATRHNVGWLVVDEL-ARRTGGHWRKDGEAETCEVRLGQGGGQAGE 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
+ +L+KPQTFMN SG+++ ++++Y+L ++ LV+ DDLD FG L+L+ GG G NG
Sbjct: 60 KVLLVKPQTFMNSSGRAVAPLLSYYRLAP-DDLLVVQDDLDSPFGLLKLRRGGRHGGQNG 118
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
L+ I G +++ RL+IGI RPP VL ++ ER L ++D
Sbjct: 119 LRDIIRLLGTQDFDRLKIGISRPPPGRDPADWVLSRWAEAERPVLERLVD 168
>gi|189467497|ref|ZP_03016282.1| hypothetical protein BACINT_03886 [Bacteroides intestinalis DSM
17393]
gi|189435761|gb|EDV04746.1| hypothetical protein BACINT_03886 [Bacteroides intestinalis DSM
17393]
Length = 187
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 95/157 (60%), Gaps = 7/157 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI--HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+++ GLGN G EY E RHNIGFM +D + + F + F +S + G + +L+
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMVVDALAKEAGATFNDGRYGFTTTLS---VKGRQLLLL 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG ++ M +P LEN L+I DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 60 KPSTFMNLSGNAVRYWMQKENIP-LENVLIIVDDLALSFGTLRLKGKGSDAGHNGLKHIA 118
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G +NY RLR GIG + +VLG+F+ ++
Sbjct: 119 AILGTQNYARLRFGIGNEFPRGGQVDYVLGHFTEEDQ 155
>gi|78778637|ref|YP_396749.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9312]
gi|119390977|sp|Q31CT2|PTH_PROM9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78712136|gb|ABB49313.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9312]
Length = 200
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 105/188 (55%), Gaps = 8/188 (4%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTF 64
GLGNPG +Y +RHNIGF+ ++ + ++ K K + SE + + L P TF
Sbjct: 8 GLGNPGKKYSNSRHNIGFLLLENLSKKYNSSFLLKDKLKSFYSEFKANDSTYRLFLPNTF 67
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK 124
MN SG+++L ++++YK+ NL VI DD DL G +R + G GHNGLKSI EK
Sbjct: 68 MNNSGEAVLAILDWYKI-NLNQIFVIVDDKDLPLGKIRFRKKGSSGGHNGLKSIIEKLQT 126
Query: 125 -NYKRLRIGIGRPPDTA-----HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
++ R+RIGIG PP T + I HVLGN S E+ L + + SL L +++
Sbjct: 127 HDFNRIRIGIGSPPSTKETNNFNTISHVLGNISREEKSILDKVYVRVIESLEQLNTKKEE 186
Query: 179 SFLNHIVS 186
+N + S
Sbjct: 187 YIINKLNS 194
>gi|307693779|ref|ZP_07636016.1| peptidyl-tRNA hydrolase [Ruminococcaceae bacterium D16]
Length = 185
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 99/170 (58%), Gaps = 3/170 (1%)
Query: 7 LGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMN 66
LGNPG +Y RHN+GFM D++ + P K KF A + + G + +++KP T+MN
Sbjct: 5 LGNPGDQYENTRHNVGFMVADQLGERYRLPIQKLKFKALTNVFTISGEKVLVMKPVTYMN 64
Query: 67 LSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN- 125
LSG+++ +FYK+P E+ +VI DD LD G LR++ G GHNGLKSI + G +
Sbjct: 65 LSGEAVRPAADFYKIPP-EHIIVISDDTALDVGKLRIRKSGSAGGHNGLKSIIQHLGTDQ 123
Query: 126 YKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ R+R+G+G+ P + + VLG F +R + ++ A ++ K
Sbjct: 124 FPRIRVGVGKKPHPDYDLADWVLGKFQGEDRKAIAAAVERCADAVECYIK 173
>gi|332169725|gb|AEE18980.1| peptidyl-tRNA hydrolase [Krokinobacter diaphorus 4H-3-7-5]
Length = 210
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 94/164 (57%), Gaps = 12/164 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAE----ISEGQLDGLRTI 57
F++ GLGN G +Y E RHNIGF +D F A + F E I+ ++ G I
Sbjct: 26 FLIVGLGNIGPKYTETRHNIGFKVVD-----AFAKAQETTFETEKLGDIARTKVKGKTVI 80
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KP TFMNLSG+++ + K+P +EN LVI DDL+L+FGT+R+KT G GHNGLK
Sbjct: 81 LLKPNTFMNLSGKAIRYWLQQEKIP-VENLLVITDDLNLEFGTIRVKTKGSAGGHNGLKD 139
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLP 160
+ + Y R R GI T + +VLG + +PE LP
Sbjct: 140 TQAQLNTSAYNRFRFGISDAFSTGRQVDYVLGEW-TPEEQASLP 182
>gi|260102335|ref|ZP_05752572.1| aminoacyl-tRNA hydrolase [Lactobacillus helveticus DSM 20075]
gi|260083844|gb|EEW67964.1| aminoacyl-tRNA hydrolase [Lactobacillus helveticus DSM 20075]
gi|328463459|gb|EGF35110.1| peptidyl-tRNA hydrolase [Lactobacillus helveticus MTCC 5463]
Length = 185
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 104/182 (57%), Gaps = 3/182 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y + +HN GFM +D + K KF ++ +++G IL++
Sbjct: 1 MKIIAGLGNPGQKYDKTKHNTGFMTMDHYLNEKGLSLDKDKFEGHWTKQKINGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++ NF+K+ E+ L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNESGRSVSQIANFFKVA-PEDVLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + RL+IGI P +T ++ VL F+ ++ + D + + D
Sbjct: 120 DLGTEKFNRLKIGIRHPKNTT-VVSWVLTPFNDEQQKLMDDAFDTSVKIIDDFITGRDSQ 178
Query: 180 FL 181
+L
Sbjct: 179 YL 180
>gi|85057847|ref|YP_456763.1| peptidyl-tRNA hydrolase [Aster yellows witches'-broom phytoplasma
AYWB]
gi|119390912|sp|Q2NIQ9|PTH_AYWBP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|84789952|gb|ABC65684.1| peptidyl-tRNA hydrolase [Aster yellows witches'-broom phytoplasma
AYWB]
Length = 188
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 92/134 (68%), Gaps = 2/134 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG ++ RHNIGF+ +D S + + K+ +A I + + +T+LIK
Sbjct: 1 MKLIVGLGNPGKKFLNTRHNIGFVVVDSFLSQNKYQTLKEDTNAHIYQINFNNHQTLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+ + +++N Y++ +EN LVI DD+ LD G L+LK GG GHNGL++I +
Sbjct: 61 PQTYMNLSGEVVKKIINKYRIK-IENILVIVDDIYLDEGKLKLKMQGGHGGHNGLRNIID 119
Query: 121 K-CGKNYKRLRIGI 133
+ C K +KRL+IG+
Sbjct: 120 RLCTKQFKRLKIGV 133
>gi|317124067|ref|YP_004098179.1| peptidyl-tRNA hydrolase [Intrasporangium calvum DSM 43043]
gi|315588155|gb|ADU47452.1| peptidyl-tRNA hydrolase [Intrasporangium calvum DSM 43043]
Length = 194
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 116/185 (62%), Gaps = 8/185 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEG--QLDGLRTIL 58
++V GLGNPG Y NRHN+G M +D + S H ++K + A + EG ++ G + +L
Sbjct: 4 WLVVGLGNPGPAYAGNRHNVGAMVVDELASRHRLGSFKTHRSRARVVEGRFRVPGPKVVL 63
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
P T+MN+SG + +++++ +P LE +V+HD+LD+D G +RLK GGG+ GHNGL+SI
Sbjct: 64 AVPLTYMNVSGGPVAGLLSYFGVP-LERLVVVHDELDIDAGLVRLKVGGGEGGHNGLRSI 122
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
S+ G K+Y R+R+GIGRPP +VL +F ER L ++D A ++ L D
Sbjct: 123 SQSVGSKDYHRVRVGIGRPPGRQDPADYVLRDFGKQERAELPFLLDEAADAVEALI---D 179
Query: 178 VSFLN 182
V L+
Sbjct: 180 VGLLD 184
>gi|170289079|ref|YP_001739317.1| aminoacyl-tRNA hydrolase [Thermotoga sp. RQ2]
gi|238688752|sp|B1LBD6|PTH_THESQ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|170176582|gb|ACB09634.1| Aminoacyl-tRNA hydrolase [Thermotoga sp. RQ2]
Length = 186
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 101/172 (58%), Gaps = 6/172 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG Y RHN+GF+ +D + + WK + + ++ L G L+KP
Sbjct: 1 MVVVGLGNPGPRYAFTRHNVGFLFLDFLKN----KDWKTEKYFAWNKINLAGNEVALVKP 56
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ V+ F+ +L++ +V++DD+ L G +R++ G D GHNG+KSI +
Sbjct: 57 LTYMNLSGLAMPHVLKFFS-ASLDDIIVVYDDVSLKLGKIRIRKKGSDGGHNGMKSIIQA 115
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + KR+R+GIG P+ ++ VLG FS E L + + + +L ++
Sbjct: 116 LGTQEIKRIRVGIGDKPEGMDLVDFVLGEFSDEEWIILNKVFEVMKEALEVI 167
>gi|255974756|ref|ZP_05425342.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T2]
gi|256855210|ref|ZP_05560571.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T8]
gi|307278655|ref|ZP_07559725.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0860]
gi|307290198|ref|ZP_07570116.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0411]
gi|255967628|gb|EET98250.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T2]
gi|256709723|gb|EEU24770.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T8]
gi|306498754|gb|EFM68253.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0411]
gi|306504715|gb|EFM73915.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0860]
gi|315028826|gb|EFT40758.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4000]
Length = 188
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 2/151 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y E +HNIGF+ +D I F A+I+E + + +L+K
Sbjct: 1 MKVIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++ ++ + E+ +VI+DDLDL+ G +RL+ G GHNG+KS+
Sbjct: 61 PLTFMNESGRSVGPLLTYFGVDE-EDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNF 150
G N + R++IGIGRP +I HVL F
Sbjct: 120 HLGTNVFPRIKIGIGRPSKNDTVIHHVLSIF 150
>gi|191639458|ref|YP_001988624.1| peptidyl-tRNA hydrolase [Lactobacillus casei BL23]
gi|227533043|ref|ZP_03963092.1| peptidyl-tRNA hydrolase (PTH) [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239630378|ref|ZP_04673409.1| peptidyl-tRNA hydrolase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301067529|ref|YP_003789552.1| peptidyl-tRNA hydrolase [Lactobacillus casei str. Zhang]
gi|238693015|sp|B3WAP7|PTH_LACCB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|190713760|emb|CAQ67766.1| Peptidyl-tRNA hydrolase (PTH) [Lactobacillus casei BL23]
gi|205270977|emb|CAP07850.1| peptidyl tRNA hydrolase [Lactobacillus casei BL23]
gi|227189444|gb|EEI69511.1| peptidyl-tRNA hydrolase (PTH) [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239526661|gb|EEQ65662.1| peptidyl-tRNA hydrolase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300439936|gb|ADK19702.1| Peptidyl-tRNA hydrolase [Lactobacillus casei str. Zhang]
gi|327383551|gb|AEA55027.1| Peptidyl-tRNA hydrolase [Lactobacillus casei LC2W]
gi|327386743|gb|AEA58217.1| Peptidyl-tRNA hydrolase [Lactobacillus casei BD-II]
Length = 185
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 99/165 (60%), Gaps = 7/165 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y ++HN+GFM +D + K +F A + +L+G + L+K
Sbjct: 1 MKMIVGLGNPGQKYAGSKHNMGFMVVDGLAKRLNLTIDKLEFDAATATTRLNGEKIFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ E+M FY++ L+ V+ DD+DL G LRL+ G GHNG+K I
Sbjct: 61 PQTFMNASGRAVRELMMFYQI-QLDEIFVVQDDMDLTLGKLRLRKRGSAGGHNGIKDIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G + + RL+IGI + P ++ VL FS ++ P+ID+
Sbjct: 120 ATGSDEFCRLKIGI-QHPQRQRVVDWVLTPFSKTDQ----PLIDD 159
>gi|161506854|ref|YP_001576808.1| peptidyl-tRNA hydrolase [Lactobacillus helveticus DPC 4571]
gi|172048360|sp|A8YXI6|PTH_LACH4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|160347843|gb|ABX26517.1| Peptidyl-trna hydrolase_290 [Lactobacillus helveticus DPC 4571]
Length = 185
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 104/182 (57%), Gaps = 3/182 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y + +HN GFM +D + K KF ++ +++G IL++
Sbjct: 1 MKIIAGLGNPGQKYDKTKHNTGFMTLDHYLNEKGLSLDKDKFEGHWTKQKINGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++ NF+K+ E+ L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNESGRSVSQIANFFKVA-PEDVLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + RL+IGI P +T ++ VL F+ ++ + D + + D
Sbjct: 120 DLGTEKFNRLKIGIRHPKNTT-VVSWVLTPFNDEQQKLMDDAFDTSVKIIDDFIAGRDSQ 178
Query: 180 FL 181
+L
Sbjct: 179 YL 180
>gi|226354902|ref|YP_002784642.1| peptidyl-tRNA hydrolase [Deinococcus deserti VCD115]
gi|259535153|sp|C1CXT2|PTH_DEIDV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226316892|gb|ACO44888.1| putative Peptidyl-tRNA hydrolase [Deinococcus deserti VCD115]
Length = 220
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 99/162 (61%), Gaps = 6/162 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE---GQLDGLRTI 57
M +V GLGNPG +Y + RHN+G++ ++ + + + W+K+ AE++E G G++ +
Sbjct: 1 MKLVVGLGNPGTQYAQTRHNVGWLVVNEV-ARRWGATWRKEKDAEVAEIRLGPAPGVKVL 59
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KPQTFMN SG++++ ++F+KL + LV+ DDLD FG ++++ GG G NG++
Sbjct: 60 LVKPQTFMNASGKAVVPRLSFFKL-DPGALLVVQDDLDSPFGLMKVRLGGRHGGQNGVRD 118
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
I G + + RL++GI RPP VL + E+ L
Sbjct: 119 IIRLLGTEAFARLKLGISRPPAGRDPADWVLSRWRDEEQSTL 160
>gi|256852010|ref|ZP_05557397.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii 27-2-CHN]
gi|260661421|ref|ZP_05862334.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii 115-3-CHN]
gi|282933682|ref|ZP_06339040.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 208-1]
gi|297205118|ref|ZP_06922514.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii JV-V16]
gi|256615422|gb|EEU20612.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii 27-2-CHN]
gi|260547876|gb|EEX23853.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii 115-3-CHN]
gi|281302172|gb|EFA94416.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 208-1]
gi|297149696|gb|EFH29993.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii JV-V16]
Length = 185
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 100/159 (62%), Gaps = 3/159 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y + +HN GFMC+D + + + KF ++ ++ G IL++
Sbjct: 1 MKLIAGLGNPGKKYDKTKHNTGFMCLDNYMAKNNLSLNQNKFEGLFTKEKIAGKDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ +V NF+K+ + + L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNESGRSIRQVANFFKI-DPSDILIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G + + RL+IGI R P+ ++ VL F++ ++ +
Sbjct: 120 DLGTEKFNRLKIGI-RHPENTTVVSWVLTPFNNEQQKLM 157
>gi|225011225|ref|ZP_03701684.1| Aminoacyl-tRNA hydrolase [Flavobacteria bacterium MS024-3C]
gi|225004639|gb|EEG42602.1| Aminoacyl-tRNA hydrolase [Flavobacteria bacterium MS024-3C]
Length = 188
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 91/155 (58%), Gaps = 3/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G EY E RHNIGF ++ + H +K +++ ++ G IL+KP
Sbjct: 4 FLIVGLGNIGAEYAETRHNIGFKIVEALAHKHEQSFETQKL-GDLATVKIKGRSLILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG++++ M K+P +EN LV+ DD+ L FG++RLK G D GHNGLK I E
Sbjct: 63 STYMNLSGKAVMYWMEKEKIP-MENVLVVTDDIHLPFGSIRLKAKGSDGGHNGLKDIQEN 121
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
Y R R G+G + +VLG +S ER
Sbjct: 122 LNTVQYNRYRFGVGADFGAGRQVDYVLGEWSVEER 156
>gi|319901551|ref|YP_004161279.1| peptidyl-tRNA hydrolase [Bacteroides helcogenes P 36-108]
gi|319416582|gb|ADV43693.1| peptidyl-tRNA hydrolase [Bacteroides helcogenes P 36-108]
Length = 187
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 95/157 (60%), Gaps = 7/157 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI--HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+++ GLGN G EY E RHNIGFM +D + + F + F A +S + G + +L+
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMAVDALAKDAGVSFTDGRYGFTATLS---VKGRQLLLL 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 60 KPSTYMNLSGNAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIA 118
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G +NY RLR GIG + VLG+F+ +R
Sbjct: 119 ATLGTQNYARLRFGIGNEFPRGGQVDFVLGHFTDEDR 155
>gi|313891661|ref|ZP_07825268.1| aminoacyl-tRNA hydrolase [Dialister microaerophilus UPII 345-E]
gi|313119939|gb|EFR43124.1| aminoacyl-tRNA hydrolase [Dialister microaerophilus UPII 345-E]
Length = 190
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY + RHNIGF ++ + WK ++EIS +G + I K
Sbjct: 1 MKLIVGLGNPGKEYEKTRHNIGFDVLELFSHRNKLSLWKNFMNSEISTVMNNGEKIIFAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-S 119
PQT+MN SG+S+ ++ +YK+ E+ VI DDLDL G +R++ G GHNGLKSI +
Sbjct: 61 PQTYMNNSGESIGDIAKYYKIE-PEDIWVICDDLDLPVGKVRIRKKGSAGGHNGLKSIMA 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLG 148
+N+ R R+GIG P + +I HVLG
Sbjct: 120 HLQSENFCRFRVGIGHPKNGHTVIEHVLG 148
>gi|330722354|gb|EGH00210.1| Peptidyl-tRNA hydrolase [gamma proteobacterium IMCC2047]
Length = 197
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 94/170 (55%), Gaps = 3/170 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G + + S H KKFH ++ ++ + P
Sbjct: 7 LIVGLGNPGQQYEQTRHNAGAEFVSELVKSCHGELKADKKFHGLYAKIRVADQDCHCLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-ISE 120
TFMN SGQS+ + NFYK+P + LV HD+LD+ GT R K GG GHNGL+ IS
Sbjct: 67 TTFMNRSGQSVAALANFYKIP-ADAILVAHDELDIAPGTARFKVDGGHGGHNGLRDIISH 125
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ +KRLR+GIG P D + ++ VL ER L ID R+LP
Sbjct: 126 LNTRAFKRLRLGIGHPGDRSQVVDFVLKKAPKSERELLGASIDEAIRTLP 175
>gi|116495979|ref|YP_807713.1| peptidyl-tRNA hydrolase [Lactobacillus casei ATCC 334]
gi|122262621|sp|Q034V1|PTH_LACC3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116106129|gb|ABJ71271.1| peptidyl-tRNA hydrolase [Lactobacillus casei ATCC 334]
Length = 185
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 99/165 (60%), Gaps = 7/165 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y ++HN+GFM +D + K +F A + +L+G + L+K
Sbjct: 1 MKMIVGLGNPGQKYAGSKHNMGFMVVDGLAKRLNLTIDKLEFDAATATTRLNGEKIFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ E+M FY++ L+ V+ DD+DL G LRL+ G GHNG+K I
Sbjct: 61 PQTFMNASGRAVRELMMFYQI-QLDEIFVVQDDMDLTLGKLRLRKRGSAGGHNGIKDIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G + + RL+IGI + P ++ VL FS ++ P+ID+
Sbjct: 120 ATGSDEFCRLKIGI-QHPKRQRVVDWVLTPFSKTDQ----PLIDD 159
>gi|291277021|ref|YP_003516793.1| peptidyl-tRNA hydrolase [Helicobacter mustelae 12198]
gi|290964215|emb|CBG40064.1| peptidyl-tRNA hydrolase [Helicobacter mustelae 12198]
Length = 184
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 112/187 (59%), Gaps = 8/187 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHNIGF I+ + S + K E+++ + LIKP
Sbjct: 4 LIVGLGNPGPQYQNTRHNIGFEVIEALADSIKISFRYDSKLLCELAQYKTKEQNFFLIKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSGQS+ +V ++YK +EN LVIHD+LD+ G +R K+GGG+ GHNGLKSI +
Sbjct: 64 QTFMNLSGQSVKKVQDYYK---IENLLVIHDELDIPVGAVRFKSGGGNGGHNGLKSIDQN 120
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
CG Y+R+R GIGR ++ +VLG F E+ +I + R+L + D +
Sbjct: 121 CGNTYQRMRCGIGRSA-LIPVVDYVLGKFEEKEKK---QMITHCVRALLEFLQNPDFVRM 176
Query: 182 NHIVSVR 188
++ +++
Sbjct: 177 QNLFTIK 183
>gi|223936332|ref|ZP_03628244.1| Aminoacyl-tRNA hydrolase [bacterium Ellin514]
gi|223894850|gb|EEF61299.1| Aminoacyl-tRNA hydrolase [bacterium Ellin514]
Length = 197
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW--KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y RHN+GF ++ + + +W +KKF A ++ + +G R +L K
Sbjct: 6 LIVGLGNPGSKYALTRHNVGFRLVECLAE-RWKASWVAEKKFDAMLARTERNGERILLCK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ + +FY+LP L +V DD DL FG +R++ G GH+GL+SI +
Sbjct: 65 PQTFMNASGETVGAMASFYRLP-LPQLVVAVDDADLPFGQIRMRANGSSGGHHGLESIEK 123
Query: 121 KCG-KNYKRLRIGIGRPPDT-AHIIRHVLGNFSSPE 154
G + + RLR+GIGR D I +VL FS E
Sbjct: 124 HLGTREFARLRLGIGRAADDRREITDYVLAPFSGAE 159
>gi|53712488|ref|YP_098480.1| peptidyl-tRNA hydrolase [Bacteroides fragilis YCH46]
gi|60680688|ref|YP_210832.1| peptidyl-tRNA hydrolase [Bacteroides fragilis NCTC 9343]
gi|253563481|ref|ZP_04840938.1| peptidyl-tRNA hydrolase [Bacteroides sp. 3_2_5]
gi|265762651|ref|ZP_06091219.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_1_16]
gi|68052914|sp|Q64X30|PTH_BACFR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|81316244|sp|Q5LG56|PTH_BACFN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|52215353|dbj|BAD47946.1| peptidyl-tRNA hydrolase [Bacteroides fragilis YCH46]
gi|60492122|emb|CAH06885.1| putative peptidyl-tRNA hydrolase [Bacteroides fragilis NCTC 9343]
gi|251947257|gb|EES87539.1| peptidyl-tRNA hydrolase [Bacteroides sp. 3_2_5]
gi|263255259|gb|EEZ26605.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_1_16]
gi|301162215|emb|CBW21760.1| putative peptidyl-tRNA hydrolase [Bacteroides fragilis 638R]
Length = 187
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 101/176 (57%), Gaps = 10/176 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH--FFPAWKKKFHAEISEGQLDGLRTILI 59
+++ GLGN G EY E RHNIGFM +D + + F + F +S + G + IL+
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMVLDALARANNLSFTDGRYGFTTTLS---VKGRQMILL 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG ++ M +P LEN L+I DDL L FGTLRLK+ G DAGHNGLK I+
Sbjct: 60 KPSTFMNLSGNAVRYWMQKENIP-LENVLIIVDDLALPFGTLRLKSKGSDAGHNGLKHIA 118
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL---LPIIDNIARSLPL 171
G +NY RLR GIG I VLG+F+ + + L IA+S L
Sbjct: 119 TILGTQNYARLRFGIGNDFPRGGQIDFVLGHFTDEDWKTMDERLETAGEIAKSFCL 174
>gi|289422642|ref|ZP_06424483.1| aminoacyl-tRNA hydrolase [Peptostreptococcus anaerobius 653-L]
gi|289156942|gb|EFD05566.1| aminoacyl-tRNA hydrolase [Peptostreptococcus anaerobius 653-L]
Length = 186
Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 88/137 (64%), Gaps = 2/137 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNPG +Y RHN GF +D + K K A I E ++ + IL+K
Sbjct: 1 MYIIMGLGNPGKKYENTRHNAGFDVVDELAKRLNVSIDKIKHKALIGEARIGTEKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG++ + + FYK+ +L+ +V++DD+DLD G LR++ G HNG+KSI +
Sbjct: 61 PQTYMNLSGETAISISQFYKM-DLDKLIVVYDDIDLDIGKLRIRKKGSAGSHNGMKSIIK 119
Query: 121 KCG-KNYKRLRIGIGRP 136
G +++ R+R+G+ +P
Sbjct: 120 CLGSQDFPRVRVGVSKP 136
>gi|328478087|gb|EGF47960.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus MTCC 5462]
Length = 185
Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 98/164 (59%), Gaps = 7/164 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HN+GFM +D + K +F A + ++D + L+K
Sbjct: 1 MKMIVGLGNPGRQYAGTKHNMGFMVVDGLAQRMGLTLNKLEFDAATATTRVDDEKVFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ ++M +Y++ L+ LV+HDD+DL G LRL+ G GHNG+K I
Sbjct: 61 PQTYMNASGRAVRQLMMYYQI-RLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G + + RL+IGI + P ++ VL F+ ++ P+ID
Sbjct: 120 ATGSDEFYRLKIGI-QHPQRQRVVDWVLTPFAKTDQ----PVID 158
>gi|326318321|ref|YP_004235993.1| peptidyl-tRNA hydrolase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323375157|gb|ADX47426.1| peptidyl-tRNA hydrolase [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 213
Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 6 GLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
GLGNPG +Y RHN GF ID R H P ++ +H ++ ++G L++PQ
Sbjct: 7 GLGNPGPDYDATRHNAGFWWIDGLARDLKVHLVP--ERAYHGLVARANVNGQSVWLLQPQ 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S+ + F+K+ E LV HD+LD+ G +LK GG AGHNGL+ I +
Sbjct: 65 TFMNLSGKSVAALARFFKIQPQE-ILVAHDELDIVPGQAKLKRGGSHAGHNGLRDIHAQL 123
Query: 123 GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +Y RLRIGIG P A + VL S R I D+IA SL
Sbjct: 124 GSPDYWRLRIGIGHPGVKAEVANWVLKKPSPDHRTL---IEDSIAHSL 168
>gi|295692137|ref|YP_003600747.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus ST1]
gi|295030243|emb|CBL49722.1| Peptidyl-tRNA hydrolase [Lactobacillus crispatus ST1]
Length = 185
Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 98/159 (61%), Gaps = 3/159 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y + +HN GFM +D + K KF ++ +++G IL++
Sbjct: 1 MKIIAGLGNPGQKYDKTKHNTGFMTMDHYLNEKGLSLDKDKFEGHWTKQKINGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +V NF+K+ + + L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNESGRSVSQVANFFKV-DPADVLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G + + RL+IGI R P A ++ VL F+ ++ +
Sbjct: 120 DLGTEKFNRLKIGI-RHPKNATVVSWVLTPFNDEQQKLM 157
>gi|82523965|emb|CAI78776.1| Peptidyl-tRNA hydrolase [uncultured epsilon proteobacterium]
Length = 185
Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 107/180 (59%), Gaps = 10/180 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT-ILIKP 61
++ GLGNPG Y NRHNIGFM ID + F A +K + +G+L L+KP
Sbjct: 2 LIVGLGNPGPTYENNRHNIGFMVIDEL--IKRFDA--RKLPSSPFKGELFKFSEHFLLKP 57
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ V NFYK+ E +VIHDDLDL FGTLR K GGG GHNGLKS EK
Sbjct: 58 LTYMNLSGESIQAVKNFYKI---EQVIVIHDDLDLPFGTLRFKFGGGHGGHNGLKSADEK 114
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR--EDVS 179
+ Y R+R+GIG+P + +VL +F+ E+ L I + ++ L K ED S
Sbjct: 115 ISREYLRIRMGIGKPEHKGEVASYVLSDFNPSEQKHLGMWISHTCNAVEFLLKNTLEDTS 174
>gi|227878366|ref|ZP_03996321.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus JV-V01]
gi|256844409|ref|ZP_05549895.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus 125-2-CHN]
gi|256849203|ref|ZP_05554636.1| peptidyl-tRNA hydrolase_290 [Lactobacillus crispatus MV-1A-US]
gi|262047219|ref|ZP_06020177.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus MV-3A-US]
gi|293380356|ref|ZP_06626427.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus 214-1]
gi|312978408|ref|ZP_07790150.1| aminoacyl-tRNA hydrolase [Lactobacillus crispatus CTV-05]
gi|227862045|gb|EEJ69609.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus JV-V01]
gi|256613487|gb|EEU18690.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus 125-2-CHN]
gi|256713979|gb|EEU28967.1| peptidyl-tRNA hydrolase_290 [Lactobacillus crispatus MV-1A-US]
gi|260572464|gb|EEX29026.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus MV-3A-US]
gi|290923039|gb|EFD99970.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus 214-1]
gi|310894751|gb|EFQ43823.1| aminoacyl-tRNA hydrolase [Lactobacillus crispatus CTV-05]
Length = 185
Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 98/159 (61%), Gaps = 3/159 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y + +HN GFM +D + K KF ++ +++G IL++
Sbjct: 1 MKIIAGLGNPGQKYDKTKHNTGFMTMDHYLNEKGLSLDKDKFEGHWTKQKINGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +V NF+K+ + + L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNESGRSVSQVANFFKV-DPADVLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G + + RL+IGI R P A ++ VL F+ ++ +
Sbjct: 120 DLGTEKFNRLKIGI-RHPKNATVVSWVLTPFNDEQQKLM 157
>gi|167751279|ref|ZP_02423406.1| hypothetical protein EUBSIR_02265 [Eubacterium siraeum DSM 15702]
gi|167655786|gb|EDR99915.1| hypothetical protein EUBSIR_02265 [Eubacterium siraeum DSM 15702]
gi|291556782|emb|CBL33899.1| peptidyl-tRNA hydrolase [Eubacterium siraeum V10Sc8a]
Length = 209
Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 100/173 (57%), Gaps = 3/173 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN GFM D + K KF + I++ ++G I++KP
Sbjct: 24 YLIVGLGNPGTQYENTRHNAGFMAADTLAEKLGVQIKKLKFKSLIADCAIEGRHCIIMKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ E MNFYK+P +N LV++DD+ LD G R++ G D GHNG+KSI
Sbjct: 84 STFMNNSGEAVGEAMNFYKIPP-QNILVMYDDISLDVGRTRIRRKGSDGGHNGIKSIILH 142
Query: 122 CGKN-YKRLRIGIG-RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ + R++IG+G +P + VL F + L +DN A + L+
Sbjct: 143 TNSDAFPRIKIGVGAKPHPDFPLADWVLSGFKKEDGENLEKALDNAAEAARLI 195
>gi|157363318|ref|YP_001470085.1| peptidyl-tRNA hydrolase [Thermotoga lettingae TMO]
gi|172045981|sp|A8F4D7|PTH_THELT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157313922|gb|ABV33021.1| Aminoacyl-tRNA hydrolase [Thermotoga lettingae TMO]
Length = 187
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 98/173 (56%), Gaps = 6/173 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NRHN+GFM +DR F W+ + S+ + L+K
Sbjct: 1 MKVIVGLGNPGPRYAFNRHNVGFMFVDRFKEFKKCSTWQHRDRYTFSQCK----DIFLVK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG ++++ + + + +V++DD+DL G LR+K GG GH GL+SI +
Sbjct: 57 PNTFMNLSGIAVIKCQRDFHVTT-TDIIVVYDDVDLPCGRLRIKAQGGSGGHRGLQSIID 115
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G N + RLRIGIG P+ + +VL +F+ E + ++D ++ ++
Sbjct: 116 YIGTNEFVRLRIGIGPKPENIDLADYVLEDFTEEELRLIDKVLDKAVEAVDVM 168
>gi|299140505|ref|ZP_07033643.1| aminoacyl-tRNA hydrolase [Prevotella oris C735]
gi|298577471|gb|EFI49339.1| aminoacyl-tRNA hydrolase [Prevotella oris C735]
Length = 190
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 94/165 (56%), Gaps = 8/165 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTIL 58
F++ GLGNPG EY + RHN GFM +D + + HF + K + I+E + G + IL
Sbjct: 4 FLICGLGNPGDEYQDTRHNTGFMVLDAFAKASNIHF----EDKRYGYIAETTIKGRKLIL 59
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP TFMNLSG ++ +N + + LVI DD+ L G RLK G + GHNGL +I
Sbjct: 60 LKPTTFMNLSGNAVRYWLNKENIVQ-SHLLVISDDIALPLGAFRLKANGSNGGHNGLGNI 118
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+ G++Y RLR+GIG + VLG + + E L P ID
Sbjct: 119 QQLIGQDYARLRMGIGNEYPKGGQVDWVLGKYDADEMKRLQPSID 163
>gi|226307813|ref|YP_002767773.1| peptidyl-tRNA hydrolase [Rhodococcus erythropolis PR4]
gi|229494924|ref|ZP_04388675.1| peptidyl-tRNA hydrolase [Rhodococcus erythropolis SK121]
gi|259535232|sp|C1A349|PTH_RHOE4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226186930|dbj|BAH35034.1| peptidyl-tRNA hydrolase [Rhodococcus erythropolis PR4]
gi|229318148|gb|EEN84018.1| peptidyl-tRNA hydrolase [Rhodococcus erythropolis SK121]
Length = 190
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 108/173 (62%), Gaps = 11/173 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-----FHFFPAWKKKFHAEISEGQLDGLRTI 57
+V GLGNPG +Y + RHN+GFM + F+ KK AEI EG+L G R I
Sbjct: 7 LVIGLGNPGPQYEKTRHNVGFMVAGTLAGRMGGKFNVH----KKSGAEIVEGRLAGRRVI 62
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP+++MNLSG ++ + F+ + + N +V+HD+LDLDFGT+RLK GGG+ GHNGL+S
Sbjct: 63 LGKPRSYMNLSGGAVAGLARFFSV-DAANIIVVHDELDLDFGTIRLKLGGGEGGHNGLRS 121
Query: 118 ISEK-CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
IS K+Y R R+GIGRPP +VL FSS ER L + + A ++
Sbjct: 122 ISSSLTTKDYLRTRVGIGRPPGRMDPADYVLKPFSSTERKELDLVCEEAADAV 174
>gi|302330398|gb|ADL20592.1| Peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis 1002]
Length = 186
Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 94/158 (59%), Gaps = 6/158 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPA---WKKKFHAEISEGQLDGLRTI 57
F++ GLGNPG +Y RHN+G+M ID + + PA KK + ++ ++ + I
Sbjct: 5 FLIVGLGNPGPQYATTRHNVGYMAIDELLTRASPMPARLSAHKKTNMMAAKTRIGNTKVI 64
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L P+ FMNLSG + + NF+ +P +V+ DDL+L+F ++ K GGGD GHNGL+S
Sbjct: 65 LATPRCFMNLSGGPVRSIANFFNIPP-SRVIVLFDDLELNFSEVKAKIGGGDHGHNGLRS 123
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+++ G K+Y R+ IGIGRPP VL FS E
Sbjct: 124 VTQSLGTKDYFRVGIGIGRPPGRMEPKTFVLKPFSKKE 161
>gi|291545189|emb|CBL18298.1| peptidyl-tRNA hydrolase [Ruminococcus sp. 18P13]
Length = 206
Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 96/155 (61%), Gaps = 3/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY + RHN GFM +D + + KF + + + G R +L+KP
Sbjct: 21 YLIVGLGNPGLEYAQTRHNAGFMTLDLLAEREHTEIKRMKFKSLCGDAVIAGKRCLLMKP 80
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ E M FYKLP +++ +V++DD+ L+ LR++ G D GHNG+KSI
Sbjct: 81 TTYMNNSGQAVAEAMQFYKLP-IDHIIVVYDDISLEPSRLRIRRKGSDGGHNGIKSIIYL 139
Query: 122 CGKN-YKRLRIGIGRPPDTAH-IIRHVLGNFSSPE 154
G++ + R+++G+G+ P + + VL F+ E
Sbjct: 140 TGEDTFPRIKLGVGKKPRPDYNLADWVLSRFTKEE 174
>gi|257064879|ref|YP_003144551.1| peptidyl-tRNA hydrolase [Slackia heliotrinireducens DSM 20476]
gi|256792532|gb|ACV23202.1| peptidyl-tRNA hydrolase [Slackia heliotrinireducens DSM 20476]
Length = 190
Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 93/156 (59%), Gaps = 4/156 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF + + WK + A ++ G +L K
Sbjct: 1 MRLIVGLGNPGEEYDHTRHNAGFDTVSLLAEELRVNYWKTECGALTAKTTYRGEDVLLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ+FMN+SG + ++ Y++ + +VIHD+LD+D GT+R+K GGG AGHNGLKSI
Sbjct: 61 PQSFMNVSGGPVKQLCAKYEVDPKTDLIVIHDELDIDPGTIRVKFGGGLAGHNGLKSIDA 120
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K +++ R+RIGIGRPP + VL S P++
Sbjct: 121 KLQTRDWLRIRIGIGRPPGRMPVTDWVL---SKPKK 153
>gi|183598957|ref|ZP_02960450.1| hypothetical protein PROSTU_02399 [Providencia stuartii ATCC 25827]
gi|188021171|gb|EDU59211.1| hypothetical protein PROSTU_02399 [Providencia stuartii ATCC 25827]
Length = 196
Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 95/173 (54%), Gaps = 4/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + L+G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEEAKFFGYTARINLNGNDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+L V NFY++ N + LV HD+LDL G ++K GG + GHNGLK I K
Sbjct: 66 TTFMNLSGKSVLAVANFYRI-NPDEILVAHDELDLPPGVAKMKLGGSNGGHNGLKDIQNK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
N+ RLRIGIG P D ++ VLG + E+ + ID R +L
Sbjct: 125 FSNNPNFYRLRIGIGHPGDKNKVVGFVLGKPPASEQKLIDEAIDESLRCTDIL 177
>gi|116333177|ref|YP_794704.1| peptidyl-tRNA hydrolase [Lactobacillus brevis ATCC 367]
gi|122270134|sp|Q03SZ9|PTH_LACBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116098524|gb|ABJ63673.1| peptidyl-tRNA hydrolase [Lactobacillus brevis ATCC 367]
Length = 185
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 95/156 (60%), Gaps = 3/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN GFM +D H +K A G ++G + +++K
Sbjct: 1 MKMIVGLGNIGPQYDNTRHNTGFMVVDAFAQQHGIALTTRKMDARFGSGLVNGEKVLVVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ +M+++K+ ++ + +V+ DD+DL G +RL+ G GHNG+KSI
Sbjct: 61 PTTFMNESGRAVHPIMDYFKI-DVADVMVVQDDMDLPLGRIRLRDHGSAGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G +N+ RL++GI P ++ +VLG F++ +R
Sbjct: 120 HVGTQNFGRLKVGIAHPQQHT-VVDYVLGKFTTDQR 154
>gi|148270295|ref|YP_001244755.1| peptidyl-tRNA hydrolase [Thermotoga petrophila RKU-1]
gi|166229463|sp|A5ILV6|PTH_THEP1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|147735839|gb|ABQ47179.1| peptidyl-tRNA hydrolase [Thermotoga petrophila RKU-1]
Length = 186
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 100/172 (58%), Gaps = 6/172 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG Y RHN+GF+ +D + S WK + + S +L G L+KP
Sbjct: 1 MVVVGLGNPGPRYAFTRHNVGFLFLDFLKS----KDWKTEKYFAWSRIKLAGNDVALVKP 56
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ V+ F+ + ++ +V++DD+ L G +R++ G D GHNG+KSI +
Sbjct: 57 LTYMNLSGLAMPHVLKFFN-ASPDDIIVVYDDVSLKLGRIRIRKKGSDGGHNGMKSIIQA 115
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + KR+R+GIG P+ ++ VLG FS E L + + + +L ++
Sbjct: 116 LGTQEIKRIRVGIGDKPEGMDLVDFVLGEFSDEEWIILNKVFEVMKEALEVI 167
>gi|120612259|ref|YP_971937.1| peptidyl-tRNA hydrolase [Acidovorax citrulli AAC00-1]
gi|166199296|sp|A1TT75|PTH_ACIAC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|120590723|gb|ABM34163.1| peptidyl-tRNA hydrolase [Acidovorax citrulli AAC00-1]
Length = 213
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 6 GLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
GLGNPG +Y RHN GF ID R H P ++ +H ++ ++G L++PQ
Sbjct: 7 GLGNPGPDYDATRHNAGFWWIDGLARDLKVHLVP--ERAYHGLVARANVNGQSVWLLQPQ 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S+ + F+K+ E LV HD+LD+ G +LK GG AGHNGL+ I +
Sbjct: 65 TFMNLSGKSVAALARFFKIQPQE-ILVAHDELDILPGQAKLKRGGSHAGHNGLRDIHAQL 123
Query: 123 GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +Y RLRIGIG P A + VL S R I D+IA SL
Sbjct: 124 GSPDYWRLRIGIGHPGVKAEVANWVLKKPSPDHRTL---IEDSIAHSL 168
>gi|189462543|ref|ZP_03011328.1| hypothetical protein BACCOP_03233 [Bacteroides coprocola DSM 17136]
gi|189430704|gb|EDU99688.1| hypothetical protein BACCOP_03233 [Bacteroides coprocola DSM 17136]
Length = 187
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 93/161 (57%), Gaps = 9/161 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM +D + +K + + L G + IL+KP
Sbjct: 3 YLIVGLGNIGAEYHETRHNIGFMVLDALAKASNI-VFKDGRYGATATLSLKGKQLILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M K+P LEN L++ DDL L G+LRLK G DAGHNGLK I+
Sbjct: 62 STYMNLSGNAVRYWMQQEKIP-LENVLIVVDDLALPSGSLRLKGKGSDAGHNGLKHIAAT 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSS------PER 155
G +NY RLR GIG I +VLG F+ PER
Sbjct: 121 LGTQNYARLRFGIGNEFPKGGQIDYVLGKFNDDDMKLMPER 161
>gi|326803013|ref|YP_004320831.1| aminoacyl-tRNA hydrolase [Aerococcus urinae ACS-120-V-Col10a]
gi|326651183|gb|AEA01366.1| aminoacyl-tRNA hydrolase [Aerococcus urinae ACS-120-V-Col10a]
Length = 187
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 97/160 (60%), Gaps = 2/160 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY RHNIGF+ ++ H + F+ + ++ + I +K
Sbjct: 1 MKLVVGLGNPGKEYEGTRHNIGFIVLNEWAYRHHESFDRSAFNGVYFKRRVANDQVIFVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQ + MN+Y + +LE+ LV++DD+D++ G LRL+ G GHNG+K I +
Sbjct: 61 PTTFMNLSGQCVSGFMNYYHI-DLEDLLVVYDDMDMEPGRLRLRKKGSAGGHNGMKDIIK 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL 159
K+ +R+++G+G P ++ HVLG FS ++ +L
Sbjct: 120 MLNSKDIQRIKLGVGHPKGKGSVVNHVLGKFSKEDQGKML 159
>gi|54026867|ref|YP_121109.1| peptidyl-tRNA hydrolase [Nocardia farcinica IFM 10152]
gi|68052906|sp|Q5YPZ6|PTH_NOCFA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54018375|dbj|BAD59745.1| putative peptidyl-tRNA hydrolase [Nocardia farcinica IFM 10152]
Length = 193
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 108/174 (62%), Gaps = 7/174 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF---HFFPAWKKKFHAEISEGQLDGLRTILI 59
+V GLGNPG EY RHN+GF+ D + F A KK A++ + +LDG + ++
Sbjct: 10 LVVGLGNPGSEYERTRHNVGFLVADVLAERVGDRF--AVHKKSGADLLQARLDGRQVLIA 67
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+++MNLSG+ + + F+ +P E +V+HD+LDL FG +RLK GGG+ GHNGL+SIS
Sbjct: 68 KPRSYMNLSGRPVAALARFFSVPPTE-VIVVHDELDLPFGAVRLKRGGGEGGHNGLRSIS 126
Query: 120 EK-CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
K+Y R RIGIGRPP VL F++ ER + I++ A ++ LL
Sbjct: 127 SALTTKDYLRTRIGIGRPPGRQDPADFVLKPFAAAERKEVPVIVEQAADAVELL 180
>gi|307721572|ref|YP_003892712.1| peptidyl-tRNA hydrolase [Sulfurimonas autotrophica DSM 16294]
gi|306979665|gb|ADN09700.1| peptidyl-tRNA hydrolase [Sulfurimonas autotrophica DSM 16294]
Length = 184
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 102/172 (59%), Gaps = 8/172 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT-ILIK 60
++ GLGNPG +Y RHNIGFM +D + H K + +G+L + L+K
Sbjct: 1 MLIVGLGNPGSDYENTRHNIGFMVVDELIRRHN----AVKLSSSSFQGELYKFQNHFLLK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+++V FYKL E+ +VIHDDLDL FG LR K GGG GHNGLKSI
Sbjct: 57 PLTYMNLSGESVIKVKQFYKL---EDVVVIHDDLDLSFGALRFKKGGGHGGHNGLKSIDS 113
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
K + Y R+R+GIG+P I +VL F+ E+ L I+ ++ L
Sbjct: 114 KISREYIRVRMGIGKPEHKGEIASYVLSPFNQTEQKCLQEWINKSCDAVEFL 165
>gi|281423252|ref|ZP_06254165.1| aminoacyl-tRNA hydrolase [Prevotella oris F0302]
gi|281402588|gb|EFB33419.1| aminoacyl-tRNA hydrolase [Prevotella oris F0302]
Length = 190
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 94/165 (56%), Gaps = 8/165 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTIL 58
F++ GLGNPG EY + RHN GFM +D + + HF + K + I+E + G + IL
Sbjct: 4 FLICGLGNPGDEYQDTRHNTGFMVLDAFAKASNIHF----EDKRYGYIAETTIKGRKFIL 59
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP TFMNLSG ++ +N + + LVI DD+ L G RLK G + GHNGL +I
Sbjct: 60 LKPTTFMNLSGNAVRYWLNKENIVQ-SHLLVISDDIALPLGAFRLKANGSNGGHNGLGNI 118
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+ G++Y RLR+GIG + VLG + + E L P ID
Sbjct: 119 QQLIGQDYARLRMGIGNEYPKGGQVDWVLGKYDADEMKRLQPSID 163
>gi|157412610|ref|YP_001483476.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9215]
gi|167011996|sp|A8G2Q9|PTH_PROM2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157387185|gb|ABV49890.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9215]
Length = 200
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 110/195 (56%), Gaps = 12/195 (6%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG ++ +RHNIGF+ ++ + ++ +F +K K + SE Q+D L
Sbjct: 6 LIGLGNPGKKFLNSRHNIGFLLLEYFSKKYNSNFL--FKDKLKSSYSEFQIDNSSYRLFL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++++YK+ NL+ +I DD DL G +R + G GHNGLKSI E
Sbjct: 64 PNTFMNNSGYAVRAIVDWYKI-NLDQIFIIVDDKDLPLGKIRFRRKGSSGGHNGLKSIIE 122
Query: 121 KC-GKNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ + +KR+RIGIG PP + I HVLGN S E+ L + + SL L
Sbjct: 123 QLQTQKFKRIRIGIGSPPPIKGEKNFNTISHVLGNISLEEKSILDKVFRRVIESLEKLNT 182
Query: 175 REDVSFLNHIVSVRK 189
+++ +N + S K
Sbjct: 183 KKEEYIINELNSFDK 197
>gi|218248401|ref|YP_002373772.1| aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 8801]
gi|257061467|ref|YP_003139355.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 8802]
gi|218168879|gb|ACK67616.1| Aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 8801]
gi|256591633|gb|ACV02520.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 8802]
Length = 202
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 103/175 (58%), Gaps = 10/175 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTI-LIK 60
++ GLGNP +Y + RHNIGF ID + ++ ++F +EG G I L+K
Sbjct: 12 LIIGLGNPEVKYDKTRHNIGFEVIDALAETWQLSLKENRRFQGLFAEGMARGNHKIYLLK 71
Query: 61 PQTFMNLSGQSLLEVMNFYKL-PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SGQS+ V ++YKL PN + LVI+DD+DL G +R++ G GHNG+KSI
Sbjct: 72 PLTYMNRSGQSVRAVSDWYKLYPN--SMLVIYDDMDLPVGRMRMRLEGSAGGHNGMKSII 129
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPI----IDNIARSL 169
G +++ RLR+GIG+ + I HVLG F+ E+ + + +D + SL
Sbjct: 130 SHVGSQDFPRLRLGIGKSNQSKETISHVLGKFAPQEQEIIAKVLSLAVDAVEMSL 184
>gi|300774880|ref|ZP_07084743.1| aminoacyl-tRNA hydrolase [Chryseobacterium gleum ATCC 35910]
gi|300506695|gb|EFK37830.1| aminoacyl-tRNA hydrolase [Chryseobacterium gleum ATCC 35910]
Length = 187
Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 95/168 (56%), Gaps = 3/168 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF D+I F ++EG+ G + ++KP
Sbjct: 3 YLIVGLGNKGSEYENTRHNIGFKVADKIAETLEVSFNTSNFGC-LAEGKHKGRKVFVLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK+I+E
Sbjct: 62 DTYMNLSGNAVKYWMQKENIP-LENVLIVTDDLALPFGTLRLKGKGSDAGHNGLKNINEV 120
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
+NY RLR GI + +VLG ++ E L I+ +++
Sbjct: 121 LQTQNYARLRFGISADFAAGRQVDYVLGTWNEEEAEKLTERIETFSKA 168
>gi|255036436|ref|YP_003087057.1| peptidyl-tRNA hydrolase [Dyadobacter fermentans DSM 18053]
gi|254949192|gb|ACT93892.1| peptidyl-tRNA hydrolase [Dyadobacter fermentans DSM 18053]
Length = 186
Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 95/163 (58%), Gaps = 3/163 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGN G EY RHN GFM +DR+ + H F +K A ++E + G IKP
Sbjct: 3 YLIAGLGNIGPEYAFTRHNAGFMVLDRLAAQHDFKFSFEKL-AFVAEWKYKGRHIYFIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ M+ YK+ EN L I D+L L FGTLR+K G GHNGLK+I E
Sbjct: 62 TTYMNLSGKSIRYYMDQYKV-QAENTLTIVDELQLPFGTLRIKPKGSHGGHNGLKNIEEI 120
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G Y RLR GIG + +VL FS+ E L I+D
Sbjct: 121 IGTTEYPRLRFGIGNNFPRGRQVDYVLKPFSNEEMAELPIILD 163
>gi|318042729|ref|ZP_07974685.1| peptidyl-tRNA hydrolase [Synechococcus sp. CB0101]
Length = 216
Score = 117 bits (293), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 103/171 (60%), Gaps = 14/171 (8%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y RHN+GFM ++R+ + ++K+ K H ++E + R L+
Sbjct: 12 LLVGLGNPGDKYAGTRHNVGFMALERLAA-EAGGSFKQQNKLHGLLAEVGVGAQRLRLLM 70
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
PQTFMN SG+S+ ++++ L ++ LV+ DD+DL G LRL+T GG GHNGL+S I+
Sbjct: 71 PQTFMNDSGRSIRAALDWFGLDPVQ-ILVLVDDMDLPLGRLRLRTSGGAGGHNGLRSTIA 129
Query: 120 EKCGKNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNI 165
G+ + RLRIGIG P + HVLG F + E+ P++D +
Sbjct: 130 HLGGQEFPRLRIGIGAPALNPVERKQRTVGHVLGRFDAAEQ----PVLDQV 176
>gi|261416826|ref|YP_003250509.1| peptidyl-tRNA hydrolase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373282|gb|ACX76027.1| peptidyl-tRNA hydrolase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 184
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 99/176 (56%), Gaps = 11/176 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA--WKKKFHAEISEGQLDGLRTIL 58
M+++ GLGNPG +Y HN GFM ++++ P+ WK + A + + G +L
Sbjct: 1 MYLIVGLGNPGTQYSNTHHNAGFMAVEKLAD----PSKDWKSEHKALTMKVNIAGEECLL 56
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KPQT+MNLSG+++ +M +YK+ +++ LV DD++LD G +R + G G NGL++I
Sbjct: 57 VKPQTYMNLSGEAVQALMTWYKV-KVDHLLVFSDDINLDVGRIRCRKDGSHGGQNGLRNI 115
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
E G + R+R G+G+ P + VL FS +R P D +P L +
Sbjct: 116 IEHVGDKFPRIRFGVGKCPPKFDLSNWVLAKFSPEDR----PKFDEAIAKVPALVE 167
>gi|199598793|ref|ZP_03212205.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus HN001]
gi|199590298|gb|EDY98392.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus HN001]
Length = 183
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 97/162 (59%), Gaps = 7/162 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y +HN+GFM +D + K +F A + ++D + L+KPQ
Sbjct: 1 MIVGLGNPGRQYAGTKHNMGFMVVDGLAQRMGLTLNKLEFDAATATTRVDDEKVFLVKPQ 60
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG+++ ++M +Y++ L+ LV+HDD+DL G LRL+ G GHNG+K I
Sbjct: 61 TYMNASGRAVRQLMMYYQI-RLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIISAT 119
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G + + RL+IGI + P ++ VL F+ ++ P+ID
Sbjct: 120 GSDEFYRLKIGI-QHPQRQRVVDWVLTPFAKTDQ----PVID 156
>gi|225867623|ref|YP_002743571.1| peptidyl-tRNA hydrolase [Streptococcus equi subsp. zooepidemicus]
gi|259535247|sp|C0MC67|PTH_STRS7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|225700899|emb|CAW97561.1| peptidyl-tRNA hydrolase [Streptococcus equi subsp. zooepidemicus]
Length = 189
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 97/169 (57%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HN+GFM +DR + K F A + ++ + +KP
Sbjct: 4 MIVGLGNPGSKYQQTKHNVGFMAVDRLVKDLDISFTEDKTFKALVGSTFINQEKIYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG + ++ +Y + ++ +VI+DDLD+ G +RL+ G GHNG+KSI
Sbjct: 64 TTFMNNSGLVVRALLTYYNIST-KDLMVIYDDLDMAVGKIRLRQKGSAGGHNGIKSIIAH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R++IGIGRP +I HVLG F + + + +D + +++
Sbjct: 123 IGTQEFDRVKIGIGRPSHGMSVINHVLGKFDTDDMITINIALDKVDKAI 171
>gi|218129917|ref|ZP_03458721.1| hypothetical protein BACEGG_01500 [Bacteroides eggerthii DSM 20697]
gi|217988027|gb|EEC54352.1| hypothetical protein BACEGG_01500 [Bacteroides eggerthii DSM 20697]
Length = 187
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 91/154 (59%), Gaps = 3/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM D + A+K + + + G + IL+KP
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMVADALAK-EAGTAFKDGRYGFTTTLSIKGRQLILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STFMNLSGNAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +NY RLR GIG + VLG+F+ +
Sbjct: 121 LGTQNYARLRFGIGNDFPRGGQVDFVLGHFTDED 154
>gi|289551699|ref|YP_003472603.1| Peptidyl-tRNA hydrolase [Staphylococcus lugdunensis HKU09-01]
gi|315660331|ref|ZP_07913184.1| aminoacyl-tRNA hydrolase [Staphylococcus lugdunensis M23590]
gi|289181230|gb|ADC88475.1| Peptidyl-tRNA hydrolase [Staphylococcus lugdunensis HKU09-01]
gi|315494620|gb|EFU82962.1| aminoacyl-tRNA hydrolase [Staphylococcus lugdunensis M23590]
Length = 190
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 110/187 (58%), Gaps = 5/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF +D + + F K+KF + ++ + + I+
Sbjct: 1 MKCIVGLGNIGKRFEHTRHNIGFEVVDYLLDKYNFNLDKQKFKGAYTIERIGNDKVMFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSGQ++ +M++Y + ++ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGQAVGPLMDYYNVA-IDELIVLYDDLDLNQGQVRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + +KR+RIG+GRP + + +VL FS E + ++++ A+++ D S
Sbjct: 120 HLGTEQFKRIRIGVGRPTNGMSVPDYVLQKFSKEEMMTMDHVVEHAAQAVEAFI---DTS 176
Query: 180 FLNHIVS 186
+H+++
Sbjct: 177 RFDHVMN 183
>gi|297562916|ref|YP_003681890.1| peptidyl-tRNA hydrolase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847364|gb|ADH69384.1| peptidyl-tRNA hydrolase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 221
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 104/158 (65%), Gaps = 4/158 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG +Y NRHN GF+ ++ + + A K HAE+ E +LDG+ +L KP
Sbjct: 37 WLVVGLGNPGPKYAGNRHNAGFLVVEALAGGERWKA--HKAHAEVVETRLDGVPVVLAKP 94
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
++FMNLSG + + FYK+P +E +V+HD++D+DFG L+LK GGG GHNGLKS++
Sbjct: 95 RSFMNLSGGPVSGLARFYKVP-VERIVVVHDEMDIDFGALKLKKGGGPGGHNGLKSMTSS 153
Query: 122 -CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+Y R+R G+GRPP +VL +FSS ER L
Sbjct: 154 LSSPDYIRVRFGVGRPPGRMDPAAYVLKDFSSTERAEL 191
>gi|294339320|emb|CAZ87676.1| peptidyl-tRNA hydrolase (PTH) [Thiomonas sp. 3As]
Length = 206
Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 99/178 (55%), Gaps = 7/178 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG E+ +RHN GF +D+I + P ++ F +++ +L G L+
Sbjct: 4 LLVGLGNPGQEHALDRHNAGFWLVDQIATAAGVSLKP--ERGFFGDVARVRLQGHELWLL 61
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+P T+MN SGQS+ FYK+ EN LV HD+LDL G +LK GGG AGHNGL+ +
Sbjct: 62 EPSTYMNRSGQSVGAFARFYKIAP-ENILVAHDELDLPPGQAKLKLGGGHAGHNGLRDLI 120
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G N+ RLR+GIG P D +I VLG E + ++ LP L K E
Sbjct: 121 AHLGTPNFWRLRLGIGHPGDRDAVIGFVLGKPPQSELKLIEQAMEQSQAVLPQLLKGE 178
>gi|317476862|ref|ZP_07936105.1| peptidyl-tRNA hydrolase [Bacteroides eggerthii 1_2_48FAA]
gi|316907037|gb|EFV28748.1| peptidyl-tRNA hydrolase [Bacteroides eggerthii 1_2_48FAA]
Length = 187
Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 91/154 (59%), Gaps = 3/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM D + A+K + + + G + IL+KP
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMVADALAK-EAGTAFKDGRYGFTTTLSIKGRQLILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STFMNLSGNAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +NY RLR GIG + VLG+F+ +
Sbjct: 121 LGTQNYARLRFGIGNDFPRGGQVDFVLGHFTDED 154
>gi|293395768|ref|ZP_06640050.1| aminoacyl-tRNA hydrolase [Serratia odorifera DSM 4582]
gi|291421705|gb|EFE94952.1| aminoacyl-tRNA hydrolase [Serratia odorifera DSM 4582]
Length = 196
Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 96/185 (51%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H P + KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLAQRHNQPLKEESKFFGYTARLNLAGHDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ + LV HD+LDL G +LK GG + GHNGLK I K
Sbjct: 66 TTFMNLSGKAVAAMATFYRI-QADEILVAHDELDLPPGVAKLKLGGSNGGHNGLKDIQSK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
N+ RLRIGIG P D ++ VLG + E+ + ID R LL K
Sbjct: 125 MANNPNFYRLRIGIGHPGDRNKVVGFVLGKPPASEQTLIDDAIDESLRCTELLLKEGMTK 184
Query: 180 FLNHI 184
+N +
Sbjct: 185 AMNRL 189
>gi|313203696|ref|YP_004042353.1| peptidyL-tRNA hydrolase [Paludibacter propionicigenes WB4]
gi|312443012|gb|ADQ79368.1| peptidyl-tRNA hydrolase [Paludibacter propionicigenes WB4]
Length = 187
Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 92/156 (58%), Gaps = 7/156 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH--SFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+++ GLGN G+EY + RHNIGF +D S FF + + E +L G IL+
Sbjct: 3 YLIVGLGNIGNEYQDTRHNIGFTILDAFAKASNVFFT---ENRYGSTCEVKLKGRTLILL 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG +L M K+ +EN LV+ DD+ L FGTLRLK G DAGHNGLK+I
Sbjct: 60 KPSTFMNLSGNALRYWMQKEKIA-IENVLVVVDDIALPFGTLRLKPQGSDAGHNGLKNIQ 118
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
E G NY RLR G+G + +VLG ++ +
Sbjct: 119 EILGHNNYPRLRFGVGNDFAKGRQVEYVLGKWTKEQ 154
>gi|167772370|ref|ZP_02444423.1| hypothetical protein ANACOL_03747 [Anaerotruncus colihominis DSM
17241]
gi|167665473|gb|EDS09603.1| hypothetical protein ANACOL_03747 [Anaerotruncus colihominis DSM
17241]
Length = 203
Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I GLGNPG +Y RHN GF ++RI + KF + ++ G R +L+KP
Sbjct: 18 WIAVGLGNPGRDYENTRHNAGFCAVERIAGKCGVKIDRLKFKSLCADTTFGGQRVLLMKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ E M FYK+P E LV+ DD+ LD G LR++ G D GHNG+K++
Sbjct: 78 STFMNCSGEAVREAMQFYKIP-AERVLVLFDDVSLDPGRLRIRRQGSDGGHNGIKNMIYL 136
Query: 122 CGKN-YKRLRIGIGRPPDTAH-IIRHVLGNF 150
GK+ + R++IG+G+ P + + VLG F
Sbjct: 137 TGKDTFPRIKIGVGKKPHPGYDLAAWVLGKF 167
>gi|149378001|ref|ZP_01895726.1| peptidyl-tRNA hydrolase [Marinobacter algicola DG893]
gi|149357710|gb|EDM46207.1| peptidyl-tRNA hydrolase [Marinobacter algicola DG893]
Length = 195
Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTI 57
+ +V GLGNPG +Y RHN G + ++ R P +KK+H + QL GL
Sbjct: 5 ILMVVGLGNPGPDYANTRHNAGALFVEALARETGQSLRP--EKKYHGLYARIQLQGLDLH 62
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+ P T+MN SG S+ + +F+K+ + LV HD+LD+ GT R K GG GHNGL+
Sbjct: 63 LLNPSTYMNRSGLSIKALADFFKI-QPQQILVAHDELDIPPGTARFKKSGGHGGHNGLRD 121
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G N ++RLRIGIG P D+ + +VLG E L +I+ I R LP A +
Sbjct: 122 TIAHLGTNEFQRLRIGIGHPGDSRQVTGYVLGRLGKRETEELNAVINEIIRVLPDAASGK 181
Query: 177 DVSFLNHIVSVR 188
+ +N + S +
Sbjct: 182 LPAAMNRLHSFK 193
>gi|300781624|ref|ZP_07091478.1| aminoacyl-tRNA hydrolase [Corynebacterium genitalium ATCC 33030]
gi|300533331|gb|EFK54392.1| aminoacyl-tRNA hydrolase [Corynebacterium genitalium ATCC 33030]
Length = 188
Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 100/169 (59%), Gaps = 10/169 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAW---KKKFHAEISE---GQLDGL 54
+V GLGNPG Y + RHN G M ID + PA KK + E++E G+L
Sbjct: 7 ILVVGLGNPGTIYAQTRHNAGAMVIDELLDRATPMPAQLSVHKKTNTEVAELAAGRLMPR 66
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
RTIL + + FMN+SG + + ++Y + + VI+D+LDLDFG +L+ GGGD GHNG
Sbjct: 67 RTILARTRGFMNVSGGPVKALASYYGTKPADIH-VIYDELDLDFGQFKLRLGGGDHGHNG 125
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
LKS+++ G +Y RL +GIGRPP +VL FS E + LPI+
Sbjct: 126 LKSVTKSLGTSDYHRLAVGIGRPPGRQAPADYVLKPFSKQE-FAELPIV 173
>gi|317507884|ref|ZP_07965582.1| peptidyl-tRNA hydrolase [Segniliparus rugosus ATCC BAA-974]
gi|316253813|gb|EFV13185.1| peptidyl-tRNA hydrolase [Segniliparus rugosus ATCC BAA-974]
Length = 181
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 98/179 (54%), Gaps = 21/179 (11%)
Query: 7 LGNPGHEYCENRHNIGFMCID----------RIHSFHFFPAWKKKFHAEISEGQLDGLRT 56
+GNPG +Y + RHN+G M +D R H A + FH G
Sbjct: 1 MGNPGAKYEKTRHNVGHMVVDLLVSRAGGSFRAHKTSGMLAAQLSFH---------GRAV 51
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
IL KP +MN+ G + ++ ++ +P + + +HD+LD+ FG +RLK GGG+AGHNGL+
Sbjct: 52 ILGKPTAYMNVCGPQIAKLARYFSVPP-TDVVAVHDELDIGFGLVRLKRGGGEAGHNGLR 110
Query: 117 SISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
S+S G K+Y R+R+G+GRPP VL F++ ER L +++ A ++ L +
Sbjct: 111 SLSSSLGTKDYARIRVGVGRPPVGMETADFVLAGFTAVERRELPDLVERSADAVEWLVR 169
>gi|329943159|ref|ZP_08291933.1| peptidyl-tRNA hydrolase [Chlamydophila psittaci Cal10]
gi|313848312|emb|CBY17315.1| peptidyl-tRNA hydrolase [Chlamydophila psittaci RD1]
gi|325507165|gb|ADZ18803.1| peptidyl-tRNA hydrolase [Chlamydophila psittaci 6BC]
gi|328814706|gb|EGF84696.1| peptidyl-tRNA hydrolase [Chlamydophila psittaci Cal10]
gi|328914995|gb|AEB55828.1| peptidyl-tRNA hydrolase [Chlamydophila psittaci 6BC]
Length = 183
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 97/159 (61%), Gaps = 9/159 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSF---HFFPAWKKKFHAEISEGQLDGLRTIL 58
+V +GNPG +Y RHNIGF+C+DR + F HF A K ++I++ + +
Sbjct: 4 LVVAIGNPGRQYIWTRHNIGFLCVDRLVQQFPGVHFKEA--PKLFSDIAKVESSQGSMVF 61
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
IKP+T++NLSG+++L V +Y + + LVI DD++ FG +RL+ G GH G+KSI
Sbjct: 62 IKPRTYVNLSGKAVLAVKGYYNIAT-DRILVIADDVNQPFGNIRLRQSAGGGGHKGIKSI 120
Query: 119 SEKCGKN-YKRLRIGIGRPP-DTAHIIRHVLGNFSSPER 155
++ G N Y +LR+GIGRP + + VLG F+ E+
Sbjct: 121 TQSLGSNDYWQLRLGIGRPQRENVELSDFVLGQFTEEEQ 159
>gi|241764086|ref|ZP_04762124.1| Aminoacyl-tRNA hydrolase [Acidovorax delafieldii 2AN]
gi|241366617|gb|EER61098.1| Aminoacyl-tRNA hydrolase [Acidovorax delafieldii 2AN]
Length = 202
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 94/166 (56%), Gaps = 6/166 (3%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTF 64
GLGNPG +Y RHN GF ID + H ++ +H ++ + G L++PQTF
Sbjct: 7 GLGNPGPDYEATRHNAGFWWIDALAHELKATLVPERSYHGLVARTSVHGQSVWLLQPQTF 66
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK 124
MNLSG+S+ + F+K+ E LV HD+LD+ G ++LK GG AGHNGL+ I + G
Sbjct: 67 MNLSGKSVAALARFFKI-QPEEILVAHDELDIPPGQVKLKRGGSHAGHNGLRDIHAQLGS 125
Query: 125 -NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+Y RLRIGIG P A + VL S +R I D+I SL
Sbjct: 126 PDYWRLRIGIGHPGVKAEVANWVLKKPSPDQRTL---IEDSIEHSL 168
>gi|303234870|ref|ZP_07321495.1| aminoacyl-tRNA hydrolase [Finegoldia magna BVS033A4]
gi|302493988|gb|EFL53769.1| aminoacyl-tRNA hydrolase [Finegoldia magna BVS033A4]
Length = 189
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 96/164 (58%), Gaps = 3/164 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y RHN GFM ID + K KF + I EG + + IL+K
Sbjct: 1 MYLIAGLGNPGSKYEYTRHNAGFMVIDDLAKKLNIKVNKLKFKSLIGEGFIGNEKVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++L+ N+Y L EN +VI DD+D+ FGT+R+K G HNGLKSI
Sbjct: 61 PSTYMNDSGKAILDCFNYYNLS-AENLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+++ R+++ +G+ D + VL FS E L ID
Sbjct: 120 LIQSQDFARIKVSVGQ-NDKYDLKDFVLSQFSKKEFEVLEKEID 162
>gi|81429217|ref|YP_396218.1| peptidyl-tRNA hydrolase [Lactobacillus sakei subsp. sakei 23K]
gi|119390954|sp|Q38V72|PTH_LACSS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78610860|emb|CAI55912.1| Aminoacyl-tRNA hydrolase (Peptidyl-tRNA hydrolase) [Lactobacillus
sakei subsp. sakei 23K]
Length = 185
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 102/178 (57%), Gaps = 3/178 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HNIGFM ID++ + K F AE + +G +L+K
Sbjct: 1 MKMIVGLGNPGSKYAKTKHNIGFMVIDQLCEKYNVTLNKHDFEAEYGSFKYEGETVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P TFMN SG+S+ +M++Y++ ++ LVI DD+DL G LRL+ G GHNG+KS I+
Sbjct: 61 PLTFMNDSGRSVGPLMSYYQV-GIDELLVIQDDMDLTMGKLRLRQKGSAGGHNGIKSIIA 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+ +KRL+IGI + P + ++ VL F + ID ++ + +D
Sbjct: 120 HTKSQTFKRLKIGI-QHPQKSTVVNWVLTPFDKDGAPVINQAIDQACEAIDDWCQNDD 176
>gi|58336611|ref|YP_193196.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus NCFM]
gi|227903168|ref|ZP_04020973.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus ATCC 4796]
gi|68052870|sp|Q5FMA9|PTH_LACAC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|58253928|gb|AAV42165.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus NCFM]
gi|227868973|gb|EEJ76394.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus ATCC 4796]
Length = 185
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 3/164 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y + +HN GFM +D K KF ++ +++G I ++
Sbjct: 1 MKIIAGLGNPGQKYDKTKHNTGFMTMDHYLDKKGLTLNKDKFEGHWTKEKINGEDVIFLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++ NF+K+ E+ L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNESGRSVSQIANFFKVA-PEDVLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G + + RL+IGI R P A ++ VL F+ ++ + D
Sbjct: 120 DLGTEKFNRLKIGI-RHPKNATVVSWVLTPFNDEQQKLMDDAFD 162
>gi|116751072|ref|YP_847759.1| peptidyl-tRNA hydrolase [Syntrophobacter fumaroxidans MPOB]
gi|116700136|gb|ABK19324.1| peptidyl-tRNA hydrolase [Syntrophobacter fumaroxidans MPOB]
Length = 201
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
V GLGNPG +Y RHN GFM +DR+ + ++KF A G ++G + +L KP T
Sbjct: 14 VVGLGNPGPQYEHTRHNAGFMVVDRLAAGFGIAMQERKFRASWGTGFVEGRKVLLAKPLT 73
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
+MNLSG ++ E++ ++ P+ E LV+HDDLDL G +RL GG GH G+ SI
Sbjct: 74 YMNLSGAAVGEILKYFGFPS-ERVLVVHDDLDLPCGRVRLARKGGAGGHKGIASIMAHLN 132
Query: 124 -KNYKRLRIGIGRP 136
+++ RL++GIGRP
Sbjct: 133 TRDFPRLKLGIGRP 146
>gi|117924130|ref|YP_864747.1| peptidyl-tRNA hydrolase [Magnetococcus sp. MC-1]
gi|117607886|gb|ABK43341.1| peptidyl-tRNA hydrolase [Magnetococcus sp. MC-1]
Length = 239
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 99/160 (61%), Gaps = 2/160 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y E RHN+G+ +D I + PA +F G + G + + P+
Sbjct: 4 LLVGLGNPGEKYRETRHNLGWDAMDAICYTYGLPAPSSRFKGRFGSGVVQGEKLYWLLPE 63
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S+ E +Y++ +N +V HDD+DL G +++K GGG GHNGLKSI +
Sbjct: 64 TFMNLSGESVSEAARYYQI-EPKNVIVFHDDMDLALGKIKMKVGGGHGGHNGLKSIQQHL 122
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPI 161
G ++ R+R+GIGRPP +VL +F+ ER ++P+
Sbjct: 123 GTADFVRVRLGIGRPPAKWDPANYVLSSFTKEERDVVMPV 162
>gi|256819861|ref|YP_003141140.1| peptidyl-tRNA hydrolase [Capnocytophaga ochracea DSM 7271]
gi|256581444|gb|ACU92579.1| peptidyl-tRNA hydrolase [Capnocytophaga ochracea DSM 7271]
Length = 188
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 96/160 (60%), Gaps = 4/160 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++A LGN G EY RHNIGF+ D + H +K +++E ++ G IL+KP
Sbjct: 4 YLIACLGNIGAEYANTRHNIGFLVADTLVKDHNASFTTQKL-GDLAEIKVKGRTFILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M +P LEN LVI DDL++ FGT+R+K G D GHNGLK I +
Sbjct: 63 STYMNLSGKAVRYWMEKENIP-LENLLVICDDLNIPFGTIRIKGKGSDGGHNGLKDIQAQ 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLP 160
+ Y RLR GI ++ I +VLG + +PE LLP
Sbjct: 122 LNTQQYARLRFGISSNFESGRQIDYVLGEW-APEEQTLLP 160
>gi|281420708|ref|ZP_06251707.1| aminoacyl-tRNA hydrolase [Prevotella copri DSM 18205]
gi|281405481|gb|EFB36161.1| aminoacyl-tRNA hydrolase [Prevotella copri DSM 18205]
Length = 190
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 91/165 (55%), Gaps = 8/165 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTIL 58
+++ GLGNPG EY RHN GFM +D + + HF + K + ++E L G + L
Sbjct: 4 YLICGLGNPGDEYAGTRHNTGFMVLDAFAKASNIHF----EDKRYGFVAETTLKGRKIFL 59
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP TFMNLSG ++ +N K+ LVI D+L L G RLK G + GHNGL I
Sbjct: 60 LKPTTFMNLSGNAVRYWLNQEKIDQ-SRLLVISDELALPLGAFRLKANGSNGGHNGLGHI 118
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+ G+NY RLR+GIG I VLG ++ + L P ID
Sbjct: 119 QQLIGQNYARLRMGIGNDYPRGGQIDWVLGKYTEEDMKQLQPAID 163
>gi|34558362|ref|NP_908177.1| peptidyl-tRNA hydrolase [Wolinella succinogenes DSM 1740]
gi|46576697|sp|Q7M7U8|PTH_WOLSU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|34484081|emb|CAE11077.1| PEPTIDYL-TRNA HYDROLASE [Wolinella succinogenes]
Length = 192
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/153 (50%), Positives = 93/153 (60%), Gaps = 10/153 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEI-SEGQLDGLRTIL 58
M +V GLGNPG Y RHNIGF ID + A K F E+ EG+ +
Sbjct: 1 MVLVVGLGNPGKTYESTRHNIGFRVIDALLERRSALNATKSTFKGELHKEGE-----NLF 55
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG+S L V FYK E LVIHDDLDL FG +RLK GGG+ GHNGLKS+
Sbjct: 56 LKPTTYMNLSGESALPVSTFYK---PEKILVIHDDLDLPFGAIRLKRGGGNGGHNGLKSL 112
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFS 151
+ G +Y RLRIGIG+PP + +VL FS
Sbjct: 113 DKLLGNDYYRLRIGIGKPPLGWEVADYVLARFS 145
>gi|169824177|ref|YP_001691788.1| peptidyl-tRNA hydrolase [Finegoldia magna ATCC 29328]
gi|238687728|sp|B0S0D9|PTH_FINM2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|167830982|dbj|BAG07898.1| peptidyl-tRNA hydrolase [Finegoldia magna ATCC 29328]
Length = 189
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 96/164 (58%), Gaps = 3/164 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y RHN GFM ID + K KF + I EG + + IL+K
Sbjct: 1 MYLIAGLGNPGSKYEYTRHNAGFMVIDDLAKKLNIKVNKLKFKSLIGEGFIGDEKVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++L+ N+Y L EN +VI DD+D+ FGT+R+K G HNGLKSI
Sbjct: 61 PSTYMNDSGKAILDCFNYYNLS-AENLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+++ R+++ +G+ D + VL FS E L ID
Sbjct: 120 LIESQDFARIKVSVGQ-NDKYDLKDFVLSQFSKKEFEVLEKEID 162
>gi|62185393|ref|YP_220178.1| peptidyl-tRNA hydrolase [Chlamydophila abortus S26/3]
gi|81312457|sp|Q5L564|PTH_CHLAB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|62148460|emb|CAH64230.1| peptidyl-tRNA hydrolase [Chlamydophila abortus S26/3]
Length = 183
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 97/159 (61%), Gaps = 9/159 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSF---HFFPAWKKKFHAEISEGQLDGLRTIL 58
+V +GNPG +Y RHN+GF+C+DR + F HF A K ++I++ + +
Sbjct: 4 LVVAIGNPGRQYVWTRHNVGFLCVDRLVQQFPGVHFKEA--PKLFSDIAKVESSQGSMVF 61
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
IKP+T++NLSG+++L V +Y + + LVI DD++ FG +RL+ G GH G+KSI
Sbjct: 62 IKPRTYVNLSGKAVLAVKGYYNIAT-DRILVIADDVNQPFGNVRLRQSAGGGGHKGIKSI 120
Query: 119 SEKCGKN-YKRLRIGIGRPP-DTAHIIRHVLGNFSSPER 155
++ G N Y +LR+GIGRP + + VLG F+ E+
Sbjct: 121 TQSLGSNDYWQLRLGIGRPQRENVELSDFVLGQFTEEEQ 159
>gi|332176728|gb|AEE12418.1| Peptidyl-tRNA hydrolase [Porphyromonas asaccharolytica DSM 20707]
Length = 186
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 99/185 (53%), Gaps = 6/185 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNP EY RHNIGF + + + W H EI+ G++ ++ L+KP
Sbjct: 4 YLIVGLGNPTEEYRGTRHNIGFRMVSHLADKQGW-TWSTARHGEITSGRIKNVQLTLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M K+P +++ L+ DDL L FGTLR+K GG GHNGLK I+E
Sbjct: 63 STYMNLSGTAVRYWMQELKIP-VDHILICLDDLALPFGTLRMKPGGSAGGHNGLKHITEL 121
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERY---FLLPIIDNIARSLPLLAKRED 177
G + Y RLR GIG I +VL F E LL +D + S L+
Sbjct: 122 LGTDRYPRLRFGIGHDYPRGKQIEYVLAQFPEGELADMPRLLERVDEMIESFCLMGVERT 181
Query: 178 VSFLN 182
++ N
Sbjct: 182 MNSFN 186
>gi|294790716|ref|ZP_06755874.1| aminoacyl-tRNA hydrolase [Scardovia inopinata F0304]
gi|294458613|gb|EFG26966.1| aminoacyl-tRNA hydrolase [Scardovia inopinata F0304]
Length = 200
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 103/181 (56%), Gaps = 12/181 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD--GLRT--I 57
+++ GLGNPG +Y RHNIGFMC D + + K A++ +G +D G R
Sbjct: 6 WLIVGLGNPGKKYEGTRHNIGFMCADLLAQRWSVSLSEHKGLAQLGKGIMDLGGRRQKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKL-PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
L KP TFMN SG ++ V ++Y + P E+ +VIHDD+DLDFG +++K GG GHNGLK
Sbjct: 66 LAKPLTFMNDSGDAVASVSSYYDIIP--EHIIVIHDDMDLDFGRIKVKNGGSPGGHNGLK 123
Query: 117 SISEKCGK-NYKRLRIGIGRPPDTAH----IIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
SI G Y R+R+G G H I+ VLG F+S ++ + + + A + +
Sbjct: 124 SIDRSLGTGGYNRVRLGTGHSQRGQHAHDNAIKWVLGGFASAQKSQMDDFLSDGADAAEM 183
Query: 172 L 172
+
Sbjct: 184 I 184
>gi|313887490|ref|ZP_07821179.1| aminoacyl-tRNA hydrolase [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923132|gb|EFR33952.1| aminoacyl-tRNA hydrolase [Porphyromonas asaccharolytica
PR426713P-I]
Length = 186
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 99/185 (53%), Gaps = 6/185 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNP EY RHNIGF + + + W H EI+ G++ ++ L+KP
Sbjct: 4 YLIVGLGNPTEEYRGTRHNIGFRMVSHLADKQGW-TWSTARHGEITSGRIKNVQLTLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M K+P +++ L+ DDL L FGTLR+K GG GHNGLK I+E
Sbjct: 63 STYMNLSGMAVRYWMQELKIP-VDHILICLDDLALPFGTLRMKPGGSAGGHNGLKHITEL 121
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERY---FLLPIIDNIARSLPLLAKRED 177
G + Y RLR GIG I +VL F E LL +D + S L+
Sbjct: 122 LGTDRYPRLRFGIGHDYPRGKQIEYVLAQFPEGELADMPRLLERVDEMIESFCLMGVERT 181
Query: 178 VSFLN 182
++ N
Sbjct: 182 MNSFN 186
>gi|302380851|ref|ZP_07269314.1| aminoacyl-tRNA hydrolase [Finegoldia magna ACS-171-V-Col3]
gi|302311346|gb|EFK93364.1| aminoacyl-tRNA hydrolase [Finegoldia magna ACS-171-V-Col3]
Length = 189
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 96/164 (58%), Gaps = 3/164 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y RHN GFM ID + K KF + I EG + + IL+K
Sbjct: 1 MYLIAGLGNPGSKYEYTRHNAGFMVIDDLAKKLNIKVNKLKFKSLIGEGFIGNEKVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++L+ N+Y L EN +VI DD+D+ FGT+R+K G HNGLKSI
Sbjct: 61 PSTYMNDSGKAILDCFNYYNLS-AENLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+++ R+++ +G+ D + VL FS E L ID
Sbjct: 120 LIESQDFARIKVSVGQ-NDKYDLKDFVLSQFSKNEFEVLEKEID 162
>gi|254458806|ref|ZP_05072230.1| peptidyl-tRNA hydrolase [Campylobacterales bacterium GD 1]
gi|207084572|gb|EDZ61860.1| peptidyl-tRNA hydrolase [Campylobacterales bacterium GD 1]
Length = 185
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 102/180 (56%), Gaps = 10/180 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT-ILIKP 61
++ GLGNPG Y NRHNIGFM ID + +K + G+L L+KP
Sbjct: 2 LIVGLGNPGPAYAGNRHNIGFMVIDEL----IRRNSAQKLSSSSFNGELFKFSNHFLLKP 57
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG S+L V FYK+ + +VIHDDLDL FGTLR K GGG GHNGLKS +
Sbjct: 58 LTYMNLSGNSILAVKKFYKV---DEVVVIHDDLDLPFGTLRFKHGGGHGGHNGLKSTDQM 114
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR--EDVS 179
++Y R+R+GIG+P + HVL +FS E L I ++ + + EDVS
Sbjct: 115 ISRDYARVRLGIGKPEHKGEVASHVLSDFSKTETEHLKTWISYTCEAVESMLENSLEDVS 174
>gi|94986155|ref|YP_605519.1| peptidyl-tRNA hydrolase [Deinococcus geothermalis DSM 11300]
gi|119390934|sp|Q1IWN4|PTH_DEIGD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|94556436|gb|ABF46350.1| Aminoacyl-tRNA hydrolase [Deinococcus geothermalis DSM 11300]
Length = 214
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 6/166 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE---GQLDGLRTI 57
M +V GLGNPG +Y + RHN+G++ +D + + + W AE++E G G + +
Sbjct: 1 MKLVVGLGNPGSQYAQTRHNVGWLVVDEV-ARRWGAVWHPDKDAEVAELRMGAAPGEKVL 59
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KPQTFMN SG+++ + FYKL LV+ DDLD FG L+ + GG G NG++
Sbjct: 60 LVKPQTFMNSSGRAVGPLFAFYKL-EPAALLVVQDDLDSPFGLLKFRLGGRHGGQNGVRD 118
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
I G +++ RL+IGI RPP + VL + + E L ++
Sbjct: 119 IIRVLGTQDFARLKIGISRPPAGWNPADWVLSRWRAEEAETLAELV 164
>gi|309812802|ref|ZP_07706540.1| putative peptidyl-tRNA hydrolase [Dermacoccus sp. Ellin185]
gi|308433219|gb|EFP57113.1| putative peptidyl-tRNA hydrolase [Dermacoccus sp. Ellin185]
Length = 210
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 115/192 (59%), Gaps = 11/192 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE-------GQLDGL 54
++V GLGNPG Y NRHN+G M ++R+ + K A +E G L G
Sbjct: 18 WLVVGLGNPGPRYAGNRHNVGAMVVERMAADAGVALRAHKARAAAAEIRLGTLPGGLPGP 77
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
+ +L P T+MN SG + +M F+K+P E +VIHD+LD+DFG +RLK GGG+ GHNG
Sbjct: 78 KVVLAVPSTYMNESGGPVSALMKFFKIPA-ERLVVIHDELDIDFGAVRLKFGGGEGGHNG 136
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
L+SIS+ G K+Y R+R+GIGRPP + VL +FS+ ER L +I + A ++ LL
Sbjct: 137 LRSISKSIGTKDYLRVRLGIGRPPGRMEVSDFVLKDFSATERRELDFLIPSGAEAVELLV 196
Query: 174 KR--EDVSFLNH 183
R +D L H
Sbjct: 197 HRGLDDAQNLVH 208
>gi|227497784|ref|ZP_03927970.1| aminoacyl-tRNA hydrolase [Actinomyces urogenitalis DSM 15434]
gi|226832784|gb|EEH65167.1| aminoacyl-tRNA hydrolase [Actinomyces urogenitalis DSM 15434]
Length = 198
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 95/165 (57%), Gaps = 8/165 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE-------GQLDGL 54
+++ GLGNP Y NRHN+G M ID + K K A+++E G G
Sbjct: 5 WLIIGLGNPEARYARNRHNVGHMVIDVLAGRAGSRLSKHKARAQVAEVRLGMAPGGAPGP 64
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R IL +P TFMNLSG + FY + N LVIHD+LDL TLRLK GGG+ GHNG
Sbjct: 65 RVILAEPATFMNLSGGPTAALAKFYGIDPATNLLVIHDELDLPAHTLRLKRGGGEGGHNG 124
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
L+SIS+ G +NY RLR+GIGRPP VL +F + ER L
Sbjct: 125 LRSISQAVGSRNYARLRVGIGRPPGRQDPADFVLSDFPARERAEL 169
>gi|329122082|ref|ZP_08250690.1| aminoacyl-tRNA hydrolase [Dialister micraerophilus DSM 19965]
gi|327466889|gb|EGF12405.1| aminoacyl-tRNA hydrolase [Dialister micraerophilus DSM 19965]
Length = 194
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 90/149 (60%), Gaps = 2/149 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY + RHNIGF ++ + WK ++EI +G + I K
Sbjct: 5 MKLIVGLGNPGKEYEKTRHNIGFDVLELFSHRNKLSLWKNFMNSEIVTVMNNGEKIIFAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-S 119
PQT+MN SG+S+ ++ +YK+ E+ VI DDLDL G +R++ G GHNGLKSI +
Sbjct: 65 PQTYMNNSGESIGDIAKYYKIE-PEDIWVICDDLDLPVGKVRIRKKGSAGGHNGLKSIMA 123
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLG 148
+N+ R R+GIG P + +I HVLG
Sbjct: 124 HLQSENFCRFRVGIGHPKNGHTVIEHVLG 152
>gi|291531664|emb|CBK97249.1| peptidyl-tRNA hydrolase [Eubacterium siraeum 70/3]
Length = 209
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 100/173 (57%), Gaps = 3/173 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN GFM D + K KF + I++ ++G I++KP
Sbjct: 24 YLIVGLGNPGTQYENTRHNAGFMAADTLAEKLGVQIKKLKFKSLIADCAIEGRHCIIMKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ E M+FYK+P +N LV++DD+ LD G R++ G D GHNG+KSI
Sbjct: 84 STFMNNSGEAVGEAMSFYKIPP-QNILVMYDDISLDVGRTRIRRKGSDGGHNGIKSIILH 142
Query: 122 CGKN-YKRLRIGIG-RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ + R++IG+G +P + VL F + L +DN A + L+
Sbjct: 143 TNSDAFPRIKIGVGAKPHPDFPLADWVLSGFKKEDGENLEKSLDNAAEAAKLI 195
>gi|262373269|ref|ZP_06066548.1| peptidyl-tRNA hydrolase [Acinetobacter junii SH205]
gi|262313294|gb|EEY94379.1| peptidyl-tRNA hydrolase [Acinetobacter junii SH205]
Length = 193
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++++ + + KFH GQ++G L+ P
Sbjct: 6 LIVGLGNPGKEYAQTRHNAGFWFVEQLADRYGISLKAEPKFHGFTGRGQIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS++ FY++ E L+ HD+LD+D G +RLKTGGG GHNGL+ I
Sbjct: 66 TTFMNRSGQSVVPFAKFYQV-TPEAILIAHDELDMDPGIIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG S E+ + ID+ + +L + +
Sbjct: 125 IGPNFHRLRIGIGHPGSKERVSGHVLGKAPSSEQDLMDAAIDHALSKVKMLVDGQVSQAM 184
Query: 182 NHI 184
N I
Sbjct: 185 NQI 187
>gi|85859732|ref|YP_461934.1| peptidyl-tRNA hydrolase [Syntrophus aciditrophicus SB]
gi|119391023|sp|Q2LUK5|PTH_SYNAS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|85722823|gb|ABC77766.1| peptidyl-tRNA hydrolase [Syntrophus aciditrophicus SB]
Length = 196
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 104/169 (61%), Gaps = 3/169 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y RHN GF +D++ + F A +G + G +L K
Sbjct: 1 MKLIVGLGNPGARYRFTRHNFGFFVLDQLAEDQDIMMSQTGFDALWGKGVIAGQSVLLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ ++ +F+K+ +E+ LV+HDDLDL FG +RLK GGG GH GL SI +
Sbjct: 61 PQTFMNLSGKSVRKLADFFKIV-VEDVLVVHDDLDLPFGVIRLKAGGGQGGHKGLISICD 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
G ++R+R+GIG+P + + R+VL F+ E +LP I ARS
Sbjct: 120 SLGGPEFQRVRLGIGKPAQRSAVERYVLEPFTESELR-ILPRIIVTARS 167
>gi|168038662|ref|XP_001771819.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676950|gb|EDQ63427.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 252
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG ++ RHNIGF ID I P + + + +G + +L KP
Sbjct: 59 WLIVGLGNPGIKFEGTRHNIGFDMIDAIAEAENIPLRMIQHKSLLGKGYIGTTPVLLAKP 118
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S+ + +YK+P E L I DDLDL F TL+L GG GHNG++S+ +
Sbjct: 119 QTYMNLSGESVGPLSAYYKIPR-ERVLAIFDDLDLQFATLKLLPKGGHGGHNGMRSLIDH 177
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +++ RLR GIGRP + +VL FSS E
Sbjct: 178 FGGKQDFPRLRFGIGRPAGSMPPSAYVLQKFSSKE 212
>gi|255994798|ref|ZP_05427933.1| aminoacyl-tRNA hydrolase [Eubacterium saphenum ATCC 49989]
gi|255993511|gb|EEU03600.1| aminoacyl-tRNA hydrolase [Eubacterium saphenum ATCC 49989]
Length = 186
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 101/169 (59%), Gaps = 3/169 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHN+GFM ID I + K+KF + + E + + +L+K
Sbjct: 1 MKVIVGLGNPGKDYEKTRHNVGFMVIDEIANKLGISGGKEKFDSLLLEDFVGREKVVLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P TFMN SG+++ +M+FY L + + +VI+DD+D+D G LR++ G HNG+KS I
Sbjct: 61 PLTFMNDSGRAVRRIMDFYSL-DPGDIIVIYDDVDIDLGKLRIRKNGSAGTHNGMKSIIY 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
E ++ R+R+GI + + R VL NFS E ++ ++ A +
Sbjct: 120 ELKSDDFPRVRLGINKEK-RGDLKRFVLKNFSKDEIPMIIDVVKRAADA 167
>gi|254415168|ref|ZP_05028930.1| peptidyl-tRNA hydrolase [Microcoleus chthonoplastes PCC 7420]
gi|196177974|gb|EDX72976.1| peptidyl-tRNA hydrolase [Microcoleus chthonoplastes PCC 7420]
Length = 201
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 99/163 (60%), Gaps = 4/163 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQ-LDGLRTILIK 60
++ GLGNP +Y + RHNIGF +D + + ++F A ++EG+ L G + ++K
Sbjct: 11 LIVGLGNPEPKYDKTRHNIGFEVVDELARRVQISWSENRRFQALLAEGRGLTGDKLRVLK 70
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ +++YK+P E+ L+++D+LDL G LR++ G GHNG+KS
Sbjct: 71 PLTYMNRSGQAIRAAIDWYKMPP-ESVLIVYDELDLPVGRLRIRLSGSAGGHNGMKSAIA 129
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
G + + RLRIGIG+ + + HVLG FS E + +I
Sbjct: 130 HLGTQGFPRLRIGIGKSDPEKNTVGHVLGKFSPDESKIITEVI 172
>gi|33860808|ref|NP_892369.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|46576734|sp|Q7V342|PTH_PROMP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|33633750|emb|CAE18709.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 203
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 101/182 (55%), Gaps = 9/182 (4%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+ GLGNPG EY +NRHNIGF+ ++ + K K + SE +++ L P
Sbjct: 8 IIGLGNPGKEYIQNRHNIGFLLLENFSEKYDSKFTLKNKLKSWYSEFKINNFTYRLFMPN 67
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMN SG ++ ++++YK+ +L+ +I DD+DL G +R + G GHNG+K I K
Sbjct: 68 TFMNNSGNAVRAIVDWYKI-DLDRLFIIVDDIDLPLGKIRFRKKGSSGGHNGIKDIINKL 126
Query: 123 -GKNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSL-PLLAKR 175
+N+ R++IGIG PP T + I HVLGN SS E L + + SL L K
Sbjct: 127 QTENFNRIKIGIGSPPVNERKKTLNTISHVLGNISSKESLTLDRVYKKLIESLIELNDKN 186
Query: 176 ED 177
ED
Sbjct: 187 ED 188
>gi|261880167|ref|ZP_06006594.1| aminoacyl-tRNA hydrolase [Prevotella bergensis DSM 17361]
gi|270333138|gb|EFA43924.1| aminoacyl-tRNA hydrolase [Prevotella bergensis DSM 17361]
Length = 194
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 88/162 (54%), Gaps = 2/162 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG EY RHN GFM +D ++ K + ++ + G + IL+KP
Sbjct: 4 FLICGLGNPGDEYAGTRHNTGFMILDAFAKASNI-CFEDKRYGFVANTSIKGRKVILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N K+ + LVI DD+ L G RLK GG + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNEEKI-DQSRLLVISDDVALPLGEFRLKAGGSNGGHNGLGHIIQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G NY RLR+G+G + VLG +S E L P D
Sbjct: 122 IGDNYARLRVGVGNDYPRGGQVDWVLGRYSEDEMKVLQPTFD 163
>gi|225869493|ref|YP_002745440.1| peptidyl-tRNA hydrolase [Streptococcus equi subsp. equi 4047]
gi|254783888|sp|C0M9G4|PTH_STRE4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|225698897|emb|CAW91882.1| peptidyl-tRNA hydrolase [Streptococcus equi subsp. equi 4047]
Length = 189
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 98/169 (57%), Gaps = 3/169 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG ++ + +HN+GFM +DR + K F A I ++ + +KP
Sbjct: 4 MIVGLGNPGSKHQQTKHNVGFMAVDRLVKDLDVSFTEDKTFKALIGSTFINQEKIYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + ++ +VI+DDLD+ G +RL+ G GHNG+KSI
Sbjct: 64 TTFMNNSGLAVRALLTYYNIST-KDLMVIYDDLDMAVGKIRLRQKGSAGGHNGIKSIIAH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + R++IGIGRP +I HVLG F + + + +D + +++
Sbjct: 123 IGTQEFDRVKIGIGRPSHGMSVINHVLGKFDTDDMITINIALDKVDKAI 171
>gi|113953631|ref|YP_729546.1| peptidyl-tRNA hydrolase [Synechococcus sp. CC9311]
gi|119391027|sp|Q0IDC6|PTH_SYNS3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|113880982|gb|ABI45940.1| peptidyl-tRNA hydrolase [Synechococcus sp. CC9311]
Length = 207
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 100/180 (55%), Gaps = 20/180 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-----FHFFPAWKKKFHAEISEGQLDGLRTI 57
+V GLGNPG+ Y RHN+GFM ++R+ S F P + + A++ G R
Sbjct: 8 LVVGLGNPGNRYANTRHNVGFMALERLASREGGGFRSMPKLQGQL-ADLGSGD---KRLR 63
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+ PQTFMN SG+S+ ++++ L LV+ DD+DL G LRL+ G GHNGLKS
Sbjct: 64 LLMPQTFMNDSGRSIRAALDWFGF-ELHQLLVLVDDMDLPLGRLRLRARGSAGGHNGLKS 122
Query: 118 ISEKCG-KNYKRLRIGIGRPPDT-----AHIIRHVLGNFSSPER----YFLLPIIDNIAR 167
+ G +++ RLRIGIG P A + HVLG+FS E LL ++D + R
Sbjct: 123 TIQHLGTQDFARLRIGIGAPGQNPSERKARTVSHVLGSFSRDEEPLLDKVLLEVVDGLER 182
>gi|312885933|ref|ZP_07745564.1| peptidyl-tRNA hydrolase [Mucilaginibacter paludis DSM 18603]
gi|311301594|gb|EFQ78632.1| peptidyl-tRNA hydrolase [Mucilaginibacter paludis DSM 18603]
Length = 186
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 93/167 (55%), Gaps = 11/167 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFH----AEISEGQLDGLRTI 57
+++ GLGN G EY + RHNIGFM +D++ +KFH A +E + G
Sbjct: 3 YLIVGLGNIGPEYADTRHNIGFMILDQL-----VKEENEKFHNMRLAYYAEVKYKGRMLH 57
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
LIKP T+MNLSG +L MN K+P LEN LV+ DDL L GTLRLK G AGHNGLK
Sbjct: 58 LIKPTTYMNLSGNALRYWMNELKVP-LENVLVLVDDLALPLGTLRLKPKGSAAGHNGLKH 116
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
I G NY RLR GI I +VL F E+ L +ID
Sbjct: 117 IEATLGHNNYARLRFGISDNFPKGRQIDYVLDAFDKDEQPELPALID 163
>gi|296169882|ref|ZP_06851494.1| aminoacyl-tRNA hydrolase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295895438|gb|EFG75140.1| aminoacyl-tRNA hydrolase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 191
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 107/176 (60%), Gaps = 5/176 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILI 59
+V GLGNPG Y RHN+GFM D + + +K K+ AE+ G+L G ++
Sbjct: 5 LLVVGLGNPGDNYARTRHNLGFMVAD-LLAGRLGSKFKVHKRSGAEVVSGRLAGHPVLVA 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+ +MN SG+ + + FY +P + +V+HDDLDLDFG +RLK GGG+ GHNGL+S++
Sbjct: 64 KPRCYMNESGRQVGPLAKFYSVPP-ADIVVVHDDLDLDFGRIRLKIGGGEGGHNGLRSVA 122
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K ++R+RIGIGRPP VL NFS+ ER + I + A + LL +
Sbjct: 123 SALGTKEFQRVRIGIGRPPGRKDPAAFVLENFSAAERGDVPTICEQAADATELLVE 178
>gi|184154690|ref|YP_001843030.1| peptidyl-tRNA hydrolase [Lactobacillus fermentum IFO 3956]
gi|227514330|ref|ZP_03944379.1| aminoacyl-tRNA hydrolase [Lactobacillus fermentum ATCC 14931]
gi|238692940|sp|B2GA68|PTH_LACF3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|183226034|dbj|BAG26550.1| peptidyl-tRNA hydrolase [Lactobacillus fermentum IFO 3956]
gi|227087302|gb|EEI22614.1| aminoacyl-tRNA hydrolase [Lactobacillus fermentum ATCC 14931]
Length = 186
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 95/157 (60%), Gaps = 4/157 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM ++++ FH +K A G ++G + +L+
Sbjct: 1 MKMIVGLGNIGTRYDETRHNAGFMVVEQLARDFHLGAFTHEKVEAVTVTGLINGQKVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ +M +Y + L++ +V+ DDLD+ G ++LK G GHNGLKS+
Sbjct: 61 KPTTFMNESGRAVKPLMEYYDIA-LDDLIVVSDDLDMPVGKIKLKQRGASGGHNGLKSLI 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ G + + R+++GI P ++ HVLG F + ER
Sbjct: 120 DHLGTREFNRVKLGIDHPK-FGSVVSHVLGRFDTEER 155
>gi|78776667|ref|YP_392982.1| peptidyl-tRNA hydrolase [Sulfurimonas denitrificans DSM 1251]
gi|119391034|sp|Q30TD4|PTH_SULDN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78497207|gb|ABB43747.1| peptidyl-tRNA hydrolase [Sulfurimonas denitrificans DSM 1251]
Length = 184
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 102/184 (55%), Gaps = 19/184 (10%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGL-----RTI 57
++ GLGNPG Y RHNIGFM ID + KK +A+ DG
Sbjct: 2 LIVGLGNPGANYERTRHNIGFMVIDEL---------VKKQNAQKISSSFDGTLFKFSNHF 52
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KP TFMNLSG ++ +V FYK+ + +VIHDDLDL FGTLR K GGG GHNGL+S
Sbjct: 53 LLKPLTFMNLSGSAIRDVKQFYKI---DEVVVIHDDLDLPFGTLRFKKGGGHGGHNGLRS 109
Query: 118 ISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-- 175
E K Y R+R+GIG+P + +VL NF+ E+ L I +++ L
Sbjct: 110 TDEHISKEYIRVRMGIGKPEHKGEVASYVLSNFTKDEQAHLDEFITFTCKAIEALLTNTL 169
Query: 176 EDVS 179
EDVS
Sbjct: 170 EDVS 173
>gi|88607642|ref|YP_505815.1| peptidyl-tRNA hydrolase [Anaplasma phagocytophilum HZ]
gi|119390910|sp|Q2GII6|PTH_ANAPZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|88598705|gb|ABD44175.1| peptidyl-tRNA hydrolase [Anaplasma phagocytophilum HZ]
Length = 183
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 112/187 (59%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y E RHN+GFM ID + FFP + K A +S G + R +L+K
Sbjct: 1 MLLLVGLGNPGKRYAETRHNVGFMIIDAVARGFFFPEFCSKHDALVSIGNIGTHRVMLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +MN SG S+L + +K+ E+ V HDD++L GT+R+K GGG GHNGL+SI
Sbjct: 61 PLLYMNRSGTSVLSCTSMHKIAP-EHITVFHDDVELQPGTIRVKLGGGSGGHNGLRSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
GK Y R+R G+GR + ++ +VL +F + + + +++++A +L +L F
Sbjct: 120 AIGKAYWRVRFGVGR-AELCNLSDYVLSDFENIAQ--VTDLVNSVAANLQMLLDGNAAGF 176
Query: 181 LNHIVSV 187
++ + SV
Sbjct: 177 VSKVTSV 183
>gi|224538933|ref|ZP_03679472.1| hypothetical protein BACCELL_03830 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519451|gb|EEF88556.1| hypothetical protein BACCELL_03830 [Bacteroides cellulosilyticus
DSM 14838]
Length = 187
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 93/156 (59%), Gaps = 7/156 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH--FFPAWKKKFHAEISEGQLDGLRTILI 59
+++ GLGN G +Y E RHNIGFM +D + F + F +S + G + +L+
Sbjct: 3 YLIVGLGNIGPDYHETRHNIGFMVVDALAKAAGVTFNDGRYGFTTTLS---VKGRQLLLL 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG ++ M +P LEN LVI DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 60 KPSTFMNLSGNAVRYWMQKENIP-LENVLVIVDDLALPFGTLRLKGKGSDAGHNGLKHIA 118
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +NY RLR GIG I +VLG+F+ +
Sbjct: 119 AILGTQNYARLRFGIGNEFPRGGQIDYVLGHFTDED 154
>gi|212703169|ref|ZP_03311297.1| hypothetical protein DESPIG_01210 [Desulfovibrio piger ATCC 29098]
gi|212673435|gb|EEB33918.1| hypothetical protein DESPIG_01210 [Desulfovibrio piger ATCC 29098]
Length = 197
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 99/182 (54%), Gaps = 10/182 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID------RIHSFHFFPAWKKKFHAEISEGQLDGL-- 54
+V GLGNPG++Y RHN GF ++ R KF E+ + GL
Sbjct: 6 VVVGLGNPGNQYAGTRHNCGFAFVESLLDHARREGGQVQSQNGGKFSCELWRLRYGGLPG 65
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
+ PQTFMNLSGQ + ++ ++K+ + +V+HD+LD+ G LR K GGG+AGHNG
Sbjct: 66 DWLAAMPQTFMNLSGQCVQPLLAWHKI-RPDQLVVVHDELDIPAGELRFKKGGGNAGHNG 124
Query: 115 LKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
LKSI++ ++ RLRIGIGRPP +I VLG S + + D L + A
Sbjct: 125 LKSITQMLATPDFYRLRIGIGRPPQKGDVINWVLGRPCSEDADKIRTATDKALEVLEIFA 184
Query: 174 KR 175
K+
Sbjct: 185 KK 186
>gi|297808049|ref|XP_002871908.1| aminoacyl-tRNA hydrolase [Arabidopsis lyrata subsp. lyrata]
gi|297317745|gb|EFH48167.1| aminoacyl-tRNA hydrolase [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 87/156 (55%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHNIGF ID F A + +G +D L IL KP
Sbjct: 18 WLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVDDLPVILAKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QT+MNLSG+S + +YKLP L LV+HDD+ L G LRL+ GG HNGLKS+
Sbjct: 78 QTYMNLSGESSGPLAAYYKLP-LNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNH 136
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + + RLRIGIG PP +L FS P R
Sbjct: 137 FRGNREFARLRIGIGNPPGQMDPKAFLLQKFSVPAR 172
>gi|229495524|ref|ZP_04389257.1| peptidyl-tRNA hydrolase [Porphyromonas endodontalis ATCC 35406]
gi|229317507|gb|EEN83407.1| peptidyl-tRNA hydrolase [Porphyromonas endodontalis ATCC 35406]
Length = 252
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 99/169 (58%), Gaps = 4/169 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHN+GF + I + ++ + ++ G++ +L+KP
Sbjct: 48 YLIVGLGNIGEEYWGTRHNVGFRMANAIAE-EIGATFTEQRYGAVARGRIKNAELVLLKP 106
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + LP E L++ DDL LDFGTLRLK+ G DAGHNGLK+I++
Sbjct: 107 STYMNLSGEAVRYWLQKENLPT-EQLLILVDDLALDFGTLRLKSKGSDAGHNGLKNIAQL 165
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G Y RLR G+G I VLG+F +PE +P++ A ++
Sbjct: 166 LGTAEYARLRFGLGSRFSKGRQIEFVLGHF-TPEEEQYMPLLTKEAVAI 213
>gi|305665463|ref|YP_003861750.1| peptidyl-tRNA hydrolase [Maribacter sp. HTCC2170]
gi|88710219|gb|EAR02451.1| peptidyl-tRNA hydrolase [Maribacter sp. HTCC2170]
Length = 209
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 99/173 (57%), Gaps = 6/173 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G EY E RHNIGF +D++ F K A I ++ G + +KP
Sbjct: 25 FLIVGLGNIGSEYAETRHNIGFKILDQLAKEKDFVFETAKLGA-IGSFKIKGRTVLCLKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG++L M K+P +EN LV+ DD++L+FGT+RLKT G D GHNGLK I
Sbjct: 84 STYMNRSGKALKYWMEKEKIP-IENLLVVTDDINLEFGTIRLKTKGSDGGHNGLKDIQLF 142
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
+Y R R G+G + +VLG ++ E+ + + + +S+ L++
Sbjct: 143 LNSTSYNRFRFGVGADFGKGRQVDYVLGEWNEKEKD---SMTERLEKSIQLIS 192
>gi|319953433|ref|YP_004164700.1| peptidyl-tRNA hydrolase [Cellulophaga algicola DSM 14237]
gi|319422093|gb|ADV49202.1| peptidyl-tRNA hydrolase [Cellulophaga algicola DSM 14237]
Length = 209
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 90/155 (58%), Gaps = 3/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY + RHNIGF +D++ K A ++ +L G +L+KP
Sbjct: 25 YLIIGLGNIGPEYAQTRHNIGFKVLDKLAELEDLNFETAKLGA-VTTLKLKGRSVLLLKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG++L M +P LEN LVI DD++LD+G +R+KT G + GHNGLK I
Sbjct: 84 STYMNLSGKALQYWMEKENIP-LENVLVITDDINLDYGVIRVKTKGSNGGHNGLKDIQNV 142
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
NY R R G+G + +VLG ++ E+
Sbjct: 143 LNSANYNRFRFGVGADFGKGKQVDYVLGKWNDDEK 177
>gi|313889528|ref|ZP_07823174.1| aminoacyl-tRNA hydrolase [Streptococcus pseudoporcinus SPIN 20026]
gi|313122140|gb|EFR45233.1| aminoacyl-tRNA hydrolase [Streptococcus pseudoporcinus SPIN 20026]
Length = 189
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 91/154 (59%), Gaps = 3/154 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y +HN+GFM +D++ +F K F A I ++ + +KP
Sbjct: 4 MIVGLGNPGSKYDNTKHNVGFMAVDQLAKNFDVSFTEDKNFKALIGWAFINQEKVYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + + + +VI+DDLD++ G LR + G GHNG+KSI
Sbjct: 64 TTFMNNSGIAVRALLTYYNIA-ISDLIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIAN 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + + R++IGIGRP +I HVLG F +
Sbjct: 123 IGSQEFDRVKIGIGRPHSGMTVINHVLGKFEKED 156
>gi|296111606|ref|YP_003621988.1| peptidyl-tRNA hydrolase [Leuconostoc kimchii IMSNU 11154]
gi|295833138|gb|ADG41019.1| peptidyl-tRNA hydrolase [Leuconostoc kimchii IMSNU 11154]
Length = 189
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 101/171 (59%), Gaps = 2/171 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G +Y + RHNIGFM +D + + K A ++ +DG + +L+K
Sbjct: 1 MKYIIGLGNIGKQYDKTRHNIGFMALDAFAAAYQASFTPSKQFATTAKITVDGEQVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MN SG+++ ++++Y ++ LV+ DD+DL FG LR + G GHNGLKS I+
Sbjct: 61 PTTYMNDSGKAVRAILDYYGGDINQDVLVLVDDMDLPFGKLRFRAKGSAGGHNGLKSIIA 120
Query: 120 EKCGKNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ + RL+ G+G P D +I +VLG F++ E + ++DN ++L
Sbjct: 121 HTNSQTFLRLKFGLGHPDHDKQVVINYVLGQFTATESQDVEHMLDNSTKAL 171
>gi|302865258|ref|YP_003833895.1| peptidyl-tRNA hydrolase [Micromonospora aurantiaca ATCC 27029]
gi|302568117|gb|ADL44319.1| peptidyl-tRNA hydrolase [Micromonospora aurantiaca ATCC 27029]
Length = 195
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQL--DGLRTIL 58
++V GLGNPG EY NRHN+GFM D + + + K+ AE +EG+L G + +L
Sbjct: 7 WLVVGLGNPGREYAGNRHNVGFMVADLLAARVGAKFGRHKRAMAEAAEGRLGFGGPKLVL 66
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG + + F+K+P + + +HD+LD+ +G +R+K GGG+ GHNGL+S+
Sbjct: 67 LKPLTYMNLSGGPVAGLAQFHKIPP-AHVIAVHDELDIPYGQVRVKCGGGEGGHNGLRSM 125
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
S+ G K+Y R+R GIGRPP +VL +FSS ER L ++D A
Sbjct: 126 SKSLGTKDYVRVRFGIGRPPGRQDPADYVLSDFSSSERKELEFLVDRAA 174
>gi|33864807|ref|NP_896366.1| peptidyl-tRNA hydrolase [Synechococcus sp. WH 8102]
gi|46576729|sp|Q7U9I5|PTH_SYNPX RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|33632330|emb|CAE06786.1| putative peptidyl-tRNA hydrolase (PTH) [Synechococcus sp. WH 8102]
Length = 203
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 104/180 (57%), Gaps = 8/180 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHNIGFM ++++ S F + K H ++E + R L+ P
Sbjct: 7 LVVGLGNPGTKYEGTRHNIGFMALEQMASREGFSFRQQSKLHGLVAEHGIGESRLRLLMP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+S+ ++++ E LV+ DD+D+ G LRL+ G GHNGL+S +
Sbjct: 67 QTYMNDSGRSIRAALDWFGF-TPEQLLVLVDDMDIPLGRLRLRGQGSAGGHNGLRSTIQH 125
Query: 122 CG-KNYKRLRIGIGRPPDT-----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G + + RLRIGIG P D A + HVLG+FS E+ + ++D + ++ + ++
Sbjct: 126 LGTQAFPRLRIGIGAPADNPAERRARTVSHVLGSFSRAEQPEVDVVLDGVLEAIQRIQRQ 185
>gi|303246472|ref|ZP_07332751.1| peptidyl-tRNA hydrolase [Desulfovibrio fructosovorans JJ]
gi|302492182|gb|EFL52057.1| peptidyl-tRNA hydrolase [Desulfovibrio fructosovorans JJ]
Length = 207
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 98/181 (54%), Gaps = 20/181 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTIL---- 58
++ GLGNPG Y RHN GF+ +D + + K A S +D + L
Sbjct: 6 LIVGLGNPGPRYAATRHNFGFLAVDALIARARELGGAPK-SAMTSRKDMDAVAIALPVLP 64
Query: 59 ---------IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGD 109
+KP T+MNLSG+++ M+FYKL + LVIHD+LDL G +R K GGG+
Sbjct: 65 GGAFAQFVCVKPLTYMNLSGRAVRAAMDFYKLAP-TDVLVIHDELDLPLGRMRAKRGGGN 123
Query: 110 AGHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPE----RYFLLPIIDN 164
AGHNGLKS++++ G ++ RLR+GIGRP + +VL F E R L +D
Sbjct: 124 AGHNGLKSLTQELGSPDFVRLRLGIGRPEPGRDVAGYVLEPFRGEEMAVVRQVLPAAVDA 183
Query: 165 I 165
+
Sbjct: 184 V 184
>gi|297624375|ref|YP_003705809.1| peptidyl-tRNA hydrolase [Truepera radiovictrix DSM 17093]
gi|297165555|gb|ADI15266.1| peptidyl-tRNA hydrolase [Truepera radiovictrix DSM 17093]
Length = 200
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y RHN GF+ +D + + H AW+K+ AE+ L+KP
Sbjct: 11 LIVGLGNPGPQYENTRHNAGFLVVDLLAARHGV-AWRKERQAEVGRWG----DVTLLKPL 65
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG ++ M +L E LV+HDDLDL G LRL+ GG G G++ +
Sbjct: 66 TFMNLSGAAVQAQMTKLRLSPAE-LLVVHDDLDLPLGRLRLRAGGSAGGQRGVQDTIYRL 124
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYF 157
G ++ RL++GI RPP + VL F ER
Sbjct: 125 GPDFTRLKVGISRPPAGWKVENWVLSRFREEERAL 159
>gi|268317961|ref|YP_003291680.1| peptidyl-tRNA hydrolase [Rhodothermus marinus DSM 4252]
gi|262335495|gb|ACY49292.1| peptidyl-tRNA hydrolase [Rhodothermus marinus DSM 4252]
Length = 194
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 96/164 (58%), Gaps = 8/164 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN GFM +DR+ + AW+ +K + + GQL+G L+KP
Sbjct: 6 LIVGLGNPGPRYANTRHNAGFMVVDRLAERYGI-AWRSEKGPSLLGWGQLEGCPAGLMKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG ++ EV+ +Y++P LE LV++DD+ L G +RL+ GG GHNG++ I
Sbjct: 65 LTYMNRSGAAVAEVVRYYRIP-LERLLVVYDDIHLPPGRIRLRPGGSAGGHNGVEDIIRA 123
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G + RLRIGIG + +VL F+ E P+ID
Sbjct: 124 LGTTAFPRLRIGIGSNFERGRQADYVLSPFTREE----WPLIDE 163
>gi|261343915|ref|ZP_05971560.1| aminoacyl-tRNA hydrolase [Providencia rustigianii DSM 4541]
gi|282568301|gb|EFB73836.1| aminoacyl-tRNA hydrolase [Providencia rustigianii DSM 4541]
Length = 196
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 93/173 (53%), Gaps = 4/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + + G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLARRHNQSLKEESKFFGYTARINIGGDDIRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ V NFY++ NL+ LV HD+LDL G ++K GG + GHNGLK I K
Sbjct: 66 TTFMNLSGKSVAAVANFYRI-NLDEILVAHDELDLPPGVAKMKLGGSNGGHNGLKDIQSK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
N+ RLRIGIG P D ++ VLG E+ + ID R +L
Sbjct: 125 FANNPNFYRLRIGIGHPGDKNKVVGFVLGKPPMSEQKLIDDAIDEALRCTEIL 177
>gi|22298927|ref|NP_682174.1| peptidyl-tRNA hydrolase [Thermosynechococcus elongatus BP-1]
gi|34222743|sp|Q8DJ45|PTH_THEEB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|22295108|dbj|BAC08936.1| peptidyl-tRNA hydrolase [Thermosynechococcus elongatus BP-1]
Length = 205
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 101/169 (59%), Gaps = 9/169 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN+GF +D + + +++F E++E + G + L+KP
Sbjct: 7 VIVGLGNPGIEYATTRHNVGFRVLDTLAQRYRVQLTQQRRFLGEVAEVLIQGQKVRLLKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQSL ++NFYKLP LE LV+HDD DL G LRL+ G GHNG+KSI +
Sbjct: 67 TTYMNSSGQSLHALLNFYKLP-LERTLVVHDDADLPLGRLRLRLSGSTGGHNGIKSIIQH 125
Query: 122 C-GKNYKRLRIGIG------RPPDTAHIIRHVLGNFSSPERYFLLPIID 163
C + + RL++GI + + + VLG+FS+ E L ++D
Sbjct: 126 CHSQQFPRLKVGIAFGDRLQQQTGPRNAVPFVLGHFSATELAILPAVLD 174
>gi|329961418|ref|ZP_08299541.1| aminoacyl-tRNA hydrolase [Bacteroides fluxus YIT 12057]
gi|328531895|gb|EGF58718.1| aminoacyl-tRNA hydrolase [Bacteroides fluxus YIT 12057]
Length = 187
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 93/156 (59%), Gaps = 7/156 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH--SFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+++ GLGN G EY E RHNIGFM +D + + F + F +S + G + +L+
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMVVDALAKAAGATFTDRRYGFTTTLS---VKGRQLLLL 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 60 KPSTYMNLSGNAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIA 118
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +NY RLR GIG I VLG+F+ +
Sbjct: 119 ATLGTQNYARLRFGIGNEFPRGGQIDFVLGHFTDED 154
>gi|315501802|ref|YP_004080689.1| peptidyl-tRNA hydrolase [Micromonospora sp. L5]
gi|315408421|gb|ADU06538.1| peptidyl-tRNA hydrolase [Micromonospora sp. L5]
Length = 196
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQL--DGLRTIL 58
++V GLGNPG EY NRHN+GFM D + + + K+ AE +EG+L G + +L
Sbjct: 8 WLVVGLGNPGREYAGNRHNVGFMVADLLAARVGAKFGRHKRAMAEAAEGRLGFGGPKLVL 67
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG + + F+K+P + + +HD+LD+ +G +R+K GGG+ GHNGL+S+
Sbjct: 68 LKPLTYMNLSGGPVAGLAQFHKIPP-AHVIAVHDELDIPYGQVRVKCGGGEGGHNGLRSM 126
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
S+ G K+Y R+R GIGRPP +VL +FSS ER L ++D A
Sbjct: 127 SKSLGTKDYVRVRFGIGRPPGRQDPADYVLSDFSSSERKELEFLVDRAA 175
>gi|290475208|ref|YP_003468094.1| peptidyl-tRNA hydrolase [Xenorhabdus bovienii SS-2004]
gi|289174527|emb|CBJ81321.1| peptidyl-tRNA hydrolase [Xenorhabdus bovienii SS-2004]
Length = 196
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H P + KF + L+G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWFVDLLAQRHRQPLKEESKFFGYTARINLNGQDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+L + FY++ + LV HD+LDL G ++K GG + GHNGLK I K
Sbjct: 66 TTFMNLSGKSVLALAGFYRI-QPDEILVAHDELDLPPGVAKMKLGGSNGGHNGLKDIQNK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
N+ RLRIGIG P D ++ VLG + E+ + ID +L K
Sbjct: 125 FSNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPASEQKLIDEAIDEALSCTDILMKEGMNK 184
Query: 180 FLNHIVSVR 188
+N + + R
Sbjct: 185 AINRLHAFR 193
>gi|293400064|ref|ZP_06644210.1| aminoacyl-tRNA hydrolase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306464|gb|EFE47707.1| aminoacyl-tRNA hydrolase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 186
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 96/156 (61%), Gaps = 3/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG EY RHN GF +D I +KKF + I ++ G + IL+K
Sbjct: 1 MKLIAGLGNPGKEYENTRHNSGFCVMDAIAKELHVDITQKKFKSLICMTRIQGEQVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
PQT+MN SG++++E + FY + ++++ L+I+DDLDL G +RL+ G G NG+K+ I+
Sbjct: 61 PQTYMNNSGEAIIEAVKFYHI-DVKDILIIYDDLDLPVGKIRLREKGSAGGQNGMKNIIA 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ +KR+R+GIG+ +I VLG +R
Sbjct: 120 HLHTQEFKRIRVGIGKDSRVP-VIDWVLGKIRKEDR 154
>gi|315225261|ref|ZP_07867078.1| aminoacyl-tRNA hydrolase [Capnocytophaga ochracea F0287]
gi|314944944|gb|EFS96976.1| aminoacyl-tRNA hydrolase [Capnocytophaga ochracea F0287]
Length = 188
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 96/160 (60%), Gaps = 4/160 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++A LGN G EY RHNIGF+ D + H +K +++E ++ G IL+KP
Sbjct: 4 YLIACLGNIGVEYTNTRHNIGFLVADTLVKDHNASFTTQKL-GDLAEIKVKGRTFILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M +P LEN LVI DDL++ FGT+R+K G D GHNGLK I +
Sbjct: 63 STYMNLSGKAVRYWMEKENIP-LENLLVICDDLNIPFGTIRIKGKGSDGGHNGLKDIQAQ 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLP 160
+ Y RLR GI ++ I +VLG + +PE LLP
Sbjct: 122 LNTQQYTRLRFGISSNFESGKQIDYVLGEW-TPEEQTLLP 160
>gi|7388025|sp|O85235|PTH_LACSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|3511016|gb|AAD03811.1| unknown [Lactobacillus sakei]
Length = 177
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 94/151 (62%), Gaps = 3/151 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HNIGFM ID++ + K F AE + +G +L+K
Sbjct: 1 MKMIVGLGNPGSKYAKTKHNIGFMVIDQLCEKYNVTLNKHDFEAEYGSFKYEGETVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P TFMN SG+S+ +M++Y++ ++ LVI DD+DL G LRL+ G GHNG+KS I+
Sbjct: 61 PLTFMNDSGRSVGPLMSYYQV-GIDELLVIQDDMDLTMGKLRLRQKGSAGGHNGIKSIIA 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNF 150
+ +KRL+IGI + P + ++ VL F
Sbjct: 120 HTKSQTFKRLKIGI-QHPQKSTVVNWVLTPF 149
>gi|154496045|ref|ZP_02034741.1| hypothetical protein BACCAP_00329 [Bacteroides capillosus ATCC
29799]
gi|150274600|gb|EDN01664.1| hypothetical protein BACCAP_00329 [Bacteroides capillosus ATCC
29799]
Length = 196
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 3/170 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V LGNPG +Y RHN+GFM D + P + KF A + QL G + +L+KP
Sbjct: 12 WLVVCLGNPGDKYENTRHNVGFMVADELAERKNIPVQRLKFKALTNTTQLGGAQVLLMKP 71
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + +FYK+ + ++ LV+ DD+ L G LR++ G GHNGLK+I ++
Sbjct: 72 VTYMNLSGEAVRQAADFYKV-SPDHVLVVSDDVSLPVGRLRIRKSGSAGGHNGLKNIIQQ 130
Query: 122 CGKN-YKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + RL++G+G P + + VLG F ++ + I A ++
Sbjct: 131 LGTDQFPRLKVGVGEKPHPDYDLADWVLGKFVGEDKKTIDAAIKRAADAV 180
>gi|160900867|ref|YP_001566449.1| peptidyl-tRNA hydrolase [Delftia acidovorans SPH-1]
gi|238687171|sp|A9BP19|PTH_DELAS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|160366451|gb|ABX38064.1| Aminoacyl-tRNA hydrolase [Delftia acidovorans SPH-1]
Length = 207
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 96/171 (56%), Gaps = 10/171 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+ GLGNPG EY + RHN GF ID R P ++ + ++ + G L+
Sbjct: 4 LFVGLGNPGPEYEDTRHNAGFWWIDALARELKVQLVP--ERSYFGLMARASVRGENVWLL 61
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+PQTFMNLSG+S+ + F+K+ E LV+HD+LD + G ++LK GG GHNGL+ I
Sbjct: 62 QPQTFMNLSGKSVGALARFFKI-QPEEVLVVHDELDFEPGQVKLKRGGSHGGHNGLRDIH 120
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ G +Y RLRIGIG P A + VL + +R I D+IA SL
Sbjct: 121 AQLGSADYWRLRIGIGHPGHKAEVANWVLKKPAPDQRQL---IEDSIAHSL 168
>gi|255582564|ref|XP_002532065.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
gi|223528269|gb|EEF30320.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
Length = 217
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 82/138 (59%), Gaps = 3/138 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF ID P K A EG + +L KP
Sbjct: 18 WLIVGLGNPGDKYKGTRHNVGFEMIDAFAQLLQIPMDKLHSKAIFGEGFVGEASVLLAKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QT+MNLSG+S + +YKLP L +V+HDD+DL G LRL+ GG HNGLKS+
Sbjct: 78 QTYMNLSGESAGPLAAYYKLP-LNRVIVLHDDMDLPCGVLRLQPKGGHGSHNGLKSVIHH 136
Query: 121 -KCGKNYKRLRIGIGRPP 137
+ + + RLRIGIGRPP
Sbjct: 137 FRGNREFARLRIGIGRPP 154
>gi|227891597|ref|ZP_04009402.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius ATCC 11741]
gi|227866744|gb|EEJ74165.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius ATCC 11741]
Length = 200
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 109/184 (59%), Gaps = 7/184 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN+GFM ++R H K+KF + ISE ++G + I+IK
Sbjct: 16 MKMIVGLGNIGKKYEGTRHNVGFMVVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIK 75
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M+++ L E+ ++ HDD+DL+ G LRL+ G GHNG+KSI
Sbjct: 76 PTTYMNESGRAVRPLMDYFNLTT-EDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIIS 134
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + +KR+R+GI P + ++ VL F+ + + D + R++ L E+
Sbjct: 135 HVGTEKFKRVRVGIDHPQKMS-VVDWVLSRFTKEQE---AKLDDGLTRAVAALDDWIEND 190
Query: 179 SFLN 182
F+N
Sbjct: 191 DFMN 194
>gi|160914797|ref|ZP_02077011.1| hypothetical protein EUBDOL_00804 [Eubacterium dolichum DSM 3991]
gi|158433337|gb|EDP11626.1| hypothetical protein EUBDOL_00804 [Eubacterium dolichum DSM 3991]
Length = 186
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 96/156 (61%), Gaps = 3/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF +D I +KKF A +++ ++ +L+K
Sbjct: 1 MKLIVGLGNPGKEYENTRHNSGFCVMDAIAKECNVEINQKKFKALVAQTRIGKESVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG++L++ +NFY + ++++ LVI+DDLDL G +RL+ G G NG+K+I +
Sbjct: 61 PQTYMNLSGEALIQAVNFYHI-DIKDILVIYDDLDLPVGKIRLREKGSAGGQNGMKNIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + R+R+GIG+ +I VLG E+
Sbjct: 120 HLHTQEFNRIRVGIGKDARVP-VIDWVLGKIRKEEQ 154
>gi|283768628|ref|ZP_06341540.1| aminoacyl-tRNA hydrolase [Bulleidia extructa W1219]
gi|283105020|gb|EFC06392.1| aminoacyl-tRNA hydrolase [Bulleidia extructa W1219]
Length = 190
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 98/171 (57%), Gaps = 4/171 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHN GF+ +D + + K++A IS+ ++ + IL+K
Sbjct: 1 MKLIVGLGNPGKKYEQTRHNSGFLVMDALAHLCHTNISQNKWNALISQVRIGAEQVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG ++ +V +FYK+ LE+ LVIHDD+DL G+LR++ G G G+KSI +
Sbjct: 61 PQTFMNESGIAVRQVFDFYKMA-LEDILVIHDDMDLKVGSLRIRQKGSSGGQKGMKSIQQ 119
Query: 121 KCGKNY-KRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARS 168
R+R+G+G H + VL + E+ I+ A++
Sbjct: 120 HLNSQMIARIRVGVGHSEKGVHEKVPDWVLSSVFPEEKAIFQQTIEQAAKA 170
>gi|326507536|dbj|BAK03161.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 237
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GF ID F A EG +DG+ +L KP
Sbjct: 38 WLFIGLGNPGEKYQSTRHNVGFDMIDAFAESQGISLTTHHFKALFGEGVVDGVPVLLAKP 97
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT++NLSG+S + +YKLP L +V +DD DL G LRL+ GG HNGLKS+
Sbjct: 98 QTYINLSGESAGALAAYYKLP-LHRVIVAYDDTDLPCGVLRLQPKGGYGRHNGLKSVIYH 156
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
KN + RLRIGIGRPP VL F+ R
Sbjct: 157 FRKNREFGRLRIGIGRPPGQMDPKAFVLQKFNKTGR 192
>gi|298530962|ref|ZP_07018363.1| peptidyl-tRNA hydrolase [Desulfonatronospira thiodismutans ASO3-1]
gi|298508985|gb|EFI32890.1| peptidyl-tRNA hydrolase [Desulfonatronospira thiodismutans ASO3-1]
Length = 216
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 109/193 (56%), Gaps = 10/193 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQL-------DGL 54
++AGLGNPG+ Y RHN+GF+ +D + S + P + E +E L D
Sbjct: 16 LIAGLGNPGNRYRNTRHNMGFLVLDHAMDSARWEPGEHVRCLDEKNEFTLWEWTMPEDPA 75
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP T+MN SG+++ V + + E+ LV+HD++DL G ++LK GGG AGHNG
Sbjct: 76 ARYLLKPMTYMNRSGKAVARVADRLNIL-AESILVVHDEVDLPLGRVKLKFGGGLAGHNG 134
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
L+SI++ G +++ RLRIG+GRP D + +VL F+ E+ L +D +L LL
Sbjct: 135 LRSIADHLGSRDFARLRIGVGRPEDQISLSEYVLQKFTPEEQNDLKDSLDRSVAALRLLF 194
Query: 174 KREDVSFLNHIVS 186
L HI S
Sbjct: 195 THGKQPALQHINS 207
>gi|295425672|ref|ZP_06818359.1| aminoacyl-tRNA hydrolase [Lactobacillus amylolyticus DSM 11664]
gi|295064688|gb|EFG55609.1| aminoacyl-tRNA hydrolase [Lactobacillus amylolyticus DSM 11664]
Length = 185
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 3/159 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y +HN GFM +D + F K KF ++ +++G IL++
Sbjct: 1 MKLIAGLGNPGKKYDRTKHNTGFMALDHYLEENNFSLDKDKFEGLWTKQKINGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ +V+NF+K+ + + LVI DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNDSGRSIAQVVNFFKI-DPADILVIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G + + RL+IGI P ++ VL F+ ++ +
Sbjct: 120 DLGTEKFNRLKIGISHPQKMT-VVSWVLTPFNEEQQKLM 157
>gi|300726452|ref|ZP_07059898.1| aminoacyl-tRNA hydrolase [Prevotella bryantii B14]
gi|299776180|gb|EFI72744.1| aminoacyl-tRNA hydrolase [Prevotella bryantii B14]
Length = 190
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 91/162 (56%), Gaps = 2/162 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY + RHN GFM +D ++ K + ++E + G + L+KP
Sbjct: 4 YLICGLGNPGSEYEDTRHNTGFMVLDAFAKASNI-VFEDKRYGFVAETSIKGRKVFLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + + + LVI DD+ L G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENI-DQSHLLVISDDVALPLGAFRLKASGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G+NY RLR+GIG + VLG++S + L P ID
Sbjct: 122 IGQNYARLRMGIGNDYPRGRQVDWVLGHYSEDDMKLLQPAID 163
>gi|222871034|gb|EEF08165.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 96/171 (56%), Gaps = 10/171 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+ GLGNPG EY + RHN GF ID R P ++ + ++ + G L+
Sbjct: 4 LFVGLGNPGPEYEDTRHNAGFWWIDALARELKVQLVP--ERSYFGLMARANVRGENVWLL 61
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+PQTFMNLSG+S+ + F+K+ E LV+HD+LD + G ++LK GG GHNGL+ I
Sbjct: 62 QPQTFMNLSGKSVGALARFFKI-QPEEVLVVHDELDFEPGQVKLKRGGSHGGHNGLRDIH 120
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ G +Y RLRIGIG P A + VL + +R I D+IA SL
Sbjct: 121 AQLGSADYWRLRIGIGHPGHKAEVANWVLKKPAPDQRQL---IEDSIAHSL 168
>gi|169628235|ref|YP_001701884.1| peptidyl-tRNA hydrolase (PTH) [Mycobacterium abscessus ATCC 19977]
gi|254783879|sp|B1MKD8|PTH_MYCA9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169240202|emb|CAM61230.1| Probable peptidyl-tRNA hydrolase (PTH) [Mycobacterium abscessus]
Length = 196
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 98/156 (62%), Gaps = 7/156 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILI 59
+V GLGNPG Y + RHN+GFM D + + F P KK AE + +L G L
Sbjct: 10 LVVGLGNPGPNYAKTRHNLGFMVADLLAAKDGATFKP--HKKSGAEATTIRLGGRAVNLA 67
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+TFMN SG + + F+ +P N +V+HD+LDLDFGT+RLK GGG+ GHNGL+S+S
Sbjct: 68 KPRTFMNTSGPQVAALAKFFSVPP-ANVIVMHDELDLDFGTVRLKLGGGEGGHNGLRSVS 126
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ G K+Y R+R+G+GRPP VL NF+ E
Sbjct: 127 QSLGTKDYLRVRLGVGRPPGRKDPAAFVLENFAKAE 162
>gi|110597362|ref|ZP_01385649.1| peptidyl-tRNA hydrolase [Chlorobium ferrooxidans DSM 13031]
gi|110340906|gb|EAT59377.1| peptidyl-tRNA hydrolase [Chlorobium ferrooxidans DSM 13031]
Length = 227
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 102/174 (58%), Gaps = 12/174 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSF--HFFPAWKKKFHAEISEGQLDGLRTIL 58
M +VAGLGNP Y RHNIGF +++I F F A K K+ A ++ + + + IL
Sbjct: 38 MKLVAGLGNPESRYTGTRHNIGFEAVEKIADFFQEGFSAGKGKYLA--AKIRHEKEQVIL 95
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
IKP T+MNLSG +++ MNFYK+ + LVI DDL+L G++RL++ G G NGLK I
Sbjct: 96 IKPMTYMNLSGHAVVAAMNFYKIA-ASDILVICDDLNLPAGSIRLRSKGSAGGQNGLKHI 154
Query: 119 SEKCGKN-YKRLRIGIGRPPDT--AHIIRHVLGNFSSPERYFL---LPIIDNIA 166
E G + + RLRIGI +P D VLG FS ER + LP+ + A
Sbjct: 155 IESLGSDEFARLRIGI-KPQDQPLGSFSSFVLGKFSEEERSVMAGVLPVCRDAA 207
>gi|301300312|ref|ZP_07206519.1| aminoacyl-tRNA hydrolase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300852085|gb|EFK79762.1| aminoacyl-tRNA hydrolase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 185
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 109/184 (59%), Gaps = 7/184 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN+GFM ++R H K+KF + ISE ++G + I+IK
Sbjct: 1 MKMIVGLGNIGKKYEGTRHNVGFMVVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M+++ L E+ ++ HDD+DL+ G LRL+ G GHNG+KSI
Sbjct: 61 PTTYMNESGRAVRPLMDYFNLTT-EDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + +KR+R+GI P + ++ VL F+ + + D + R++ L E+
Sbjct: 120 HVGTEKFKRVRVGIDHPQKMS-VVDWVLSRFTKEQE---AKLDDGLTRAVAALDDWIEND 175
Query: 179 SFLN 182
F+N
Sbjct: 176 DFMN 179
>gi|218262819|ref|ZP_03477177.1| hypothetical protein PRABACTJOHN_02857 [Parabacteroides johnsonii
DSM 18315]
gi|218223114|gb|EEC95764.1| hypothetical protein PRABACTJOHN_02857 [Parabacteroides johnsonii
DSM 18315]
Length = 189
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 101/172 (58%), Gaps = 6/172 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF ++ + P ++++ A I+ ++ I++KP
Sbjct: 5 YLITGLGNIGSEYLGTRHNIGFRVVNALAEDAGIPFTEERYGA-IARMRVKNCELIVLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ + +P +EN LV+ DDL L FGTLRLK G DAGHNGLK+I +
Sbjct: 64 NTFMNLSGNAVRYWLQKENIP-VENLLVVVDDLALPFGTLRLKPKGSDAGHNGLKNIQQL 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + Y RLR GIG I +VLG F PE +P D + R++ ++
Sbjct: 123 LGTQEYSRLRFGIGSDFPRGGQINYVLGKF-PPEELQEMP--DKMKRAVEII 171
>gi|238062584|ref|ZP_04607293.1| aminoacyl-tRNA hydrolase [Micromonospora sp. ATCC 39149]
gi|237884395|gb|EEP73223.1| aminoacyl-tRNA hydrolase [Micromonospora sp. ATCC 39149]
Length = 196
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 108/169 (63%), Gaps = 5/169 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQL--DGLRTIL 58
++V GLGNPG EY NRHN+GFM D + + + ++ AE++EG+L G + +L
Sbjct: 8 WLVVGLGNPGREYAGNRHNVGFMVADLLAARVGGKFGRHRRAVAEVAEGRLGFGGPKLVL 67
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG + + F+K+P + IHD+LD+ +G LR+K GGG+ GHNGL+S+
Sbjct: 68 MKPLTYMNLSGGPVAGLAQFHKVPP-GRVIAIHDELDIGYGQLRVKCGGGEGGHNGLRSM 126
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
S+ G K Y R+R GIGRPP +VL +FS+ ER L ++D A
Sbjct: 127 SKSLGTKEYVRVRFGIGRPPGRQDPADYVLSDFSAAERKELEFLVDRAA 175
>gi|222152207|ref|YP_002561382.1| peptidyl-tRNA hydrolase [Streptococcus uberis 0140J]
gi|254783891|sp|B9DSP2|PTH_STRU0 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|222113018|emb|CAR40326.1| peptidyl-tRNA hydrolase [Streptococcus uberis 0140J]
Length = 189
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 91/154 (59%), Gaps = 3/154 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y +HNIGFM ID I + +K F A + ++ + +KP
Sbjct: 4 MIVGLGNPGSKYDNTKHNIGFMAIDTIVKNLDINFTEEKNFKALVGSTFINQEKIYFVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ ++ +Y + +++ +VI+DDLD++ G +R + G GHNG+KSI
Sbjct: 64 VTFMNNSGIAVKALLTYYNIS-IQDLIVIYDDLDMEVGKIRFRQKGSAGGHNGIKSIISH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + + R++IGIGRP +I HVLG F +
Sbjct: 123 IGTQEFDRIKIGIGRPKQGMTVINHVLGKFDQDD 156
>gi|23097516|ref|NP_690982.1| peptidyl-tRNA hydrolase [Oceanobacillus iheyensis HTE831]
gi|34222739|sp|Q8CXP8|PTH_OCEIH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|22775739|dbj|BAC12017.1| stage V sporulation protein C (peptidyl-tRNA hydrolase (PTH))
[Oceanobacillus iheyensis HTE831]
Length = 187
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 110/175 (62%), Gaps = 2/175 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG ++ + RHNIGF ID + H + KF + S DG + IL++
Sbjct: 1 MKLIVGLGNPGRKFKKTRHNIGFFVIDELLQRHKWKLNNSKFEGDYSIEHFDGEKVILLQ 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ +M+++ + ++++ +V++DDLDL G +RL+ GG GHNG++S +
Sbjct: 61 PQTYMNLSGKSISPLMDYFDI-DVDDVIVVYDDLDLPTGKIRLRQKGGHGGHNGVRSTID 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K++KR+R+GIGRP + +I +VLG F E + ++ A ++ K
Sbjct: 120 HLGTKDFKRVRLGIGRPTNATPVIDYVLGKFPKQETTAVTDSVEKAADAIEAWIK 174
>gi|86130925|ref|ZP_01049524.1| Peptidyl-tRNA hydrolase [Dokdonia donghaensis MED134]
gi|85818336|gb|EAQ39496.1| Peptidyl-tRNA hydrolase [Dokdonia donghaensis MED134]
Length = 209
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 95/178 (53%), Gaps = 11/178 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAE----ISEGQLDGLRTI 57
F++ GLGN G +Y RHNIGF +D F A + F E I+ ++ G I
Sbjct: 25 FLIVGLGNIGPKYENTRHNIGFKVVD-----AFAKAQETTFETEKLGDIARTRVKGKTVI 79
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KP TFMNLSG+++ + K+P +EN LVI DDL+L+FGT+R+KT G D GHNGLK
Sbjct: 80 LLKPNTFMNLSGKAIRYWLQQEKVP-VENLLVITDDLNLEFGTIRVKTKGSDGGHNGLKD 138
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ Y R R GI + +VLG ++ E L +D + + K
Sbjct: 139 TQAQLNTTKYNRFRFGISDQFSKGRQVDYVLGEWTPDENAALPERLDKASEVIASFVK 196
>gi|229551615|ref|ZP_04440340.1| aminoacyl-tRNA hydrolase [Lactobacillus rhamnosus LMS2-1]
gi|258509517|ref|YP_003172268.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
gi|258540717|ref|YP_003175216.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus Lc 705]
gi|229315019|gb|EEN80992.1| aminoacyl-tRNA hydrolase [Lactobacillus rhamnosus LMS2-1]
gi|257149444|emb|CAR88417.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
gi|257152393|emb|CAR91365.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus Lc 705]
gi|259650785|dbj|BAI42947.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
Length = 185
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 97/164 (59%), Gaps = 7/164 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HN+GFM +D + K +F A + ++ + L+K
Sbjct: 1 MKMIVGLGNPGRQYAGTKHNMGFMVVDGLAQRMGLTLNKLEFDAATATTRVHDEKVFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ ++M +Y++ L+ LV+HDD+DL G LRL+ G GHNG+K I
Sbjct: 61 PQTYMNASGRAVRQLMMYYQI-RLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G + + RL+IGI + P ++ VL F+ ++ P+ID
Sbjct: 120 ATGSDEFYRLKIGI-QHPQRQRVVDWVLTPFAKTDQ----PVID 158
>gi|330429326|gb|AEC20660.1| peptidyl-tRNA hydrolase [Pusillimonas sp. T7-7]
Length = 198
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 103/192 (53%), Gaps = 16/192 (8%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIH-----SFHFFPAWKKKFHAEISEGQLDGLRTI 57
++ GLGNPG EY RHN GF D + SF +K F A +++G+ +G I
Sbjct: 7 LIIGLGNPGPEYEATRHNAGFWLADHLADDLKASFTL----EKAFSAWVAKGRYEGEAVI 62
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
+ KP TFMN SGQ+ ++ FYKL E LV+HD+LDL G ++LK GGG AGHNGL+
Sbjct: 63 IAKPATFMNRSGQAAGALLRFYKLVP-EQVLVLHDELDLLPGQVKLKRGGGHAGHNGLRD 121
Query: 118 I-SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLP----IIDNIARSLPLL 172
I S ++ RLRIGIG P T + + V +P R L +ID S P L
Sbjct: 122 IQSAFSSPDFWRLRIGIGH-PRTLGLAQQVAAFVLNPPRREELTQIEGVIDRCRASAPAL 180
Query: 173 AKREDVSFLNHI 184
+ E N +
Sbjct: 181 LRGEFAQATNQL 192
>gi|68536582|ref|YP_251287.1| peptidyl-tRNA hydrolase [Corynebacterium jeikeium K411]
gi|260577725|ref|ZP_05845660.1| peptidyl-tRNA hydrolase 2 (PTH 2) [Corynebacterium jeikeium ATCC
43734]
gi|119390905|sp|Q4JU38|PTH2_CORJK RecName: Full=Peptidyl-tRNA hydrolase 2; Short=PTH 2
gi|68264181|emb|CAI37669.1| pthB [Corynebacterium jeikeium K411]
gi|258604120|gb|EEW17362.1| peptidyl-tRNA hydrolase 2 (PTH 2) [Corynebacterium jeikeium ATCC
43734]
Length = 240
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 96/157 (61%), Gaps = 7/157 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTIL 58
+IV GLGNPG +Y + RHNIG+ IDR+ + + P +K HA + ++ +L
Sbjct: 48 WIVIGLGNPGAKYADTRHNIGYWPIDRLVERYEAQWLPVEGQKAHAALI--TVEETPVLL 105
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++ T+MN SG+++ + + LP E +V HD+LD+ G +R+K GG+ GHNGL+S+
Sbjct: 106 LRSTTYMNNSGEAVGPLASALSLP-AERIIVCHDELDIAAGQVRIKDKGGEGGHNGLRSM 164
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ + G ++Y R+R+GIGRPP +I VL F +
Sbjct: 165 TAELGTQHYVRVRMGIGRPPKGTSVIDFVLSPFEEAD 201
>gi|238899116|ref|YP_002924798.1| peptidyl-tRNA hydrolase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466876|gb|ACQ68650.1| peptidyl-tRNA hydrolase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 197
Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 99/188 (52%), Gaps = 6/188 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NP EY + RHN G + ++ H K KF ++ +L+ P
Sbjct: 6 LIVGLANPTAEYSQTRHNAGAWYVKQLSERHNLSLKKSPKFFGYTGRLKIANQNVLLMIP 65
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
FMNLSG ++ + FY+ LP E LV HD+LD G + KTGGG+AGHNGLK I +
Sbjct: 66 DVFMNLSGTAVFAITKFYQILP--EELLVAHDELDFLPGQAKFKTGGGNAGHNGLKDIQK 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P DT+ ++ VLG E+ + ID +L K +
Sbjct: 124 KLGNNSEFHRLRIGIGHPGDTSKVVGFVLGKPPVSEKKLIDHAIDECLTFTEILFKENMI 183
Query: 179 SFLNHIVS 186
++H+ S
Sbjct: 184 KAVHHLHS 191
>gi|303256349|ref|ZP_07342365.1| aminoacyl-tRNA hydrolase [Burkholderiales bacterium 1_1_47]
gi|330999044|ref|ZP_08322769.1| aminoacyl-tRNA hydrolase [Parasutterella excrementihominis YIT
11859]
gi|302861078|gb|EFL84153.1| aminoacyl-tRNA hydrolase [Burkholderiales bacterium 1_1_47]
gi|329575786|gb|EGG57312.1| aminoacyl-tRNA hydrolase [Parasutterella excrementihominis YIT
11859]
Length = 201
Score = 114 bits (286), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGN G Y RHN GF +D + + + +KF ++++ ++ G+ IL+KP
Sbjct: 8 LIVGLGNIGDAYKGTRHNAGFHFVDEVANEYGARFQADRKFFGDVAKARIGGVEVILLKP 67
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T MNLSG+++ V FYK+ E LV HD+LDL GT RLK GGG AGHNGLKSI
Sbjct: 68 STLMNLSGKAVAAVSAFYKITPSE-ILVAHDELDLLPGTARLKIGGGSAGHNGLKSIVSC 126
Query: 122 CG-KNYKRLRIGIGRPPD 138
G ++ RLRIGIG P D
Sbjct: 127 LGSSDFVRLRIGIGHPRD 144
>gi|87125090|ref|ZP_01080937.1| Peptidyl-tRNA hydrolase [Synechococcus sp. RS9917]
gi|86167410|gb|EAQ68670.1| Peptidyl-tRNA hydrolase [Synechococcus sp. RS9917]
Length = 207
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 107/190 (56%), Gaps = 10/190 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
++ GLGNPG Y RHN+GFM ++ + + A++ K +++E R L+
Sbjct: 8 LLVGLGNPGDRYHGTRHNVGFMALEAL-ARRNASAFRSMAKLQGQVAEIGFGPGRLRLLM 66
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +++++ ++ LV+ DD+DL G LRL+ GG GHNGL+S +
Sbjct: 67 PQTFMNESGRSIRAALDWFQF-DVNQVLVVVDDMDLPLGRLRLRAKGGAGGHNGLRSTIQ 125
Query: 121 KCG-KNYKRLRIGIGRPPDTAH-----IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G + + RLRIGIG P TA + HVLG FS E+ L +I+ + + + + +
Sbjct: 126 HLGTEAFARLRIGIGAPGRTAEERRARTVSHVLGRFSQAEQPLLDQVIEAVVQGVDQIQR 185
Query: 175 REDVSFLNHI 184
+ NH+
Sbjct: 186 QGLERAGNHL 195
>gi|317486442|ref|ZP_07945269.1| peptidyl-tRNA hydrolase [Bilophila wadsworthia 3_1_6]
gi|316922352|gb|EFV43611.1| peptidyl-tRNA hydrolase [Bilophila wadsworthia 3_1_6]
Length = 198
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 99/158 (62%), Gaps = 8/158 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI--HSFHFFPAWKKKFHAEISEGQLDGL--RTIL 58
++ GLGNPG +Y RHN+GF+ +D + + + KF E+ + L G + ++
Sbjct: 6 LIVGLGNPGKQYESTRHNMGFLFVDELLREAKNVSSMSGDKFRCELWKAALPGSPDQWLI 65
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
KPQTFMNLSG+ + + +++L EN LV+HD+LD+ G ++ K GGG+AGHNGLKSI
Sbjct: 66 AKPQTFMNLSGECVQPLAAWHRLLP-ENILVVHDELDIAPGRMKFKKGGGNAGHNGLKSI 124
Query: 119 SEKCGK-NYKRLRIGIGRPPDTAH-IIRHVLGNFSSPE 154
+++ G ++ RLR+GIGR P + VLG SPE
Sbjct: 125 TQRLGTPDFYRLRLGIGRSPHGGEDTVNWVLGRL-SPE 161
>gi|116072067|ref|ZP_01469335.1| peptidyl-tRNA hydrolase [Synechococcus sp. BL107]
gi|116065690|gb|EAU71448.1| peptidyl-tRNA hydrolase [Synechococcus sp. BL107]
Length = 205
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 101/182 (55%), Gaps = 12/182 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+V GLGNPG +Y RHNIGFM ++R+ F F + K H +++ R L+
Sbjct: 7 LVVGLGNPGSKYDGTRHNIGFMALERLALREGFSF--RQQAKLHGLVADMGFGDQRLRLL 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
PQTFMN SG+S+ +++Y E+ +++ DD+DL G LRL+ G GHNGL+S
Sbjct: 65 MPQTFMNDSGRSVRAALDWYGF-QPEDIVLLVDDMDLPLGRLRLRAQGSAGGHNGLRSTI 123
Query: 120 EKCGKN-YKRLRIGIGRPPDT-----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
+ G + RLRIGIG P + A + HVLG FS E+ + ++D + L L
Sbjct: 124 QHLGTQVFPRLRIGIGAPAENPAERRARTVSHVLGPFSRAEQPCVDAVLDAVLDGLDRLK 183
Query: 174 KR 175
K+
Sbjct: 184 KQ 185
>gi|326802494|ref|YP_004320313.1| peptidyl-tRNA hydrolase [Sphingobacterium sp. 21]
gi|326553258|gb|ADZ81643.1| Peptidyl-tRNA hydrolase [Sphingobacterium sp. 21]
Length = 186
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 97/169 (57%), Gaps = 3/169 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY + RHNIGFM D + F + +A SE + G +IKP
Sbjct: 3 YLIVGLGNIGQEYADTRHNIGFMVADELVK-EFGAGYSTLKYAFYSEFKHKGRTVHVIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M+ K+P + N LVI DDL + FG++R+K G AGHNGLK+I
Sbjct: 62 TTYMNLSGKAVNYWMHELKIP-ISNVLVIVDDLAIPFGSVRIKPKGSAAGHNGLKNIEAL 120
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
C G+ Y RLR GIG I +VLG F E+ L +I + ++
Sbjct: 121 CGGQQYPRLRFGIGDNYPKGRQIDYVLGPFDQEEKADLPALIAHSVEAI 169
>gi|331701923|ref|YP_004398882.1| peptidyl-tRNA hydrolase [Lactobacillus buchneri NRRL B-30929]
gi|329129266|gb|AEB73819.1| Peptidyl-tRNA hydrolase [Lactobacillus buchneri NRRL B-30929]
Length = 186
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 99/170 (58%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN GFM +++ H +K +A+ G ++ + ++++
Sbjct: 1 MKMIVGLGNIGPQYDGTRHNTGFMVVEQFAKSHDISIKTRKMNAKYGSGFVNNTKVMVVE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +M+++ + ++E+ +++HDD+DL G +R+K G GHNG+KSI
Sbjct: 61 PTTFMNDSGLAVRPLMDYFDV-SIEDLIIVHDDMDLPVGKIRIKDKGSAGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +N+ R+R+GI P ++ +VLG FS + D+ +L
Sbjct: 120 SVGTQNFDRIRVGIDHPDHGNTVVNYVLGRFSKDQAPMFKQAADHAVNAL 169
>gi|284051522|ref|ZP_06381732.1| peptidyl-tRNA hydrolase [Arthrospira platensis str. Paraca]
gi|291569168|dbj|BAI91440.1| peptidyl-tRNA hydrolase [Arthrospira platensis NIES-39]
Length = 201
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 101/177 (57%), Gaps = 9/177 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTI-LIK 60
++ GLGNPG +Y RHNIGF +D + + + ++F E ++ + L+K
Sbjct: 7 LIVGLGNPGSKYDRTRHNIGFEAVDFLADKWGANLSENRRFQGVFGEAKMRSHNKLYLLK 66
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ V+++YKLP E+ LVI+DD+DL G LRL+ G GHNG+KS
Sbjct: 67 PLTYMNRSGQAIRSVVDWYKLPP-ESVLVIYDDMDLPVGRLRLRLSGSAGGHNGMKSAIA 125
Query: 121 KCG-KNYKRLRIGIGRPPDTA-----HIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G +N+ RLR+GI +P A I HVLG F ER + ++ + ++ L
Sbjct: 126 HLGTQNFPRLRLGIDKPQPPASSSDRETISHVLGKFPPNERQTMDKLLQQVLEAIEL 182
>gi|284048779|ref|YP_003399118.1| peptidyl-tRNA hydrolase [Acidaminococcus fermentans DSM 20731]
gi|283953000|gb|ADB47803.1| peptidyl-tRNA hydrolase [Acidaminococcus fermentans DSM 20731]
Length = 209
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 100/184 (54%), Gaps = 5/184 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V LGN G EY RHNIGFM D + + AW+K +A E ++ + +I
Sbjct: 1 MKLVVALGNIGREYAGTRHNIGFMTADLLAERWGDTEAWRKADNAFYLEKRMPE-KCWVI 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG ++ + NFY +P E+ LVI DD+DL GTLR++ G GHNGLKSI
Sbjct: 60 KPTTYMNNSGVAVADFANFYHIPP-EDVLVIQDDMDLPVGTLRIRRKGSSGGHNGLKSIE 118
Query: 120 EKCG-KNYKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + Y R+++GIG P +I HVL F ++ + +D A ++ K
Sbjct: 119 RALGSQAYPRIKVGIGHPVHQEQAVISHVLHPFQREDKEKVQEALDQAADAVEAWMKGAA 178
Query: 178 VSFL 181
V L
Sbjct: 179 VGEL 182
>gi|300172730|ref|YP_003771895.1| peptidyl-tRNA hydrolase [Leuconostoc gasicomitatum LMG 18811]
gi|299887108|emb|CBL91076.1| Peptidyl-tRNA hydrolase [Leuconostoc gasicomitatum LMG 18811]
Length = 189
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 91/156 (58%), Gaps = 2/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G EY + RHNIGFM ID S H K A I++ +DG + +L+K
Sbjct: 1 MKYIIGLGNIGLEYDKTRHNIGFMAIDAFASAHSVSFAPSKQFATIAKLTVDGEQVVLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ ++++Y + +V+ DD+DL F LR + G GHNGLKSI
Sbjct: 61 PTTYMNDSGKAVRAILDYYGGDINTDVMVLVDDMDLPFSKLRFRAKGSAGGHNGLKSIMA 120
Query: 121 KCG-KNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPE 154
G + + RL+ G+G P + +I +VLG FS E
Sbjct: 121 HTGSQTFLRLKFGLGHPNHEQQAVIHYVLGKFSRAE 156
>gi|284989493|ref|YP_003408047.1| peptidyl-tRNA hydrolase [Geodermatophilus obscurus DSM 43160]
gi|284062738|gb|ADB73676.1| peptidyl-tRNA hydrolase [Geodermatophilus obscurus DSM 43160]
Length = 195
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTIL 58
F+V GLGNPG Y NRHN+G M +D + + P K+ I EG+L G R +L
Sbjct: 6 FLVVGLGNPGPSYAGNRHNVGAMVLDELAARAGVKLSPGKGKRARTLIGEGRLAGRRVVL 65
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+P ++MN SG + +++++ +P + +V+HD+LD+ F +RLK GGG+ GHNGL+SI
Sbjct: 66 ARPTSYMNESGGPVRGLLDYHSIPP-TDLVVLHDELDIPFAGVRLKRGGGEGGHNGLRSI 124
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+ G K+Y R+R+GIGRPP VL +FS+ ER L
Sbjct: 125 TRSTGTKDYLRVRVGIGRPPGRQDPADFVLKDFSATERKEL 165
>gi|288799716|ref|ZP_06405175.1| aminoacyl-tRNA hydrolase [Prevotella sp. oral taxon 299 str. F0039]
gi|288332964|gb|EFC71443.1| aminoacyl-tRNA hydrolase [Prevotella sp. oral taxon 299 str. F0039]
Length = 187
Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 87/162 (53%), Gaps = 2/162 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG+EY RHN GFM +D + K + ++E L G + L+KP
Sbjct: 4 YLIVGLGNPGYEYDNTRHNAGFMILDAFAKASNI-VFSDKRYGFVAETTLKGKKIFLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + + LVI DDL L G+LRLK G + GHNG I +
Sbjct: 63 TTFMNLSGNAVRYWLNQENIDQ-KRLLVIVDDLALPLGSLRLKASGSNGGHNGTGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G+ Y RLR GIG + VLG F+ E L P ID
Sbjct: 122 IGQQYARLRFGIGNDFSKGKQVDWVLGKFTDEELTTLQPQID 163
>gi|325104424|ref|YP_004274078.1| peptidyl-tRNA hydrolase [Pedobacter saltans DSM 12145]
gi|324973272|gb|ADY52256.1| peptidyl-tRNA hydrolase [Pedobacter saltans DSM 12145]
Length = 215
Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 98/174 (56%), Gaps = 10/174 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH--FFPAWKKKFHAEISEGQLDGLRTILI 59
+++ GLGN G EY +NRHNIGFM +D + F + +H E S G LI
Sbjct: 27 YLIVGLGNIGPEYADNRHNIGFMIVDELAKQEGVKFSMSRHAYHTEFS---YKGRNIHLI 83
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG++L+ M K+ EN LV+ DDL + FG++++K G AGHNGLK+I
Sbjct: 84 KPTTFMNLSGKALVHWMRELKVAQ-ENVLVLVDDLAIPFGSIKIKPKGSSAGHNGLKNIE 142
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ G NY RLR G+ + +VL F E +L +ID RS+ ++
Sbjct: 143 QLLGNSNYSRLRFGVSDNFPKGRQVDYVLSGFDRDELPYLQELID---RSIAMI 193
>gi|167766178|ref|ZP_02438231.1| hypothetical protein CLOSS21_00672 [Clostridium sp. SS2/1]
gi|317499347|ref|ZP_07957617.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 5_1_63FAA]
gi|167712258|gb|EDS22837.1| hypothetical protein CLOSS21_00672 [Clostridium sp. SS2/1]
gi|291560115|emb|CBL38915.1| peptidyl-tRNA hydrolase [butyrate-producing bacterium SSC/2]
gi|316893382|gb|EFV15594.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 188
Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 107/183 (58%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF +D I K A I G + G + +L+K
Sbjct: 1 MKVIVGLGNPGKKYDNTRHNIGFEALDYIADKEGISINTGKHKALIGTGYMGGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+SL +M+FYKL E++++IHDD+DLD G LR++ G GHNGLKSI
Sbjct: 61 PQTFMNLSGESLRPIMDFYKLEP-EDFIIIHDDIDLDVGRLRIRRKGSAGGHNGLKSIIS 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ R++IG+G P + +VLG+F+ E+ D + ++ L+ +
Sbjct: 120 HLGSMDFPRVKIGVGEKPKGYDLADYVLGHFTKEEQAIFAERFDEVYDAVQLIVMGDITE 179
Query: 180 FLN 182
+N
Sbjct: 180 AMN 182
>gi|154494975|ref|ZP_02033980.1| hypothetical protein PARMER_04021 [Parabacteroides merdae ATCC
43184]
gi|154085525|gb|EDN84570.1| hypothetical protein PARMER_04021 [Parabacteroides merdae ATCC
43184]
Length = 187
Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/172 (41%), Positives = 101/172 (58%), Gaps = 6/172 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF ++ + P ++++ A I+ ++ I++KP
Sbjct: 3 YLITGLGNIGSEYLGTRHNIGFRVVNALVEDAGVPFTEERYGA-IARMRIKNCELIILKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ + +P +EN LVI DDL L FGTLRLK G DAGHNGLK+I +
Sbjct: 62 NTFMNLSGNAVRYWLQKENIP-VENLLVIVDDLALPFGTLRLKPKGSDAGHNGLKNIQQL 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + Y RLR GIG I +VLG F PE +P + I R++ ++
Sbjct: 121 LGTQEYSRLRFGIGSNFPRGGQINYVLGKF-PPEELQEMP--EKIKRAVEII 169
>gi|79517018|ref|NP_197484.4| aminoacyl-tRNA hydrolase [Arabidopsis thaliana]
gi|75291353|sp|Q6NLS8|PTHM_ARATH RecName: Full=Peptidyl-tRNA hydrolase, mitochondrial; AltName:
Full=M-PTH; AltName: Full=Mitochondrial CRS2-like
protein; AltName: Full=Mitochondrial RNA splicing
factor; Flags: Precursor
gi|44681342|gb|AAS47611.1| At5g19830 [Arabidopsis thaliana]
gi|45773870|gb|AAS76739.1| At5g19830 [Arabidopsis thaliana]
gi|110735763|dbj|BAE99859.1| peptidyl tRNA hydrolases-like putative protein [Arabidopsis
thaliana]
gi|332005370|gb|AED92753.1| Peptidyl-tRNA hydrolase [Arabidopsis thaliana]
Length = 219
Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 87/156 (55%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHNIGF ID F A + +G + L IL KP
Sbjct: 19 WLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILAKP 78
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QT+MNLSG+S + +YKLP L LV+HDD+ L G LRL+ GG HNGLKS+
Sbjct: 79 QTYMNLSGESSGPLAAYYKLP-LNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNH 137
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + + RLRIGIG+PP +L FS P R
Sbjct: 138 FRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPAR 173
>gi|149921896|ref|ZP_01910340.1| peptidyl-tRNA hydrolase [Plesiocystis pacifica SIR-1]
gi|149817249|gb|EDM76726.1| peptidyl-tRNA hydrolase [Plesiocystis pacifica SIR-1]
Length = 207
Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 111/179 (62%), Gaps = 10/179 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-----PAWKKKFHAEISEGQLDGL-- 54
+++ GLGNPG +Y +NRHN+GFM ++R H P+W+++F + + G
Sbjct: 7 WLIVGLGNPGPKYAKNRHNVGFMVVERFADRHATPGTGGPSWREQFKGKATTVHAGGSIG 66
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R ++++PQTFMNLSG+S+ +++ +P LE +V+HD++D FG + LK GGG GHNG
Sbjct: 67 RCVMLEPQTFMNLSGESVRAAADYHDVP-LERTVVVHDEIDFAFGRVALKRGGGHGGHNG 125
Query: 115 LKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
L++I + GK ++ R+R+G+ R P + VL +FS + F+ ++D R+L L
Sbjct: 126 LRNIIKHLGKPSFLRVRVGVDR-PRHGEVANWVLSDFSGEDASFVDELVDRAERALTCL 183
>gi|313611264|gb|EFR86034.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL F2-208]
Length = 117
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 79/118 (66%), Gaps = 1/118 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSI 117
>gi|300214983|gb|ADJ79399.1| Peptidyl-tRNA hydrolase (PTH) [Lactobacillus salivarius CECT 5713]
Length = 185
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 109/184 (59%), Gaps = 7/184 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN+GFM ++R H K+KF + I+E ++G + I+IK
Sbjct: 1 MKMIVGLGNIGKKYEGTRHNVGFMVVERFVEEHGGNFNKEKFDSLIAELFINGEKIIVIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M+++ L E+ ++ HDD+DL+ G LRL+ G GHNG+KSI
Sbjct: 61 PTTYMNESGRAVRPLMDYFNLTT-EDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + +KR+R+GI P + ++ VL F+ + + D + R++ L E+
Sbjct: 120 HVGTEKFKRVRVGIDHPQKMS-VVDWVLSRFTKEQE---AKLDDGLTRAVAALDDWIEND 175
Query: 179 SFLN 182
F+N
Sbjct: 176 DFMN 179
>gi|254431920|ref|ZP_05045623.1| peptidyl-tRNA hydrolase [Cyanobium sp. PCC 7001]
gi|197626373|gb|EDY38932.1| peptidyl-tRNA hydrolase [Cyanobium sp. PCC 7001]
Length = 211
Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 101/173 (58%), Gaps = 14/173 (8%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFH---AEISEGQLDGLRTIL 58
+V GLGNPG Y RHN+GFM +++ + S + + H A++ +G+ R L
Sbjct: 14 LVVGLGNPGSRYAGTRHNVGFMALEQLVRSAGGSFRQQSRLHGLLADVGQGEQ---RLRL 70
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS- 117
+ PQTFMN SG+S+ ++++ L E LV+ DD+DL G LRL+ G GHNGL+S
Sbjct: 71 LMPQTFMNDSGRSIRAALDWFSLRPAE-LLVVVDDMDLPLGKLRLRASGSAGGHNGLRSA 129
Query: 118 ISEKCGKNYKRLRIGIGRPPDT-----AHIIRHVLGNFSSPERYFLLPIIDNI 165
IS +++ RLRIGIG P + A I HVLG FS+ E+ L +++ +
Sbjct: 130 ISHLGTQDFPRLRIGIGAPAENPAERRARTIGHVLGRFSAAEQPCLEAVLNEV 182
>gi|288574799|ref|ZP_06393156.1| peptidyl-tRNA hydrolase [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570540|gb|EFC92097.1| peptidyl-tRNA hydrolase [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 186
Score = 114 bits (284), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 94/152 (61%), Gaps = 3/152 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL-DGLRTILI 59
M + GLGNPG +Y + RHN+G+M +DR+ A ++KF + I L DG R L+
Sbjct: 1 MKLFVGLGNPGLKYGQTRHNVGWMVVDRLVDELALGAPQEKFKSYIWGPVLMDGERVFLM 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG+++ + + ++ + +LE+ LVI+DD+ LD G +R++ G GHNG+KSI
Sbjct: 61 KPLTYMNASGEAIRDFLRYHPV-DLEDLLVIYDDVALDVGRIRIRARGSAGGHNGMKSII 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNF 150
G RLRIG+G PD ++ VLG F
Sbjct: 120 ACLGFSEIPRLRIGVGPKPDRIPLVDFVLGRF 151
>gi|302342166|ref|YP_003806695.1| peptidyl-tRNA hydrolase [Desulfarculus baarsii DSM 2075]
gi|301638779|gb|ADK84101.1| peptidyl-tRNA hydrolase [Desulfarculus baarsii DSM 2075]
Length = 200
Score = 114 bits (284), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+V GLGNPG Y RHN GFM ++ + H K + +G ++G I PQ
Sbjct: 13 LVVGLGNPGPRYATTRHNAGFMVVEELARRHGVGLVKSGHQSIWGKGLVEGRPVIAALPQ 72
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG+++ ++++Y+LP + +V HDDLDL+ G L++ GG AGH G+ SI
Sbjct: 73 TYMNLSGEAVAALLSYYRLPPTQ-LVVAHDDLDLELGRLKVAARGGAAGHKGVGSIISLL 131
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + + RLR G+GRP I + VL F + +R ++ A L ++
Sbjct: 132 GTDEFARLRFGVGRPRHDEPIEQFVLNGFYADQRELGQKMVQVAADCLEVI 182
>gi|282891671|ref|ZP_06300158.1| hypothetical protein pah_c188o046 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498461|gb|EFB40793.1| hypothetical protein pah_c188o046 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 198
Score = 114 bits (284), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 99/185 (53%), Gaps = 6/185 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG +Y RHNIGF+ + F F A KF +++ + L+ P
Sbjct: 9 LFVGLGNPGKKYEMTRHNIGFLVLQAYAQQFGFTLAPDSKFKGTVAKKKFHSGEVHLLLP 68
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ++ ++FYK+P + + V+ DD DL FG +RL++ G GHNGLKSI
Sbjct: 69 ATFMNESGQAVKRYVDFYKIP-ISSMTVVVDDADLSFGAIRLRSQGSAGGHNGLKSIISH 127
Query: 122 CG-KNYKRLRIGIGRPPDTAH---IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + RLR+GIGRP + + +VL NFS E L + A L L ++
Sbjct: 128 LGTTQFARLRMGIGRPDRESSLDDLADYVLDNFSQNEMPHLASFLQQGANILERLLTQDL 187
Query: 178 VSFLN 182
+ +N
Sbjct: 188 AAAMN 192
>gi|227876325|ref|ZP_03994438.1| aminoacyl-tRNA hydrolase [Mobiluncus mulieris ATCC 35243]
gi|269976099|ref|ZP_06183098.1| peptidyl-tRNA hydrolase [Mobiluncus mulieris 28-1]
gi|306817216|ref|ZP_07450963.1| aminoacyl-tRNA hydrolase [Mobiluncus mulieris ATCC 35239]
gi|227843098|gb|EEJ53294.1| aminoacyl-tRNA hydrolase [Mobiluncus mulieris ATCC 35243]
gi|269935692|gb|EEZ92227.1| peptidyl-tRNA hydrolase [Mobiluncus mulieris 28-1]
gi|304650018|gb|EFM47296.1| aminoacyl-tRNA hydrolase [Mobiluncus mulieris ATCC 35239]
Length = 207
Score = 114 bits (284), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 101/187 (54%), Gaps = 16/187 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI----------HSFHFFPAWKKKFHAEISEGQL 51
++V GLGNPG EY + RHN G+M DR S A K + G +
Sbjct: 8 WLVVGLGNPGIEYAQTRHNCGYMVTDRFVESVGGKYRNQSLGRGGAMAKVADIRLGYG-I 66
Query: 52 DGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG 111
D + I+ T+MN SG + +++ FY++ + + +V+HDD+DL+F +LK GG + G
Sbjct: 67 DAPQVIVAHTGTYMNTSGPVVGQLLKFYQI-DTAHLVVVHDDIDLNFRCAKLKVGGSNGG 125
Query: 112 HNGLKSISEKCG-KNYKRLRIGIGRPPD---TAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
HNGLKSI + G K++ RLRIG+GRPP ++ VLG F E+ L D +
Sbjct: 126 HNGLKSIQQTLGTKDFARLRIGVGRPPSRELGGDVVNWVLGRFPKSEKANLEEFFDRAVQ 185
Query: 168 SLPLLAK 174
+ +A+
Sbjct: 186 CINDVAE 192
>gi|158338610|ref|YP_001519787.1| peptidyl-tRNA hydrolase [Acaryochloris marina MBIC11017]
gi|158308851|gb|ABW30468.1| peptidyl-tRNA hydrolase [Acaryochloris marina MBIC11017]
Length = 206
Score = 114 bits (284), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 94/166 (56%), Gaps = 6/166 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEG-QLDGLRTILIK 60
++ GLGNPG +Y RHNIGF IDR+ + +++F E EG G R L+K
Sbjct: 10 LIVGLGNPGSKYDRTRHNIGFAFIDRLAQHWQISLTSERRFQGEYGEGLGGQGRRVRLLK 69
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQS+ V++++KL + LVI+D++ L G LRL+ G GHNG++SI
Sbjct: 70 PHTYMNNSGQSIRAVIDWFKL-EPTSVLVIYDEMALPVGKLRLRLKGSAGGHNGMRSIIS 128
Query: 121 KCGK-NYKRLRIGIGRPPDT--AHIIRHVLGNFSSPERYFLLPIID 163
G RLRIGIG PP I VLG F+ E L ++D
Sbjct: 129 HLGTPEVPRLRIGIGSPPPERGKDTISFVLGRFAPLENQLLPAVLD 174
>gi|283955210|ref|ZP_06372711.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 414]
gi|283793247|gb|EFC32015.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 414]
Length = 181
Score = 114 bits (284), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 110/189 (58%), Gaps = 10/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGN G EY RHN+GFM ID + + KF E+ + +L+
Sbjct: 1 MILVVGLGNIGAEYENTRHNVGFMLIDLLLKENNSINLTNSKFKGELFKISS---SLLLL 57
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG S+ V +FYK E +VIHDD+D++ G LR K GG GHNGLKSI
Sbjct: 58 KPSTYMNNSGLSVKAVNDFYKC---ERIIVIHDDIDINLGALRFKKGGSSGGHNGLKSID 114
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG +Y+R+RIG+G+ + +I HVLG F S E L +++N +L L + +D+S
Sbjct: 115 SLCGSDYERVRIGVGKGEN---VISHVLGKFKSEEEIILSKVLENAKEALLELIRNDDLS 171
Query: 180 FLNHIVSVR 188
++ S++
Sbjct: 172 AISSKYSLK 180
>gi|149199259|ref|ZP_01876297.1| peptidyl-tRNA hydrolase [Lentisphaera araneosa HTCC2155]
gi|149137684|gb|EDM26099.1| peptidyl-tRNA hydrolase [Lentisphaera araneosa HTCC2155]
Length = 214
Score = 114 bits (284), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 101/175 (57%), Gaps = 3/175 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG Y RHN+GF ID + + F +KKK+ AE +E + +G + I IKP
Sbjct: 16 YLICGLGNPGSSYENTRHNVGFKAID-LFAEKFSLKFKKKWRAEYAECEDEGNKYIFIKP 74
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+++ + + E +VI+D++ L G LRL+ GG GHNG+KSI +
Sbjct: 75 MTYMNNSGEAIKKFAKKNSVK-AEEIIVIYDEMSLKVGRLRLRLGGSAGGHNGVKSILQY 133
Query: 122 -CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G ++ R+RIG+ P A I +VL +F+ E + P + ++ +L +
Sbjct: 134 FGGADFYRVRIGVDHPGKGADIADYVLSDFTLSEMALISPAVSASVDAVLMLCTK 188
>gi|254821213|ref|ZP_05226214.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare ATCC 13950]
Length = 191
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 106/174 (60%), Gaps = 5/174 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF--HFFPAWKKKFHAEISEGQLDGLRTILI 59
+V GLGNPG Y RHN+GFM D + + F A K+ AEI G+L G ++
Sbjct: 5 LLVVGLGNPGDNYARTRHNVGFMVADLLAARMGSKFKAHKRS-GAEIVSGRLLGHSVVVA 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+ +MN SG+ + + FY + + +VIHDDLDLDFG +RLK GGG+ GHNGL+S++
Sbjct: 64 KPRCYMNESGRQVGPLAKFYSV-TPGDIIVIHDDLDLDFGRIRLKIGGGEGGHNGLRSLA 122
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K+++R+RIGIGRPP VL NF++ ER + I + A + LL
Sbjct: 123 NALGSKDFQRVRIGIGRPPGRKDPAAFVLENFNAAERTEVPTICEQAADATELL 176
>gi|227509304|ref|ZP_03939353.1| peptidyl-tRNA hydrolase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227191234|gb|EEI71301.1| peptidyl-tRNA hydrolase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 189
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 99/170 (58%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN GFM ++ H +K +A++ ++G + ++++
Sbjct: 4 MKMIVGLGNIGPQYDGTRHNTGFMVVEEFAKKHGISIKTRKMNAKMGSAFVNGQKVLVVE 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +M+++++ N ++ +V+HDD+DL G +R+K G GHNG+KS+
Sbjct: 64 PTTFMNDSGIAVKPLMSYFEIEN-KDVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSLIN 122
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +++ R+R+GI P ++ +VLG FS + DN +L
Sbjct: 123 NLGTEHFSRIRVGIAHPDKNNTVVNYVLGRFSKSQLPEFKIATDNAVNAL 172
>gi|330995950|ref|ZP_08319845.1| aminoacyl-tRNA hydrolase [Paraprevotella xylaniphila YIT 11841]
gi|329574289|gb|EGG55864.1| aminoacyl-tRNA hydrolase [Paraprevotella xylaniphila YIT 11841]
Length = 187
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 90/154 (58%), Gaps = 3/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G+EY RHNIGF +D + K++ A ++ L G + +L+KP
Sbjct: 3 YLIVGLGNIGNEYAGTRHNIGFRVLDALAKASNLVFEDKRYGA-VASLSLKGQQLVLLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ MN +P LE LV+ DDL L FG LR+K G DAGHNGLK+I+
Sbjct: 62 STYMNLSGNAVRYWMNKENVP-LERILVVVDDLALPFGALRMKPSGSDAGHNGLKNIASV 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + Y RLR GIG I VLG F+ +
Sbjct: 121 LGTQAYARLRFGIGNDFPRGGQIGFVLGQFTEED 154
>gi|299771340|ref|YP_003733366.1| peptidyl-tRNA hydrolase [Acinetobacter sp. DR1]
gi|298701428|gb|ADI91993.1| peptidyl-tRNA hydrolase [Acinetobacter sp. DR1]
Length = 193
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF I+++ + + KFH G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFIEQLANKYGITLKNDPKFHGISGRGNIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS++ FY++ E L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 TTFMNRSGQSVVPFAKFYQIAP-EAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG S E+ + ID+ + LL + + +
Sbjct: 125 IGSNFHRLRIGIGHPGSKERVSGHVLGKAPSSEQSLMDAAIDHALSKVKLLVQGQVPQAM 184
Query: 182 NHI 184
N I
Sbjct: 185 NQI 187
>gi|255020868|ref|ZP_05292924.1| Peptidyl-tRNA hydrolase [Acidithiobacillus caldus ATCC 51756]
gi|254969659|gb|EET27165.1| Peptidyl-tRNA hydrolase [Acidithiobacillus caldus ATCC 51756]
Length = 193
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 97/157 (61%), Gaps = 5/157 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILI 59
+++AGLGNPG EY RHN+GF C+ + + P W + +F AE+++G L G R +L
Sbjct: 5 WLLAGLGNPGEEYAHTRHNVGFWCVRDLAATVGAP-WGREARFKAELAQGLLAGQRLVLC 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+PQ +MN SG + V FYK+P E +V+HDDLDL G RLK GGG+ GHNGL+ +
Sbjct: 64 QPQDYMNRSGGPVQSVAAFYKIPP-ERIVVVHDDLDLLPGVARLKFGGGNGGHNGLRDLD 122
Query: 120 EKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G N Y RLR+GIG P ++ +VLG +R
Sbjct: 123 RALGTNAYWRLRLGIGHPGHKDRVVAYVLGKPKPEDR 159
>gi|298372305|ref|ZP_06982295.1| aminoacyl-tRNA hydrolase [Bacteroidetes oral taxon 274 str. F0058]
gi|298275209|gb|EFI16760.1| aminoacyl-tRNA hydrolase [Bacteroidetes oral taxon 274 str. F0058]
Length = 188
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF +DR+ K + I+EG++ + IL+KP
Sbjct: 3 YLIVGLGNIGDEYAHTRHNIGFDTLDRLAEILNVSFDVNKRYGAIAEGKIKNRQVILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+++ + + + N LV+ DDL L GT+RL+ G DAGHNGLK+I +
Sbjct: 63 FTYMNESGKAVRYWLQKENI-GVANLLVVVDDLALPLGTIRLRGKGSDAGHNGLKNIEQL 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+NY RLR GIG I++VLG FS+ E+
Sbjct: 122 IATQNYARLRFGIGNDFPQGAQIQYVLGRFSAEEQ 156
>gi|209527283|ref|ZP_03275793.1| Aminoacyl-tRNA hydrolase [Arthrospira maxima CS-328]
gi|209492271|gb|EDZ92616.1| Aminoacyl-tRNA hydrolase [Arthrospira maxima CS-328]
Length = 201
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 100/177 (56%), Gaps = 9/177 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDG-LRTILIK 60
++ GLGNPG +Y RHNIGF +D + + + ++F E ++ + L+K
Sbjct: 7 LIVGLGNPGSKYDRTRHNIGFEAVDFLADKWGATLSENRRFQGVFGEAKMRSHDKLYLLK 66
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ V+++YKLP E+ LVI+DD+DL G LRL+ G GHNG+KS
Sbjct: 67 PLTYMNRSGQAIRSVVDWYKLPP-ESVLVIYDDMDLPVGRLRLRLSGSAGGHNGMKSAIA 125
Query: 121 KCG-KNYKRLRIGIGRPPDTA-----HIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G +N+ RLR+GI +P I HVLG F ER + ++ + ++ L
Sbjct: 126 HLGTQNFPRLRLGIDKPQAAVLNHDRETISHVLGKFPPNERQTMDKLLQQVLEAIEL 182
>gi|116626136|ref|YP_828292.1| peptidyl-tRNA hydrolase [Candidatus Solibacter usitatus Ellin6076]
gi|122251816|sp|Q01QR3|PTH_SOLUE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116229298|gb|ABJ88007.1| peptidyl-tRNA hydrolase [Candidatus Solibacter usitatus Ellin6076]
Length = 196
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 89/134 (66%), Gaps = 2/134 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++AGLGNPG +Y + HN+GF+ +DR+ +K A I G++DG + +L K
Sbjct: 1 MFLLAGLGNPGEQYALSPHNLGFLVVDRLAEQFGIRVTRKDSKALIGLGEIDGHQVMLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+SL +M +++ + N +VI+D+LDL +G L++K G AGHNG+KS+ +
Sbjct: 61 PQTFMNLSGESLAPLMEKHQI-EISNLVVIYDELDLPWGALKIKPKGSAAGHNGMKSVIQ 119
Query: 121 KCGKN-YKRLRIGI 133
+ R+R+GI
Sbjct: 120 WFKTSEIVRVRLGI 133
>gi|126662579|ref|ZP_01733578.1| peptidyl-tRNA hydrolase [Flavobacteria bacterium BAL38]
gi|126625958|gb|EAZ96647.1| peptidyl-tRNA hydrolase [Flavobacteria bacterium BAL38]
Length = 206
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 96/177 (54%), Gaps = 12/177 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G EY RHNIGF +D I + K E++E ++ G +L+KP
Sbjct: 22 FLIVGLGNIGSEYANTRHNIGFKILDYIANQEGISFQTVKL-GEVAELKIKGRTLLLLKP 80
Query: 62 QTFMNLSGQSL---LEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
T+MNLSG+++ LE N K EN LVI DDL+L FGT+R+KT G D GHNGLK+I
Sbjct: 81 NTYMNLSGKAVKYWLEKENIEK----ENMLVITDDLNLAFGTIRIKTKGSDGGHNGLKNI 136
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL---LPIIDNIARSLPL 171
Y R R GI + +VLG + + E+ L L I I +S L
Sbjct: 137 QLLLNSTEYPRFRFGISDAFKKGQQVNYVLGEWDAEEKEKLKERLEISSEIVKSFAL 193
>gi|227485005|ref|ZP_03915321.1| aminoacyl-tRNA hydrolase [Anaerococcus lactolyticus ATCC 51172]
gi|227237002|gb|EEI87017.1| aminoacyl-tRNA hydrolase [Anaerococcus lactolyticus ATCC 51172]
Length = 195
Score = 113 bits (283), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 114/189 (60%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+ + GLGNPG +Y RHN+GFM ID + + + K KF + +G++ G + +LIK
Sbjct: 1 MYYIVGLGNPGLQYENTRHNVGFMTIDYLANKYNIDVRKLKFKSLYGQGEISGHKVMLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ E+ NFYK +++ +VI+DD+D+DFGT+R++ G HNG+KSI
Sbjct: 61 PQTYMNNSGEAVRELRNFYKF-DIDKLIVIYDDIDIDFGTVRIRKKGSAGSHNGMKSIIY 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + + R+++ IG+ P+ + VL FS E L I A+ + ++ K +
Sbjct: 120 QIQDDKFPRIKVSIGKKPEKWDLANFVLSGFSKDEVSILEDEIRLAAKGIEIILKEDIDM 179
Query: 180 FLNHIVSVR 188
+N SV+
Sbjct: 180 AMNKCNSVK 188
>gi|89898002|ref|YP_515112.1| peptidyl-tRNA hydrolase [Chlamydophila felis Fe/C-56]
gi|119390923|sp|Q255S1|PTH_CHLFF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|89331374|dbj|BAE80967.1| tRNA hydrolase peptidyl [Chlamydophila felis Fe/C-56]
Length = 183
Score = 113 bits (283), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 96/161 (59%), Gaps = 10/161 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI----HSFHFFPAWKKKFHAEISEGQLDGLRT 56
M +VA +GNPG +Y RHNIGF+C DR+ HF K ++I++ +
Sbjct: 3 MLVVA-IGNPGRQYTWTRHNIGFLCADRLLQEFSGVHFKET--PKLFSDIAKVESSQGTV 59
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
I IKP+T++NLSG+++L V +Y + + LV+ DD++ FG +RL+ G GH G+K
Sbjct: 60 IFIKPRTYVNLSGKAVLAVKEYYNIAT-DRILVLADDVNQPFGKVRLRQSAGGGGHKGIK 118
Query: 117 SISEKCGKN-YKRLRIGIGRPP-DTAHIIRHVLGNFSSPER 155
SI++ G N Y +LR+G+GRP + + VLG F+ E+
Sbjct: 119 SITQSLGSNDYWQLRLGVGRPQREDVELSDFVLGQFTEEEQ 159
>gi|294649569|ref|ZP_06726989.1| aminoacyl-tRNA hydrolase [Acinetobacter haemolyticus ATCC 19194]
gi|292824556|gb|EFF83339.1| aminoacyl-tRNA hydrolase [Acinetobacter haemolyticus ATCC 19194]
Length = 193
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++++ + KFH GQ++G L+ P
Sbjct: 6 LIVGLGNPGKEYAQTRHNAGFWFVEQLADRYGISLKADPKFHGFSGRGQIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS+ FY++ + E+ LV HD+LD+D G +RLK+GGG GHNGL+ I
Sbjct: 66 TTFMNRSGQSVAPFAKFYQI-SPESILVAHDELDMDPGVIRLKSGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVL S E++ + ID+ + LL + +
Sbjct: 125 IGANFHRLRIGIGHPGSKERVSGHVLNKAPSSEQHLMDAAIDHALSKVKLLVDGQVSLAM 184
Query: 182 NHI 184
N I
Sbjct: 185 NQI 187
>gi|119390990|sp|Q21XW1|PTH_RHOFD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 207
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 98/179 (54%), Gaps = 4/179 (2%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTF 64
GLGNPG EY RHN GF +D + A K +H ++ ++G L+KPQTF
Sbjct: 7 GLGNPGPEYEFTRHNAGFWWLDAVARELKASLAMDKTYHGLVTRVTVNGQAVWLLKPQTF 66
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK 124
MNLSG+S+ + F+K+ E LV HD+LD+ G +LK GG AGHNGL+ I + G
Sbjct: 67 MNLSGKSVAALARFFKIEPQE-ILVAHDELDIVPGEAKLKLGGSHAGHNGLRDIHAQLGT 125
Query: 125 -NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDVSFL 181
+Y RLR+G+G P + +I VL S R + I +LP LLA D + L
Sbjct: 126 DDYWRLRLGVGHPGVKSEVINWVLKKPSLDHRLAMDQCIARAITALPHLLAGDMDKATL 184
>gi|159036392|ref|YP_001535645.1| aminoacyl-tRNA hydrolase [Salinispora arenicola CNS-205]
gi|157915227|gb|ABV96654.1| Aminoacyl-tRNA hydrolase [Salinispora arenicola CNS-205]
Length = 196
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQL--DGLRTIL 58
++V GLGNPG EY NRHN+GF+ D + K+ AE++EG+L G R +L
Sbjct: 8 WLVVGLGNPGREYAGNRHNVGFLVADLLAERLGARFGRHKRAVAEVAEGRLGFGGPRLVL 67
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG ++ + FYK+P + +HD+LD+ +G +RLK GGG+ GHNG++S+
Sbjct: 68 VKPLTYMNLSGSAVAGLAQFYKVPP-ARVVAVHDELDIPYGQVRLKCGGGEGGHNGVRSM 126
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
++ G K Y R+R G+GRPP VL +F + ER L ++D A
Sbjct: 127 TKSLGTKEYVRVRFGVGRPPARRDPADFVLSDFGTVERKELDFLVDRAA 175
>gi|288817437|ref|YP_003431784.1| peptidyl-tRNA hydrolase [Hydrogenobacter thermophilus TK-6]
gi|288786836|dbj|BAI68583.1| peptidyl-tRNA hydrolase [Hydrogenobacter thermophilus TK-6]
gi|308751044|gb|ADO44527.1| peptidyl-tRNA hydrolase [Hydrogenobacter thermophilus TK-6]
Length = 190
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 98/163 (60%), Gaps = 4/163 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y RHN+GFM ID + ++++ + + ++ G +L KPQ
Sbjct: 4 LLVGLGNPGKKYQHTRHNVGFMVIDELAKKLKLREYREECLSHLYRARIGGRDVLLAKPQ 63
Query: 63 TFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-ISE 120
T+MN SG +++ ++ Y LP+ +V++DDLDL G +RL+ G GH+G++S I E
Sbjct: 64 TYMNNSGLAVINLLEEYSILPD--EMIVVYDDLDLPLGRIRLRLEGSSGGHHGIESIIRE 121
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+ + RL++GIGRP D ++ +VL FS E+ L +++
Sbjct: 122 VKTEKFPRLKVGIGRPKDKNQVVSYVLSPFSEDEQTLLYRVLE 164
>gi|37525972|ref|NP_929316.1| peptidyl-tRNA hydrolase [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|46576711|sp|Q7N5A1|PTH_PHOLL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|36785401|emb|CAE14348.1| peptidyl-tRNA hydrolase [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 196
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + + G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLARSHNQSLKEESKFFGYTARINICGHDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S++ + +FY++ + LV HD+LDL G ++K GG GHNGLK I K
Sbjct: 66 TTFMNLSGKSVVALASFYRI-QPDEILVAHDELDLPPGVAKMKLGGSHGGHNGLKDIQNK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P D ++ VLG + E+ + ID R +L K++
Sbjct: 125 FGNNPNFYRLRIGIGHPGDKNKVVGFVLGKPPASEQQLIDDAIDEARRCTDILMKQDMDK 184
Query: 180 FLNHIVSVR 188
+N + S +
Sbjct: 185 AINRLHSFK 193
>gi|258647537|ref|ZP_05735006.1| aminoacyl-tRNA hydrolase [Prevotella tannerae ATCC 51259]
gi|260852317|gb|EEX72186.1| aminoacyl-tRNA hydrolase [Prevotella tannerae ATCC 51259]
Length = 213
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 94/160 (58%), Gaps = 4/160 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGF +D + + ++ + + ++ ++ R +L+KP
Sbjct: 29 YLIVGLGNIGDEYAETRHNIGFRVLDALATASNL-VFEDRRYGFVTNLRVKNKRLLLLKP 87
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG ++ M K+P +E LV+ DDL L FG LRL+ GG +AGHNGL+SI++
Sbjct: 88 STYMNASGNAVRYWMQKEKIP-VERVLVVVDDLALPFGALRLRAGGSEAGHNGLRSITQC 146
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLP 160
G + Y RLR GIG + VLG F PE +P
Sbjct: 147 LGTQQYARLRFGIGNDFPRGGQVDFVLGKF-GPEDLLAMP 185
>gi|227832713|ref|YP_002834420.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
gi|262182798|ref|ZP_06042219.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
gi|227453729|gb|ACP32482.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
Length = 226
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 91/150 (60%), Gaps = 7/150 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH---FFPAWKKKFHAEISEGQLDGLRTIL 58
+++ GLGNPG +Y RHN+G+M +D + + P + A ++ +L G + +
Sbjct: 40 WLIVGLGNPGAKYAATRHNVGYMAVDDLLAKSGDMLEPVTGHQLSA--AQLELGGTKVVA 97
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++ T+MNLSG + + + EN +VIHD+LDL G +R+K GG + GHNGLKS+
Sbjct: 98 LRSHTYMNLSGDPIAPLAAQLGVA-AENIIVIHDELDLPAGKVRIKKGGNENGHNGLKSL 156
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVL 147
SE+ G ++Y R+RIGIGRPP I VL
Sbjct: 157 SERLGTRDYLRVRIGIGRPPKGGSIPDWVL 186
>gi|163786663|ref|ZP_02181111.1| peptidyl-tRNA hydrolase [Flavobacteriales bacterium ALC-1]
gi|159878523|gb|EDP72579.1| peptidyl-tRNA hydrolase [Flavobacteriales bacterium ALC-1]
Length = 210
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G +Y RHNIGF +D + + +K +I+ ++ G IL+KP
Sbjct: 26 FLIVGLGNIGEKYANTRHNIGFKVLDYLVKTNDTSFETQKL-GDIATVKVKGRTLILLKP 84
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + K+P LEN LV+ DDL+L FG+LRLKT G D GHNGLK +K
Sbjct: 85 STYMNLSGKAIKYWLEKEKVP-LENLLVVTDDLNLPFGSLRLKTKGSDGGHNGLKDTQDK 143
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
Y R R GI + +VLG +S E
Sbjct: 144 LQTTKYNRFRFGISDTFSKGRQVDYVLGEWSDDE 177
>gi|212691831|ref|ZP_03299959.1| hypothetical protein BACDOR_01326 [Bacteroides dorei DSM 17855]
gi|237708037|ref|ZP_04538518.1| peptidyl-tRNA hydrolase [Bacteroides sp. 9_1_42FAA]
gi|237724812|ref|ZP_04555293.1| peptidyl-tRNA hydrolase [Bacteroides sp. D4]
gi|265756186|ref|ZP_06090515.1| peptidyl-tRNA hydrolase [Bacteroides sp. 3_1_33FAA]
gi|212665587|gb|EEB26159.1| hypothetical protein BACDOR_01326 [Bacteroides dorei DSM 17855]
gi|229437007|gb|EEO47084.1| peptidyl-tRNA hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229457865|gb|EEO63586.1| peptidyl-tRNA hydrolase [Bacteroides sp. 9_1_42FAA]
gi|263233777|gb|EEZ19386.1| peptidyl-tRNA hydrolase [Bacteroides sp. 3_1_33FAA]
Length = 187
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF +D + ++ A + L G + IL+KP
Sbjct: 3 YLITGLGNIGEEYRNTRHNIGFTVLDALAKASNLVFTDGRYGATATL-SLKGRQLILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M +P LEN LV+ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STYMNLSGNAVRYWMQKENIP-LENVLVVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G ++Y RLR GIG I VLG+F+ +
Sbjct: 121 LGTQDYARLRFGIGNDFPRGGQIDFVLGHFTDKD 154
>gi|295101118|emb|CBK98663.1| peptidyl-tRNA hydrolase [Faecalibacterium prausnitzii L2-6]
Length = 192
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 100/174 (57%), Gaps = 3/174 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++++AGLGNP +Y RHN GF +D + K KF +G++DG + +L+K
Sbjct: 6 IWLIAGLGNPEPKYDGTRHNTGFAALDYLAGKWGISVSKTKFQGLWGQGEVDGHKVVLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG S+ + F+K+P+ ++ +V+ DD+ D G LR++ G GHNGLKSI
Sbjct: 66 PLTYMNLSGDSIGPLAGFFKIPS-DHVIVLCDDITQDPGKLRIRPSGSAGGHNGLKSIIA 124
Query: 121 KC-GKNYKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ G+N+ R+RIG+G P + + VLG F + L +IA L+
Sbjct: 125 RLGGENFPRIRIGVGAKPRPDYDLADWVLGKFPPDDAKALADRCPDIAAVATLI 178
>gi|116493281|ref|YP_805016.1| peptidyl-tRNA hydrolase [Pediococcus pentosaceus ATCC 25745]
gi|122265255|sp|Q03DZ8|PTH_PEDPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116103431|gb|ABJ68574.1| peptidyl-tRNA hydrolase [Pediococcus pentosaceus ATCC 25745]
Length = 185
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY + RHN GFM +D + H +K + A I++ +++G + +L+K
Sbjct: 1 MKMIVGLGNIGKEYDKTRHNTGFMVVDELAKKHDINNFKVQSDALIADFRVNGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M++Y + +L + +V +DD+D+ G +RL+ G GHNG+KSI
Sbjct: 61 PTTYMNDSGRAVRPLMDYYDV-DLNDMIVAYDDMDMPVGKIRLRQKGSAGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +++ R+R+GI P + ++ +VLG F +
Sbjct: 120 HVGTQSFNRVRVGIDHPTKES-VVDYVLGKFRKEQ 153
>gi|260663739|ref|ZP_05864627.1| peptidyl-tRNA hydrolase [Lactobacillus fermentum 28-3-CHN]
gi|260551790|gb|EEX24906.1| peptidyl-tRNA hydrolase [Lactobacillus fermentum 28-3-CHN]
Length = 186
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 94/157 (59%), Gaps = 4/157 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM ++++ F +K A G ++G + +L+
Sbjct: 1 MKMIVGLGNIGTRYDETRHNAGFMVVEQLARDFRLGAFTHEKVEAVTVTGLINGQKVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ +M +Y + L++ +V+ DDLD+ G ++LK G GHNGLKS+
Sbjct: 61 KPTTFMNESGRAVKPLMEYYDIA-LDDLIVVSDDLDMPVGKIKLKQRGASGGHNGLKSLI 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ G + + R+++GI P ++ HVLG F + ER
Sbjct: 120 DHLGTREFNRVKLGIDHPK-FGSVVSHVLGRFDTEER 155
>gi|319940807|ref|ZP_08015146.1| peptidyl-tRNA hydrolase [Sutterella wadsworthensis 3_1_45B]
gi|319805689|gb|EFW02470.1| peptidyl-tRNA hydrolase [Sutterella wadsworthensis 3_1_45B]
Length = 217
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 89/138 (64%), Gaps = 7/138 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG +Y RHN GF +D + HF ++KF E + ++ G L+
Sbjct: 10 LIVGLGNPGPDYVRTRHNAGFRFVDMLAGKLGAHFHE--ERKFQGETARCRIAGHEVWLL 67
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ + N++K+ E LV HD++DL G +R+K GGG+AGHNGLKSI+
Sbjct: 68 KPLTFMNASGEAVSVMANYFKITPAE-VLVAHDEMDLLPGCMRIKKGGGNAGHNGLKSIT 126
Query: 120 EKCGK-NYKRLRIGIGRP 136
++ G ++ RLR+GIG P
Sbjct: 127 QQLGTPDFWRLRLGIGHP 144
>gi|220933714|ref|YP_002512613.1| Aminoacyl-tRNA hydrolase [Thioalkalivibrio sp. HL-EbGR7]
gi|219995024|gb|ACL71626.1| Aminoacyl-tRNA hydrolase [Thioalkalivibrio sp. HL-EbGR7]
Length = 193
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 99/165 (60%), Gaps = 6/165 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+VAGLGNPG +Y E RHN GF +D R H F + KF E + L G L+
Sbjct: 9 LVAGLGNPGPKYTETRHNAGFWFVDALARRHGGTF--RQENKFAGESARISLGGQEVWLL 66
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQTFMN SGQS+ + FYK+P +E+ LV+HD+LDL G +RLK GGG GHNGL+ I
Sbjct: 67 KPQTFMNRSGQSVKLLATFYKIP-VESILVVHDELDLPPGEVRLKRGGGHGGHNGLRDIM 125
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
GK + RLR+G+G P ++ +VL S E +L ID+
Sbjct: 126 AHLGKEFLRLRLGVGHPGHKDQVVDYVLQRPSRDEEADILRAIDH 170
>gi|332045042|gb|EGI81235.1| peptidyl-tRNA hydrolase [Lacinutrix algicola 5H-3-7-4]
Length = 211
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 88/154 (57%), Gaps = 3/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G +Y RHNIGF +D +K +I+ +L G I +KP
Sbjct: 27 FLIVGLGNIGDKYENTRHNIGFKILDYFAKEESLTFETQKL-GDITTYKLKGRTFIFLKP 85
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++L + K+P LEN LVI DDL+L FG++R+KT G D GHNGLK +K
Sbjct: 86 NTYMNLSGKAILYWLTKEKIP-LENLLVITDDLNLPFGSIRVKTKGSDGGHNGLKDTQDK 144
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
N Y R R GI + +VLG ++ E
Sbjct: 145 LNTNKYNRYRFGISDAFTKGRQVDYVLGEWTEEE 178
>gi|300723043|ref|YP_003712341.1| peptidyl-tRNA hydrolase [Xenorhabdus nematophila ATCC 19061]
gi|297629558|emb|CBJ90161.1| peptidyl-tRNA hydrolase [Xenorhabdus nematophila ATCC 19061]
Length = 196
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 95/175 (54%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + ++ + KF + ++G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWFVDSLAQRYNQSLKEESKFFGYTARININGQDIRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+L + FY++ E LV HD+LDL G ++K GG + GHNGLK I K
Sbjct: 66 TTFMNLSGKSVLTLAGFYRIEPDE-ILVAHDELDLPPGVAKMKLGGSNGGHNGLKDIQNK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
N+ RLRIGIG P D ++ VLG + E+ + ID R +L K
Sbjct: 125 FSNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPASEQQLIDDAIDEALRCTDILIK 179
>gi|328949925|ref|YP_004367260.1| Peptidyl-tRNA hydrolase [Marinithermus hydrothermalis DSM 14884]
gi|328450249|gb|AEB11150.1| Peptidyl-tRNA hydrolase [Marinithermus hydrothermalis DSM 14884]
Length = 194
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 7/169 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG Y RHN+GFM +DR+ W+ + +A ++ L+KP
Sbjct: 4 FLIVGLGNPGPRYARTRHNVGFMILDRLDQ-DLGLDWRTRGNALVARWGA----GWLMKP 58
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + +Y++P L LV+HDDLDL G LR + G G G+ SI
Sbjct: 59 LTYMNLSGEAVAPFVRYYRIP-LARLLVVHDDLDLPLGRLRFRARGSSGGQRGVASIIAH 117
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + RL++GIGRPP VL F+ E + ++D A +
Sbjct: 118 LGSEAFPRLKVGIGRPPAGWSAPDWVLSPFNPEELPLVTRVVDRAAEGV 166
>gi|262280068|ref|ZP_06057853.1| peptidyl-tRNA hydrolase [Acinetobacter calcoaceticus RUH2202]
gi|262260419|gb|EEY79152.1| peptidyl-tRNA hydrolase [Acinetobacter calcoaceticus RUH2202]
Length = 193
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF I+++ + + KFH G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFIEQLANKYGITLKNDPKFHGISGRGNIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS++ FY++ E L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 TTFMNRSGQSVVPFAKFYQIAP-EAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG S E+ + ID+ + LL + + +
Sbjct: 125 IGPNFHRLRIGIGHPGSKERVSGHVLGKAPSSEQSLMDAAIDHALSKVKLLVQGQVPQAM 184
Query: 182 NHI 184
N I
Sbjct: 185 NQI 187
>gi|89900452|ref|YP_522923.1| peptidyl-tRNA hydrolase [Rhodoferax ferrireducens T118]
gi|89345189|gb|ABD69392.1| peptidyl-tRNA hydrolase [Rhodoferax ferrireducens T118]
Length = 225
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 99/182 (54%), Gaps = 4/182 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG EY RHN GF +D + A K +H ++ ++G L+KP
Sbjct: 22 LFVGLGNPGPEYEFTRHNAGFWWLDAVARELKASLAMDKTYHGLVTRVTVNGQAVWLLKP 81
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ + F+K+ E LV HD+LD+ G +LK GG AGHNGL+ I +
Sbjct: 82 QTFMNLSGKSVAALARFFKIEPQE-ILVAHDELDIVPGEAKLKLGGSHAGHNGLRDIHAQ 140
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDVS 179
G +Y RLR+G+G P + +I VL S R + I +LP LLA D +
Sbjct: 141 LGTDDYWRLRLGVGHPGVKSEVINWVLKKPSLDHRLAMDQCIARAITALPHLLAGDMDKA 200
Query: 180 FL 181
L
Sbjct: 201 TL 202
>gi|307111354|gb|EFN59588.1| hypothetical protein CHLNCDRAFT_132968 [Chlorella variabilis]
Length = 301
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 97/156 (62%), Gaps = 2/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++++ GLGNPG ++ RHN G++ + + + + +AE++ +L G +L K
Sbjct: 48 LWLIVGLGNPGPQFAGTRHNAGWLVVAAVARLLDVAVDRFQANAEVARSRLAGKSVLLAK 107
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ + +FY +P E LV++DDLDL GT+RL+ GG GH G+KS++
Sbjct: 108 PLTTMNLSGEAVAGLADFYHIPP-ERVLVVYDDLDLPTGTVRLRPRGGPGGHGGMKSVAA 166
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G N+ R+R+GIGRPP ++ HVL +F ER
Sbjct: 167 HLQGDNFPRIRLGIGRPPAGTTVLDHVLQDFGEAER 202
>gi|303238043|ref|ZP_07324584.1| putative peptidyl-tRNA hydrolase [Prevotella disiens FB035-09AN]
gi|302481739|gb|EFL44793.1| putative peptidyl-tRNA hydrolase [Prevotella disiens FB035-09AN]
Length = 190
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GFM +D ++ K + I+E L G + IL+KP
Sbjct: 4 YLICGLGNPGREYEGTRHNTGFMVLDAFAKASNI-VFEDKRYGFIAETMLKGRKIILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ + K+ LVI D+L L G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLEKEKIDE-RRLLVISDELALPLGAFRLKANGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
G+NY RLR+GIG + VLG ++ + L P ID + A
Sbjct: 122 IGQNYARLRMGIGNDYPKGGQVDWVLGKYTEEDMKTLQPSIDTAVEIIKSFA 173
>gi|193212908|ref|YP_001998861.1| peptidyl-tRNA hydrolase [Chlorobaculum parvum NCIB 8327]
gi|238692644|sp|B3QP08|PTH_CHLP8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|193086385|gb|ACF11661.1| Aminoacyl-tRNA hydrolase [Chlorobaculum parvum NCIB 8327]
Length = 190
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 102/175 (58%), Gaps = 11/175 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHF-FPAWKKKFHAEISEGQLDGLRTIL 58
M ++ GLGNP Y RHN+GF +DR+ SF F A K K+H + + L +L
Sbjct: 1 MKLIIGLGNPEPRYDGTRHNVGFEVVDRLASSFQAPFKAGKGKYHEAKCSHRGESL--LL 58
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P T+MN SGQ+++ M FYK+ ++ LVI DDL+L GT+RL+ G D G NGLK I
Sbjct: 59 VRPTTYMNHSGQAVMAAMQFYKVKR-QDMLVICDDLNLPVGTIRLRAKGSDGGQNGLKHI 117
Query: 119 SEKCGKN-YKRLRIGIGR---PPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
++ G N + RLRIGI + PP + VLG F ER + +++ A ++
Sbjct: 118 IQQMGTNEFSRLRIGIRKGDMPPGS--FSSFVLGKFDEEERKVIDRVVETSADAV 170
>gi|319795631|ref|YP_004157271.1| peptidyL-tRNA hydrolase [Variovorax paradoxus EPS]
gi|315598094|gb|ADU39160.1| peptidyl-tRNA hydrolase [Variovorax paradoxus EPS]
Length = 224
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 94/168 (55%), Gaps = 10/168 (5%)
Query: 6 GLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
GLGNPG EY RHN GF ID R + P ++ +H + + G L++PQ
Sbjct: 21 GLGNPGPEYEATRHNAGFWWIDALARDWKLNLVP--ERGYHGLAARANIGGQSIWLLEPQ 78
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S+ + F+K+ E LV+HD+LD+ G +LK GG AGHNGL+ I +
Sbjct: 79 TFMNLSGKSVAALARFFKIAP-EEILVVHDELDVVPGQAKLKFGGSHAGHNGLRDIHAQL 137
Query: 123 GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +Y RLR+GIG P + ++ VL +R I D I R+L
Sbjct: 138 GTGDYWRLRLGIGHPGVKSEVVNWVLKKPLKEQREL---IDDTIVRTL 182
>gi|227537440|ref|ZP_03967489.1| aminoacyl-tRNA hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242714|gb|EEI92729.1| aminoacyl-tRNA hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 194
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 102/195 (52%), Gaps = 31/195 (15%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI--HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+++ GLGN G EY + RHNIGFM D + + F K HA SE + G +I
Sbjct: 11 YLIVGLGNIGREYEDTRHNIGFMVADELVAQAGGSFSTLK---HAYYSEYKQRGHNVYVI 67
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+++ M K+P + N LVI DDL L FGT+RLK G AGHNGLKSI
Sbjct: 68 KPTTYMNLSGKAVNFWMQQLKVP-IANLLVIVDDLALPFGTIRLKPKGSSAGHNGLKSIE 126
Query: 120 EKC-GKNYKRLRIGI------GRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
C G+ Y RLR GI GR D Y L P ++ + LP L
Sbjct: 127 ALCGGQAYPRLRFGISDNFPKGRQAD-----------------YVLAPFDNDEQKELPAL 169
Query: 173 AKREDVSFLNHIVSV 187
+R V +N +++
Sbjct: 170 IER-SVQMVNSFINI 183
>gi|221068919|ref|ZP_03545024.1| Aminoacyl-tRNA hydrolase [Comamonas testosteroni KF-1]
gi|220713942|gb|EED69310.1| Aminoacyl-tRNA hydrolase [Comamonas testosteroni KF-1]
Length = 212
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 6 GLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
GLGNPG EY + RHN GF ID R P ++ + ++ + G L++PQ
Sbjct: 7 GLGNPGPEYEDTRHNAGFWWIDALARELKVSLVP--ERSYWGLMARTSIHGQTVWLLEPQ 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S+ + F+K+ E LV+HD+LD + G ++LK GG GHNGL+ I +
Sbjct: 65 TFMNLSGKSVGALARFFKI-QPEEILVVHDELDFEPGVVKLKLGGSHGGHNGLRDIHAQL 123
Query: 123 GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G NY RLR+GIG P + VL +P++ L I D IA SL
Sbjct: 124 GSPNYWRLRVGIGHPGHKGEVASWVLKK-PAPDQLKL--IEDAIAHSL 168
>gi|326336040|ref|ZP_08202216.1| aminoacyl-tRNA hydrolase [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691837|gb|EGD33800.1| aminoacyl-tRNA hydrolase [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 188
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 97/169 (57%), Gaps = 3/169 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGN G EY RHNIGF+ ++ + P + +++ G +L+KP
Sbjct: 4 YLIAGLGNIGEEYRYTRHNIGFLAVEHLAQEKEAPFATARL-GDVATFSHKGRTFVLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + K+P +EN LVI DDL+L FG++R+K G D GHNG K+I E+
Sbjct: 63 STFMNLSGKAIKYWLEKEKIP-IENLLVIADDLNLPFGSIRIKKKGSDGGHNGFKNIQEE 121
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
Y RLR GI D I +VLG +S E L ++ I+ ++
Sbjct: 122 LRTTVYARLRFGISANYDKGTQIDYVLGRWSEEEVAQLPERLEKISEAI 170
>gi|188997589|ref|YP_001931840.1| Aminoacyl-tRNA hydrolase [Sulfurihydrogenibium sp. YO3AOP1]
gi|259535276|sp|B2V6V4|PTH_SULSY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|188932656|gb|ACD67286.1| Aminoacyl-tRNA hydrolase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 189
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 92/157 (58%), Gaps = 5/157 (3%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+ GLGNPG +Y RHN+GFM D + S + +++K + I E I+ KPQ
Sbjct: 5 IIGLGNPGEKYKNTRHNVGFMVADLVAKSLNCDRKYREKAFSHIFE--CPDYDVIIAKPQ 62
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG ++L ++ YK+ E LV++DDLDL G +RL+ G GHNG+KSI
Sbjct: 63 TYMNLSGNAVLNILKDYKIKPSE-ILVVYDDLDLPLGAVRLRLKGSSGGHNGIKSIINTI 121
Query: 123 -GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+ + RL+IGIGRP + +VL F+ E++ L
Sbjct: 122 KTEEFPRLKIGIGRPEKKEEVSDYVLSPFTKEEKFLL 158
>gi|188584705|ref|YP_001916250.1| Aminoacyl-tRNA hydrolase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349392|gb|ACB83662.1| Aminoacyl-tRNA hydrolase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 207
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 112/188 (59%), Gaps = 5/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y N+HNIGFM ID H K K + E +L+G + +LIK
Sbjct: 19 MKLIAGLGNPGKKYQYNKHNIGFMVIDYFAKQHGLSVTKLKHQSMWDELRLEGEKIVLIK 78
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-S 119
P T+MN SG ++ +++K+ N ++ L+I+DDLDL+ G LR++ GG GHNGLKSI S
Sbjct: 79 PLTYMNRSGHAIKLWKDYFKIEN-QDLLIIYDDLDLELGDLRMRPKGGTGGHNGLKSIVS 137
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR---E 176
GK + R+R GIGRP +VL +F+ E + ++++ + L K E
Sbjct: 138 TLGGKEFPRIRFGIGRPASQESTSSYVLKDFTKKEFETINNKFPDLSKGIELFCKEGINE 197
Query: 177 DVSFLNHI 184
++F+N +
Sbjct: 198 AMNFVNSL 205
>gi|298244966|ref|ZP_06968772.1| peptidyl-tRNA hydrolase [Ktedonobacter racemifer DSM 44963]
gi|297552447|gb|EFH86312.1| peptidyl-tRNA hydrolase [Ktedonobacter racemifer DSM 44963]
Length = 227
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 100/174 (57%), Gaps = 4/174 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF ID + + W+++ A I+ L+ + +L+K
Sbjct: 1 MKLLVGLGNPGAQYERTRHNVGFRVIDAL-AEKLGVRWERRGRAMIANATLEHEKVVLVK 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E+ ++KL E+ LV++D+LDL G LR++ G GHNG+KS+ +
Sbjct: 60 PITFMNNSGEAVGELQRWFKL-EPEDILVVYDELDLPVGQLRVRARGSAGGHNGMKSLIQ 118
Query: 121 KC-GKNYKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ RLR+GIGRP + I +VLG E LL D + L+
Sbjct: 119 YLHTDQFPRLRVGIGRPANRRLDTINYVLGIPPKDEYITLLQTEDKALEAFSLI 172
>gi|296135225|ref|YP_003642467.1| peptidyl-tRNA hydrolase [Thiomonas intermedia K12]
gi|295795347|gb|ADG30137.1| peptidyl-tRNA hydrolase [Thiomonas intermedia K12]
Length = 206
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 98/178 (55%), Gaps = 7/178 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF---HFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG E+ +RHN GF +D+I + P ++ F +++ +L L+
Sbjct: 4 LLVGLGNPGPEHALDRHNAGFWLVDQIATAAGASLKP--ERGFFGDVARVRLQSHELWLL 61
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+P T+MN SGQS+ FYK+ EN LV HD+LDL G +LK GGG AGHNGL+ +
Sbjct: 62 EPSTYMNRSGQSVGAFARFYKIAP-ENILVAHDELDLPPGQAKLKLGGGHAGHNGLRDLI 120
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G N+ RLR+GIG P D +I VLG E + ++ LP L K E
Sbjct: 121 AHLGTPNFWRLRLGIGHPGDRDAVIGFVLGKPPQSELKLIEQAMEQSRAVLPQLLKGE 178
>gi|226953441|ref|ZP_03823905.1| peptidyl-tRNA hydrolase [Acinetobacter sp. ATCC 27244]
gi|226835824|gb|EEH68207.1| peptidyl-tRNA hydrolase [Acinetobacter sp. ATCC 27244]
Length = 193
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++++ + KFH GQ++G L+ P
Sbjct: 6 LIVGLGNPGKEYAQTRHNAGFWFVEQLADRYGISLKADPKFHGFSGRGQIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS+ FY++ + E+ LV HD+LD+D G +RLK+GGG GHNGL+ I
Sbjct: 66 TTFMNRSGQSVAPFAKFYQI-SPESILVAHDELDMDPGVIRLKSGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVL S E++ + ID+ + LL + +
Sbjct: 125 IGANFHRLRIGIGHPGSKERVSGHVLNKAPSSEQHLMDVAIDHALSKVKLLVDGQVSLAM 184
Query: 182 NHI 184
N I
Sbjct: 185 NQI 187
>gi|149907585|ref|ZP_01896332.1| peptidyl-tRNA hydrolase [Moritella sp. PE36]
gi|149809255|gb|EDM69184.1| peptidyl-tRNA hydrolase [Moritella sp. PE36]
Length = 196
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G I+ + +H ++ K+ + + G L+ P
Sbjct: 7 LIVGLANPGQEYSRTRHNAGAWFINELAKWHNTQLREEAKYFGYTARIDVAGQDVRLLVP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + FY++ ++ LV+HD+LDL G + K GG GHNGLK I K
Sbjct: 67 TTFMNLSGKSVSALAKFYRI-DVTQILVVHDELDLPPGVAKFKQGGSHGGHNGLKDIISK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
K + RLRIGIG P + +VLG + E+ + ID R + +LAK
Sbjct: 126 MANSKEFYRLRIGIGHPGHKDKVTGYVLGKAQAKEQEQMDAAIDEAVRCIDILAK 180
>gi|168050723|ref|XP_001777807.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670783|gb|EDQ57345.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 255
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 91/156 (58%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG ++ RHNIGF ID I P + + + +G + +L KP
Sbjct: 57 WLIVGLGNPGSKFVGTRHNIGFELIDAIAEAENIPLRTIQQRSLLGKGFIGPTPVLLAKP 116
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ + +YK+P E L I+DDL+L+F LR+ GG GHNG++S+ E
Sbjct: 117 HTYMNLSGESVGPISTYYKIPR-ERVLAIYDDLELEFAMLRILPRGGHGGHNGMRSLIEH 175
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G +++ RLR G+GRP +VL F+ ER
Sbjct: 176 FGGKQDFPRLRFGVGRPECNMDPSAYVLQKFNPRER 211
>gi|95930455|ref|ZP_01313191.1| Aminoacyl-tRNA hydrolase [Desulfuromonas acetoxidans DSM 684]
gi|95133495|gb|EAT15158.1| Aminoacyl-tRNA hydrolase [Desulfuromonas acetoxidans DSM 684]
Length = 191
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 99/162 (61%), Gaps = 2/162 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++AGLGNPG Y RHN+GFM +D++ + H KK G+ G + +L++P
Sbjct: 1 MVIAGLGNPGERYAVTRHNVGFMVVDQLAARHQISLKKKGHQGLYGIGRCGGQQVMLLQP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG S+ + + + +VIHD++DL FG +R+K GGG GHNGL+ I +
Sbjct: 61 QTFMNLSGASVASACKSLDVTS-GDLVVIHDEIDLPFGEVRIKQGGGHGGHNGLRHIDQA 119
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
++Y R+R+G+ RPP A + +VL +FS+ E+ L ++
Sbjct: 120 LSTRDYIRVRVGVDRPPAGADVAAYVLKSFSASEKKQLTTVL 161
>gi|145341531|ref|XP_001415860.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576083|gb|ABO94152.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 189
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 97/172 (56%), Gaps = 5/172 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG ++ RHN+GF +D + K A + G+L +L KP
Sbjct: 1 WLICGLGNPGAKFAGTRHNVGFEVVDALARRAGIELTSTKHRAVLGVGKLGRSAVVLAKP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI--- 118
QTFMNLSG+S+ E+M +K+ ++++DDL+ G LR+KT G GHNG++S+
Sbjct: 61 QTFMNLSGKSVREMMRAFKIGK-SRIVIVYDDLETKLGELRMKTSGSHGGHNGVRSVIDD 119
Query: 119 SEKCGKNYKRLRIGIGRPPD-TAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ + +++ R++IGIGRP D + +VL F + + +++ +L
Sbjct: 120 ATRGDRSFARVKIGIGRPKDENTAVYEYVLSRFDEDDAVKVNGAVEDAVEAL 171
>gi|124268411|ref|YP_001022415.1| peptidyl-tRNA hydrolase [Methylibium petroleiphilum PM1]
gi|166199361|sp|A2SKU1|PTH_METPP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|124261186|gb|ABM96180.1| peptidyl-tRNA hydrolase [Methylibium petroleiphilum PM1]
Length = 232
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 96/173 (55%), Gaps = 14/173 (8%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIH-----SFHFFPAWKKKFHAEISEGQLDGLRTI 57
++ GLGNPG EY RHN GF +D + S H ++ +H ++
Sbjct: 4 LMVGLGNPGPEYEATRHNAGFWWVDAVARQLKASLHA----ERAYHGLVARVNTPVGPVW 59
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L++PQT+MN+SG+S+ + F+K+ E LV HD+LDL G ++LK GGG AGHNGL+
Sbjct: 60 LLEPQTYMNVSGKSVAALARFFKIAP-EEILVAHDELDLPPGEMKLKQGGGHAGHNGLRD 118
Query: 118 ISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
I + G +Y RLR+GIG P A + +VLG P R I I RSL
Sbjct: 119 IHAQLGSTDYWRLRLGIGHPGVKAEVANYVLGK---PMREHREAIDACIVRSL 168
>gi|212711985|ref|ZP_03320113.1| hypothetical protein PROVALCAL_03061 [Providencia alcalifaciens DSM
30120]
gi|212685507|gb|EEB45035.1| hypothetical protein PROVALCAL_03061 [Providencia alcalifaciens DSM
30120]
Length = 196
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 93/173 (53%), Gaps = 4/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H ++ KF + + G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLAQRHNQSLKEEPKFFGYTARINIGGNDIRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ V NFY++ N + LV HD+LDL G ++K GG + GHNGLK I K
Sbjct: 66 TTFMNLSGKSVAAVANFYRI-NPDEILVAHDELDLPPGVAKMKLGGSNGGHNGLKDIQSK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
N+ RLRIGIG P D ++ VLG E+ + ID R +L
Sbjct: 125 FANNPNFYRLRIGIGHPGDKNKVVGFVLGKPPLSEQKLIDDAIDESVRCTDIL 177
>gi|242280389|ref|YP_002992518.1| peptidyl-tRNA hydrolase [Desulfovibrio salexigens DSM 2638]
gi|259535156|sp|C6C0N2|PTH_DESAD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|242123283|gb|ACS80979.1| peptidyl-tRNA hydrolase [Desulfovibrio salexigens DSM 2638]
Length = 205
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 91/159 (57%), Gaps = 8/159 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH------FFPAWKKKFHAEISEGQLDGLRT 56
++ GLGNPG EY + RHNIGFM +D + F E+ L G
Sbjct: 6 LIVGLGNPGSEYAKTRHNIGFMAVDALAEVAKSRKSMRFKEMGISGDFELFSLNLAGNNV 65
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+ KP T+MNLSG+++ + Y + + + VIHD+LDL G ++ K GGG+ GH GL+
Sbjct: 66 LATKPLTYMNLSGKAVAAICGKYSIA-VSDVYVIHDELDLPCGRMKFKKGGGNNGHRGLE 124
Query: 117 SISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
SI EK G N+ R+R+GIGRP ++ + +VL F++ E
Sbjct: 125 SIQEKMGSPNFFRIRVGIGRPEFSSQVKDYVLEEFNTQE 163
>gi|239817314|ref|YP_002946224.1| peptidyl-tRNA hydrolase [Variovorax paradoxus S110]
gi|259537455|sp|C5CYZ7|PTH_VARPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|239803891|gb|ACS20958.1| peptidyl-tRNA hydrolase [Variovorax paradoxus S110]
Length = 210
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 94/168 (55%), Gaps = 10/168 (5%)
Query: 6 GLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
GLGNPG EY RHN GF ID R + P ++ +H + + G L++PQ
Sbjct: 7 GLGNPGPEYEATRHNAGFWWIDALARDWKLNLVP--ERSYHGLAARTNIGGQSVWLLEPQ 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S+ + F+K+ E LV+HD+LD+ G +LK GG AGHNGL+ I +
Sbjct: 65 TFMNLSGKSVGALARFFKIAP-EEILVVHDELDVVPGQAKLKFGGSHAGHNGLRDIHAQL 123
Query: 123 GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +Y RLR+GIG P + +I VL P + I D I R+L
Sbjct: 124 GTGDYWRLRLGIGHPGVKSEVINWVL---KKPLKEQREAIEDAIVRTL 168
>gi|258404968|ref|YP_003197710.1| peptidyl-tRNA hydrolase [Desulfohalobium retbaense DSM 5692]
gi|257797195|gb|ACV68132.1| peptidyl-tRNA hydrolase [Desulfohalobium retbaense DSM 5692]
Length = 197
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDG--LRTIL 58
++ GLGNPG +Y RHN GF+ +D + P + + ++ G L L
Sbjct: 8 LIVGLGNPGPQYARTRHNCGFLVLDALRRHTPSPCREVVLPVRGRVWRWEVPGSVLPWGL 67
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+ P T+MN SG+++ E+ L E +V+HD+LDL FGTLRLK GGG AGH GL+SI
Sbjct: 68 LTPLTYMNRSGEAVAELCQTMGL-GPEQLVVVHDELDLPFGTLRLKQGGGLAGHRGLQSI 126
Query: 119 SEKC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+ C + + RLR+GIGRP + ++ HVL FS E+ L + + + +L R
Sbjct: 127 A-NCLQSREFTRLRVGIGRPTEGVGVVDHVLSPFSLEEQAHLEELCERGSSALQAYCTR 184
>gi|320354571|ref|YP_004195910.1| peptidyl-tRNA hydrolase [Desulfobulbus propionicus DSM 2032]
gi|320123073|gb|ADW18619.1| peptidyl-tRNA hydrolase [Desulfobulbus propionicus DSM 2032]
Length = 196
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 85/136 (62%), Gaps = 2/136 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG EY +RHNIGF +D + +K G+ G + +KP
Sbjct: 6 FLLVGLGNPGREYHLSRHNIGFFFLDHLAGLQGLLIETQKMQGLYCHGRAHGHQLYFLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+S+ ++++K+P L N L++HDD+DL G ++L GG GHNG++S+++
Sbjct: 66 QTYMNRSGESVRSFVDYFKIP-LCNLLILHDDIDLSAGRIKLVAKGGAGGHNGVRSVAQH 124
Query: 122 CGKN-YKRLRIGIGRP 136
G + RL+IG+GRP
Sbjct: 125 LGTTEFARLKIGVGRP 140
>gi|227512316|ref|ZP_03942365.1| peptidyl-tRNA hydrolase [Lactobacillus buchneri ATCC 11577]
gi|227084491|gb|EEI19803.1| peptidyl-tRNA hydrolase [Lactobacillus buchneri ATCC 11577]
Length = 189
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 99/170 (58%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN GFM ++ H +K +A++ ++G + ++++
Sbjct: 4 MKMIVGLGNIGPQYDGTRHNTGFMVVEEFAKKHGISIKIRKMNAKMGSAFVNGQKVLVVE 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +M+++++ N ++ +V+HDD+DL G +R+K G GHNG+KS+
Sbjct: 64 PTTFMNDSGIAVKPLMSYFEIEN-KDVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSLIN 122
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +++ R+R+GI P ++ +VLG FS + DN +L
Sbjct: 123 NLGTEHFSRIRVGIAHPDKNNTVVNYVLGRFSKSQLPEFKIATDNAVNAL 172
>gi|150006313|ref|YP_001301057.1| peptidyl-tRNA hydrolase [Bacteroides vulgatus ATCC 8482]
gi|254885160|ref|ZP_05257870.1| peptidyl-tRNA hydrolase [Bacteroides sp. 4_3_47FAA]
gi|294776298|ref|ZP_06741782.1| aminoacyl-tRNA hydrolase [Bacteroides vulgatus PC510]
gi|319641347|ref|ZP_07996042.1| peptidyl-tRNA hydrolase [Bacteroides sp. 3_1_40A]
gi|166199306|sp|A6L6X1|PTH_BACV8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|149934737|gb|ABR41435.1| peptidyl-tRNA hydrolase [Bacteroides vulgatus ATCC 8482]
gi|254837953|gb|EET18262.1| peptidyl-tRNA hydrolase [Bacteroides sp. 4_3_47FAA]
gi|294449885|gb|EFG18401.1| aminoacyl-tRNA hydrolase [Bacteroides vulgatus PC510]
gi|317387028|gb|EFV67912.1| peptidyl-tRNA hydrolase [Bacteroides sp. 3_1_40A]
Length = 187
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF +D + ++ A + L G + IL+KP
Sbjct: 3 YLITGLGNIGEEYRNTRHNIGFTVLDALAKASNLVFTDGRYGATATL-SLKGRQLILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STYMNLSGNAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G ++Y RLR GIG I VLG+F+ +
Sbjct: 121 LGTQDYARLRFGIGNDFPRGGQIDFVLGHFTDED 154
>gi|148238651|ref|YP_001224038.1| peptidyl-tRNA hydrolase [Synechococcus sp. WH 7803]
gi|147847190|emb|CAK22741.1| Peptidyl-tRNA hydrolase [Synechococcus sp. WH 7803]
Length = 209
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG Y RHN+GFM ++++ + H K ++++ R L+ P
Sbjct: 9 LVVGLGNPGDRYASTRHNVGFMALEQLAARDHARFRAMAKLQGDLADVGAGSDRLRLLMP 68
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S+ ++++ L NL +V+ DD+DL G LRL+ G GHNGLKS +
Sbjct: 69 NTYMNESGRSIRATLDWFGL-NLGQVIVLVDDMDLPLGRLRLRARGSAGGHNGLKSTIQH 127
Query: 122 CG-KNYKRLRIGIGRPPDT-----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G + + RLRIGIG P + A + HVLG FS E L +++ + L + ++
Sbjct: 128 LGTQEFARLRIGIGAPGRSPEERRARTVSHVLGAFSREEEPLLKEVLNEVLAGLERIQRQ 187
Query: 176 EDVSFLNHI 184
NHI
Sbjct: 188 GLERAGNHI 196
>gi|119484739|ref|ZP_01619221.1| peptidyl-tRNA hydrolase [Lyngbya sp. PCC 8106]
gi|119457557|gb|EAW38681.1| peptidyl-tRNA hydrolase [Lyngbya sp. PCC 8106]
Length = 210
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 105/181 (58%), Gaps = 9/181 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTI-LIK 60
++ GLGNP +Y RHNIGF ID + ++ + +KF EG G I L+K
Sbjct: 15 LIVGLGNPESKYDRTRHNIGFAAIDILAENWQISLSENRKFQGRFGEGISRGRDQIRLLK 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MN SGQ++ V+N+YK+P E+ LVI+DD+DL G LRL+ G GHNG+KS IS
Sbjct: 75 PLTYMNRSGQAIQAVVNWYKIPP-ESVLVIYDDMDLPLGRLRLRLSGSAGGHNGMKSTIS 133
Query: 120 EKCGKNYKRLRIGIGRPPD-----TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+N+ RLRIGI +P D T I HVLG FS E + ++ + ++ L K
Sbjct: 134 HLGTQNFPRLRIGIDKPKDPASSQTGETISHVLGKFSPSETQAMDKVLKLVVEAVELSLK 193
Query: 175 R 175
+
Sbjct: 194 Q 194
>gi|300313474|ref|YP_003777566.1| peptidyl-tRNA hydrolase [Herbaspirillum seropedicae SmR1]
gi|300076259|gb|ADJ65658.1| peptidyl-tRNA hydrolase protein [Herbaspirillum seropedicae SmR1]
Length = 192
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 85/135 (62%), Gaps = 3/135 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG EY + RHN GF +D + A +++F+A + + G L++PQ
Sbjct: 5 LIVGLGNPGPEYEQTRHNAGFWLVDNLAGPVRL-AREQRFNALAGKTSIAGSEVWLLEPQ 63
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SGQS+ + FYK+ N + LV+HD+LDL G ++K GG GHNGLK I+
Sbjct: 64 TYMNRSGQSVGALARFYKI-NPDEVLVVHDELDLPPGAAKIKKGGSSGGHNGLKDITAAL 122
Query: 123 G-KNYKRLRIGIGRP 136
G ++Y RLR+GIG P
Sbjct: 123 GTQDYWRLRLGIGHP 137
>gi|293609065|ref|ZP_06691368.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829638|gb|EFF88000.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325121161|gb|ADY80684.1| peptidyl-tRNA hydrolase [Acinetobacter calcoaceticus PHEA-2]
Length = 193
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF I+++ + KFH G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFIEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS++ FY++ E L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 TTFMNRSGQSVVPFAKFYQIAP-EAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG S E+ + ID+ + LL + + +
Sbjct: 125 IGPNFHRLRIGIGHPGSKEKVSGHVLGKAPSSEQSLMDAAIDHALSKVKLLVQGQVPQAM 184
Query: 182 NHI 184
N I
Sbjct: 185 NQI 187
>gi|227487498|ref|ZP_03917814.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227541226|ref|ZP_03971275.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51866]
gi|227092480|gb|EEI27792.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227182999|gb|EEI63971.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51866]
Length = 168
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 87/149 (58%), Gaps = 23/149 (15%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG EY E RHN+GF +D + + KF KP
Sbjct: 12 WLVVGLGNPGPEYAETRHNVGFRVVDALAARAGV-----KF----------------CKP 50
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+++ + YK+P E +V+HD+LDL G ++++ GG + GHNGLKS+SE
Sbjct: 51 QTYMNRSGEAVAPLARRYKVPP-ERIIVVHDELDLPEGRIKVRLGGNENGHNGLKSVSEC 109
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGN 149
G ++Y R+R+GIGRPP + VLG
Sbjct: 110 LGTRDYIRVRVGIGRPPAGTGVADWVLGT 138
>gi|256751656|ref|ZP_05492531.1| Aminoacyl-tRNA hydrolase [Thermoanaerobacter ethanolicus CCSD1]
gi|256749465|gb|EEU62494.1| Aminoacyl-tRNA hydrolase [Thermoanaerobacter ethanolicus CCSD1]
Length = 113
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG EY RHN+GFM ID + K KF + + +G G + IL+K
Sbjct: 1 MYVIAGLGNPGREYEGTRHNVGFMVIDELAKKLGMNVTKLKFKSLVGDGNFKGEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLK 104
PQTFMN SG++L + +NFYK+P LEN +VI+DD DLD G +R++
Sbjct: 61 PQTFMNSSGEALYDAVNFYKIP-LENVIVIYDDKDLDVGKIRIR 103
>gi|134096055|ref|YP_001101130.1| peptidyl-tRNA hydrolase [Herminiimonas arsenicoxydans]
gi|133739958|emb|CAL63009.1| peptidyl-tRNA hydrolase (PTH) [Herminiimonas arsenicoxydans]
Length = 196
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 102/175 (58%), Gaps = 8/175 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIH--SFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D + + + + K+ A ++ + G L++
Sbjct: 5 LIVGLGNPGQEYEQTRHNAGFWLVDELARATPRCTLSRESKYSALAAKTAIAGQEVWLLE 64
Query: 61 PQTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
PQTFMN SGQS+ + FYK LP+ LV HD+LDL G +LK GG GHNGLK I+
Sbjct: 65 PQTFMNRSGQSVGALARFYKILPD--EILVAHDELDLPPGIAKLKKGGSSGGHNGLKDIT 122
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN-IARSLPLL 172
G ++Y RLRIGIG P T ++ + V+ R P+ID IA+SL ++
Sbjct: 123 AALGTQDYWRLRIGIGH-PRTLNLNQAVVDFVLHRPRKEEQPLIDEAIAKSLSII 176
>gi|260219881|emb|CBA26856.1| Peptidyl-tRNA hydrolase [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 227
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 100/182 (54%), Gaps = 4/182 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG EY RHN GF +D + A + +H ++ + G L++P
Sbjct: 4 LFVGLGNPGPEYDGTRHNAGFWWVDALARELKVNLAMDRGYHGLLARTSIKGETVWLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ + F+K+ E LV HD+LD+ G +LK GG AGHNGL+ I +
Sbjct: 64 QTFMNLSGKSVGALARFFKI-KPEEILVAHDELDVVPGEAKLKFGGSHAGHNGLRDIHAQ 122
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDVS 179
G +Y RLR+G+G P + ++ VL S R + ID ++LP LLA D +
Sbjct: 123 LGTGDYWRLRLGVGHPGVKSEVVHWVLKKPSLDHRIAIDQSIDRSLKALPHLLASEMDKA 182
Query: 180 FL 181
+
Sbjct: 183 TM 184
>gi|187477048|ref|YP_785072.1| peptidyl-tRNA hydrolase [Bordetella avium 197N]
gi|119390914|sp|Q2KY99|PTH_BORA1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|115421634|emb|CAJ48144.1| peptidyl-tRNA hydrolase [Bordetella avium 197N]
Length = 207
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 84/136 (61%), Gaps = 3/136 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GF DR+ A +K F +++ + +G +L+KP
Sbjct: 19 LIVGLGNPGPDYETTRHNAGFWLADRLADDLRATFALEKGFMGMVAKARFEGENVLLLKP 78
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FYKL E LV+HD+LDL G +++K GGG AGHNGLK I
Sbjct: 79 ITYMNRSGQAVGALARFYKLAP-EQVLVLHDELDLLPGQVKMKQGGGHAGHNGLKDIQAA 137
Query: 122 CGK-NYKRLRIGIGRP 136
G N+ RLR+GIG P
Sbjct: 138 LGTPNFWRLRLGIGHP 153
>gi|255311636|ref|ZP_05354206.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis 6276]
gi|255317937|ref|ZP_05359183.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis 6276s]
Length = 179
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 108/177 (61%), Gaps = 8/177 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
+V G+GNPG +Y RHNIGF+ +D + S HF A+++ + +A ++ ++ +L+K
Sbjct: 4 LVVGIGNPGRQYVWTRHNIGFLLLDSLAS-HFLGAFREAPRLYASFAKVEISSEAVVLMK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T++NL+G+++L F+ + ++E+ LV+ DD++ +FG +R + G GHNG+K+ ++
Sbjct: 63 PTTYVNLTGKAVLAAKKFFDV-SMEDILVVADDINREFGFVRFRQDCGSGGHNGIKNTTQ 121
Query: 121 KCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIIDN-IARSLPLLA 173
N Y +LR+G+GRP P + +VL +FS E+ L ++ I LP L
Sbjct: 122 ILQSNHYWQLRLGVGRPSYPGAEGVADYVLSSFSLNEKEKLNDFLEKGIEEILPWLG 178
>gi|227824247|ref|ZP_03989079.1| peptidyl-tRNA hydrolase [Acidaminococcus sp. D21]
gi|226904746|gb|EEH90664.1| peptidyl-tRNA hydrolase [Acidaminococcus sp. D21]
Length = 206
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 5/184 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V LGN G EY RHNIGFM D + + W+K A E ++ + +LIKP
Sbjct: 12 LVVALGNIGPEYAMTRHNIGFMTADILARRWGMEGDWRKAERAFYLEKRVPE-KVLLIKP 70
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ + FY L E+ LVI DD+DL G+LR++ G GHNGLKSI +
Sbjct: 71 TTYMNLSGDAVRDFAGFYHL-QPEDVLVIQDDMDLPVGSLRIRKQGTSGGHNGLKSIEKA 129
Query: 122 CG-KNYKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++Y R+++GIG P ++ HVL F +R + I++ A ++ K ++
Sbjct: 130 LGSEHYPRIKVGIGHPLRVQEAVVSHVLHRFEGTDRETIAQILEKAADAVEDWMKGASIN 189
Query: 180 FLNH 183
L+
Sbjct: 190 ELSQ 193
>gi|189095922|pdb|2JRC|A Chain A, Solution Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis H37rv
Length = 204
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 104/174 (59%), Gaps = 5/174 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF--HFFPAWKKKFHAEISEGQLDGLRTILI 59
+V GLGNPG Y RHN+GF+ D + + F A K+ AE++ G+ G +L
Sbjct: 5 LLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRS-GAEVATGRSAGRSLVLA 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+ +MN SG+ + + FY + N +VIHDDLDL+FG +RLK GGG+ GHNGL+S+
Sbjct: 64 KPRCYMNESGRQIGPLAKFYSVAP-ANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVV 122
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K+++R+RIGIGRPP VL NF+ ER + I + A + LL
Sbjct: 123 AALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELL 176
>gi|311746127|ref|ZP_07719912.1| aminoacyl-tRNA hydrolase [Algoriphagus sp. PR1]
gi|126576348|gb|EAZ80626.1| aminoacyl-tRNA hydrolase [Algoriphagus sp. PR1]
Length = 186
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 94/164 (57%), Gaps = 3/164 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF+ +DR+ WK A +E + G LIKP
Sbjct: 3 YLLVGLGNIGPEYELTRHNIGFLTVDRLAEKENL-TWKSDRLAFKTEYKFKGRSIHLIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
T+MNLSG+++ M ++P EN L+I D++ L FG LR+K G AGHNGLK+I
Sbjct: 62 TTYMNLSGKAVNYWMKELQIPK-ENILIIVDEVALPFGKLRMKPKGSAAGHNGLKNIEAL 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G+NY RLR+GIG + +VLG F+ E L I+D
Sbjct: 121 TGGQNYPRLRMGIGDDFPKGRQVDYVLGKFTQEEFDQLPEIMDQ 164
>gi|90962333|ref|YP_536249.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius UCC118]
gi|119390953|sp|Q1WSG3|PTH_LACS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|90821527|gb|ABE00166.1| Peptidyl-tRNA hydrolase [Lactobacillus salivarius UCC118]
Length = 185
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 108/184 (58%), Gaps = 7/184 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN +Y RHN+GFM ++R H K+KF + ISE ++G + I+IK
Sbjct: 1 MKMIVGLGNIEKKYEGTRHNVGFMVVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M+++ L E+ ++ HDD+DL+ G LRL+ G GHNG+KSI
Sbjct: 61 PTTYMNESGRAVRPLMDYFNLTT-EDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + +KR+R+GI P + ++ VL F+ + + D + R++ L E+
Sbjct: 120 HVGTEKFKRVRVGIDHPQKMS-VVDWVLSRFTKEQE---AKLDDGLTRAVAALDDWIEND 175
Query: 179 SFLN 182
F+N
Sbjct: 176 DFMN 179
>gi|259507031|ref|ZP_05749931.1| peptidyl-tRNA hydrolase 2 (PTH 2) [Corynebacterium efficiens
YS-314]
gi|259165309|gb|EEW49863.1| peptidyl-tRNA hydrolase 2 (PTH 2) [Corynebacterium efficiens
YS-314]
Length = 220
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 9/186 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL-DGLRTIL-I 59
++V GLGNPG +Y RHN+G+MC+D + H P ++ L D + L +
Sbjct: 38 WLVVGLGNPGVKYEATRHNVGYMCVDTLLGTHDAPPLTPVRGLKVLTTPLPDAADSALAV 97
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+ TFMN SGQ + + +P E +VIHD+LDL G +R+K GG + GHNGLKS++
Sbjct: 98 RSTTFMNHSGQGVAPLAQTLGIPP-ERIIVIHDELDLPAGKVRVKKGGNENGHNGLKSLT 156
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
++ G ++Y R+RIGI RPP + +VL + + P ID A ++ L+ R
Sbjct: 157 QELGTRDYLRVRIGISRPPQGMSVPDYVLEPVADQQ-----PGIDVAADAVDLIIARGLA 211
Query: 179 SFLNHI 184
+ N I
Sbjct: 212 AAQNDI 217
>gi|152980211|ref|YP_001354820.1| peptidyl-tRNA hydrolase [Janthinobacterium sp. Marseille]
gi|151280288|gb|ABR88698.1| peptidyl-tRNA hydrolase [Janthinobacterium sp. Marseille]
Length = 195
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 104/177 (58%), Gaps = 12/177 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP----AWKKKFHAEISEGQLDGLRTIL 58
++ GLGNPG EY + RHN GF +D++ P + + K++A ++ + G L
Sbjct: 5 LIVGLGNPGQEYEQTRHNAGFWLVDQL--ARNMPRCNLSRESKYNALAAKTVIAGQEVWL 62
Query: 59 IKPQTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
++PQTFMN SGQS+ + FYK LP+ LV HD+LDL G +LK GG GHNGLK
Sbjct: 63 LEPQTFMNRSGQSVGALARFYKILPD--EVLVAHDELDLPPGVAKLKKGGSSGGHNGLKD 120
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN-IARSLPLL 172
I+ G ++Y RLRIGIG P T ++ + V+ R P+ID IA+SL ++
Sbjct: 121 ITAALGTQDYWRLRIGIGH-PRTLNLQQAVVDFVLHRPRKEEQPLIDEAIAKSLDVI 176
>gi|223983658|ref|ZP_03633834.1| hypothetical protein HOLDEFILI_01115 [Holdemania filiformis DSM
12042]
gi|223964355|gb|EEF68691.1| hypothetical protein HOLDEFILI_01115 [Holdemania filiformis DSM
12042]
Length = 187
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 99/178 (55%), Gaps = 23/178 (12%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF +DR+ + KF+A I+ + +L+K
Sbjct: 1 MKLIVGLGNPGREYEHTRHNAGFDVLDRLADLLNTGISQSKFNALITTVRTGQETILLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++++ + FYK+P ++ LVIHDDLDL G +R++T G G G+K+I +
Sbjct: 61 PQTYMNNSGEAVIQAVQFYKIP-VDQILVIHDDLDLPVGKIRIRTSGSAGGQKGMKNIID 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
++ R+R+GI + P L+PI+D + +P +RED
Sbjct: 120 HLHTQDIARIRVGIDKNP--------------------LIPIVDYVLGKVP-ADQRED 156
>gi|300770849|ref|ZP_07080726.1| aminoacyl-tRNA hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762122|gb|EFK58941.1| aminoacyl-tRNA hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 186
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI--HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+++ GLGN G EY + RHNIGFM D + + F K ++AE + G +I
Sbjct: 3 YLIVGLGNIGREYQDTRHNIGFMVADELVAQAGGSFSTLKHAYYAEYKQ---RGHNVYVI 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+++ M K+P + N LVI DDL L FGT+RLK G AGHNGLKSI
Sbjct: 60 KPTTYMNLSGKAVNFWMQQLKVP-IANLLVIVDDLALPFGTIRLKPKGSSAGHNGLKSIE 118
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
C G+ Y RLR GI +VL F + E+ L +I+
Sbjct: 119 ALCGGQAYPRLRFGISDNFPKGRQADYVLAPFDNDEQKELPALIE 163
>gi|189500048|ref|YP_001959518.1| peptidyl-tRNA hydrolase [Chlorobium phaeobacteroides BS1]
gi|238692300|sp|B3EQK4|PTH_CHLPB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189495489|gb|ACE04037.1| Aminoacyl-tRNA hydrolase [Chlorobium phaeobacteroides BS1]
Length = 189
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 96/172 (55%), Gaps = 8/172 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSF--HFFPAWKKKFH-AEISEGQLDGLRTI 57
M ++ GLGNP + RHNIGF ID + K FH A+I+ G I
Sbjct: 1 MKLIVGLGNPEKRHENTRHNIGFEVIDEMARLFQTGMTTGKGNFHHAKITH---RGKGVI 57
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
++KP T+MNLSG +++ MNFYK+P +E LVI DDL++ G++RL+ G G NGLK
Sbjct: 58 VLKPMTYMNLSGHAVVAAMNFYKIP-VEEILVICDDLNIPLGSIRLRAKGSAGGQNGLKH 116
Query: 118 ISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
I + G+ ++ RLR+GIGR + VLG FS ER II A +
Sbjct: 117 IIQCLGREDFARLRVGIGRDHPSGSYSSFVLGKFSEEERKTADSIIPECAEA 168
>gi|227504130|ref|ZP_03934179.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
gi|227199262|gb|EEI79310.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
Length = 198
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 93/154 (60%), Gaps = 5/154 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT--ILI 59
++V GLGNPG +Y RHN+G+M +D + + H+ ++ L+ T +++
Sbjct: 13 WLVVGLGNPGAKYAATRHNVGYMAVDDLLAESGELLQPVAGHS-LTAAPLNVADTPVLVV 71
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+ TFMNLSG + + +P E LVIHD+LDL +R+K GG + GHNGLKS++
Sbjct: 72 RSATFMNLSGDPIAPLAQQLGIP-AERVLVIHDELDLPPNKIRIKVGGNENGHNGLKSLT 130
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSS 152
E+ G ++Y R+RIGIGRPP + I +VLG +
Sbjct: 131 ERLGTRDYPRVRIGIGRPPKGSSIPDYVLGPIDA 164
>gi|163858318|ref|YP_001632616.1| peptidyl-tRNA hydrolase [Bordetella petrii DSM 12804]
gi|229620373|sp|A9I6W1|PTH_BORPD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|163262046|emb|CAP44348.1| pth [Bordetella petrii]
Length = 210
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 83/136 (61%), Gaps = 3/136 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++AGLGNPG +Y RHN GF D + A +K F +++ + G +L+KP
Sbjct: 19 LIAGLGNPGPDYETTRHNAGFWLADHLADDLRATFALEKSFFGMVAKARHAGENVLLVKP 78
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FYKL E LV+HD+LDL G ++LK GGG AGHNGLK I
Sbjct: 79 ITYMNRSGQAVGALARFYKLAP-EQVLVLHDELDLLPGQVKLKQGGGHAGHNGLKDIQAA 137
Query: 122 CGK-NYKRLRIGIGRP 136
G N+ RLRIGIG P
Sbjct: 138 LGSPNFWRLRIGIGHP 153
>gi|15608154|ref|NP_215530.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Rv]
gi|15840442|ref|NP_335479.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CDC1551]
gi|31792205|ref|NP_854698.1| peptidyl-tRNA hydrolase [Mycobacterium bovis AF2122/97]
gi|121636943|ref|YP_977166.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660796|ref|YP_001282319.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Ra]
gi|148822223|ref|YP_001286977.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis F11]
gi|167968127|ref|ZP_02550404.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Ra]
gi|215402829|ref|ZP_03415010.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 02_1987]
gi|215410616|ref|ZP_03419424.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 94_M4241A]
gi|215426292|ref|ZP_03424211.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T92]
gi|215429875|ref|ZP_03427794.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis EAS054]
gi|215445163|ref|ZP_03431915.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T85]
gi|218752685|ref|ZP_03531481.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis GM 1503]
gi|219556882|ref|ZP_03535958.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T17]
gi|224989415|ref|YP_002644102.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253799956|ref|YP_003032957.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 1435]
gi|254231308|ref|ZP_04924635.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis C]
gi|254363930|ref|ZP_04979976.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis str.
Haarlem]
gi|254549999|ref|ZP_05140446.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260185925|ref|ZP_05763399.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CPHL_A]
gi|260200043|ref|ZP_05767534.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T46]
gi|260204232|ref|ZP_05771723.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis K85]
gi|289442435|ref|ZP_06432179.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T46]
gi|289446595|ref|ZP_06436339.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CPHL_A]
gi|289555203|ref|ZP_06444413.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 605]
gi|289568992|ref|ZP_06449219.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T17]
gi|289573654|ref|ZP_06453881.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis K85]
gi|289744750|ref|ZP_06504128.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 02_1987]
gi|289749544|ref|ZP_06508922.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T92]
gi|289753075|ref|ZP_06512453.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis EAS054]
gi|289757096|ref|ZP_06516474.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T85]
gi|289761150|ref|ZP_06520528.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis GM 1503]
gi|294995203|ref|ZP_06800894.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 210]
gi|297633540|ref|ZP_06951320.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN 4207]
gi|297730525|ref|ZP_06959643.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN R506]
gi|298524510|ref|ZP_07011919.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 94_M4241A]
gi|306775149|ref|ZP_07413486.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu001]
gi|306781936|ref|ZP_07420273.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu002]
gi|306783709|ref|ZP_07422031.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu003]
gi|306788064|ref|ZP_07426386.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu004]
gi|306792397|ref|ZP_07430699.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu005]
gi|306796800|ref|ZP_07435102.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu006]
gi|306802686|ref|ZP_07439354.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu008]
gi|306806865|ref|ZP_07443533.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu007]
gi|306967066|ref|ZP_07479727.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu009]
gi|306971256|ref|ZP_07483917.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu010]
gi|307083545|ref|ZP_07492658.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu012]
gi|313657854|ref|ZP_07814734.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN V2475]
gi|54038905|sp|P65866|PTH_MYCBO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54041591|sp|P65865|PTH_MYCTU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229421|sp|A1KHF2|PTH_MYCBP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229425|sp|A5U157|PTH_MYCTA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783880|sp|C1AM05|PTH_MYCBT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157836744|pdb|2Z2I|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis
gi|157836745|pdb|2Z2J|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis
gi|157836746|pdb|2Z2J|B Chain B, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis
gi|157836747|pdb|2Z2K|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis
gi|1870014|emb|CAB06865.1| PROBABLE PEPTIDYL-TRNA HYDROLASE PTH [Mycobacterium tuberculosis
H37Rv]
gi|13880613|gb|AAK45293.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CDC1551]
gi|31617793|emb|CAD93902.1| PROBABLE PEPTIDYL-TRNA HYDROLASE PTH [Mycobacterium bovis
AF2122/97]
gi|121492590|emb|CAL71058.1| Probable peptidyl-trna hydrolase pth [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124600367|gb|EAY59377.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis C]
gi|134149444|gb|EBA41489.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis str.
Haarlem]
gi|148504948|gb|ABQ72757.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Ra]
gi|148720750|gb|ABR05375.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis F11]
gi|224772528|dbj|BAH25334.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253321459|gb|ACT26062.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 1435]
gi|289415354|gb|EFD12594.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T46]
gi|289419553|gb|EFD16754.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CPHL_A]
gi|289439835|gb|EFD22328.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 605]
gi|289538085|gb|EFD42663.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis K85]
gi|289542746|gb|EFD46394.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T17]
gi|289685278|gb|EFD52766.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 02_1987]
gi|289690131|gb|EFD57560.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T92]
gi|289693662|gb|EFD61091.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis EAS054]
gi|289708656|gb|EFD72672.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis GM 1503]
gi|289712660|gb|EFD76672.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T85]
gi|298494304|gb|EFI29598.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 94_M4241A]
gi|308216299|gb|EFO75698.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu001]
gi|308325327|gb|EFP14178.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu002]
gi|308331492|gb|EFP20343.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu003]
gi|308335298|gb|EFP24149.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu004]
gi|308339106|gb|EFP27957.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu005]
gi|308342778|gb|EFP31629.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu006]
gi|308346687|gb|EFP35538.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu007]
gi|308350602|gb|EFP39453.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu008]
gi|308355235|gb|EFP44086.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu009]
gi|308359190|gb|EFP48041.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu010]
gi|308366756|gb|EFP55607.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu012]
gi|323720514|gb|EGB29596.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CDC1551A]
gi|326904759|gb|EGE51692.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis W-148]
gi|328459699|gb|AEB05122.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 4207]
Length = 191
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 104/174 (59%), Gaps = 5/174 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF--HFFPAWKKKFHAEISEGQLDGLRTILI 59
+V GLGNPG Y RHN+GF+ D + + F A K+ AE++ G+ G +L
Sbjct: 5 LLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRS-GAEVATGRSAGRSLVLA 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+ +MN SG+ + + FY + N +VIHDDLDL+FG +RLK GGG+ GHNGL+S+
Sbjct: 64 KPRCYMNESGRQIGPLAKFYSVAP-ANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVV 122
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K+++R+RIGIGRPP VL NF+ ER + I + A + LL
Sbjct: 123 AALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELL 176
>gi|25027562|ref|NP_737616.1| peptidyl-tRNA hydrolase [Corynebacterium efficiens YS-314]
gi|23492844|dbj|BAC17816.1| putative peptidyl-tRNA hydrolase [Corynebacterium efficiens YS-314]
Length = 231
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 9/186 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL-DGLRTIL-I 59
++V GLGNPG +Y RHN+G+MC+D + H P ++ L D + L +
Sbjct: 49 WLVVGLGNPGVKYEATRHNVGYMCVDTLLGTHDAPPLTPVRGLKVLTTPLPDAADSALAV 108
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+ TFMN SGQ + + +P E +VIHD+LDL G +R+K GG + GHNGLKS++
Sbjct: 109 RSTTFMNHSGQGVAPLAQTLGIPP-ERIIVIHDELDLPAGKVRVKKGGNENGHNGLKSLT 167
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
++ G ++Y R+RIGI RPP + +VL + + P ID A ++ L+ R
Sbjct: 168 QELGTRDYLRVRIGISRPPQGMSVPDYVLEPVADQQ-----PGIDVAADAVDLIIARGLA 222
Query: 179 SFLNHI 184
+ N I
Sbjct: 223 AAQNDI 228
>gi|299531511|ref|ZP_07044917.1| peptidyl-tRNA hydrolase [Comamonas testosteroni S44]
gi|298720474|gb|EFI61425.1| peptidyl-tRNA hydrolase [Comamonas testosteroni S44]
Length = 212
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 97/171 (56%), Gaps = 10/171 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+ GLGNPG EY + RHN GF ID R + P ++ + ++ + G L+
Sbjct: 4 LFVGLGNPGPEYEDTRHNAGFWWIDALARELKVNLVP--ERSYWGLMARTSIHGQSIWLL 61
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+PQTFMNLSG+S+ + F+K+ E LV+HD+LD + G ++LK GG GHNGL+ I
Sbjct: 62 EPQTFMNLSGKSVGTLARFFKI-QPEEILVVHDELDFEPGVVKLKLGGSHGGHNGLRDIH 120
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ G NY RLR+GIG P + VL +P++ L I D IA SL
Sbjct: 121 AQLGSPNYWRLRVGIGHPGHKGEVASWVLKK-PAPDQLKL--IEDAIAHSL 168
>gi|29840576|ref|NP_829682.1| peptidyl-tRNA hydrolase [Chlamydophila caviae GPIC]
gi|33301429|sp|Q821W6|PTH_CHLCV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|29834926|gb|AAP05560.1| peptidyl-tRNA hydrolase [Chlamydophila caviae GPIC]
Length = 183
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 99/161 (61%), Gaps = 10/161 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK----KKFHAEISEGQLDGLRT 56
M IVA +GNPG +Y RHNIGF+C D++ FP + +K ++I++ +
Sbjct: 3 MLIVA-IGNPGRQYTWTRHNIGFLCADKL--LQGFPEAQFKEARKLFSDIAKVESPQGSM 59
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+ IKP+T++NLSG+++ V +Y +P ++ LV+ DD++ FG +RL+ G GH G+K
Sbjct: 60 VFIKPRTYVNLSGKAVSAVKEYYGIP-IDRILVLADDVNHPFGNVRLRQNAGGGGHKGIK 118
Query: 117 SISEKCGKN-YKRLRIGIGRPP-DTAHIIRHVLGNFSSPER 155
SI++ G N Y +LR+GIGRP + + VLG F+ E+
Sbjct: 119 SITQSLGSNDYWQLRLGIGRPQREDIELSDFVLGQFTEEEQ 159
>gi|51894373|ref|YP_077064.1| peptidyl-tRNA hydrolase [Symbiobacterium thermophilum IAM 14863]
gi|68052923|sp|Q67JD0|PTH_SYMTH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|51858062|dbj|BAD42220.1| Stage V sporulation protein C, peptidyl-tRNA hydrolase
[Symbiobacterium thermophilum IAM 14863]
Length = 189
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 88/153 (57%), Gaps = 6/153 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKF---HAEISEGQLDGLRTILI 59
++ GLGNPG Y RHN G+M +D H ++ F + E+ G + + IL+
Sbjct: 4 LIVGLGNPGPRYAATRHNAGWMLLDAFARKHGVAIEQRGFEGLYGELRWGA-EAEKVILL 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S+ + FY++ + LV+ DDLDL+ G LRL+ G GHNG+KS+
Sbjct: 63 KPLTYMNLSGRSVAQAARFYRIAP-ADILVLFDDLDLEPGRLRLRAKGSAGGHNGVKSVI 121
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFS 151
+ G + RLRIGIGRP +I VL F
Sbjct: 122 AELGTAEFPRLRIGIGRPAPGWEVIDWVLAPFG 154
>gi|167901241|ref|ZP_02488446.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei NCTC 13177]
Length = 201
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLFGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SGQ+++ + +F+K+ E LV HD+LDL G +LK GGG +GHNGLK IS
Sbjct: 64 QTYMNRSGQAVVALAHFFKILPTE-ILVAHDELDLPPGAAKLKLGGGSSGHNGLKDISAH 122
Query: 122 -CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 123 LSSQQYWRLRIGIGHPRD 140
>gi|253990020|ref|YP_003041376.1| peptidyl-tRNA hydrolase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781470|emb|CAQ84633.1| peptidyl-tRNA hydrolase [Photorhabdus asymbiotica]
Length = 196
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 98/185 (52%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + + G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLAQSHNQSLKEESKFFGYTARINIYGHDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + +FY++ + LV HD+LDL G ++K GG GHNGLK I K
Sbjct: 66 TTFMNLSGKSVAALASFYRI-QPDEILVAHDELDLPPGVAKMKLGGSHGGHNGLKDIQNK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P D ++ VLG + E+ + ID R +L K++
Sbjct: 125 FGNNPNFYRLRIGIGHPGDKNKVVGFVLGTPPTNEKKLIDDAIDEALRCTDILIKQDMDK 184
Query: 180 FLNHI 184
+N +
Sbjct: 185 AINRL 189
>gi|308176603|ref|YP_003916009.1| peptidyl-tRNA hydrolase [Arthrobacter arilaitensis Re117]
gi|307744066|emb|CBT75038.1| peptidyl-tRNA hydrolase [Arthrobacter arilaitensis Re117]
Length = 193
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 108/177 (61%), Gaps = 10/177 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHA---EISEGQL--DGLRT 56
++VAGLGNPG Y NRHNIG M +D + K K HA +I EG++ G R
Sbjct: 6 WLVAGLGNPGAGYAGNRHNIGQMVLDELAQ---RVGSKFKTHASRSQIVEGRMGVGGPRI 62
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L KP FMNLSG + F+ + ++ +V+HD++D+ F T++LK GGG+ GHNGL+
Sbjct: 63 VLAKPTVFMNLSGGPVANAAKFFGI-GVDRLIVVHDEIDIPFDTIKLKRGGGEGGHNGLR 121
Query: 117 SISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
IS+ G K+Y R+R G+GRPP + VL +FS E+ L +IDN A ++ LL
Sbjct: 122 DISKAMGSKDYLRVRAGVGRPPGRMDTAKWVLQDFSKAEKADLPFLIDNCADAVELL 178
>gi|330465679|ref|YP_004403422.1| peptidyl-tRNA hydrolase [Verrucosispora maris AB-18-032]
gi|328808650|gb|AEB42822.1| peptidyl-tRNA hydrolase [Verrucosispora maris AB-18-032]
Length = 196
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 107/169 (63%), Gaps = 5/169 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQL--DGLRTIL 58
++V GLGNPG EY NRHN+GFM D + + K+ A+++E +L G + +L
Sbjct: 8 WLVVGLGNPGREYAGNRHNVGFMVADLLADRLGVKFGRYKRAMADVAEARLGFGGPKLVL 67
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG + + F+K+P + + +HD+LD+++G +R+K GGG+ GHNGL+S+
Sbjct: 68 LKPLTYMNLSGGPVASLAQFFKVPAAQ-VVAVHDELDIEYGQVRVKFGGGEGGHNGLRSM 126
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
S+ K+Y R+R GIGRPP +VL +F + ER L ++D A
Sbjct: 127 SKSLATKDYVRVRFGIGRPPGRQDPADYVLSDFGAAERKELDFLVDRAA 175
>gi|149369576|ref|ZP_01889428.1| peptidyl-tRNA hydrolase [unidentified eubacterium SCB49]
gi|149357003|gb|EDM45558.1| peptidyl-tRNA hydrolase [unidentified eubacterium SCB49]
Length = 234
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 97/169 (57%), Gaps = 3/169 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++AGLGN G +Y RHNIGF +D I H +W+ +I+ + G IL+KP
Sbjct: 50 FLIAGLGNIGPKYENTRHNIGFKVLDYIAK-HEDLSWETVKLGDITTLKKKGRTFILLKP 108
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ ++ K+ ++EN LV+ DDL+L FGT R+KT G GHNGLK I
Sbjct: 109 STFMNLSGKAVKYWLDKEKI-SVENLLVVTDDLNLPFGTFRIKTQGSSGGHNGLKDIQAT 167
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G Y R R GI + +VLG +++ E L+ ++ +++
Sbjct: 168 LGNGKYPRFRFGISDAFAKGRQVDYVLGEWTAQEESELIERLEKAKQAV 216
>gi|78185646|ref|YP_378080.1| peptidyl-tRNA hydrolase [Synechococcus sp. CC9902]
gi|119391028|sp|Q3AUQ0|PTH_SYNS9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78169940|gb|ABB27037.1| peptidyl-tRNA hydrolase [Synechococcus sp. CC9902]
Length = 206
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 95/172 (55%), Gaps = 8/172 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
+ +V GLGNPG +Y RHNIGFM ++R+ F + K H ++ R L+
Sbjct: 6 LSLVVGLGNPGSKYDGTRHNIGFMALERLARREGFSFRQQAKLHGLSADKGFGDQRLRLL 65
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
PQTFMN SG+S+ +++Y E L++ DD+DL G LRL+ G GHNGL+S
Sbjct: 66 MPQTFMNDSGRSVRAALDWYGFQPEEIVLLV-DDMDLPLGRLRLRAQGSAGGHNGLRSTI 124
Query: 120 EKCGKN-YKRLRIGIGRPPDT-----AHIIRHVLGNFSSPERYFLLPIIDNI 165
+ G + RLRIGIG P + A + HVLG FS E+ + ++D +
Sbjct: 125 QHLGTQVFPRLRIGIGAPAENPAERRARTVSHVLGPFSRAEQPCVDAVLDAV 176
>gi|291518348|emb|CBK73569.1| peptidyl-tRNA hydrolase [Butyrivibrio fibrisolvens 16/4]
Length = 189
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 98/173 (56%), Gaps = 2/173 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNP +Y RHN+GF ID I K+ + +G ++G + IL K
Sbjct: 1 MYLIVGLGNPERKYDGTRHNVGFEAIDAISKKFGIEVNHKEHKGLVGKGIINGKKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+ +L + ++Y++ +VI DD+ L G +R++ G GHNGLK+I
Sbjct: 61 PQTYMNLSGECVLPLTDYYEIDPSTEMVVISDDVLLSTGNIRVRKKGSAGGHNGLKNIIA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G N + R+R+G+G + ++ HVLG + +R + ++ + ++ L
Sbjct: 121 LIGSNEFPRIRVGVGE-CENGDMVSHVLGRYDKEDRERVDASMEKVIGAVELF 172
>gi|330837767|ref|YP_004412408.1| Peptidyl-tRNA hydrolase [Spirochaeta coccoides DSM 17374]
gi|329749670|gb|AEC03026.1| Peptidyl-tRNA hydrolase [Spirochaeta coccoides DSM 17374]
Length = 190
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 6/172 (3%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
V LGNPG EY RHN G+M I +W KKFH + ++ L++P T
Sbjct: 8 VVFLGNPGKEYERTRHNAGWMAASLIGDAGDPISWPKKFHGRWTTLRIGNHPVRLLQPLT 67
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK-C 122
+MN SG+S+ E + F+ L + ++ LV+HDD++L FG + L+ GGG GHNGLKSI++
Sbjct: 68 YMNESGRSVAEALTFFSL-SPQDILVVHDDIELPFGMVVLQQGGGLQGHNGLKSIAQALS 126
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ RLR+GIGRP + V FS E +LP+I ++RS + K
Sbjct: 127 SPEFGRLRLGIGRPAH-GSVSSFVTSRFSR-EEEIILPLI--LSRSCECIMK 174
>gi|319777783|ref|YP_004137434.1| peptidyl-tRNA hydrolase [Mycoplasma fermentans M64]
gi|238810160|dbj|BAH69950.1| hypothetical protein [Mycoplasma fermentans PG18]
gi|318038858|gb|ADV35057.1| Peptidyl-tRNA hydrolase [Mycoplasma fermentans M64]
Length = 186
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 102/169 (60%), Gaps = 7/169 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG++Y +HNIGF+ +D+I + K+KF+ ++ + IL K
Sbjct: 1 MKLIVGLGNPGNQYRFTKHNIGFLTVDKICANFNLTLTKEKFNGFYAKTE----DFILAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+ + + +FYK+ + + L+IHD+ D + G +K GG AGHNG++SI
Sbjct: 57 PTTYMNNSGEFVQAIASFYKI-DPSDILIIHDEKDYEIGQAAIKVGGSSAGHNGVQSIIN 115
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
N +KRLRIGIGR P + +VL NF+S + + +++ A++
Sbjct: 116 ALRSNEFKRLRIGIGRDPKM-ELKDYVLSNFTSDQMLVVEQVLNVAAQA 163
>gi|239907581|ref|YP_002954322.1| peptidyl-tRNA hydrolase [Desulfovibrio magneticus RS-1]
gi|259535170|sp|C4XHR2|PTH_DESMR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|239797447|dbj|BAH76436.1| peptidyl-tRNA hydrolase [Desulfovibrio magneticus RS-1]
Length = 211
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 95/165 (57%), Gaps = 15/165 (9%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID----RIHSFHFFP----AWKKKFHA-EISEGQLDG 53
I+ GLGNPG Y RHN GFM +D R P +K A +S L G
Sbjct: 6 IIVGLGNPGPRYAATRHNFGFMVLDALMERARQLGGAPKATLTGRKDLEAVTLSLPVLPG 65
Query: 54 ---LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
+ +KP TFMNLSG+++ ++FYKL + + V+HD+LDL G +RLK GGG+A
Sbjct: 66 GAFAQFACVKPLTFMNLSGRAVRAALDFYKLAPTDVF-VLHDELDLPLGRMRLKRGGGNA 124
Query: 111 GHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
GHNGLKSI+++ G + RLR+GIGR P+ + +VL F E
Sbjct: 125 GHNGLKSINQELGSPEFVRLRLGIGR-PEGRDVAGYVLEAFRGDE 168
>gi|19552161|ref|NP_600163.1| peptidyl-tRNA hydrolase [Corynebacterium glutamicum ATCC 13032]
gi|45477195|sp|Q8NRV6|PTH2_CORGL RecName: Full=Peptidyl-tRNA hydrolase 2; Short=PTH 2
gi|21323701|dbj|BAB98328.1| Peptidyl-tRNA hydrolase [Corynebacterium glutamicum ATCC 13032]
Length = 204
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 89/152 (58%), Gaps = 13/152 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH----FFPAWK-KKFHAEISEGQLDGLRT 56
++V GLGNPG +Y RHN+G+MC D + H PA K +++ G
Sbjct: 25 WLVVGLGNPGAKYESTRHNVGYMCQDMLIDAHQQQPLTPATGYKALTTQLAPG------V 78
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+ ++ TFMN SGQ + + +P E +VIHD+LDL G +RLK GG + GHNGLK
Sbjct: 79 LAVRSTTFMNHSGQGVAPIAAALGIPA-ERIIVIHDELDLPAGKVRLKKGGNENGHNGLK 137
Query: 117 SISEKCG-KNYKRLRIGIGRPPDTAHIIRHVL 147
S++E+ G ++Y R+RIGI RPP + +VL
Sbjct: 138 SLTEELGTRDYLRVRIGISRPPAGMAVPDYVL 169
>gi|62389825|ref|YP_225227.1| peptidyl-tRNA hydrolase [Corynebacterium glutamicum ATCC 13032]
gi|41325160|emb|CAF19641.1| PEPTIDYL-TRNA HYDROLASE [Corynebacterium glutamicum ATCC 13032]
Length = 201
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 89/152 (58%), Gaps = 13/152 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH----FFPAWK-KKFHAEISEGQLDGLRT 56
++V GLGNPG +Y RHN+G+MC D + H PA K +++ G
Sbjct: 22 WLVVGLGNPGAKYESTRHNVGYMCQDMLIDAHQQQPLTPATGYKALTTQLAPG------V 75
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+ ++ TFMN SGQ + + +P E +VIHD+LDL G +RLK GG + GHNGLK
Sbjct: 76 LAVRSTTFMNHSGQGVAPIAAALGIPA-ERIIVIHDELDLPAGKVRLKKGGNENGHNGLK 134
Query: 117 SISEKCG-KNYKRLRIGIGRPPDTAHIIRHVL 147
S++E+ G ++Y R+RIGI RPP + +VL
Sbjct: 135 SLTEELGTRDYLRVRIGISRPPAGMAVPDYVL 166
>gi|145593349|ref|YP_001157646.1| aminoacyl-tRNA hydrolase [Salinispora tropica CNB-440]
gi|145302686|gb|ABP53268.1| peptidyl-tRNA hydrolase [Salinispora tropica CNB-440]
Length = 196
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID-RIHSFHFFPAWKKKFHAEISEGQ--LDGLRTIL 58
++V GLGNPG +Y NRHN+GF+ D + K+ AE++EG+ L G R +L
Sbjct: 8 WLVVGLGNPGRQYAGNRHNVGFLVADLLVGRLGARFGRHKRAMAEVAEGRSGLGGPRLVL 67
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG ++ + FYK+P + ++D+LD+ +G +R+K GGG+ GHNGL+S+
Sbjct: 68 VKPLTYMNLSGAAVAGLAQFYKVPP-ARVVAVYDELDIPYGQVRVKFGGGEGGHNGLRSM 126
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
++ G K Y R+R GIGRPP VL +F + ER L ++D A
Sbjct: 127 TKSLGTKEYARVRFGIGRPPARRDPADFVLSDFGTVERKELDFLVDRAA 175
>gi|256420580|ref|YP_003121233.1| peptidyl-tRNA hydrolase [Chitinophaga pinensis DSM 2588]
gi|256035488|gb|ACU59032.1| peptidyl-tRNA hydrolase [Chitinophaga pinensis DSM 2588]
Length = 193
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 92/154 (59%), Gaps = 3/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY + RHNIGF D H +++ A+++E + G ++IKP
Sbjct: 3 YLIVGLGNIGTEYEQTRHNIGFDIADAFVKKHG-GTYREDRLADVAEVKWKGRIFVVIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M+ K+P LEN LV+ DDL L +RL+ GG DAG NGLKSI E
Sbjct: 62 TTYMNLSGKAVKYWMDKEKVP-LENILVLVDDLALPLEVIRLRPGGSDAGQNGLKSIQEL 120
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G N Y RLR GIG + VLG +++ E
Sbjct: 121 LGTNQYPRLRFGIGNNYPRGRQVEFVLGKWTNDE 154
>gi|227522402|ref|ZP_03952451.1| peptidyl-tRNA hydrolase [Lactobacillus hilgardii ATCC 8290]
gi|227090460|gb|EEI25772.1| peptidyl-tRNA hydrolase [Lactobacillus hilgardii ATCC 8290]
Length = 189
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 99/170 (58%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN GFM ++ + +K +A++ ++G + ++++
Sbjct: 4 MKMIVGLGNIGPQYDGTRHNTGFMVVEEFAKKYGISIKTRKMNAKMGSAFVNGQKVLVVE 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +M+++++ N ++ +V+HDD+DL G +R+K G GHNG+KS+
Sbjct: 64 PTTFMNDSGIAVKPLMSYFEIEN-KDVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSLIN 122
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +++ R+R+GI P ++ +VLG FS + DN +L
Sbjct: 123 NLGTEHFSRIRVGIAHPDKNNTVVNYVLGRFSKSQLPEFKIATDNAVNAL 172
>gi|187736599|ref|YP_001878711.1| Aminoacyl-tRNA hydrolase [Akkermansia muciniphila ATCC BAA-835]
gi|238691875|sp|B2UPQ2|PTH_AKKM8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|187426651|gb|ACD05930.1| Aminoacyl-tRNA hydrolase [Akkermansia muciniphila ATCC BAA-835]
Length = 190
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 88/159 (55%), Gaps = 9/159 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG--QLDGLRTILIK 60
++ GLGNPG Y + RHN GFM +DR+ + W F A+ G +L+K
Sbjct: 7 MIVGLGNPGRTYEDTRHNAGFMVLDRLAA-----RWGAVFKADRQRKCEVAAGPGVLLVK 61
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + +M F+KL + + VIHD++D G ++L+ G GHNG+KS+
Sbjct: 62 PSTFMNESGLCVGPMMRFFKL-DPRSVFVIHDEVDFPLGVIKLREKGSAGGHNGIKSLIA 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G + + RLR GIG+P +I HVLG F ER L
Sbjct: 121 HMGTQEFPRLRFGIGQPRGKGEMIGHVLGKFRPEERELL 159
>gi|119963338|ref|YP_947126.1| peptidyl-tRNA hydrolase [Arthrobacter aurescens TC1]
gi|166199302|sp|A1R4G4|PTH_ARTAT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119950197|gb|ABM09108.1| peptidyl-tRNA hydrolase [Arthrobacter aurescens TC1]
Length = 194
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 109/174 (62%), Gaps = 4/174 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTILI 59
+++ GLGNPG EY NRHN+G M +D + S K A++ EG+L G R +L
Sbjct: 5 WLIVGLGNPGSEYSNNRHNVGQMVLDELASRMGGKFKVHKARAQVVEGRLGIGGPRVVLA 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN+SG + + NF+ + ++ + +HD++D+ F T++LK GGG+ GHNGL+ IS
Sbjct: 65 KPMTYMNVSGGPVAGLCNFFDIAP-DHVIAVHDEIDIPFNTVKLKMGGGEGGHNGLRDIS 123
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ K+Y R+R+G+GRPP +VL +F++ E+ L ++D A ++ LL
Sbjct: 124 KALATKDYLRVRVGVGRPPGRMETADYVLRDFATAEKKELPFLLDEAADAVELL 177
>gi|220904722|ref|YP_002480034.1| Aminoacyl-tRNA hydrolase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254783864|sp|B8J0S9|PTH_DESDA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219869021|gb|ACL49356.1| Aminoacyl-tRNA hydrolase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 229
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 89/154 (57%), Gaps = 9/154 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLR------- 55
++ GLGNPG Y RHN GF ID F + + + QL +R
Sbjct: 6 VLVGLGNPGARYEGTRHNCGFALIDAFVDFGYRHGTVDEMNGGKFSCQLWRVRLPRLDGC 65
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+ KPQTFMNLSGQ + +++++KL + +V HD+LD+ G LR K GGG+AGHNGL
Sbjct: 66 WLAAKPQTFMNLSGQCVQPLLSWHKL-KAADLVVAHDELDIPPGELRFKFGGGNAGHNGL 124
Query: 116 KSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLG 148
KSI+E G ++ RLR+GIGRPP + VLG
Sbjct: 125 KSITELLGTPDFYRLRMGIGRPPHKGDVTNWVLG 158
>gi|50085940|ref|YP_047450.1| peptidyl-tRNA hydrolase [Acinetobacter sp. ADP1]
gi|68052955|sp|Q6F8I7|PTH_ACIAD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|49531916|emb|CAG69628.1| peptidyl-tRNA hydrolase [Acinetobacter sp. ADP1]
Length = 193
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++++ + K KFH GQ++G L+ P
Sbjct: 6 LIVGLGNPGAEYAQTRHNAGFWFVEQLADRYNITLKKDPKFHGFSGRGQIEGHDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS++ FY++ + E L+ HD+LD+D G +RLKTGGG GHNGL+ I
Sbjct: 66 TTFMNRSGQSVVPFSKFYQI-SPEAILIAHDELDMDPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG E+ + I + + LL + +
Sbjct: 125 IGANFHRLRIGIGHPGSKDRVSGHVLGKAPQNEQTLMEDAIHHALSNTRLLVDGQIAQAM 184
Query: 182 NHI 184
N I
Sbjct: 185 NQI 187
>gi|284007362|emb|CBA72746.1| peptidyl-tRNA hydrolase [Arsenophonus nasoniae]
Length = 196
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 94/173 (54%), Gaps = 4/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G ++ + ++ + KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYALTRHNAGAWYVELLAKHYNQLLKEESKFFGYTARINLAGNDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+L + NFY++ E LV HD+LDL GT ++K GG + GHNGLK I K
Sbjct: 66 TTYMNLSGKSVLALANFYRIKPAE-ILVAHDELDLMPGTAKIKLGGSNGGHNGLKDIQNK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G N+ RLRIGIG P D ++ VL + E+ + ID P+L
Sbjct: 125 LGNDPNFYRLRIGIGHPGDKNKVVGFVLSKPTLAEQKLINDTIDEAIGCTPIL 177
>gi|311108747|ref|YP_003981600.1| peptidyl-tRNA hydrolase [Achromobacter xylosoxidans A8]
gi|310763436|gb|ADP18885.1| peptidyl-tRNA hydrolase [Achromobacter xylosoxidans A8]
Length = 198
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 82/136 (60%), Gaps = 3/136 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GF D + A +K F +++ +L +L+KP
Sbjct: 7 LIVGLGNPGPDYETTRHNAGFWLADHLADDLRASFALEKSFFGMVAKSRLGADNVLLLKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FYKL E LV+HD+LDL G ++LK GGG AGHNGLK I
Sbjct: 67 NTYMNRSGQAVGALARFYKL-TPEQVLVLHDELDLMPGQVKLKQGGGHAGHNGLKDIQAA 125
Query: 122 CGK-NYKRLRIGIGRP 136
G N+ RLRIGIG P
Sbjct: 126 LGSPNFWRLRIGIGHP 141
>gi|38233493|ref|NP_939260.1| peptidyl-tRNA hydrolase [Corynebacterium diphtheriae NCTC 13129]
gi|38199753|emb|CAE49413.1| Putative peptidyl tRNA hydrolase [Corynebacterium diphtheriae]
Length = 180
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 93/153 (60%), Gaps = 9/153 (5%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG---QLDGLRTILIKPQ 62
GLGNPG Y RHN+G+M +D + PA + + G ++ G R ++++
Sbjct: 2 GLGNPGVRYASTRHNVGYMVVDEL----LGPAELRPLRGFKASGAVIEVGGCRVLVVRSS 57
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMN SG+++ ++ Y + + ++ +V+HD+LDL +R+K GG + GHNGLKS+S+
Sbjct: 58 TFMNTSGEAVGPIVQEYGV-SPDHVVVVHDELDLPAHKVRVKVGGNENGHNGLKSVSQWL 116
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G ++Y R+R+GIGRPP + +VLG S E
Sbjct: 117 GTRDYVRIRVGIGRPPRGGTVPDYVLGALDSGE 149
>gi|294673024|ref|YP_003573640.1| aminoacyl-tRNA hydrolase [Prevotella ruminicola 23]
gi|294472092|gb|ADE81481.1| aminoacyl-tRNA hydrolase [Prevotella ruminicola 23]
Length = 190
Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 8/165 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTIL 58
+++ GLGN G EY RHN GFM +D + + HF K + ++E L G + IL
Sbjct: 4 YLIVGLGNIGDEYENTRHNTGFMVLDAFAKASNIHF----DDKRYGFVAETSLKGRKVIL 59
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG ++ +N + LVI DD+ L G RLK+ G + GHNGL I
Sbjct: 60 LKPSTYMNLSGNAVRYWLNKENIEQ-SRLLVISDDVALPLGAFRLKSSGSNGGHNGLGHI 118
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+ G+NY RLR+GIG + VLG + + L P ID
Sbjct: 119 QQLIGQNYARLRMGIGNDFPRGMQVDWVLGKYDEEDMKTLAPSID 163
>gi|304385534|ref|ZP_07367878.1| aminoacyl-tRNA hydrolase [Pediococcus acidilactici DSM 20284]
gi|304328038|gb|EFL95260.1| aminoacyl-tRNA hydrolase [Pediococcus acidilactici DSM 20284]
Length = 185
Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 106/185 (57%), Gaps = 4/185 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY + RHN GFM +D + + +K A + E +G + +L+K
Sbjct: 1 MKMIVGLGNIGKEYDQTRHNTGFMVVDALAKKYGVDHFKIHHEAMVGEFFSNGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M++Y L L + +V++DD+D+ G +RL+ G GHNG+KS+
Sbjct: 61 PTTYMNDSGRAVRPLMDYYDLA-LTDLIVVYDDMDMPVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERY-FLLPIIDNIARSLPLLAKREDV 178
G + ++RLR+GI P ++ +VLG F+ ++ F + + + IA LA E
Sbjct: 120 HLGTEKFRRLRVGIEHPAHQK-VVDYVLGRFTKEQKADFEIGVQNAIAALDDWLAGAEFS 178
Query: 179 SFLNH 183
+N
Sbjct: 179 QLMNQ 183
>gi|183601452|ref|ZP_02962822.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
HN019]
gi|219683507|ref|YP_002469890.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
AD011]
gi|241191048|ref|YP_002968442.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241196454|ref|YP_002970009.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|254783852|sp|B8DTI5|PTH_BIFA0 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|183219058|gb|EDT89699.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
HN019]
gi|219621157|gb|ACL29314.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
AD011]
gi|240249440|gb|ACS46380.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240251008|gb|ACS47947.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|295794037|gb|ADG33572.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis V9]
Length = 199
Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 103/167 (61%), Gaps = 18/167 (10%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH---SFHFFPAWKKKFHAEISEGQL----DGL 54
+++ GLGNPG +Y RHN+GFM ++ + S HF K A++ +G +
Sbjct: 6 WLIVGLGNPGAKYRNTRHNMGFMTVNELAKRWSIHFA---NHKGLADLGKGTMSLNGQTA 62
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
+ L KP T+MN SGQ++ + +Y + NL++ +VIHDD+DL+FG ++LK+GG GHNG
Sbjct: 63 KVFLCKPLTYMNDSGQAVQSIREYYHI-NLDHIVVIHDDMDLEFGRIKLKSGGSAGGHNG 121
Query: 115 LKSISEKC--GKNYKRLRIGIGRPPDT--AH--IIRHVLGNFSSPER 155
+KSI ++C +Y R+R+G+G + AH I VLG F++ +R
Sbjct: 122 IKSI-DRCLHSPDYARVRMGVGHASRSGDAHDNTINWVLGEFNAAQR 167
>gi|212550488|ref|YP_002308805.1| peptidyl-tRNA hydrolase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|229620034|sp|B6YQC2|PTH_AZOPC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|212548726|dbj|BAG83394.1| peptidyl-tRNA hydrolase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 186
Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 91/158 (57%), Gaps = 9/158 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++VAGLGN G +Y +RHNIGFM +D + + K + I+ +L L+KP
Sbjct: 3 YLVAGLGNVGQKYENSRHNIGFMILDALAKASSV-VFTDKCYGAIASLKLKNKCLFLLKP 61
Query: 62 QTFMNLSGQSL---LEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
T+MNLSG ++ L+ N Y EN L++ DDL L FG+LRLKT G D GHNGLK+I
Sbjct: 62 STYMNLSGNAIRYWLQKENIYS----ENLLILVDDLSLPFGSLRLKTKGSDGGHNGLKNI 117
Query: 119 SEKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K Y RLR GIG + I +VL NF+ E+
Sbjct: 118 QYTLRTKYYNRLRFGIGNNFPSGCQINYVLDNFTKEEK 155
>gi|193217035|ref|YP_002000277.1| peptidyl-tRNA hydrolase [Mycoplasma arthritidis 158L3-1]
gi|238692484|sp|B3PNH1|PTH_MYCA5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|193002358|gb|ACF07573.1| peptidyl-tRNA hydrolase [Mycoplasma arthritidis 158L3-1]
Length = 181
Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 101/175 (57%), Gaps = 19/175 (10%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGL-----R 55
M ++ GLGNPG EY + RHNIGFM +D+I +K + ++E + +G+
Sbjct: 1 MKLIVGLGNPGTEYEKTRHNIGFMAVDKIC---------EKLNISLNEKKFNGIFYRNKD 51
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
IL KP T+MN SG + +M +Y + +E+ +V++DD+DL G ++ G GHNG+
Sbjct: 52 FILAKPLTYMNKSGDFVQALMQYYDIS-VEDLIVVYDDMDLLIGKAVIRQKGSSGGHNGI 110
Query: 116 KSISEKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
K I EK +N KRL++GIGR + I VLG FS + + I+D +A +L
Sbjct: 111 KDIIEKLKTENIKRLKVGIGRGDNA---INFVLGKFSIADYQIIDKILDGVADAL 162
>gi|308190380|ref|YP_003923311.1| aminoacyl-tRNA hydrolase [Mycoplasma fermentans JER]
gi|307625122|gb|ADN69427.1| aminoacyl-tRNA hydrolase [Mycoplasma fermentans JER]
Length = 186
Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 101/169 (59%), Gaps = 7/169 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HNIGF+ +D+I + K+KF+ ++ + IL K
Sbjct: 1 MKLIVGLGNPGSQYRFTKHNIGFLTVDKICANFNLTLTKEKFNGFYAKTE----DFILAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+ + + +FYK+ + + L+IHD+ D + G +K GG AGHNG++SI
Sbjct: 57 PTTYMNNSGEFVQAIASFYKI-DPSDILIIHDEKDYEIGQAAIKVGGSSAGHNGVQSIIN 115
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
N +KRLRIGIGR P + +VL NF+S + + +++ A++
Sbjct: 116 ALRSNEFKRLRIGIGRDPKM-ELKDYVLSNFTSDQMLVVEQVLNVAAQA 163
>gi|170017777|ref|YP_001728696.1| peptidyl-tRNA hydrolase [Leuconostoc citreum KM20]
gi|169804634|gb|ACA83252.1| Peptidyl-tRNA hydrolase [Leuconostoc citreum KM20]
Length = 213
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M V GLGN G +Y + RHNIGFM +D H K A + + +G + +++K
Sbjct: 25 MKYVIGLGNIGTKYEKTRHNIGFMAVDNFAEAHHVAFSPSKQFAIVGKTSTNGEQVLIVK 84
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ ++++Y + LV+ DD+DL FG LR + G GHNGLKSI
Sbjct: 85 PTTYMNDSGKAVRALLDYYGGHIDSDVLVLVDDMDLPFGKLRFRGKGSAGGHNGLKSIIA 144
Query: 121 KCG-KNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G + + RL+ G+G P + +I +VLG F+ E+ + ++D +++ + +V
Sbjct: 145 HTGSQAFLRLKFGLGHPQHEQEAVINYVLGQFTRSEQPEIDQMLDRSTQAIDMWLSGAEV 204
Query: 179 SFLNH 183
S L++
Sbjct: 205 SQLSN 209
>gi|269468549|gb|EEZ80198.1| peptidyl-tRNA hydrolase [uncultured SUP05 cluster bacterium]
Length = 146
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 87/135 (64%), Gaps = 5/135 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y +RHN+GF +D + S + +KK KF E+S+ + G L+K
Sbjct: 5 LIVGLGNPGKDYQSHRHNVGFWFVDALASL-YTGVFKKETKFFGEVSQINVAGSTVRLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQS+ + NFY++ N + LV+HD+LDL+ G ++K GG GHNGL+ +
Sbjct: 64 PNTYMNRSGQSIQSIANFYQI-NTDEILVVHDELDLNPGVAKIKFDGGHGGHNGLRDTID 122
Query: 121 KCG-KNYKRLRIGIG 134
G K + RLR+GIG
Sbjct: 123 TLGSKKFHRLRLGIG 137
>gi|257438136|ref|ZP_05613891.1| aminoacyl-tRNA hydrolase [Faecalibacterium prausnitzii A2-165]
gi|257199467|gb|EEU97751.1| aminoacyl-tRNA hydrolase [Faecalibacterium prausnitzii A2-165]
Length = 257
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 93/156 (59%), Gaps = 4/156 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++++AGLGNP +Y RHN GF +D + K KF +G++DG + +L+K
Sbjct: 71 IWLIAGLGNPEAKYDGTRHNAGFAALDSLAGKWGISVSKTKFQGLWGQGEVDGHKVVLLK 130
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG S+ + F+K+P ++ +V+ DD+ G LR++ G GHNGLKSI
Sbjct: 131 PLTYMNLSGDSIAPLAGFFKIP-ADHVIVLCDDITQAPGKLRIRPSGSAGGHNGLKSIIA 189
Query: 121 KC-GKNYKRLRIGIGRPPDTAH-IIRHVLGNFSSPE 154
+ G+N+ R+RIG+G P + + VLG F PE
Sbjct: 190 RLGGENFPRIRIGVGAKPRPDYDLADWVLGKF-PPE 224
>gi|256372366|ref|YP_003110190.1| peptidyl-tRNA hydrolase [Acidimicrobium ferrooxidans DSM 10331]
gi|256008950|gb|ACU54517.1| peptidyl-tRNA hydrolase [Acidimicrobium ferrooxidans DSM 10331]
Length = 192
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTIL 58
IV GLGNPG Y RHN G + +D R P + + G+L R +L
Sbjct: 1 MIVVGLGNPGARYRFTRHNAGALTVDLLARRLDVRLTPGHRSI----VGSGRLGDHRAVL 56
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
PQT+MN SG ++ V+ ++ + +V+HD+LDL G ++LK GGG AGHNGL+SI
Sbjct: 57 AVPQTYMNDSGAAVGAVLRYFHADPVTQLVVVHDELDLVLGRVQLKYGGGLAGHNGLRSI 116
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G +++ R+RIGIGRP ++ VL PER
Sbjct: 117 VAHIGTRDFWRVRIGIGRPAGRQAVVDWVLTEVRGPER 154
>gi|163841716|ref|YP_001626121.1| peptidyl-tRNA hydrolase [Renibacterium salmoninarum ATCC 33209]
gi|189038160|sp|A9WU36|PTH_RENSM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|162955192|gb|ABY24707.1| peptidyl-tRNA hydrolase [Renibacterium salmoninarum ATCC 33209]
Length = 194
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 105/175 (60%), Gaps = 5/175 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTILI 59
++V GLGNPG +Y RHNIGFM + + S K A ++EG+L G + +L
Sbjct: 5 WLVVGLGNPGPDYSHTRHNIGFMVAEELASRIGASFKSNKSRALVAEGRLGMGGPKLVLA 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQTFMNLSG + FY L +N + + D++D+ F T++LK GGG+ GHNGL+ IS
Sbjct: 65 KPQTFMNLSGGPTSALAKFYDL-GADNVIAVQDEIDIPFNTIKLKIGGGEGGHNGLRDIS 123
Query: 120 EKCG-KNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ G K Y R+R+G+GRPP HVL FS+ E+ L +I + A ++ LL
Sbjct: 124 KALGAKEYLRVRVGVGRPPGGQGDAAGHVLKVFSTAEKKELPFLIQDAADAVELL 178
>gi|193214407|ref|YP_001995606.1| peptidyl-tRNA hydrolase [Chloroherpeton thalassium ATCC 35110]
gi|193087884|gb|ACF13159.1| Aminoacyl-tRNA hydrolase [Chloroherpeton thalassium ATCC 35110]
Length = 202
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y RHNIGF +D + + K + + + G +L+KP
Sbjct: 13 LIVGLGNPGSKYDGTRHNIGFEVVDALAARFGEDFRSGKGEYDFCKTKHRGEEVLLVKPT 72
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG+++ M FYK+ L+ LVI DD +L G +R++ G D G NGLK+I +
Sbjct: 73 TYMNLSGKAVRHAMAFYKISILD-ILVICDDFNLPLGAVRIRPSGTDGGQNGLKNIIQLV 131
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G+N + RLR+GIG P + VLG F E LPI++ AR
Sbjct: 132 GRNDFARLRVGIG-APKVQNASSFVLGKFGESE----LPIVEETAR 172
>gi|326574300|gb|EGE24247.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis O35E]
Length = 190
Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 2/168 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN GF ++++ F + KKFH ++ G + L+ P
Sbjct: 5 LIVGLGNPGVQYQQTRHNAGFWFVEQLADKFGIRLIFDKKFHGQVGRGTIHNQEVRLLLP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+TFMN SGQS+ FY + + E+ L+ HD+LD+ G+++LKTGGG GHNGLK I
Sbjct: 65 ETFMNRSGQSVAPFTKFYGI-HPESILIAHDELDIPVGSIKLKTGGGHGGHNGLKDIVPH 123
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G ++ RLRIGIGRP ++ + HVL S+ +R + ID S+
Sbjct: 124 IGADFHRLRIGIGRPMHSSQVSGHVLSKPSTDDRISITAAIDCAVASI 171
>gi|296113816|ref|YP_003627754.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis RH4]
gi|295921510|gb|ADG61861.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis RH4]
gi|326562160|gb|EGE12488.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis 7169]
gi|326564475|gb|EGE14701.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis 46P47B1]
gi|326566226|gb|EGE16378.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis 103P14B1]
gi|326568385|gb|EGE18465.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis BC7]
gi|326574884|gb|EGE24814.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis 101P30B1]
gi|326576208|gb|EGE26123.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis CO72]
Length = 190
Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 2/168 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN GF ++++ F + KKFH ++ G + L+ P
Sbjct: 5 LIVGLGNPGVQYQQTRHNAGFWFVEQLADKFGIRLIFDKKFHGQVGRGTIHNQEVRLLLP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+TFMN SGQS+ FY + + E+ L+ HD+LD+ G+++LKTGGG GHNGLK I
Sbjct: 65 ETFMNRSGQSVAPFTKFYGI-HPESILIAHDELDIPVGSIKLKTGGGHGGHNGLKDIVPH 123
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G ++ RLRIGIGRP ++ + HVL S+ +R + ID S+
Sbjct: 124 IGADFHRLRIGIGRPMHSSQVSGHVLSKPSADDRISITAAIDCAVASI 171
>gi|323140869|ref|ZP_08075782.1| aminoacyl-tRNA hydrolase [Phascolarctobacterium sp. YIT 12067]
gi|322414607|gb|EFY05413.1| aminoacyl-tRNA hydrolase [Phascolarctobacterium sp. YIT 12067]
Length = 198
Score = 110 bits (276), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 10/184 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIH---SFHFFPAWKKKFHAEISEGQLDGLRTI 57
M ++ GLGN G EY RHNIGFM +D + F + + AE + + I
Sbjct: 1 MKLIVGLGNIGREYENTRHNIGFMVVDELARRLGVSFGKEDRSAYMAEYRAPE----KII 56
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
+IKP T+MNLSG ++ NFY + + ++ VI DD+D+ G LR++ G GHNG+KS
Sbjct: 57 IIKPTTYMNLSGVAVGAYANFYHI-DPDDIAVIQDDMDMPVGQLRIRRKGSAGGHNGIKS 115
Query: 118 ISEKCGKN-YKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
I+E G + Y R +IGIG P + ++ HVL F ++ + + +A +L K
Sbjct: 116 ITEHLGTDAYPRFKIGIGHPARNNKAVVNHVLHAFQGEDKTAIEAAVAEMATALEEWIKS 175
Query: 176 EDVS 179
D+
Sbjct: 176 GDIE 179
>gi|171060170|ref|YP_001792519.1| peptidyl-tRNA hydrolase [Leptothrix cholodnii SP-6]
gi|238689108|sp|B1Y3Q1|PTH_LEPCP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|170777615|gb|ACB35754.1| Aminoacyl-tRNA hydrolase [Leptothrix cholodnii SP-6]
Length = 213
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 89/162 (54%), Gaps = 7/162 (4%)
Query: 6 GLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
GLGNPG EY RHN GF D R + P + +H ++ G L++P
Sbjct: 7 GLGNPGPEYEATRHNAGFWWTDALARRWNCQLQP--DRSYHGLMARCTQRGTPVWLLQPM 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG+S+ + F+K+ E LV+HD+LDL G ++LK GG AGHNGLK I +
Sbjct: 65 TYMNLSGKSVAALARFFKIEPAE-ILVVHDELDLLPGQMKLKQGGSAAGHNGLKDIQAQL 123
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G + RLR+GIG P A + +VL S ER + ID
Sbjct: 124 GNPEFWRLRLGIGHPGVKAEVAAYVLRKPPSAEREAIEACID 165
>gi|295132328|ref|YP_003583004.1| peptidyl-tRNA hydrolase [Zunongwangia profunda SM-A87]
gi|294980343|gb|ADF50808.1| peptidyl-tRNA hydrolase [Zunongwangia profunda SM-A87]
Length = 209
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 89/154 (57%), Gaps = 3/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++AGLGN G +Y RHNIGF +D + + +K +I++ + G +L+KP
Sbjct: 25 FLIAGLGNIGPKYENTRHNIGFKILDELAAKQEAVFTTQKL-GDIAQFRYKGRTFVLLKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + K+ +EN LV+ DDL+L FGTLRLKT G D GHNGLK I +
Sbjct: 84 STYMNLSGKAVNYWLQKEKIA-VENLLVVTDDLNLPFGTLRLKTKGSDGGHNGLKDIQAQ 142
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
Y R R GI I +VLG +S E
Sbjct: 143 LNTTKYNRFRFGISAEFSKGQQIDYVLGEWSEEE 176
>gi|326565658|gb|EGE15821.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis 12P80B1]
gi|326567121|gb|EGE17243.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis BC1]
gi|326572286|gb|EGE22281.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis BC8]
Length = 190
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 2/168 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN GF ++++ F + KKFH ++ G + L+ P
Sbjct: 5 LIVGLGNPGVQYQQTRHNAGFWFVEQLADKFGIRLIFDKKFHGQVGRGTIHNQEVRLLLP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+TFMN SGQS+ FY + + E+ L+ HD+LD+ G+++LKTGGG GHNGLK I
Sbjct: 65 ETFMNRSGQSVAPFTKFYGI-HPESILIAHDELDIPVGSIKLKTGGGHGGHNGLKDIVPH 123
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G ++ RLRIGIGRP ++ + HVL S+ +R + ID S+
Sbjct: 124 IGADFHRLRIGIGRPMHSSQVSGHVLSKPSADDRISITSAIDCAVASI 171
>gi|256828486|ref|YP_003157214.1| peptidyl-tRNA hydrolase [Desulfomicrobium baculatum DSM 4028]
gi|256577662|gb|ACU88798.1| peptidyl-tRNA hydrolase [Desulfomicrobium baculatum DSM 4028]
Length = 198
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 93/166 (56%), Gaps = 20/166 (12%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-----------KKKFHAEISEGQL 51
++ GLGNPG +Y RHN GFM D H W + +A++ +
Sbjct: 6 LIVGLGNPGTKYARTRHNFGFMLAD-----HLLEHWAGQPGTACTARSGRLNAQLWDVSE 60
Query: 52 D--GLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGD 109
D R I+ KP TFMNLSGQ + E+ ++P + LV HD+LDL GT+RLK GG
Sbjct: 61 DYGARRWIVAKPLTFMNLSGQVVGELSRKNEIPA-DRILVAHDELDLALGTVRLKFSGGL 119
Query: 110 AGHNGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
AGHNGLKS++ G +++ R+R+GIGRP + + +VL +F E
Sbjct: 120 AGHNGLKSVAAHLGTRDFARIRLGIGRPEGSEAMADYVLRSFMPAE 165
>gi|307701497|ref|ZP_07638515.1| aminoacyl-tRNA hydrolase [Mobiluncus mulieris FB024-16]
gi|307613289|gb|EFN92540.1| aminoacyl-tRNA hydrolase [Mobiluncus mulieris FB024-16]
Length = 198
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 99/185 (53%), Gaps = 16/185 (8%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRI----------HSFHFFPAWKKKFHAEISEGQLDG 53
+ GLGNPG EY + RHN G+M DR S A K + G +D
Sbjct: 1 MVGLGNPGIEYAQTRHNCGYMVTDRFVESVGGKYRNQSLGRGGAMAKVADIRLGYG-IDA 59
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
+ I+ T+MN SG + +++ FY++ + + +V+HDD+DL+F +LK GG + GHN
Sbjct: 60 PQVIVAHTGTYMNTSGPVVGQLLKFYQI-DTAHLVVVHDDIDLNFRCAKLKVGGSNGGHN 118
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPD---TAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
GLKSI + G K++ RLRIG+GRPP ++ VLG F E+ L D + +
Sbjct: 119 GLKSIQQTLGTKDFARLRIGVGRPPSRELGGDVVNWVLGRFPKSEKANLEEFFDRAVQCI 178
Query: 170 PLLAK 174
+A+
Sbjct: 179 NDVAE 183
>gi|284038040|ref|YP_003387970.1| peptidyl-tRNA hydrolase [Spirosoma linguale DSM 74]
gi|283817333|gb|ADB39171.1| peptidyl-tRNA hydrolase [Spirosoma linguale DSM 74]
Length = 186
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 95/168 (56%), Gaps = 6/168 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G EY RHN GFM +DR+ + + F + A ++ Q G + +KP
Sbjct: 3 FLLVGLGNIGPEYALTRHNAGFMVLDRLAAQNDFSFSMTRL-AYTAKWQHKGKQLFFVKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M +P +EN L+I DD DL FG LRLK G GHNGLK+I +
Sbjct: 62 TTYMNLSGKAVSYYMKQENIP-IENILIITDDKDLPFGKLRLKPKGSPGGHNGLKNIDDI 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
G + Y RLR+GIG + VLG F E L+ + D + R+
Sbjct: 121 LGTQEYARLRVGIGNNFSKGRQVDFVLGQFPEDE---LIQLPDYLDRA 165
>gi|167753866|ref|ZP_02425993.1| hypothetical protein ALIPUT_02151 [Alistipes putredinis DSM 17216]
gi|167658491|gb|EDS02621.1| hypothetical protein ALIPUT_02151 [Alistipes putredinis DSM 17216]
Length = 187
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 94/155 (60%), Gaps = 3/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY + RHNIGF +D + ++ A ++ + G +L+KP
Sbjct: 3 YLIVGLGNIGAEYADTRHNIGFDVLDALAEASNTSFTTDRYGA-VATLRSKGHTLVLLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ ++ K+P EN LV+ DD+ L FGT R++T G GHNGLK+I+E
Sbjct: 62 STYMNLSGKAVRYWLDAEKIPR-ENLLVVVDDIALPFGTFRMRTKGSAGGHNGLKNITEL 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + Y R+R GIG H + +VLG+++ ER
Sbjct: 121 LGTEEYSRIRFGIGGDFPRGHQVDYVLGHWNDEER 155
>gi|33595507|ref|NP_883150.1| peptidyl-tRNA hydrolase [Bordetella parapertussis 12822]
gi|33599892|ref|NP_887452.1| peptidyl-tRNA hydrolase [Bordetella bronchiseptica RB50]
gi|46576755|sp|Q7W179|PTH_BORPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|46576761|sp|Q7WNY2|PTH_BORBR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|33565585|emb|CAE40228.1| peptidyl-tRNA hydrolase [Bordetella parapertussis]
gi|33567489|emb|CAE31402.1| peptidyl-tRNA hydrolase [Bordetella bronchiseptica RB50]
Length = 215
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 82/136 (60%), Gaps = 3/136 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GF D + A +K F +++ + G +L+KP
Sbjct: 24 LIVGLGNPGPDYETTRHNAGFWLADHLADDLRTAFALEKGFFGMLAKARHAGENVVLLKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ V FYKL E LV+HD+LDL G +++K GGG AGHNGLK I
Sbjct: 84 ITYMNRSGQSVGAVARFYKLAP-EQVLVLHDELDLLPGQVKIKQGGGHAGHNGLKDIQAA 142
Query: 122 CGK-NYKRLRIGIGRP 136
G N+ RLRIGIG P
Sbjct: 143 LGSPNFWRLRIGIGHP 158
>gi|264676948|ref|YP_003276854.1| peptidyl-tRNA hydrolase [Comamonas testosteroni CNB-2]
gi|262207460|gb|ACY31558.1| peptidyl-tRNA hydrolase [Comamonas testosteroni CNB-2]
Length = 212
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 96/171 (56%), Gaps = 10/171 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+ GLGNPG EY + RHN GF ID R + P ++ + ++ + G L+
Sbjct: 4 LFVGLGNPGPEYEDTRHNAGFWWIDALARELKVNLVP--ERSYWGLMARTSIHGQSIWLL 61
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+PQTFMNLSG+S+ + F+K+ E LV+HD+LD + G ++LK GG GHNGL+ I
Sbjct: 62 EPQTFMNLSGKSVGTLARFFKI-QPEEILVVHDELDFEPGVVKLKLGGSHGGHNGLRDIH 120
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ G NY RLR+GIG P + VL +P++ L I D I SL
Sbjct: 121 AQLGSPNYWRLRVGIGHPGHKGEVASWVLKK-PAPDQLKL--IEDAITHSL 168
>gi|229819487|ref|YP_002881013.1| peptidyl-tRNA hydrolase [Beutenbergia cavernae DSM 12333]
gi|229565400|gb|ACQ79251.1| peptidyl-tRNA hydrolase [Beutenbergia cavernae DSM 12333]
Length = 199
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 108/193 (55%), Gaps = 15/193 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL-------DGL 54
++V G+GNPG +Y NRHN G M D + S K A + +G+L G
Sbjct: 6 WLVVGIGNPGPQYAGNRHNAGAMAADVLASRIGSAFTTHKARAAVVDGRLGTLPGGVPGP 65
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R I+ KP T++NLSG + + FY +P E LV++D+LDL TLRLK GGG+ GHNG
Sbjct: 66 RVIVAKPATYVNLSGGPVAALSTFYDIPA-ERLLVVYDELDLPAHTLRLKLGGGEGGHNG 124
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
L+SIS G ++Y RLRIGIGRPP VL +FS+ ER L ++ A ++
Sbjct: 125 LRSISAALGTRDYVRLRIGIGRPPGRQDPADFVLRDFSAAERVELGVTLEQAADAV---- 180
Query: 174 KREDVSFLNHIVS 186
EDV H+ +
Sbjct: 181 --EDVVVHGHLAA 191
>gi|182414102|ref|YP_001819168.1| aminoacyl-tRNA hydrolase [Opitutus terrae PB90-1]
gi|177841316|gb|ACB75568.1| Aminoacyl-tRNA hydrolase [Opitutus terrae PB90-1]
Length = 194
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK--FHAEISEGQLDGLRTI-LI 59
+VAGLGNPG EY RHN+G++ +D + + AWK + F A ++ G L+
Sbjct: 5 LVAGLGNPGREYASTRHNLGWIVLDALAA-KLGLAWKPQPQFQAAVTRWNRPGHGACWLV 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG ++ + F+KLP +E+ LV++DDL++D G +++ G GHNGL S+
Sbjct: 64 KPLTFMNDSGVAVGALARFHKLP-IESVLVLYDDLNIDLGLVKVSVTGSAGGHNGLASVI 122
Query: 120 EKCGKNYKRLRIGIG-RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
E G + R R+GIG + P + VLG F+ ++ + + + L LL R
Sbjct: 123 EHFGDGFVRYRLGIGPKEPPQMDLKDFVLGKFTPDQQSLVTQNLPSYLSGLDLLLSRGVD 182
Query: 179 SFLNHI 184
+ +N +
Sbjct: 183 AAMNQL 188
>gi|281178390|dbj|BAI54720.1| peptidyl-tRNA hydrolase [Escherichia coli SE15]
Length = 194
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 90/168 (53%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K G G GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGSGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 171
>gi|89094726|ref|ZP_01167661.1| peptidyl-tRNA hydrolase [Oceanospirillum sp. MED92]
gi|89080980|gb|EAR60217.1| peptidyl-tRNA hydrolase [Oceanospirillum sp. MED92]
Length = 198
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 100/172 (58%), Gaps = 4/172 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G ++++ + H P +KK+H S Q+ G L+ P
Sbjct: 9 LIVGLGNPGDKYAQTRHNAGAEFVEQLAARHLAPLKPEKKYHGLYSRAQIGGQTIHLLVP 68
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSGQ++ + NFYK+P E LV HD+LDL G + K GGG GHNGL+ I K
Sbjct: 69 TTFMNLSGQAVAALANFYKIPPQE-ILVAHDELDLPPGIAKFKQGGGHGGHNGLRDIISK 127
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G KN+ RLR+GIG P ++ + VL + ER + +D R L L
Sbjct: 128 LGNNKNFYRLRLGIGHPGHSSQVSGFVLKKAPNKERDATMAALDEAERYLEL 179
>gi|327399266|ref|YP_004340135.1| peptidyl-tRNA hydrolase [Hippea maritima DSM 10411]
gi|327181895|gb|AEA34076.1| Peptidyl-tRNA hydrolase [Hippea maritima DSM 10411]
Length = 193
Score = 110 bits (275), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 95/168 (56%), Gaps = 10/168 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++V GLGNPG EY HN+GFM D + F F K KF E L + ++K
Sbjct: 3 WLVVGLGNPGKEYALTPHNVGFMVCDSLSFLFDFDFTLKNKFKGFFGEFSLGSYKVGVLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG S+ EV +FYK+P L +VIHDD+DL G +++K GH G++SI +
Sbjct: 63 PITYMNLSGISVGEVFSFYKIP-LNRLIVIHDDVDLPLGRIKIKKNSSSGGHKGVESIIQ 121
Query: 121 K-CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
K++ R++IG+GR ++ +VL NF E L I++ R
Sbjct: 122 TLSSKDFARVKIGVGRE---GNVRDYVLRNFKENE----LEIVNQAVR 162
>gi|307299264|ref|ZP_07579065.1| peptidyl-tRNA hydrolase [Thermotogales bacterium mesG1.Ag.4.2]
gi|306915060|gb|EFN45446.1| peptidyl-tRNA hydrolase [Thermotogales bacterium mesG1.Ag.4.2]
Length = 189
Score = 110 bits (275), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 92/156 (58%), Gaps = 5/156 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILI 59
MF+ GLGNPG Y RHN+GF+ ID++ +K+ + A + EG+ + +
Sbjct: 1 MFLFVGLGNPGPRYALTRHNVGFLFIDQMAKLGLRKTVQKRLYEAHLLEGEE---KVYIA 57
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-I 118
KP TFMNLSG ++ +M + ++++DD+ + G +R++ G D GHNGLKS I
Sbjct: 58 KPLTFMNLSGVAVRLLMKDLNFEKKDTLVLVYDDVWIPLGRMRIRESGSDGGHNGLKSVI 117
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
SE +++ R+RIG+G P+ ++ +VLG FS E
Sbjct: 118 SEIGTQSFPRIRIGVGPLPENGDMVDYVLGKFSDDE 153
>gi|40889732|pdb|1RYN|A Chain A, Structure Of The Chloroplast Group Ii Intron Splicing
Factor Crs2
Length = 202
Score = 110 bits (275), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 93/156 (59%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG++Y RHN+GF +DRI + +F + + G + + +++KP
Sbjct: 6 WLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTNQFKSLLGTGSIGEVPVLVVKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q++MN SG+++ + +Y++P L + L+I+DD L G LRL+ GG HNGL+++ E
Sbjct: 66 QSYMNYSGEAIGPLAAYYQVP-LRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEH 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + RL IGIG PP +L FSS ER
Sbjct: 125 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEER 160
>gi|260550955|ref|ZP_05825160.1| peptidyl-tRNA hydrolase [Acinetobacter sp. RUH2624]
gi|260405903|gb|EEW99390.1| peptidyl-tRNA hydrolase [Acinetobacter sp. RUH2624]
Length = 193
Score = 110 bits (275), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++++ + KFH G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS++ FY++ E L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 TTYMNRSGQSVVPFSKFYQIAP-EAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG S E+ + ID+ + LL + + +
Sbjct: 125 IGPNFHRLRIGIGHPGSKERVSGHVLGKAPSSEQSLMDGAIDHALSKVKLLVQGQISQAM 184
Query: 182 NHI 184
N I
Sbjct: 185 NQI 187
>gi|257066461|ref|YP_003152717.1| peptidyl-tRNA hydrolase [Anaerococcus prevotii DSM 20548]
gi|256798341|gb|ACV28996.1| peptidyl-tRNA hydrolase [Anaerococcus prevotii DSM 20548]
Length = 195
Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+ + GLGNPG +Y RHN+GF+ ID + H K KF + +G + G + +L+K
Sbjct: 1 MYYIVGLGNPGLKYENTRHNVGFLTIDYLARKHNIDVRKSKFKSLYGQGTISGHKVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ ++ NFYK + + +VI+DD+D+DFG++R++ G HNG+KSI
Sbjct: 61 PQTYMNNSGEAVRDLKNFYKF-DTDKLIVIYDDIDIDFGSIRIRKKGSAGTHNGMKSIIY 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + + R++I +G+ P+ + VL FS E + ID ++S+ + +
Sbjct: 120 QIQDDSFPRIKIAVGKKPEYMDLANFVLSGFSEKEAEIIRNEIDIASKSIETIIEENIDK 179
Query: 180 FLNHIVSVR 188
+N SVR
Sbjct: 180 SMNLYNSVR 188
>gi|329917507|ref|ZP_08276487.1| Peptidyl-tRNA hydrolase [Oxalobacteraceae bacterium IMCC9480]
gi|327544537|gb|EGF30045.1| Peptidyl-tRNA hydrolase [Oxalobacteraceae bacterium IMCC9480]
Length = 196
Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 86/137 (62%), Gaps = 4/137 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS--FHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D++ + + +F+A ++ ++ L++
Sbjct: 5 LIVGLGNPGPEYEQTRHNAGFWLVDKLANGIARCKLVRETRFNAFAAKAAIEQHEVWLLE 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SGQS+ + FYK+ ++ LV+HD+LDL G RLK GG GHNGLK I+
Sbjct: 65 PQTFMNRSGQSVGALARFYKIA-VDEVLVVHDELDLLPGAARLKKGGSSGGHNGLKDITA 123
Query: 121 KCG-KNYKRLRIGIGRP 136
G ++Y RLR+GIG P
Sbjct: 124 ALGSQDYWRLRLGIGHP 140
>gi|295104238|emb|CBL01782.1| peptidyl-tRNA hydrolase [Faecalibacterium prausnitzii SL3/3]
Length = 192
Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 93/156 (59%), Gaps = 4/156 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++++AGLGNP +Y RHN GF +D + K KF +G+++G + +L+K
Sbjct: 6 IWLIAGLGNPEAKYDGTRHNAGFAALDALADKWNISVGKTKFQGLWGQGEVNGHKVVLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG S+ + F+K+P ++ LV+ DD+ G LR++ G GHNGLKSI
Sbjct: 66 PLTYMNLSGDSIAPMAGFFKIP-ADHVLVLCDDITQAPGKLRIRPSGSAGGHNGLKSIIA 124
Query: 121 KC-GKNYKRLRIGIGRPPDTAH-IIRHVLGNFSSPE 154
+ G+N+ R+RIGIG P + + VLG F PE
Sbjct: 125 RLGGENFPRIRIGIGAKPHPDYDLAAWVLGKF-PPE 159
>gi|313112803|ref|ZP_07798450.1| peptidyl-tRNA hydrolase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624873|gb|EFQ08181.1| peptidyl-tRNA hydrolase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 192
Score = 110 bits (275), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 93/160 (58%), Gaps = 3/160 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++++AGLGNP +Y RHN G+ +D + K KF +G++DG + +L+K
Sbjct: 6 IWLIAGLGNPETKYDGTRHNAGYAALDYLADKWGISVSKTKFEGLWGQGEVDGHKVVLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG S+ F+K+P ++ +V+ DD+ G LR++ G GHNGLKSI
Sbjct: 66 PLTYMNLSGDSIAPTAGFFKIP-ADHVIVLCDDITQSPGKLRIRPSGSAGGHNGLKSIIA 124
Query: 121 KC-GKNYKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFL 158
+ G+N+ R+RIG+G P + + VLG F + + L
Sbjct: 125 RLGGENFPRIRIGVGAKPHPDYDLAAWVLGKFPAEDAKAL 164
>gi|283783132|ref|YP_003373886.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis 409-05]
gi|298253894|ref|ZP_06977481.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 5-1]
gi|283441026|gb|ADB13492.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis 409-05]
gi|297532037|gb|EFH71012.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 5-1]
Length = 199
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 96/163 (58%), Gaps = 10/163 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG--QLDG--LRTI 57
+++AGLGNPG +Y RHN+GFM D + K A++ +G LDG +
Sbjct: 6 WLIAGLGNPGTKYEGTRHNMGFMVADVLAQRWSVSLSDHKGLAKLGKGVMNLDGRVAKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP TFMN SG ++ + ++Y++ ++ ++IHDD+DLDFG +++K GG GHNG++S
Sbjct: 66 LAKPLTFMNDSGAAVSSISSYYQIEP-DHIVIIHDDMDLDFGRIKVKAGGSAGGHNGIRS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDTAH----IIRHVLGNFSSPER 155
I G Y R+R+G+G AH + VLG F++ ++
Sbjct: 125 IDRSLGTPQYSRVRMGVGHAQRGAHAHDNTVNWVLGGFAAAQK 167
>gi|123965518|ref|YP_001010599.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9515]
gi|166229435|sp|A2BUN1|PTH_PROM5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|123199884|gb|ABM71492.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9515]
Length = 199
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 107/192 (55%), Gaps = 12/192 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+FI+ GLGNPG +Y ++RHNIGF+ ++ + K K + +E +++ L
Sbjct: 6 VFII-GLGNPGKQYIKSRHNIGFLLLETFSKKYDAQFTLKNKLKSRYTEFKINDSIYKLF 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SG ++ ++++YK+ +L+ +I DD+DL G +R + G GHNGLK I
Sbjct: 65 MPHTYMNNSGDAVKAIVDWYKI-SLDKVFIIVDDIDLPLGKIRFRKKGSSGGHNGLKDII 123
Query: 120 EKC-GKNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL- 172
K +N+ R++IGIG PP + I HVLGN SS E L + + SL L
Sbjct: 124 NKLQTENFNRIKIGIGSPPINETKKQLNTISHVLGNISSQENSTLEKVYQKVIESLEELD 183
Query: 173 AKRED--VSFLN 182
K ED +S LN
Sbjct: 184 IKNEDYIISELN 195
>gi|89073086|ref|ZP_01159625.1| peptidyl-tRNA hydrolase [Photobacterium sp. SKA34]
gi|89051039|gb|EAR56496.1| peptidyl-tRNA hydrolase [Photobacterium sp. SKA34]
Length = 196
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 94/177 (53%), Gaps = 8/177 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG EY RHN G ++ R+H+ P K+ ++G L+
Sbjct: 7 LLVGLANPGQEYANTRHNAGAWVVEELARVHNVTLRP--DPKYFGLTGRITVNGQDLRLL 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMNLSG+S+ + NF+++ E LV HD+LDL G + K GG GHNGL+ I
Sbjct: 65 IPSTFMNLSGKSVAALANFFQI-KPEEILVAHDELDLPPGVAKFKKSGGHGGHNGLRDII 123
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
K G K++ RLRI IG P D + +VLG + E+ + +D R + +L K
Sbjct: 124 NKMGNNKDFYRLRIAIGHPGDKNRVAGYVLGKAPAKEQELIDAAVDESVRCIDILLK 180
>gi|227548220|ref|ZP_03978269.1| peptidyl-tRNA hydrolase [Corynebacterium lipophiloflavum DSM 44291]
gi|227079694|gb|EEI17657.1| peptidyl-tRNA hydrolase [Corynebacterium lipophiloflavum DSM 44291]
Length = 200
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 101/177 (57%), Gaps = 13/177 (7%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++V GLGNPG EY + RHN+G+M +DR+ S H ++ + DG+ +
Sbjct: 20 QWLVVGLGNPGEEYAKTRHNVGWMALDRLLS-HGGVTLRQDHAVKALVAVKDGI--AYAR 76
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ + +P E +V+HD+LDL G +RL+ GG + GHNGLKS+SE
Sbjct: 77 PLTYMNESGAAVGPLAARLNVP-AERVIVLHDELDLPPGRVRLRRGGSENGHNGLKSLSE 135
Query: 121 KCG-KNYKRLRIGIGRPPDTAH----IIRHVLGNFSS----PERYFLLPIIDNIARS 168
G ++Y R+RIGIGRPP ++ V G+ S+ + L I+D + R+
Sbjct: 136 HLGTRDYVRVRIGIGRPPGGTAVPDWVLSAVTGDVSAETEKAAQAARLVIVDGLERA 192
>gi|254515308|ref|ZP_05127369.1| peptidyl-tRNA hydrolase [gamma proteobacterium NOR5-3]
gi|219677551|gb|EED33916.1| peptidyl-tRNA hydrolase [gamma proteobacterium NOR5-3]
Length = 208
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 93/175 (53%), Gaps = 8/175 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIG---FMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG +Y RHN G + R+ + K+H E+ E G + L+
Sbjct: 7 LIVGLGNPGSQYEGTRHNAGEDFVRELARVAGGSL--KTESKYHGEVGEVFFAGHKLRLL 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMN SG+++ + NFYK+ L+ HD+LD+ G+ R K GG GHNGL+ I
Sbjct: 65 IPHTFMNRSGKAVAALANFYKI-EPPQILIAHDELDMPPGSARFKFDGGHGGHNGLRDIV 123
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K++ RLR+GIG P + +VL S +R + ID R+LPLL
Sbjct: 124 PALGNRKDFHRLRVGIGHPGSAKQVSNYVLSKASPADREAITASIDEAIRALPLL 178
>gi|313156824|gb|EFR56264.1| aminoacyl-tRNA hydrolase [Alistipes sp. HGB5]
Length = 187
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF +D + + + ++++ + G IL+KP
Sbjct: 3 YLIVGLGNIGAEYAGTRHNIGFNVLDALAEASN-AVFTTARYGDVAQVKHKGRTLILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M K+ EN LV+ DD+ L FGTLRL+ G GHNGLK+I+E
Sbjct: 62 STYMNLSGKAVRYWMEAEKIAP-ENLLVVSDDIALPFGTLRLRPKGSAGGHNGLKNIAEL 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G +N+ R+R G+G H + +VLG +S +R
Sbjct: 121 LGTENFARMRFGVGGDFPKGHQVDYVLGEWSEEDR 155
>gi|213156612|ref|YP_002318273.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AB0057]
gi|226723244|sp|B7I7B5|PTH_ACIB5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|213055772|gb|ACJ40674.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AB0057]
Length = 193
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++++ + KFH G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITIKNDPKFHGISGRGNIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS++ FY++ E L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 MTYMNRSGQSVVPFSKFYQIAP-EAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG S E+ + ID+ + LL + + +
Sbjct: 125 IGPNFHRLRIGIGHPGSKERVSGHVLGKAPSSEQSLMDGAIDHALSKVKLLVQGQVPQAM 184
Query: 182 NHI 184
N I
Sbjct: 185 NQI 187
>gi|320527117|ref|ZP_08028304.1| peptidyl-tRNA hydrolase [Solobacterium moorei F0204]
gi|320132445|gb|EFW24988.1| peptidyl-tRNA hydrolase [Solobacterium moorei F0204]
Length = 193
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 93/158 (58%), Gaps = 4/158 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG EY + RHN GF+ +D++ +K++A ++ +++G + L+K
Sbjct: 1 MKLIAGLGNPGKEYEKTRHNSGFLAVDKLAEKLGTSITSEKWNALVASVRINGEQVTLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ + + FYKL E+ L++HDD+D+ G LR++ G G G+KSI
Sbjct: 61 PLTYMNESGSAVSQAVKFYKL-QPEDILILHDDMDIPVGALRIRKNGSGGGQKGMKSIIN 119
Query: 121 KCGKNY-KRLRIGIG--RPPDTAHIIRHVLGNFSSPER 155
G + R+RIG+G P + A + VL ER
Sbjct: 120 ALGTDQIARVRIGVGHSEPGNHAKVPDWVLSPVPKAER 157
>gi|260893904|ref|YP_003240001.1| peptidyl-tRNA hydrolase [Ammonifex degensii KC4]
gi|260866045|gb|ACX53151.1| peptidyl-tRNA hydrolase [Ammonifex degensii KC4]
Length = 195
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 88/157 (56%), Gaps = 9/157 (5%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
V GLGNPG Y + RHN+GFM +DR+ A + K + ++ +L+ L+KPQ
Sbjct: 9 VVGLGNPGPAYADTRHNLGFMVLDRLARQVGVSFAKEVKLCSRLAVLRLEDREVYLLKPQ 68
Query: 63 TFMNLSGQS---LLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
T+MNLSG++ L+E + E LVI+DDLDL G L+L G GH G+ S+
Sbjct: 69 TYMNLSGEAVKLLVEKKELFP----EEILVIYDDLDLPLGRLKLALSGSSGGHRGMGSVL 124
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
E G + RLR+GIGRPP +VL F+ ER
Sbjct: 125 ESLGTTSVPRLRLGIGRPPAGLDPATYVLSPFAPEER 161
>gi|160944869|ref|ZP_02092096.1| hypothetical protein FAEPRAM212_02385 [Faecalibacterium prausnitzii
M21/2]
gi|158444053|gb|EDP21057.1| hypothetical protein FAEPRAM212_02385 [Faecalibacterium prausnitzii
M21/2]
Length = 206
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 93/156 (59%), Gaps = 4/156 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++++AGLGNP +Y RHN GF +D + K KF +G+++G + +L+K
Sbjct: 20 IWLIAGLGNPEAKYDGTRHNAGFAALDALADKWNISVGKTKFQGLWGQGEVNGHKVVLLK 79
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG S+ + F+K+P ++ LV+ DD+ G LR++ G GHNGLKSI
Sbjct: 80 PLTYMNLSGDSIAPMAGFFKIP-ADHVLVLCDDITQAPGKLRIRPSGSAGGHNGLKSIIA 138
Query: 121 KC-GKNYKRLRIGIGRPPDTAH-IIRHVLGNFSSPE 154
+ G+N+ R+RIGIG P + + VLG F PE
Sbjct: 139 RLGGENFPRIRIGIGAKPHPDYDLAAWVLGKF-PPE 173
>gi|194336257|ref|YP_002018051.1| Aminoacyl-tRNA hydrolase [Pelodictyon phaeoclathratiforme BU-1]
gi|238693418|sp|B4SGM1|PTH_PELPB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|194308734|gb|ACF43434.1| Aminoacyl-tRNA hydrolase [Pelodictyon phaeoclathratiforme BU-1]
Length = 190
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 14/175 (8%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTI 57
M ++ GLGNP Y RHNIGF +++I + +F K A+I+ G + I
Sbjct: 1 MKLIVGLGNPESRYIGTRHNIGFSAVEKIAASFGANFSKGKGKSLEAKITH---RGEQVI 57
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
+IKP T+MNLSG +++ MNFYK+ + L+I DDL+L GT+RL+ G G NGLK
Sbjct: 58 IIKPMTYMNLSGHAVVAAMNFYKIVR-NDILIICDDLNLPSGTIRLRAKGSAGGQNGLKH 116
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTA--HIIRHVLGNFSSPERYFL---LPIIDNIA 166
I E G + + RLRIGI R +T+ VLG FS E+ + LPI + A
Sbjct: 117 IIESLGSEEFARLRIGI-RVDETSLTSFSSFVLGKFSENEKVVMEKILPITSDAA 170
>gi|299135705|ref|ZP_07028889.1| peptidyl-tRNA hydrolase [Acidobacterium sp. MP5ACTX8]
gi|298601829|gb|EFI57983.1| peptidyl-tRNA hydrolase [Acidobacterium sp. MP5ACTX8]
Length = 198
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 105/190 (55%), Gaps = 8/190 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY HN GF+ +DRI ++ A +L G +L K
Sbjct: 1 MKLIVGLGNPGPEYAFTPHNAGFLAVDRIAEICDTQFANRRGRAVTVRTRLAGHDVLLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSG S+ ++N +L +E+ +V++D+L + GTLR++ G GHNG+KSIS
Sbjct: 61 PETFMNLSGLSVAALLNELEL-GVEDLIVLYDELAIPLGTLRIRERGSAGGHNGVKSISG 119
Query: 121 KCG-KNYKRLRIGIGRPP-DTAHIIR-----HVLGNFSSPERYFLLPIIDNIARSLPLLA 173
G + + R+RIG+G+PP +T ++ ++L E L ++D R++ +
Sbjct: 120 VLGTEEWLRVRIGVGKPPLETGREVKAGGTSYLLAPMRKTELAVLDEVLDQAVRAVEAVL 179
Query: 174 KREDVSFLNH 183
+ + +N
Sbjct: 180 TKGVSAAMNE 189
>gi|169634105|ref|YP_001707841.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii SDF]
gi|169796982|ref|YP_001714775.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AYE]
gi|184157105|ref|YP_001845444.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii ACICU]
gi|215484444|ref|YP_002326677.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AB307-0294]
gi|239501214|ref|ZP_04660524.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AB900]
gi|294838726|ref|ZP_06783409.1| peptidyl-tRNA hydrolase [Acinetobacter sp. 6013113]
gi|294842362|ref|ZP_06787045.1| peptidyl-tRNA hydrolase [Acinetobacter sp. 6014059]
gi|294859080|ref|ZP_06796849.1| peptidyl-tRNA hydrolase [Acinetobacter sp. 6013150]
gi|301348150|ref|ZP_07228891.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AB056]
gi|301512835|ref|ZP_07238072.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AB058]
gi|301596893|ref|ZP_07241901.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AB059]
gi|226694244|sp|B0VTX2|PTH_ACIBS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226723243|sp|B7GYR0|PTH_ACIB3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238688122|sp|B0V8G0|PTH_ACIBY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238690973|sp|B2HUM2|PTH_ACIBC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169149909|emb|CAM87803.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AYE]
gi|169152897|emb|CAP01935.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii]
gi|183208699|gb|ACC56097.1| Peptidyl-tRNA hydrolase [Acinetobacter baumannii ACICU]
gi|213986343|gb|ACJ56642.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AB307-0294]
gi|322507004|gb|ADX02458.1| Peptidyl-tRNA hydrolase [Acinetobacter baumannii 1656-2]
gi|323516871|gb|ADX91252.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii TCDC-AB0715]
Length = 193
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++++ + KFH G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS++ FY++ E L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 MTYMNRSGQSVVPFSKFYQIAP-EAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG S E+ + ID+ + LL + + +
Sbjct: 125 IGPNFHRLRIGIGHPGSKERVSGHVLGKAPSSEQSLMDGAIDHALSKVKLLVQGQVPQAM 184
Query: 182 NHI 184
N I
Sbjct: 185 NQI 187
>gi|255318850|ref|ZP_05360076.1| peptidyl-tRNA hydrolase [Acinetobacter radioresistens SK82]
gi|262378892|ref|ZP_06072049.1| peptidyl-tRNA hydrolase [Acinetobacter radioresistens SH164]
gi|255304106|gb|EET83297.1| peptidyl-tRNA hydrolase [Acinetobacter radioresistens SK82]
gi|262300177|gb|EEY88089.1| peptidyl-tRNA hydrolase [Acinetobacter radioresistens SH164]
Length = 193
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 101/183 (55%), Gaps = 2/183 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++R+ + KFH GQ++G L+ P
Sbjct: 6 LIIGLGNPGTEYAQTRHNAGFWFVERLAEQYGITLKNDPKFHGISGRGQIEGQDIRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS++ FY++ ++ LV HD+LD++ G +RLKTGGG GHNGL+ I+
Sbjct: 66 TTFMNRSGQSVVPFAKFYQI-TPQSMLVAHDELDMNPGIIRLKTGGGHGGHNGLRDITPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G ++ RLRIGIG P + HVL E+ + I + + LL E +
Sbjct: 125 TGPDFHRLRIGIGHPGSKERVSGHVLSKAPRSEQELMDDAISHTLSKIKLLVNGEIQQAM 184
Query: 182 NHI 184
N I
Sbjct: 185 NQI 187
>gi|325270438|ref|ZP_08137042.1| aminoacyl-tRNA hydrolase [Prevotella multiformis DSM 16608]
gi|324987234|gb|EGC19213.1| aminoacyl-tRNA hydrolase [Prevotella multiformis DSM 16608]
Length = 209
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 93/173 (53%), Gaps = 5/173 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GFM +D ++ + + I+E + G + IL+KP
Sbjct: 23 YLICGLGNPGQEYEGTRHNTGFMVLDAFAKASNI-VFEDRRYGFIAETAVKGRKVILLKP 81
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + + LV+ DD+ L G RLK G D GHNGL I +
Sbjct: 82 TTFMNLSGNAVRYWLNKEHI-DQRRLLVVSDDVALPAGAFRLKGSGSDGGHNGLGHIQQL 140
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN---IARSLPL 171
G +Y RLR+GIG I VLG+++ + L P +D I RS L
Sbjct: 141 IGSDYARLRMGIGNDYPRGGQIDWVLGHYTDEDLEALRPAVDTAVEIIRSFVL 193
>gi|300806899|emb|CBV36794.1| aminoacyl-tRNA hydrolase [Flavobacterium psychrophilum]
Length = 209
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 87/158 (55%), Gaps = 9/158 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTIL 58
F++ GLGN G EY RHNIGF +D R S F ++E +L G +L
Sbjct: 25 FLIVGLGNIGAEYVNTRHNIGFKVVDFLARQESLDFQTV----KLGSLAECKLKGRTLLL 80
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG+++ M K+ EN LVI DDL+L FGT+R+K G D GHNGLKS+
Sbjct: 81 LKPNTYMNLSGKAVQYWMEKEKIEK-ENVLVITDDLNLSFGTIRIKPKGSDGGHNGLKSV 139
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + Y R R GI + +VLG + E+
Sbjct: 140 QQILNSSEYPRFRFGISDEFKKGKQVDYVLGEWDESEK 177
>gi|327403711|ref|YP_004344549.1| peptidyl-tRNA hydrolase [Fluviicola taffensis DSM 16823]
gi|327319219|gb|AEA43711.1| peptidyl-tRNA hydrolase [Fluviicola taffensis DSM 16823]
Length = 187
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 93/166 (56%), Gaps = 4/166 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E RHNIGF ++ + + + AE++E + G IL+KP
Sbjct: 3 YLFVGLGNPGSKYEETRHNIGFKVLEALAK-ELGGTFTLQKTAEVAEVKFKGRTLILVKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + K+ EN +V+ DDL L FG LR+K G D GHNGLK I
Sbjct: 62 TTYMNLSGKAVNYYLQQEKILK-ENMVVVTDDLALPFGKLRMKGKGSDGGHNGLKDIQAT 120
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
Y RLR G+G + +VLG +S+ ER L I NIA
Sbjct: 121 LNSVEYCRLRFGVGSDFHKGQQVDYVLGEWSAEERETLNERI-NIA 165
>gi|145295093|ref|YP_001137914.1| peptidyl-tRNA hydrolase [Corynebacterium glutamicum R]
gi|140845013|dbj|BAF54012.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 204
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 85/147 (57%), Gaps = 3/147 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG +Y RHN+G+MC D + H + QL + ++
Sbjct: 25 WLVVGLGNPGAKYESTRHNVGYMCQDMLIDAHQQQPLTPATGYKALTTQL-APEVLAVRS 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ + + +P E +VIHD+LDL G +RLK GG + GHNGLKS++E+
Sbjct: 84 TTFMNHSGQGVAPIAAALGIPA-ERIIVIHDELDLPAGKVRLKKGGNENGHNGLKSLTEE 142
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVL 147
G ++Y R+RIGI RPP + +VL
Sbjct: 143 LGTRDYLRVRIGISRPPAGMAVPDYVL 169
>gi|150024340|ref|YP_001295166.1| peptidyl-tRNA hydrolase [Flavobacterium psychrophilum JIP02/86]
gi|149770881|emb|CAL42346.1| Aminoacyl-tRNA hydrolase [Flavobacterium psychrophilum JIP02/86]
Length = 209
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 87/158 (55%), Gaps = 9/158 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTIL 58
F++ GLGN G EY RHNIGF +D R S F ++E +L G +L
Sbjct: 25 FLIVGLGNIGAEYVNTRHNIGFKVVDFLARQESLDFQTV----KLGSLAECKLKGRTLLL 80
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG+++ M K+ EN LVI DDL+L FGT+R+K G D GHNGLKS+
Sbjct: 81 LKPNTYMNLSGKAVQYWMEKEKIEK-ENVLVITDDLNLSFGTIRIKPKGSDGGHNGLKSV 139
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + Y R R GI + +VLG + E+
Sbjct: 140 QQILNSSEYPRFRFGISDEFKKGKQVDYVLGEWDESEK 177
>gi|305681954|ref|ZP_07404758.1| aminoacyl-tRNA hydrolase [Corynebacterium matruchotii ATCC 14266]
gi|305658427|gb|EFM47930.1| aminoacyl-tRNA hydrolase [Corynebacterium matruchotii ATCC 14266]
Length = 194
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 93/153 (60%), Gaps = 19/153 (12%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI------HSFHFFPAWKKKFHAEISEGQLDGLR 55
++V GLGNPG++Y RHN+G+ +DR+ H PA G +
Sbjct: 18 WLVIGLGNPGNQYVATRHNVGYRVVDRLLKDTPLHPIKGIPATAANV------GDM---- 67
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L++ T+MN SG+++ + + + + +L++ +VIHD+LDL GT+R+K GG + GHNGL
Sbjct: 68 -LLVRSTTYMNDSGRAIAPLADAFAM-DLDHIIVIHDELDLPLGTVRIKRGGNENGHNGL 125
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVL 147
KS + + G ++Y R+R+GI RPP ++ +VL
Sbjct: 126 KSATAELGSRDYIRVRVGISRPPQGTPVVDYVL 158
>gi|325286676|ref|YP_004262466.1| peptidyl-tRNA hydrolase [Cellulophaga lytica DSM 7489]
gi|324322130|gb|ADY29595.1| Peptidyl-tRNA hydrolase [Cellulophaga lytica DSM 7489]
Length = 229
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 100/175 (57%), Gaps = 12/175 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTIL 58
F+V GLGN G EY E RHNIGF +D + S F P +K A ++ ++ G +
Sbjct: 45 FLVVGLGNIGTEYTETRHNIGFKILDAFAKKESLTFEP---QKLGA-VTTYKIKGRTILF 100
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P T+MNLSG+++ + K+P LEN LVI DD++L FGT+R+KT G D GHNGLK
Sbjct: 101 LQPSTYMNLSGKAIRYWLEKEKIP-LENLLVITDDINLPFGTIRVKTKGSDGGHNGLKDT 159
Query: 119 SEKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+Y R R G+G + +VLG ++ E+ + + + RS+ L+
Sbjct: 160 QNILQTTSYNRYRFGVGADFGKGRQVDYVLGEWNQEEQE---KMPERLERSIELI 211
>gi|34499511|ref|NP_903726.1| peptidyl-tRNA hydrolase [Chromobacterium violaceum ATCC 12472]
gi|46576721|sp|Q7NQT1|PTH_CHRVO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|34105361|gb|AAQ61716.1| aminoacyl-tRNA hydrolase [Chromobacterium violaceum ATCC 12472]
Length = 193
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 101/172 (58%), Gaps = 7/172 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D + + F W+ KFH +++ Q++G L+K
Sbjct: 6 LIVGLGNPGPEYEKTRHNAGFWLVDEL-CWQFKGNWRSEGKFHGDVARIQIEGQDVWLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSGQ++L + +FYK LP+ LV+HD+LDL G R K GGG GHNGLK I+
Sbjct: 65 PMTYMNLSGQAVLALAHFYKILPD--EILVVHDELDLAPGVARFKQGGGHGGHNGLKDIA 122
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ + RLR+GIG P D + VL + E+ L + R LP
Sbjct: 123 ARLSSPAFWRLRLGIGHPGDKKEVANFVLKKPRAEEQQALDEAVLASLRELP 174
>gi|225023012|ref|ZP_03712204.1| hypothetical protein CORMATOL_03060 [Corynebacterium matruchotii
ATCC 33806]
gi|224944235|gb|EEG25444.1| hypothetical protein CORMATOL_03060 [Corynebacterium matruchotii
ATCC 33806]
Length = 194
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 93/153 (60%), Gaps = 19/153 (12%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI------HSFHFFPAWKKKFHAEISEGQLDGLR 55
++V GLGNPG++Y RHN+G+ +DR+ H PA G +
Sbjct: 18 WLVIGLGNPGNQYVATRHNVGYRVVDRLLKDTPLHPIKGIPATAANV------GDM---- 67
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L++ T+MN SG+++ + + + + +L++ +VIHD+LDL GT+R+K GG + GHNGL
Sbjct: 68 -LLVRSTTYMNDSGRAIAPLADAFAI-DLDHIIVIHDELDLPLGTVRIKRGGNENGHNGL 125
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVL 147
KS + + G ++Y R+R+GI RPP ++ +VL
Sbjct: 126 KSATAELGSRDYIRVRVGISRPPQGTPVVDYVL 158
>gi|313674671|ref|YP_004052667.1| peptidyl-tRNA hydrolase [Marivirga tractuosa DSM 4126]
gi|312941369|gb|ADR20559.1| peptidyl-tRNA hydrolase [Marivirga tractuosa DSM 4126]
Length = 186
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 97/173 (56%), Gaps = 8/173 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH--FFPAWKKKFHAEISEGQLDGLRTILI 59
+++ GLGN G EY RHNIGF+ +DR+ F K AE + G + LI
Sbjct: 3 YLIVGLGNIGAEYEITRHNIGFLTLDRLADQQKVAFETLKLAMKAEF---KYKGRQIHLI 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+++ M K+P EN +VI DD+ L FG LRL+ G AGHNGLK+I
Sbjct: 60 KPTTYMNLSGKAVNYWMQELKIPK-ENIMVITDDIALPFGKLRLRAKGSSAGHNGLKNIE 118
Query: 120 E-KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
+ G+NY RL+ GIG + +VL F+ E + LP I + A + L
Sbjct: 119 DLTGGQNYARLKFGIGDNFHKGQQVDYVLSPFTQQE-FDELPFIMDKACDMVL 170
>gi|15605534|ref|NP_220320.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis D/UW-3/CX]
gi|76789543|ref|YP_328629.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis A/HAR-13]
gi|166154142|ref|YP_001654260.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis 434/Bu]
gi|237803231|ref|YP_002888425.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis B/Jali20/OT]
gi|237805152|ref|YP_002889306.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis B/TZ1A828/OT]
gi|255507418|ref|ZP_05383057.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis D(s)2923]
gi|301335382|ref|ZP_07223626.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis L2tet1]
gi|6831525|sp|O84806|PTH_CHLTR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390924|sp|Q3KKP1|PTH_CHLTA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238687429|sp|B0B927|PTH_CHLT2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|3329266|gb|AAC68395.1| Peptidyl tRNA Hydrolase [Chlamydia trachomatis D/UW-3/CX]
gi|76168073|gb|AAX51081.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis A/HAR-13]
gi|165930130|emb|CAP03614.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis 434/Bu]
gi|231273452|emb|CAX10367.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274465|emb|CAX11260.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis B/Jali20/OT]
gi|296436351|gb|ADH18525.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis G/9768]
gi|296437282|gb|ADH19452.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis G/11222]
gi|296438210|gb|ADH20371.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis G/11074]
gi|297140711|gb|ADH97469.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis G/9301]
gi|297748928|gb|ADI51474.1| Peptidyl-tRNA hydrolase [Chlamydia trachomatis D-EC]
gi|297749808|gb|ADI52486.1| Peptidyl-tRNA hydrolase [Chlamydia trachomatis D-LC]
Length = 179
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 107/177 (60%), Gaps = 8/177 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
+V G+GNPG +Y RHNIGF+ +D + S F A+++ + +A ++ ++ +L+K
Sbjct: 4 LVVGIGNPGRQYVWTRHNIGFLLLDSLAS-RFLGAFREAPRLYASFAKVEISSEAVVLMK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T++NL+G+++L F+ + ++E+ LV+ DD++ +FG +R + G GHNG+K+ ++
Sbjct: 63 PTTYVNLTGKAVLAAKKFFDV-SMEDILVVADDINREFGFVRFRQDCGSGGHNGIKNTTQ 121
Query: 121 KCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIIDN-IARSLPLLA 173
N Y +LR+G+GRP P + +VL +FS E+ L ++ I LP L
Sbjct: 122 ILQSNHYWQLRLGVGRPSYPGAEGVADYVLSSFSLNEKEKLNDFLEKGIEEILPWLG 178
>gi|296439144|gb|ADH21297.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis E/11023]
Length = 179
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 100/158 (63%), Gaps = 7/158 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
+V G+GNPG +Y RHNIGF+ +D + S F A+++ + +A ++ ++ +L+K
Sbjct: 4 LVVGIGNPGRQYVWTRHNIGFLLLDSLAS-RFLGAFREAPRLYASFAKVEISSEAVVLMK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T++NL+G+++L F+ + ++E+ LV+ DD++ +FG +R + G GHNG+K+ ++
Sbjct: 63 PTTYVNLTGKAVLAAKKFFDV-SMEDILVVADDINREFGFVRFRQDCGSGGHNGIKNTTQ 121
Query: 121 KCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPER 155
N Y +LR+G+GRP P + +VL +FS E+
Sbjct: 122 ILQSNHYWQLRLGVGRPSYPGAEGVADYVLSSFSLNEK 159
>gi|39938638|ref|NP_950404.1| peptidyl-tRNA hydrolase [Onion yellows phytoplasma OY-M]
gi|68052967|sp|Q6YR64|PTH_ONYPE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|39721747|dbj|BAD04237.1| peptidyl-tRNA hydrolase [Onion yellows phytoplasma OY-M]
Length = 188
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 89/134 (66%), Gaps = 2/134 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG ++ RHN+GF +D S + + K+ I + + +++LIK
Sbjct: 1 MKLIVGLGNPGTKFVNTRHNVGFAVVDSFLSQNKYQILKEDKTDHIYQINFNHHQSLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+ + +++N Y++ +EN LVI DD+ LD G L+LK GG GHNGL++I +
Sbjct: 61 PQTYMNLSGEVVKKIINKYRIK-IENILVIVDDIYLDEGKLKLKMQGGHGGHNGLRNIID 119
Query: 121 KCG-KNYKRLRIGI 133
+ G K +KRL+IG+
Sbjct: 120 RLGTKQFKRLKIGV 133
>gi|120437822|ref|YP_863508.1| peptidyl-tRNA hydrolase [Gramella forsetii KT0803]
gi|117579972|emb|CAL68441.1| peptidyl-tRNA hydrolase [Gramella forsetii KT0803]
Length = 208
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 87/155 (56%), Gaps = 3/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G +Y RHNIGF +D + +K +++ + G +L+KP
Sbjct: 24 FLIVGLGNIGPKYENTRHNIGFKILDELAREKEVTFETQKL-GDVATFKFKGRTFVLLKP 82
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M K+ NLEN LV+ DDL+L+FGTLRLKT G D GHNGLK I +
Sbjct: 83 STYMNLSGKAVNYWMQKEKI-NLENLLVVTDDLNLNFGTLRLKTKGSDGGHNGLKDIQSQ 141
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
Y R R GI + +VLG + E
Sbjct: 142 LNTTKYNRFRFGISDEFSKGSQVDYVLGEWGDDEE 176
>gi|88800289|ref|ZP_01115856.1| peptidyl-tRNA hydrolase [Reinekea sp. MED297]
gi|88777004|gb|EAR08212.1| peptidyl-tRNA hydrolase [Reinekea sp. MED297]
Length = 215
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 103/190 (54%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN GF +D + F WK K+ A+I+ QL G + L+K
Sbjct: 26 LIVGLGNPGAQYDQTRHNAGFDYVDALAD-RFHGQWKTESKYQADITSIQLAGQKVWLMK 84
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQS+ NF+K+P E LV HD+LD+ G R K GGG GHNGL+ I
Sbjct: 85 PMTFMNRSGQSVGAFANFFKIPANE-ILVAHDELDIPAGNARFKLGGGHGGHNGLRDIIA 143
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ N + RLR+GIG P + + +VL ER L ID S L + +
Sbjct: 144 RLANNKGFYRLRLGIGHPGHASEVTNYVLSKGRPEERISLERAIDAATESTSLAVQGDWA 203
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 204 KAMNTLHSFK 213
>gi|89890033|ref|ZP_01201544.1| peptidyl-tRNA hydrolase [Flavobacteria bacterium BBFL7]
gi|89518306|gb|EAS20962.1| peptidyl-tRNA hydrolase [Flavobacteria bacterium BBFL7]
Length = 211
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 91/168 (54%), Gaps = 3/168 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G +Y E RHNIGF +D I +++ +++ G + L+KP
Sbjct: 27 FLIIGLGNIGDKYTETRHNIGFKVLDEIARIKD-SSFETLTLGDVATITHKGKKITLLKP 85
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ MN +P E LV+ DDL+L FGTLR+K G D GHNGLK K
Sbjct: 86 STYMNLSGKAIKYYMNQESIPK-EQILVVTDDLNLPFGTLRMKAKGTDGGHNGLKDTQIK 144
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
NY RLR GI + +VLG ++ E L ID A +
Sbjct: 145 LNTPNYPRLRFGISDEFSKGRQVDYVLGEWNKDELKALPERIDKAAAA 192
>gi|323700582|ref|ZP_08112494.1| peptidyl-tRNA hydrolase [Desulfovibrio sp. ND132]
gi|323460514|gb|EGB16379.1| peptidyl-tRNA hydrolase [Desulfovibrio desulfuricans ND132]
Length = 205
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 97/183 (53%), Gaps = 15/183 (8%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD---------GL 54
+ GLGNPG EY RHNIGFM +D + +K H E E D G
Sbjct: 7 IVGLGNPGPEYANTRHNIGFMLVDHLLQL---AGERKSMHLEKIEESGDYDLWQCKFAGA 63
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
+L KP T+MNLSG+++ + + + + +V+HD+LDL G ++ K GG D GHNG
Sbjct: 64 FRLLAKPLTYMNLSGKAVARICGRHAI-EPGDLVVVHDELDLPVGRMKFKRGGSDNGHNG 122
Query: 115 LKSISEKCGK-NYKRLRIGIGRPPDTAHIIRH-VLGNFSSPERYFLLPIIDNIARSLPLL 172
LKSI E+ G ++ RLR+GIGRP D I VL F L II + A+ L +
Sbjct: 123 LKSIQERLGTPDFHRLRLGIGRPADQYKPIPDWVLEPFDPQSAAHLPEIIAHAAKGLDIF 182
Query: 173 AKR 175
+R
Sbjct: 183 FRR 185
>gi|270290198|ref|ZP_06196424.1| peptidyl-tRNA hydrolase [Pediococcus acidilactici 7_4]
gi|270281735|gb|EFA27567.1| peptidyl-tRNA hydrolase [Pediococcus acidilactici 7_4]
Length = 185
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 95/156 (60%), Gaps = 3/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY + RHN GFM +D + + +K A + E +G + +L+K
Sbjct: 1 MKMIVGLGNIGKEYDQTRHNTGFMVVDALAKKYGVDHFKIHHEAMVGEFFSNGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M++Y L L + +V++DD+D+ G +RL+ G GHNG+KS+
Sbjct: 61 PTTYMNDSGRAVRPLMDYYDLA-LTDLIVVYDDMDMPVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + ++RLR+GI P ++ +VLG F+ ++
Sbjct: 120 HLGTEKFRRLRVGIEHPAHQK-VVDYVLGRFTKEQK 154
>gi|221195080|ref|ZP_03568136.1| peptidyl-tRNA hydrolase [Atopobium rimae ATCC 49626]
gi|221184983|gb|EEE17374.1| peptidyl-tRNA hydrolase [Atopobium rimae ATCC 49626]
Length = 222
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEIS-----EGQLDGLRTI 57
++ GLGNPG +Y RHNIGF ID + + WK + ++ + +
Sbjct: 29 LICGLGNPGEKYAHTRHNIGFAVIDALARRYDVRYWKSEAGCLVTTIIVTDADAQRQEVL 88
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KPQ FMN SG L ++ ++ + N LV+HD++DL G++R + GGG HNGL+S
Sbjct: 89 LAKPQDFMNTSGGPLSKLAQARRI-SPANILVVHDEVDLAAGSIRTRAGGGLNAHNGLRS 147
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVL 147
I++K G +++ RL+ GIGRPP ++ +VL
Sbjct: 148 IADKFGTRDFMRLQCGIGRPPGRMKVVDYVL 178
>gi|46576752|sp|Q7VUH3|PTH_BORPE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 215
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 82/136 (60%), Gaps = 3/136 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GF D + A +K F +++ + G +L+KP
Sbjct: 24 LIVGLGNPGPDYETTRHNAGFWLADHLADDLRTAFALEKGFFGMLAKARHAGENVVLLKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ V FYKL E LV+HD+LDL G +++K GGG AGHNGLK I
Sbjct: 84 ITYMNRSGQSVGAVACFYKLAP-EQVLVLHDELDLLPGQVKIKQGGGHAGHNGLKDIQAA 142
Query: 122 CGK-NYKRLRIGIGRP 136
G N+ RLRIGIG P
Sbjct: 143 LGSPNFWRLRIGIGHP 158
>gi|300857301|ref|YP_003782285.1| peptidyl-tRNA hydrolase [Clostridium ljungdahlii DSM 13528]
gi|300437416|gb|ADK17183.1| peptidyl-tRNA hydrolase [Clostridium ljungdahlii DSM 13528]
Length = 191
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 105/173 (60%), Gaps = 4/173 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGN G +Y RHNIGF +D I S + P ++KF EG + + +L+K
Sbjct: 1 MFLIVGLGNIGTKYQHTRHNIGFDAVDLISSKYNIPINREKFKGTYGEGIIADNKVMLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NF+K+ + ++ +DD+DL+ G +R++ G GHNG+KS+
Sbjct: 61 PSTYMNLSGESVIEAANFFKIKSSNIIII-YDDIDLEIGRIRIRKHGSAGGHNGIKSVIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + + R+++GIG+P ++ HVLG F ER + +++ A L L
Sbjct: 120 NLGTDVFPRIKVGIGQPK--GDLVSHVLGKFDINERNDIEKVLETSADVLECL 170
>gi|166155017|ref|YP_001653272.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|238687448|sp|B0BAQ6|PTH_CHLTB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|165931005|emb|CAP06568.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis L2b/UCH-1/proctitis]
Length = 179
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 100/158 (63%), Gaps = 7/158 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
+V G+GNPG +Y RHNIGF+ +D + S F A+++ + +A ++ ++ +L+K
Sbjct: 4 LVVGIGNPGRQYVWTRHNIGFLLLDSLAS-RFLGAFREAPRLYASFAKVEISSEAVVLMK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T++NL+G+++L F+ + ++E+ LV+ DD++ +FG +R + G GHNG+K+ ++
Sbjct: 63 PTTYVNLTGKAVLAAKKFFDV-SMEDILVVADDINREFGFVRFRQDCGSGGHNGIKNTTQ 121
Query: 121 KCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPER 155
N Y +LR+G+GRP P + +VL +FS E+
Sbjct: 122 ILQSNHYWQLRLGVGRPSYPGAEGVADYVLSSFSLNEK 159
>gi|260555726|ref|ZP_05827946.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii ATCC 19606]
gi|260410637|gb|EEX03935.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii ATCC 19606]
Length = 193
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++++ + KFH G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS++ FY++ E L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 MTYMNRSGQSVVPFSKFYQIAP-EAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG S E+ + ID+ + LL + + +
Sbjct: 125 IGPNFHRLRIGIGHPGSKERVSGHVLGKAPSNEQSLMDGAIDHALSKVKLLVQGQVPQAM 184
Query: 182 NHI 184
N I
Sbjct: 185 NQI 187
>gi|23015981|ref|ZP_00055743.1| COG0193: Peptidyl-tRNA hydrolase [Magnetospirillum magnetotacticum
MS-1]
Length = 189
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 95/139 (68%), Gaps = 1/139 (0%)
Query: 46 ISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKT 105
++EG ++G + I +KPQT+MNLSGQS+ F K+P +++ +V+HD+LD+ G L++K
Sbjct: 1 MAEGVIEGRKVIALKPQTYMNLSGQSVAAASRFLKVP-VDDIVVLHDELDIAPGRLKVKR 59
Query: 106 GGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
GGG GHNGLKSI G+NY+R+R+GIG P D + +VL +F+ + +L+P++D +
Sbjct: 60 GGGAGGHNGLKSIDSHLGQNYRRVRMGIGHPGDRDLVSGYVLHDFAKADEAWLIPVLDAV 119
Query: 166 ARSLPLLAKREDVSFLNHI 184
A + P+L +D F+ +
Sbjct: 120 ADTFPMLVSGDDTGFMTRV 138
>gi|255349200|ref|ZP_05381207.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis 70]
gi|255503737|ref|ZP_05382127.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis 70s]
Length = 179
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 107/177 (60%), Gaps = 8/177 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
+V G+GNPG +Y RHN+GF+ +D + S F A+++ + +A ++ ++ +L+K
Sbjct: 4 LVVGIGNPGRQYVWTRHNVGFLLLDSLAS-RFLGAFREAPRLYASFAKVEISSEAVVLMK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T++NL+G+++L F+ + ++E+ LV+ DD++ +FG +R + G GHNG+K+ ++
Sbjct: 63 PTTYVNLTGKAVLAAKKFFDV-SMEDILVVADDINREFGFVRFRQDCGSGGHNGIKNTTQ 121
Query: 121 KCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIIDN-IARSLPLLA 173
N Y +LR+G+GRP P + +VL +FS E+ L ++ I LP L
Sbjct: 122 ILQSNHYWQLRLGVGRPSYPGAEGVADYVLSSFSLNEKEKLNDFLEKGIEEILPWLG 178
>gi|227544686|ref|ZP_03974735.1| peptidyl-tRNA hydrolase [Lactobacillus reuteri CF48-3A]
gi|300909072|ref|ZP_07126535.1| aminoacyl-tRNA hydrolase [Lactobacillus reuteri SD2112]
gi|227185332|gb|EEI65403.1| peptidyl-tRNA hydrolase [Lactobacillus reuteri CF48-3A]
gi|300894479|gb|EFK87837.1| aminoacyl-tRNA hydrolase [Lactobacillus reuteri SD2112]
Length = 205
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 95/157 (60%), Gaps = 4/157 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM +D++ +H K A G ++G + +L+
Sbjct: 20 MKMIVGLGNIGTRYDETRHNTGFMVVDQLARDYHLGAFTHLKQEAVAVSGVINGEKVMLV 79
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ ++++Y + + ++++DDLD+ G +RLKT G GHNGLKSI
Sbjct: 80 KPTTFMNDSGRAVGPLVDYYDIDLDD-LVIVNDDLDMPVGKVRLKTHGASGGHNGLKSII 138
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G KN+ R+++GI P ++ HVLG FS ER
Sbjct: 139 SALGTKNFNRVKVGIDHPQHGT-VVSHVLGKFSKEER 174
>gi|313680823|ref|YP_004058562.1| peptidyl-tRNA hydrolase [Oceanithermus profundus DSM 14977]
gi|313153538|gb|ADR37389.1| peptidyl-tRNA hydrolase [Oceanithermus profundus DSM 14977]
Length = 219
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F+V GLGNPG Y E RHN+GF +DRI AWK++ A + L+KP
Sbjct: 32 FLVVGLGNPGPRYAETRHNLGFWVVDRIAREERL-AWKQQGRAFTTRWG----SGWLMKP 86
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ + +YK+ E LV+HDD+DL G LRL+ GG G G++SI E+
Sbjct: 87 TTFMNASGEAVAPFVRYYKIAP-ERLLVVHDDMDLPLGRLRLRRGGSAGGQKGVRSIIEQ 145
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + + RLR+GIGRPP VL FS ER
Sbjct: 146 LGTDRFDRLRLGIGRPPAGWDAASWVLSKFSPDER 180
>gi|297243628|ref|ZP_06927559.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis AMD]
gi|296888379|gb|EFH27120.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis AMD]
Length = 199
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 96/163 (58%), Gaps = 10/163 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG--QLDG--LRTI 57
+++AGLGNPG +Y RHN+GFM D + K A++ +G LDG +
Sbjct: 6 WLIAGLGNPGTKYEGTRHNMGFMVADVLAQRWSVSLSDHKGLAKLGKGVMNLDGRVAKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP TFMN SG ++ + ++Y++ ++ ++IHDD+DLDFG +++K GG GHNG++S
Sbjct: 66 LAKPLTFMNDSGAAVSSISSYYQIEP-DHIVIIHDDMDLDFGRIKVKAGGSAGGHNGIRS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDTAH----IIRHVLGNFSSPER 155
I G Y R+R+G+G AH + VLG F++ ++
Sbjct: 125 IDRSLGTPQYSRVRMGVGHAQRGAHAHDNTVNWVLGGFAAVQK 167
>gi|258654662|ref|YP_003203818.1| peptidyl-tRNA hydrolase [Nakamurella multipartita DSM 44233]
gi|258557887|gb|ACV80829.1| peptidyl-tRNA hydrolase [Nakamurella multipartita DSM 44233]
Length = 195
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 107/176 (60%), Gaps = 4/176 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
F+V GLGNPG +Y NRHN+G M D + + +K K A++ EG+L R IL K
Sbjct: 10 FLVVGLGNPGKQYAGNRHNVGAMVAD-VLAGRLGAGFKSHKAGADVVEGRLGARRVILAK 68
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+++MNLSG + + F+ + + +HD+LDL T+R+K GGG+ GHNGL+SIS
Sbjct: 69 PRSYMNLSGGATAALAKFFSVVP-ARVIAVHDELDLPPSTIRVKQGGGEGGHNGLRSISA 127
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G K+Y R+R GIGRPP VL +FS+ ER L +++ A ++ LL ++
Sbjct: 128 SLGTKDYLRVRFGIGRPPGRMDPADFVLRDFSAAERKDLGVDLEHAADAVELLVEQ 183
>gi|33594044|ref|NP_881688.1| peptidyl-tRNA hydrolase [Bordetella pertussis Tohama I]
gi|33564118|emb|CAE43390.1| peptidyl-tRNA hydrolase [Bordetella pertussis Tohama I]
Length = 198
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 82/136 (60%), Gaps = 3/136 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GF D + A +K F +++ + G +L+KP
Sbjct: 7 LIVGLGNPGPDYETTRHNAGFWLADHLADDLRTAFALEKGFFGMLAKARHAGENVVLLKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ V FYKL E LV+HD+LDL G +++K GGG AGHNGLK I
Sbjct: 67 ITYMNRSGQSVGAVACFYKLAP-EQVLVLHDELDLLPGQVKIKQGGGHAGHNGLKDIQAA 125
Query: 122 CGK-NYKRLRIGIGRP 136
G N+ RLRIGIG P
Sbjct: 126 LGSPNFWRLRIGIGHP 141
>gi|227363647|ref|ZP_03847761.1| peptidyl-tRNA hydrolase [Lactobacillus reuteri MM2-3]
gi|325681842|ref|ZP_08161361.1| aminoacyl-tRNA hydrolase [Lactobacillus reuteri MM4-1A]
gi|227071316|gb|EEI09625.1| peptidyl-tRNA hydrolase [Lactobacillus reuteri MM2-3]
gi|324978933|gb|EGC15881.1| aminoacyl-tRNA hydrolase [Lactobacillus reuteri MM4-1A]
Length = 205
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 103/183 (56%), Gaps = 4/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM +D++ +H K A G ++G + +L+
Sbjct: 20 MKMIVGLGNIGTRYDETRHNTGFMVVDQLARDYHLGAFTHLKQEAVAVSGVINGEKVMLV 79
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ ++++Y + + ++++DDLD+ G +RLKT G GHNGLKSI
Sbjct: 80 KPTTFMNDSGRAVGPLVDYYDIDLDD-LVIVNDDLDMPVGKVRLKTHGASGGHNGLKSII 138
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G KN+ R+++GI P ++ HVLG FS ER ++ +L ED
Sbjct: 139 SVLGTKNFNRVKVGIDHPQHGT-VVSHVLGKFSKEERPKFDQAVEQAEHALEDWINGEDF 197
Query: 179 SFL 181
+ L
Sbjct: 198 AKL 200
>gi|163783323|ref|ZP_02178316.1| peptidyl-tRNA hydrolase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881431|gb|EDP74942.1| peptidyl-tRNA hydrolase [Hydrogenivirga sp. 128-5-R1-1]
Length = 192
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 92/167 (55%), Gaps = 6/167 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+V GLGNPG EY RHN+GFM ID + +++ + + ++ G +L KPQ
Sbjct: 4 LVVGLGNPGKEYENTRHNVGFMVIDELVRRLKLKHHREEGLSHVYRTKIAGREVLLAKPQ 63
Query: 63 TFMNLSGQSLLEVMNFYKLPNLE--NYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
T+MN SG L V+N + +E LVI+DDLDL G RL+ G GH G++SI +
Sbjct: 64 TYMNNSG---LAVVNLLEDNGIEPREMLVIYDDLDLPLGVTRLRLEGSSGGHRGVESIVK 120
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
+ + RL+IGIGRP + ++ +VL FS E + +I A
Sbjct: 121 NIKTEKFPRLKIGIGRPKNKRDVVNYVLSPFSKEEEEVVRAVIKKAA 167
>gi|194467673|ref|ZP_03073660.1| Aminoacyl-tRNA hydrolase [Lactobacillus reuteri 100-23]
gi|194454709|gb|EDX43606.1| Aminoacyl-tRNA hydrolase [Lactobacillus reuteri 100-23]
Length = 186
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 106/183 (57%), Gaps = 4/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM +D++ +H K A G ++G + +L+
Sbjct: 1 MKMIVGLGNIGTRYDETRHNTGFMVVDQLARDYHLGAFTHLKQEAVAVSGVINGEKVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ ++++Y + +L++ ++++DDLD+ G +RLKT G GHNGLKSI
Sbjct: 61 KPTTFMNDSGRAVGPLVDYYDI-DLDDLVIVNDDLDMPVGKVRLKTHGASGGHNGLKSII 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G KN+ R+++GI P ++ HVLG FS ER ++ +L ED
Sbjct: 120 SVLGTKNFNRVKVGIDHPQHGT-VVSHVLGKFSKEERPKFDQAVEQAEHALEDWINGEDF 178
Query: 179 SFL 181
+ L
Sbjct: 179 AKL 181
>gi|260436438|ref|ZP_05790408.1| peptidyl-tRNA hydrolase [Synechococcus sp. WH 8109]
gi|260414312|gb|EEX07608.1| peptidyl-tRNA hydrolase [Synechococcus sp. WH 8109]
Length = 205
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 96/170 (56%), Gaps = 8/170 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHNIGFM ++ + F + K H ++ + R L+ P
Sbjct: 7 LVVGLGNPGAKYAGTRHNIGFMALELLGERSGFSFRHQAKLHGLAADTGVGEQRLRLLMP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+++ ++++ L LV+ DD+DL G LRL+ G GHNGL+S +
Sbjct: 67 QTYMNDSGRAIRAALDWFGL-EPHQLLVLVDDMDLPLGRLRLRAQGSAGGHNGLRSTIQH 125
Query: 122 CG-KNYKRLRIGIGRPPDT-----AHIIRHVLGNFSSPERYFLLPIIDNI 165
G + + RLRIGIG P + A + HVLG+FS E+ + ++D +
Sbjct: 126 LGTQAFPRLRIGIGAPAENPAERRARTVSHVLGSFSKAEQPCVGAVLDAV 175
>gi|325962654|ref|YP_004240560.1| peptidyl-tRNA hydrolase [Arthrobacter phenanthrenivorans Sphe3]
gi|323468741|gb|ADX72426.1| peptidyl-tRNA hydrolase [Arthrobacter phenanthrenivorans Sphe3]
Length = 196
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 107/174 (61%), Gaps = 4/174 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTILI 59
+++ GLGNPG +Y NRHN+G M +D + + K A++ EG+L G R +L
Sbjct: 5 WLIVGLGNPGAQYQGNRHNVGQMVLDELAARMGAGFKSHKARAQVLEGRLGIGGPRVVLA 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN+SG + + NFY + + + + +HD++D+ F T++LK GGG+ GHNGL+ IS
Sbjct: 65 KPMTYMNVSGGPVAALANFYGI-SPDRVVAVHDEIDIPFNTVKLKLGGGEGGHNGLRDIS 123
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ K+Y R+R+G+GRPP +VL NF S E L ++D A ++ +L
Sbjct: 124 KTLATKDYLRVRVGVGRPPGRMDTADYVLRNFGSAELKELPFLLDEAADAVEVL 177
>gi|148543498|ref|YP_001270868.1| peptidyl-tRNA hydrolase [Lactobacillus reuteri DSM 20016]
gi|184152906|ref|YP_001841247.1| peptidyl-tRNA hydrolase [Lactobacillus reuteri JCM 1112]
gi|167011995|sp|A5VI57|PTH_LACRD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|229485508|sp|B2G5N5|PTH_LACRJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148530532|gb|ABQ82531.1| peptidyl-tRNA hydrolase [Lactobacillus reuteri DSM 20016]
gi|183224250|dbj|BAG24767.1| aminoacyl-tRNA hydrolase [Lactobacillus reuteri JCM 1112]
Length = 186
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 106/183 (57%), Gaps = 4/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM +D++ +H K A G ++G + +L+
Sbjct: 1 MKMIVGLGNIGTRYDETRHNTGFMVVDQLARDYHLGAFTHLKQEAVAVSGVINGEKVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ ++++Y + +L++ ++++DDLD+ G +RLKT G GHNGLKSI
Sbjct: 61 KPTTFMNDSGRAVGPLVDYYDI-DLDDLVIVNDDLDMPVGKVRLKTHGASGGHNGLKSII 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G KN+ R+++GI P ++ HVLG FS ER ++ +L ED
Sbjct: 120 SVLGTKNFNRVKVGIDHPQHGT-VVSHVLGKFSKEERPKFDQAVEQAEHALEDWINGEDF 178
Query: 179 SFL 181
+ L
Sbjct: 179 AKL 181
>gi|312129855|ref|YP_003997195.1| peptidyl-tRNA hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906401|gb|ADQ16842.1| peptidyl-tRNA hydrolase [Leadbetterella byssophila DSM 17132]
Length = 186
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 91/163 (55%), Gaps = 3/163 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHN GF+ +DR+ + + + HA ++E + LIKP
Sbjct: 3 YLIVGLGNIGPEYVLTRHNAGFIVLDRM-AIDRGLKFTLQRHALVTEFSFKSHQITLIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG++L MN K+ E LV+ DDL L G LR+K G AGHNGLK+I +
Sbjct: 62 TTYMNLSGKALAYWMNQLKITP-EQVLVLVDDLALPLGKLRMKEKGSSAGHNGLKNIQQI 120
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+ Y RLRIGIG + VLG F+ E L P ID
Sbjct: 121 LNTDQYPRLRIGIGDDFPKGRQVDFVLGKFTEDELITLSPKID 163
>gi|13357634|ref|NP_077908.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|167971017|ref|ZP_02553294.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 6 str. ATCC
27818]
gi|168282151|ref|ZP_02689818.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|168308309|ref|ZP_02690984.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|170762127|ref|YP_001752157.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|14195087|sp|Q9PR67|PTH_UREPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038172|sp|B1AI63|PTH_UREP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|11279559|pir||B82937 peptidyl-tRNA hydrolase UU078 [imported] - Ureaplasma urealyticum
gi|6899029|gb|AAF30483.1|AE002107_7 peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|168827704|gb|ACA32966.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|171902841|gb|EDT49130.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|182675955|gb|EDT87860.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|186700816|gb|EDU19098.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 6 str. ATCC
27818]
Length = 186
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 99/173 (57%), Gaps = 5/173 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG Y + RHN+GFM I+ I + KF+ ++ + +P
Sbjct: 4 YLIVGLGNPGSNYAKTRHNVGFMVINEICNKLNLSLDSSKFNGIFTKTIYNNSIVFFCQP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+ +++++NFY +P ++N +VI+DD+D GT++L+ G G NG+K+I
Sbjct: 64 TTYMNLSGEFVIKMLNFYNIP-IKNLIVIYDDVDTKLGTIKLRKKGSSGGQNGIKNIINI 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
+ KR+RIGI + P + ++VL NF E + P I I +L LA
Sbjct: 123 LKTDEIKRIRIGIDKDPHI-KLDQYVLSNFKIDELVIIKPAI--IKGALATLA 172
>gi|53724086|ref|YP_104606.1| peptidyl-tRNA hydrolase [Burkholderia mallei ATCC 23344]
gi|67643440|ref|ZP_00442186.1| aminoacyl-tRNA hydrolase [Burkholderia mallei GB8 horse 4]
gi|121601224|ref|YP_991441.1| peptidyl-tRNA hydrolase [Burkholderia mallei SAVP1]
gi|167001047|ref|ZP_02266848.1| aminoacyl-tRNA hydrolase [Burkholderia mallei PRL-20]
gi|254174688|ref|ZP_04881349.1| peptidyl-tRNA hydrolase [Burkholderia mallei ATCC 10399]
gi|254201693|ref|ZP_04908057.1| peptidyl-tRNA hydrolase [Burkholderia mallei FMH]
gi|254207027|ref|ZP_04913378.1| peptidyl-tRNA hydrolase [Burkholderia mallei JHU]
gi|68052910|sp|Q62FC1|PTH_BURMA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199315|sp|A1UZN8|PTH_BURMS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|52427509|gb|AAU48102.1| peptidyl-tRNA hydrolase [Burkholderia mallei ATCC 23344]
gi|121230034|gb|ABM52552.1| peptidyl-tRNA hydrolase [Burkholderia mallei SAVP1]
gi|147747587|gb|EDK54663.1| peptidyl-tRNA hydrolase [Burkholderia mallei FMH]
gi|147752569|gb|EDK59635.1| peptidyl-tRNA hydrolase [Burkholderia mallei JHU]
gi|160695733|gb|EDP85703.1| peptidyl-tRNA hydrolase [Burkholderia mallei ATCC 10399]
gi|238524792|gb|EEP88223.1| aminoacyl-tRNA hydrolase [Burkholderia mallei GB8 horse 4]
gi|243063118|gb|EES45304.1| aminoacyl-tRNA hydrolase [Burkholderia mallei PRL-20]
Length = 201
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 84/138 (60%), Gaps = 3/138 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLFGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SGQ+++ + +F+K+ E LV HD+LDL G +LK G G GHNGLK IS
Sbjct: 64 QTYMNRSGQAVVALAHFFKILPTE-ILVAHDELDLPPGAAKLKLGSGSGGHNGLKDISAH 122
Query: 122 -CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 123 LSSQQYWRLRIGIGHPRD 140
>gi|289525845|emb|CBJ15326.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis Sweden2]
gi|296435427|gb|ADH17605.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis E/150]
Length = 179
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 107/177 (60%), Gaps = 8/177 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
+V G+GNPG +Y RHNIGF+ +D + S F A+++ + +A ++ ++ +L+K
Sbjct: 4 LVVGIGNPGRQYVWTRHNIGFLLLDSLAS-RFLGAFREAPRLYASFAKVEISSEAVVLMK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T++NL+G+++L F+ + ++E+ LV+ DD++ +FG +R + G GHNG+K+ ++
Sbjct: 63 PTTYVNLTGKAVLASKKFFDV-SMEDILVVADDINREFGFVRFRQDCGSGGHNGIKNTTQ 121
Query: 121 KCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIIDN-IARSLPLLA 173
N Y +LR+G+GRP P + +VL +FS E+ L ++ I LP L
Sbjct: 122 ILQSNHYWQLRLGVGRPSYPGAEGVADYVLSSFSLNEKEKLNDFLEKGIEEILPWLG 178
>gi|237785152|ref|YP_002905857.1| Peptidyl-tRNA hydrolase [Corynebacterium kroppenstedtii DSM 44385]
gi|237758064|gb|ACR17314.1| Peptidyl-tRNA hydrolase [Corynebacterium kroppenstedtii DSM 44385]
Length = 222
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 110/185 (59%), Gaps = 13/185 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-----AWKKKFHAEISEGQLDG--- 53
F+V GLGNPG +Y RHNIG M +D + S P + KK + + +E L G
Sbjct: 28 FLVIGLGNPGSQYEGTRHNIGQMALDEVAS-RALPVPVTLSTHKKTNTDSAEMSLSGPNG 86
Query: 54 --LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG 111
+ IL +P+++MNLSG + F+ + + +N +V+HDDLDLDFGT+RLK GGG+ G
Sbjct: 87 SSVSLILGRPRSYMNLSGGPTSALARFFHI-SPQNVIVLHDDLDLDFGTVRLKRGGGEGG 145
Query: 112 HNGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
HNGL+ I++ G K+Y R+R+GIGRPP VL FS+ E + + A ++
Sbjct: 146 HNGLRDITKALGTKDYLRVRLGIGRPPGRMSPADFVLKKFSTRESVDVDLMCSTAADAVE 205
Query: 171 LLAKR 175
LLA R
Sbjct: 206 LLATR 210
>gi|289704879|ref|ZP_06501296.1| aminoacyl-tRNA hydrolase [Micrococcus luteus SK58]
gi|289558375|gb|EFD51649.1| aminoacyl-tRNA hydrolase [Micrococcus luteus SK58]
Length = 191
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 103/170 (60%), Gaps = 4/170 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTILIK 60
++ GLGNPG EY RHN+G M D + S + + A ++ G+L G R +L K
Sbjct: 7 LIVGLGNPGSEYERTRHNVGQMVADELASRMGVGFTRHRAGAVVATGRLGIGGPRVVLAK 66
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
+MN+SG+ + + +FY + E+ +V+HD+LD+ F TLRLK GGG+ GHNGLKSI+
Sbjct: 67 STGYMNVSGRPVSALASFYGI-GPEDLVVVHDELDIPFDTLRLKRGGGEGGHNGLKSITA 125
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G K+Y R+R+GIGRPP + VL F+ PE+ L +D A ++
Sbjct: 126 SLGTKDYARVRVGIGRPPGRMDVADFVLRPFTKPEQDVLPLHVDRAADAV 175
>gi|303327049|ref|ZP_07357491.1| aminoacyl-tRNA hydrolase [Desulfovibrio sp. 3_1_syn3]
gi|302863037|gb|EFL85969.1| aminoacyl-tRNA hydrolase [Desulfovibrio sp. 3_1_syn3]
Length = 205
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 87/154 (56%), Gaps = 9/154 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-----FFPAWKKKFHAEISEGQLDGLRTI 57
++ GLGNPG Y RHN GF + + KF E+ +L L
Sbjct: 6 VLVGLGNPGPRYEGTRHNCGFALVSALLELADKEGGLSSLNGGKFSCELWRVRLSQLNGT 65
Query: 58 LIK--PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+ PQTFMNLSGQ + ++ ++KL E +V HD+LD+ G LR K GGG+AGHNGL
Sbjct: 66 WLAAMPQTFMNLSGQCVQPLLVWHKL-KPEQLVVAHDELDIPAGELRFKRGGGNAGHNGL 124
Query: 116 KSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLG 148
KSI+E G ++ RLR+GIGRPP +I VLG
Sbjct: 125 KSITELLGTPDFYRLRLGIGRPPHKGDVINWVLG 158
>gi|21230348|ref|NP_636265.1| peptidyl-tRNA hydrolase [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|24418602|sp|Q8PC61|PTH_XANCP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|21111901|gb|AAM40189.1| peptidyl tRNA hydrolase [Xanthomonas campestris pv. campestris str.
ATCC 33913]
Length = 193
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 91/172 (52%), Gaps = 5/172 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW--KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ + RHN GF +D + + W K E ++ ++ G L+K
Sbjct: 6 LIVGLGNPGPEHAQTRHNAGFRFVDAL-AERTGARWGLDSKLFGETAKAEIAGHTVWLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + F+K+ E LV HD+LDL GT RLK GG G NGL+
Sbjct: 65 PATFMNLSGKSITAALRFWKI-EPEQLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIR 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G + RLR+GIG P ++ VLG + + +D +LPL
Sbjct: 124 LLGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGRDDDMAIGEAVDAAIDALPL 175
>gi|283780444|ref|YP_003371199.1| peptidyl-tRNA hydrolase [Pirellula staleyi DSM 6068]
gi|283438897|gb|ADB17339.1| peptidyl-tRNA hydrolase [Pirellula staleyi DSM 6068]
Length = 189
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 84/156 (53%), Gaps = 2/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y RHN+GF + + A +++F +S+G L + +L+K
Sbjct: 1 MKLIVGLGNPGSRYQGTRHNVGFEVVSIVARRVQATAEREQFSGLVSQGNLGPEKMLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN+SG S+L +FYK+ + L+I DD L G LR + G G GL +
Sbjct: 61 PTTFMNVSGSSVLAARDFYKIET-ADILIICDDFALPLGKLRFRAKGSSGGQKGLDDVIR 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ G + RLR+GIG PP + VL F+ E+
Sbjct: 120 RLGTDAVPRLRVGIGAPPSGWDVANFVLSRFNKDEQ 155
>gi|82544342|ref|YP_408289.1| peptidyl-tRNA hydrolase [Shigella boydii Sb227]
gi|119391006|sp|Q31ZP7|PTH_SHIBS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|81245753|gb|ABB66461.1| peptidyl-tRNA hydrolase [Shigella boydii Sb227]
Length = 194
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 89/168 (52%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K G GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLAGAHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 171
>gi|189346690|ref|YP_001943219.1| peptidyl-tRNA hydrolase [Chlorobium limicola DSM 245]
gi|238692149|sp|B3ECG5|PTH_CHLL2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189340837|gb|ACD90240.1| Aminoacyl-tRNA hydrolase [Chlorobium limicola DSM 245]
Length = 190
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHF-FPAWKKKFHAEISEGQLDGLRTIL 58
M +V GLGNP +Y RHN+GF IDR+ SF F A K K+H ++ +L
Sbjct: 1 MKLVIGLGNPESKYSGTRHNVGFDVIDRLSESFQIPFTAGKGKYH--FAKINWRNTAIVL 58
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG +++ MNFYK+ ++ LVI DDL+L GTLRL+ G G NGLK I
Sbjct: 59 LKPMTYMNLSGHAVVAAMNFYKIQR-QDILVICDDLNLPSGTLRLRAKGSAGGQNGLKHI 117
Query: 119 SEKCGKN-YKRLRIGIGRPPDT--AHIIRHVLGNFSSPERYFL---LPIIDNIA 166
E G + + R+R+GI R D + VLG FS E+ + LP+ + A
Sbjct: 118 IECLGNDEFARMRVGI-RLEDQPLSSFSSFVLGKFSEDEKKTMEKILPVCADAA 170
>gi|225435751|ref|XP_002283606.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297746470|emb|CBI16526.3| unnamed protein product [Vitis vinifera]
Length = 217
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 84/156 (53%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GF I+ P A +G +D + L KP
Sbjct: 18 WLFVGLGNPGDKYKGTRHNVGFEMINAFAESQGIPMDTVHCKAIFGQGFVDAVPVFLAKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QT+MNLSG+S + +YKLP L +V HDD+ L G LRL GG HNGLKS+
Sbjct: 78 QTYMNLSGESAGPLAAYYKLP-LNRVVVFHDDMSLPCGVLRLHHKGGHGNHNGLKSVIYH 136
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + + RLRIGIG+PP +L FS+ R
Sbjct: 137 FRGNREFPRLRIGIGKPPGQMDPKAFLLQKFSATAR 172
>gi|302036154|ref|YP_003796476.1| aminoacyl-tRNA hydrolase [Candidatus Nitrospira defluvii]
gi|300604218|emb|CBK40550.1| Aminoacyl-tRNA hydrolase [Candidatus Nitrospira defluvii]
Length = 196
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 96/184 (52%), Gaps = 3/184 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHNIG I+R + + +K A+ G+ L
Sbjct: 1 MRLLVGLGNPGADYADTRHNIGCWVIERAAA-RWSIRLARKGAAQRGSGRAGSKLVELAS 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
+MNLSG L ++ L E +V+HDDLDL+ G LR++ GG GHNG+KS+ E
Sbjct: 60 TLDWMNLSGPPLKGLLRELGL-TPEALVVVHDDLDLEPGRLRIRQDGGSGGHNGIKSVIE 118
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IG+GRP +VL S+ ER P ++ +L LL R+ +
Sbjct: 119 ALGTPQFVRLKIGVGRPAPRQDSADYVLEQVSAEERAIYAPCLERAVDALELLLNRDVAT 178
Query: 180 FLNH 183
+N
Sbjct: 179 AMNQ 182
>gi|332178236|gb|AEE13925.1| Peptidyl-tRNA hydrolase [Thermodesulfobium narugense DSM 14796]
Length = 192
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 100/176 (56%), Gaps = 12/176 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++++ GLGN G EY RHN+GF+ +D F + F E +++ L I +K
Sbjct: 12 LYLIVGLGNIGKEYALTRHNVGFLFLD-------FLSENLGFKFSGFEAKINSL--IFLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ V +FYK+ + +N +VI+DDLDLDF T+R + G AGH G++SI E
Sbjct: 63 PDTYMNRSGIAVKRVSDFYKIAH-KNIIVIYDDLDLDFKTIRFRPKGSSAGHKGMESIIE 121
Query: 121 KCGKNY-KRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+ G R++IGIGR D VL NF E +L I ++ A L + +R
Sbjct: 122 ELGTQLIPRIKIGIGR-KDGVKPKDWVLSNFDDAELSYLPKIFESAAMCLEIFLER 176
>gi|189502140|ref|YP_001957857.1| peptidyl-tRNA hydrolase [Candidatus Amoebophilus asiaticus 5a2]
gi|238692312|sp|B3ESC6|PTH_AMOA5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189497581|gb|ACE06128.1| hypothetical protein Aasi_0745 [Candidatus Amoebophilus asiaticus
5a2]
Length = 191
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 99/194 (51%), Gaps = 14/194 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFH----AEISEGQLDGLRTI 57
+++ GLGN GHEY RHNIGF +D++ + H + KF A I+ G
Sbjct: 3 YLIIGLGNIGHEYELTRHNIGFQVLDQLAAEH-----QVKFQIDRLALITSFSYKGRSLY 57
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
LIKP T+MNLSG++ +N K+P +EN L I DDL L FG LRL+ G AGHNGLKS
Sbjct: 58 LIKPTTYMNLSGKAAQYWINKLKIP-IENTLTIVDDLALPFGKLRLRPQGSSAGHNGLKS 116
Query: 118 ISEKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN---IARSLPLLA 173
+ E + Y RLR GIG +VL F E L I+ I +S L
Sbjct: 117 LEEYLKTQAYPRLRFGIGNDFTKGQQSNYVLSRFKDQELSLLESPINQACKIIKSFSTLG 176
Query: 174 KREDVSFLNHIVSV 187
+ N VS+
Sbjct: 177 ITRTMEQCNADVSI 190
>gi|239917086|ref|YP_002956644.1| peptidyl-tRNA hydrolase [Micrococcus luteus NCTC 2665]
gi|281414452|ref|ZP_06246194.1| peptidyl-tRNA hydrolase [Micrococcus luteus NCTC 2665]
gi|239838293|gb|ACS30090.1| peptidyl-tRNA hydrolase [Micrococcus luteus NCTC 2665]
Length = 191
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 103/170 (60%), Gaps = 4/170 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTILIK 60
++ GLGNPG EY RHN+G M D + S + + A ++ G+L G R +L K
Sbjct: 7 LIVGLGNPGPEYERTRHNVGQMVADELASRMGVGFTRHRAGAVVATGRLGIGGPRVVLAK 66
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
+MN+SG+ + + +FY + E+ +V+HD+LD+ F TLRLK GGG+ GHNGLKSI+
Sbjct: 67 STGYMNVSGRPVSALASFYGI-GPEDLVVVHDELDIPFDTLRLKRGGGEGGHNGLKSITA 125
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G K+Y R+R+GIGRPP + VL F+ PE+ L +D A ++
Sbjct: 126 SLGTKDYARVRVGIGRPPGRMDVADFVLRPFTKPEQDVLPLHVDRAADAV 175
>gi|188992870|ref|YP_001904880.1| peptidyl-tRNA hydrolase [Xanthomonas campestris pv. campestris str.
B100]
gi|167734630|emb|CAP52840.1| unnamed protein product [Xanthomonas campestris pv. campestris]
Length = 206
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 91/172 (52%), Gaps = 5/172 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW--KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ + RHN GF +D + + W K E ++ ++ G L+K
Sbjct: 19 LIVGLGNPGPEHAQTRHNAGFRFVDAL-AERTGARWGLDSKLFGETAKAEIAGHTVWLLK 77
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + F+K+ E LV HD+LDL GT RLK GG G NGL+
Sbjct: 78 PATFMNLSGKSITAALRFWKI-EPEQLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIR 136
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G + RLR+GIG P ++ VLG + + +D +LPL
Sbjct: 137 LLGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGRDDDMAIGEAVDAAIDALPL 188
>gi|302390886|ref|YP_003826706.1| peptidyl-tRNA hydrolase [Acetohalobium arabaticum DSM 5501]
gi|302202963|gb|ADL11641.1| peptidyl-tRNA hydrolase [Acetohalobium arabaticum DSM 5501]
Length = 185
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHNIGF ID K++ A G + IL K
Sbjct: 1 MKLVVGLGNPGFKYAATRHNIGFRVIDNFADKKQIKIEKEEQEALTGSLYFKGEKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ +++N+Y + EN ++I+DDLDL+ G LR+K+ GG GHNG+KS+
Sbjct: 61 PQTYMNNSGRAVGKLVNWYDIAP-ENVIIIYDDLDLNTGHLRIKSSGGHGGHNGVKSVFN 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + R++IGIGRPP+ + +VLG F ER
Sbjct: 120 HLGSTDISRIKIGIGRPPEYMTVPDYVLGKFDKEER 155
>gi|332180359|gb|AEE16047.1| Peptidyl-tRNA hydrolase [Treponema brennaborense DSM 12168]
Length = 261
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 97/181 (53%), Gaps = 5/181 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQ-LDGLRTILIKP 61
+VA LGN G EY RHN+ + D + F W++KF + L R +KP
Sbjct: 74 LVAFLGNYGREYERTRHNVAWQFADSL-PFADTLNWQRKFKGLYAAADDLGPERVYFLKP 132
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+T+MNLSG+S+ E+ F+K+ E L++HD+L+L GT+ LK GG GHNGL+S
Sbjct: 133 ETYMNLSGESVGELARFFKI-TPERILLVHDELELPPGTVSLKWSGGLGGHNGLRSAKAV 191
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ R R GIGR PD A + +VL F++ ER L I A L K E
Sbjct: 192 LGTADFWRFRFGIGR-PDHADVAGYVLSEFTADERIILSQIFPQSAAMLAQALKAEPQKL 250
Query: 181 L 181
L
Sbjct: 251 L 251
>gi|297805938|ref|XP_002870853.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316689|gb|EFH47112.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 241
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 90/156 (57%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHNIGF ID I + A + G + + +L+KP
Sbjct: 47 WLIVGLGNPGFKYYGTRHNIGFEMIDHIARATEISMNTIQSKALVGIGSVGEVPILLVKP 106
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q +MN SG+S+ + +Y++P L + L+I+DD+ L G LRL+ GG + HNGLK+++E
Sbjct: 107 QAYMNFSGESVGPLAAYYQIP-LRHILMIYDDMGLPNGVLRLQPKGGHSQHNGLKNVTEH 165
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ Y RL IGIG PP + +L FS ER
Sbjct: 166 LNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLER 201
>gi|227548216|ref|ZP_03978265.1| peptidyl-tRNA hydrolase [Corynebacterium lipophiloflavum DSM 44291]
gi|227079690|gb|EEI17653.1| peptidyl-tRNA hydrolase [Corynebacterium lipophiloflavum DSM 44291]
Length = 171
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 96/174 (55%), Gaps = 17/174 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG Y RHN G + ++ + + + KK + E++E L G R +L +
Sbjct: 3 ILIVGLGNPGARYAATRHNAGVIVLEELLDRENARLSVHKKTNTEVAE--LSGGR-VLAR 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
+ +MN+SG + + +YK E Y VI+D+LDL FG + L+ GGGD GHNGLKS+S
Sbjct: 60 TRGYMNVSGGPVKALAGYYKASPAEIY-VIYDELDLGFGEVSLRVGGGDHGHNGLKSVSA 118
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
G + Y +L +GIGRPP +P Y L P + A LP++A
Sbjct: 119 SLGTREYNKLAVGIGRPPGRM-----------APADYVLRPFPNKEAEELPIIA 161
>gi|325954548|ref|YP_004238208.1| peptidyl-tRNA hydrolase [Weeksella virosa DSM 16922]
gi|323437166|gb|ADX67630.1| Peptidyl-tRNA hydrolase [Weeksella virosa DSM 16922]
Length = 188
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 92/168 (54%), Gaps = 3/168 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G +Y RHNIGF ++ I + F EI++ + G L+KP
Sbjct: 4 FLIVGLGNIGDKYENTRHNIGFKVVEEIAKRNDTKFSSSNF-GEIAQFKYKGRPVTLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M + +L LV+ DDL+LDFGTLR++ G D GHNGLK I K
Sbjct: 63 NTYMNLSGDAVRFWMQKENI-DLPQLLVVTDDLNLDFGTLRMRGKGSDGGHNGLKDIQNK 121
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
NY RLR G+G + +VLG+++ E L +D A +
Sbjct: 122 LQNTNYPRLRFGVGNDFLKGQQVDYVLGDWTIEENKILQDRLDMAAEA 169
>gi|255530496|ref|YP_003090868.1| peptidyl-tRNA hydrolase [Pedobacter heparinus DSM 2366]
gi|255343480|gb|ACU02806.1| peptidyl-tRNA hydrolase [Pedobacter heparinus DSM 2366]
Length = 186
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 90/165 (54%), Gaps = 7/165 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI--HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+++ GLGN G EY RHNIGFM D + F + ++AEI G + +I
Sbjct: 3 YLIVGLGNIGPEYACTRHNIGFMIADELVKQQEGTFTNTRLAYYAEIG---FKGRKLHVI 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+++ M ++P LEN LVI DDL L G LRLK G AGHNGLKSI
Sbjct: 60 KPTTYMNLSGKAVNYYMQELRIP-LENVLVIVDDLALPLGKLRLKLQGSSAGHNGLKSIE 118
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
C G+ Y RLR GI + +VL F E L +ID
Sbjct: 119 GLCGGQGYPRLRFGISDNFPKGRQVDYVLAPFDKDELPELPGLID 163
>gi|315650058|ref|ZP_07903137.1| aminoacyl-tRNA hydrolase [Eubacterium saburreum DSM 3986]
gi|315487687|gb|EFU77991.1| aminoacyl-tRNA hydrolase [Eubacterium saburreum DSM 3986]
Length = 211
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 102/177 (57%), Gaps = 2/177 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF ++++ ++K+ + ++ + I+++
Sbjct: 22 MKLIVGLGNPGREYVNTRHNAGFYVVEKLAYELGEDISERKYKGVFTRVRIGNEKAIILE 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ M+++K+ + + +VI+DD++L+ G LR++ G GHNG+KS+
Sbjct: 82 PLTYMNNSGESVRAFMDYFKI-DASDVIVIYDDINLEPGNLRIRLKGSAGGHNGIKSLIA 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G ++ R+++G+G P + HVLG+F+ ++ L + ++ LL E
Sbjct: 141 HMGTSDFPRIKVGVGEKPTKMDLADHVLGHFNDEDKKLLDEAASDAIEAIRLLVAGE 197
>gi|315924904|ref|ZP_07921121.1| aminoacyl-tRNA hydrolase [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621803|gb|EFV01767.1| aminoacyl-tRNA hydrolase [Pseudoramibacter alactolyticus ATCC
23263]
Length = 188
Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG Y + RHN+GFM +D + K + + + R L+
Sbjct: 1 MFLIVGLGNPGPRYADTRHNVGFMAVDALAKAKQVLLNKAEHFGLTGDYREGAERIKLVL 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+ + + ++YK+P+ E +VI+DD+DL G LR++ GG HNG++S+
Sbjct: 61 PQTFMNESGRCVRALADYYKVPS-EQIVVIYDDVDLAPGQLRIRPKGGAGTHNGMRSVVG 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNF 150
G ++ R+RIGIG P + +VLG+
Sbjct: 120 HLGTTDFPRVRIGIGESPRGWDLADYVLGHL 150
>gi|260655929|ref|ZP_05861398.1| aminoacyl-tRNA hydrolase [Jonquetella anthropi E3_33 E1]
gi|260629545|gb|EEX47739.1| aminoacyl-tRNA hydrolase [Jonquetella anthropi E3_33 E1]
Length = 199
Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 3/157 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEI-SEGQLDGLRTILI 59
M ++ GLGNPG EY + RHN G+M +DR+ + KF ++ + R +L+
Sbjct: 1 MRLIVGLGNPGIEYAQTRHNAGWMLLDRLVDRLNAGGGQGKFSGQLWGPLSVGSERLLLL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SGQ++ EV ++ + + LV+ D+++L G LR +T G GHNGLKS+
Sbjct: 61 KPLTYMNASGQAVGEVARYWNIAP-SDILVLSDEINLAPGRLRFRTSGSAGGHNGLKSVI 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + RLRIG+G P + + HVLG S +R
Sbjct: 120 AHLGTAEFGRLRIGVGGKPQGSDLADHVLGRMSPTDR 156
>gi|163753733|ref|ZP_02160856.1| peptidyl-tRNA hydrolase [Kordia algicida OT-1]
gi|161325947|gb|EDP97273.1| peptidyl-tRNA hydrolase [Kordia algicida OT-1]
Length = 213
Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 88/160 (55%), Gaps = 13/160 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-----AWKKKFHAEISEGQLDGLRT 56
F++ GLGN G EY RHNIGF +D FF +K ++ + G
Sbjct: 29 FLIVGLGNIGSEYENTRHNIGFKIVD------FFAKKEELTFKTDKLGDLCTYKFKGRTF 82
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
I +KP T+MNLSG+++ M K+P +EN L+I DDL+L+FGT+R+KT G D GHNGLK
Sbjct: 83 IFLKPSTYMNLSGKAVRYWMTKEKIP-VENILIITDDLNLEFGTIRVKTKGSDGGHNGLK 141
Query: 117 SISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
SI Y R R GI + +VLG +++ E
Sbjct: 142 SIQALLNTTKYPRFRFGISADFGKGRQVNYVLGEWNAEEE 181
>gi|83588952|ref|YP_428961.1| peptidyl-tRNA hydrolase [Moorella thermoacetica ATCC 39073]
gi|119390960|sp|Q2RMC1|PTH_MOOTA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|83571866|gb|ABC18418.1| peptidyl-tRNA hydrolase [Moorella thermoacetica ATCC 39073]
Length = 190
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 96/169 (56%), Gaps = 2/169 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ +V GLGNPG Y RHN GFM +D + + + A +G + R +L+K
Sbjct: 4 VLMVVGLGNPGPRYATTRHNAGFMVVDLLADDLGITLDRTREQALTGQGLVGNNRVLLVK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQ++ + +Y + E LVIHDDLDL G LRL+ GG GH GL+SI
Sbjct: 64 PQTYMNNSGQAVAPLARWYGIAP-EAILVIHDDLDLAPGRLRLRRGGSSGGHRGLQSIIT 122
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
G RL+IGIGRPP ++I +VL FS + + P++ AR+
Sbjct: 123 HLGTTAVPRLKIGIGRPPLGQNVIDYVLKPFSEGDWELIRPVLLEAARA 171
>gi|331003612|ref|ZP_08327108.1| peptidyl-tRNA hydrolase [Lachnospiraceae oral taxon 107 str. F0167]
gi|330412332|gb|EGG91724.1| peptidyl-tRNA hydrolase [Lachnospiraceae oral taxon 107 str. F0167]
Length = 211
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 105/184 (57%), Gaps = 2/184 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF ++++ ++K+ + ++ + I+++
Sbjct: 22 MKLIVGLGNPGREYVNTRHNAGFYVVEKLAYELGEDISERKYKGVFTRVRIGNEKAIILE 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ M+++K+ + + +VI+DD++L+ G LR++ G GHNG+KS+
Sbjct: 82 PLTYMNNSGESVRAFMDYFKI-DASDVIVIYDDINLEPGNLRIRLKGSAGGHNGIKSLIA 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ R+++G+G P + HVLG F+ ++ L + ++ L+ + + +
Sbjct: 141 HMGTSDFPRIKVGVGEKPAKMDLADHVLGRFNDTDKKLLDEAASDAIEAIKLMVEDQYDT 200
Query: 180 FLNH 183
+N
Sbjct: 201 AMNR 204
>gi|285017304|ref|YP_003375015.1| peptidyl-tRNA hydrolase (pth) protein [Xanthomonas albilineans GPE
PC73]
gi|283472522|emb|CBA15027.1| probable peptidyl-trna hydrolase (pth) protein [Xanthomonas
albilineans]
Length = 194
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW--KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ RHN GF +D + W + K EI++ + G L+K
Sbjct: 6 LIVGLGNPGAEHANTRHNAGFRFVDHLLQ-QAGARWSVEAKLFGEIAKVDVAGQSVWLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ + ++K+ + L+ HDDLDL GT+RLK GG G NGL+
Sbjct: 65 PATYMNLSGKSVTAALRYWKIEPAQ-ALLAHDDLDLAPGTVRLKFDGGHGGQNGLRDTIR 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G + RLRIGIG P ++ VL S ++ + ID+ LPL +
Sbjct: 124 LLGHAGFHRLRIGIGHPGHKDKVVPWVLSRASQADQILIDRAIDDALAVLPLAVQ 178
>gi|308235055|ref|ZP_07665792.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis ATCC 14018]
gi|311114597|ref|YP_003985818.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis ATCC 14019]
gi|310946091|gb|ADP38795.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis ATCC 14019]
Length = 199
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 95/163 (58%), Gaps = 10/163 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG--QLDG--LRTI 57
+++ GLGNPG +Y RHN+GFM D + K +++ +G LDG +
Sbjct: 6 WLIVGLGNPGSKYEGTRHNMGFMVADVLSERWSISFSDHKGLSKLGKGVMNLDGKSAKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP TFMN SG ++ + ++Y++ ++ ++IHDD+DLDFG +++K+GG GHNG++S
Sbjct: 66 LAKPLTFMNDSGAAVSSISSYYQIET-DHIVIIHDDMDLDFGRIKVKSGGSAGGHNGIRS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDTAH----IIRHVLGNFSSPER 155
I G Y R+R+G+G AH + VLG F+ ++
Sbjct: 125 IDRSLGTPQYARVRMGVGHAQRGAHAHDNTVNWVLGGFAGAQK 167
>gi|269796294|ref|YP_003315749.1| peptidyl-tRNA hydrolase [Sanguibacter keddieii DSM 10542]
gi|269098479|gb|ACZ22915.1| peptidyl-tRNA hydrolase [Sanguibacter keddieii DSM 10542]
Length = 202
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 107/180 (59%), Gaps = 9/180 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE-------GQLDG 53
+++V GLGNPG +Y NRHN+G M +D + S H + A ++E G + G
Sbjct: 8 LWLVVGLGNPGPQYAGNRHNVGQMVLDELASRHGGSFSAHRSRAAVAEVRLGVLPGGVPG 67
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
R +L KP T+MN SG + + ++++ ++ LV+HD+LD+ FG +R K GGG+ GHN
Sbjct: 68 PRVVLAKPSTYMNTSGGPVAGLAQYFQV-EPDHVLVVHDELDIPFGDVRCKIGGGEGGHN 126
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GL+ IS+ G K+Y R+R GIGRPP VL +F + ER L ++D A ++ ++
Sbjct: 127 GLRDISKALGTKDYLRVRTGIGRPPGRMDTADFVLKDFGTVERKELPFLLDTSADAVEMV 186
>gi|66769658|ref|YP_244420.1| peptidyl-tRNA hydrolase [Xanthomonas campestris pv. campestris str.
8004]
gi|81304387|sp|Q4URC3|PTH_XANC8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|66574990|gb|AAY50400.1| peptidyl tRNA hydrolase [Xanthomonas campestris pv. campestris str.
8004]
Length = 193
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 90/172 (52%), Gaps = 5/172 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW--KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ + RHN GF +D + + W K E ++ + G L+K
Sbjct: 6 LIVGLGNPGPEHAQTRHNAGFRFVDAL-AERTGARWGLDSKLFGETAKADIAGHTVWLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + F+K+ E LV HD+LDL GT RLK GG G NGL+
Sbjct: 65 PATFMNLSGKSITAALRFWKI-EPEQLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIR 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G + RLR+GIG P ++ VLG + + +D +LPL
Sbjct: 124 LLGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGRDDDMAIGEAVDAAIDALPL 175
>gi|302336342|ref|YP_003801549.1| peptidyl-tRNA hydrolase [Olsenella uli DSM 7084]
gi|301320182|gb|ADK68669.1| peptidyl-tRNA hydrolase [Olsenella uli DSM 7084]
Length = 197
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 11/159 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG----LRTI 57
+V GLGNPG Y RHN GF +D + WK + ++ G RT+
Sbjct: 9 LLVCGLGNPGDAYEHTRHNAGFAVVDALAERGCVSYWKSEAGCLVASWGRRGPDGRTRTV 68
Query: 58 LI-KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
L+ KPQ +MN+SG L ++M + + + LV+HD++DL G +R+K+GGG HNGL+
Sbjct: 69 LLAKPQAYMNVSGGPLSKLMRQRGI-SAQEVLVVHDEVDLPSGVVRVKSGGGLNAHNGLR 127
Query: 117 SISEKCG-KNYKRLRIGIGRPPDTAHI----IRHVLGNF 150
SI++K G +++ R+R GIGRPP + +R + G+F
Sbjct: 128 SIADKLGTRDFARVRCGIGRPPGRMSVADFALRQLKGSF 166
>gi|26451849|dbj|BAC43017.1| putative CRS2 [Arabidopsis thaliana]
Length = 246
Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 90/156 (57%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHNIGF ID I + A + G + + +L+KP
Sbjct: 52 WLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKP 111
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q +MN SG+S+ + +Y++P L + L+I+DDL L G LRL+ GG + HNGLK+++E
Sbjct: 112 QGYMNFSGESVGPLAAYYQIP-LRHILMIYDDLGLSNGVLRLQPKGGHSQHNGLKNVTEH 170
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ Y RL IGIG PP + +L FS ER
Sbjct: 171 LNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLER 206
>gi|325067353|ref|ZP_08126026.1| peptidyl-tRNA hydrolase [Actinomyces oris K20]
Length = 200
Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 103/178 (57%), Gaps = 11/178 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI--HSFHFFPAWKKKFHAEISEGQLD------- 52
++V GLGNPG Y NRHN+G+M +D + + F + KK A ++EG+L
Sbjct: 5 WLVVGLGNPGTRYARNRHNVGYMVLDVLAERTGSRF-SQHKKARARVAEGRLSMMPGGAP 63
Query: 53 GLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGH 112
G R IL +P MNLSG + ++++Y + LVIHD+LDL LRLK GGG+ GH
Sbjct: 64 GPRVILAEPSVLMNLSGGPVAGLVSYYGIDPASRLLVIHDELDLPAHELRLKRGGGEGGH 123
Query: 113 NGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
NGL+SIS+ K+Y RLR+GIGRPP VL +F ER L ++ A ++
Sbjct: 124 NGLRSISKSISTKDYARLRVGIGRPPGRQDPSDFVLSDFPGRERADLGVTLEQAADAV 181
>gi|319787941|ref|YP_004147416.1| peptidyl-tRNA hydrolase [Pseudoxanthomonas suwonensis 11-1]
gi|317466453|gb|ADV28185.1| peptidyl-tRNA hydrolase [Pseudoxanthomonas suwonensis 11-1]
Length = 193
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 92/176 (52%), Gaps = 3/176 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ +RHN GF +D + + K E + + G + L+KP
Sbjct: 6 LIVGLGNPGPEHALDRHNAGFRLVDTLAERQGVRFGLESKLFGETARVDIGGQQVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E L++HD+LDL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSVTAALRFWKI-EPEQALLVHDELDLPPGTARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G + RLRIGIG P ++ VLG + + ID+ LPL+ E
Sbjct: 125 LGHGRFHRLRIGIGHPGHKDRVVGWVLGKPGKDDDILIGRAIDDAIDVLPLVVGGE 180
>gi|166710810|ref|ZP_02242017.1| peptidyl-tRNA hydrolase [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 194
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 89/171 (52%), Gaps = 3/171 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D I A K E ++ + G L+KP
Sbjct: 6 LIVGLGNPGQEHAQTRHNAGFRFVDALIERSGARWALDSKLFGETAKVDIAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E+ LV HD+LDL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSITAALRFWKI-EPEHLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G + RLR+GIG P ++ VLG + + ID LPL
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGREDDAAIGTAIDAAIDVLPL 175
>gi|146298889|ref|YP_001193480.1| peptidyl-tRNA hydrolase [Flavobacterium johnsoniae UW101]
gi|146153307|gb|ABQ04161.1| peptidyl-tRNA hydrolase [Flavobacterium johnsoniae UW101]
Length = 225
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 15/161 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAE------ISEGQLDGLR 55
+++ GLGN G EY RHNIGF +D F A K+ E ++E + G
Sbjct: 41 YLIVGLGNIGAEYVNTRHNIGFKVLD-------FLAKKEGLSFETVKLGSLAEYKFKGRT 93
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
L+KP T+MNLSG+++ M+ +P LEN LVI DDL+L FGT+R+K G D GHNGL
Sbjct: 94 FFLLKPNTYMNLSGKAVKYWMDKENIP-LENILVITDDLNLSFGTIRIKPKGSDGGHNGL 152
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K+I+ +NY R R GI I +VLG +++ E
Sbjct: 153 KNINLVLNTQNYTRYRFGISDQFKKGQQIDYVLGEWNAEEE 193
>gi|71275257|ref|ZP_00651544.1| Peptidyl-tRNA hydrolase [Xylella fastidiosa Dixon]
gi|71902208|ref|ZP_00684220.1| Peptidyl-tRNA hydrolase [Xylella fastidiosa Ann-1]
gi|170731255|ref|YP_001776688.1| peptidyl-tRNA hydrolase [Xylella fastidiosa M12]
gi|238687962|sp|B0U5Y6|PTH_XYLFM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71164066|gb|EAO13781.1| Peptidyl-tRNA hydrolase [Xylella fastidiosa Dixon]
gi|71728034|gb|EAO30245.1| Peptidyl-tRNA hydrolase [Xylella fastidiosa Ann-1]
gi|167966048|gb|ACA13058.1| Aminoacyl-tRNA hydrolase [Xylella fastidiosa M12]
Length = 192
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 94/171 (54%), Gaps = 3/171 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF +D + A + K A ++ + G L++P
Sbjct: 6 LIVGLGNPGSEYIKTRHNAGFRFVDGLVQREGQCWALESKLFAYVARVFIAGQWVWLLRP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ +NF+K+ E LV HD+LD G +RLK GG G NGL+ I++
Sbjct: 66 VTFMNLSGKSIFAGLNFWKIKP-EQMLVAHDELDFPPGAVRLKFDGGHGGQNGLRDITKL 124
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G + RLR+GIG P ++ VLG + E + ++ + LPL
Sbjct: 125 LGHGRFHRLRVGIGHPGHKERVVSWVLGCPTCDENIAIDAALERASVVLPL 175
>gi|323344943|ref|ZP_08085167.1| aminoacyl-tRNA hydrolase [Prevotella oralis ATCC 33269]
gi|323094213|gb|EFZ36790.1| aminoacyl-tRNA hydrolase [Prevotella oralis ATCC 33269]
Length = 191
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 88/162 (54%), Gaps = 2/162 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GFM +D ++ K + ++E L G + IL+KP
Sbjct: 4 YLICGLGNPGDEYVGTRHNTGFMVLDAFAKASNI-VFEDKRYGFVAETSLKGRKIILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ + + + L+I DD+ L G RLK+ G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLTKENIDQ-KRLLIISDDVALPLGAFRLKSNGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G+++ RLR+GIG VLG +S + L P ID
Sbjct: 122 IGQDFARLRMGIGNDYLKGGQTNWVLGRYSEEDVKTLHPSID 163
>gi|21674075|ref|NP_662140.1| peptidyl-tRNA hydrolase [Chlorobium tepidum TLS]
gi|26398419|sp|Q8KD05|PTH_CHLTE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|21647228|gb|AAM72482.1| peptidyl-tRNA hydrolase [Chlorobium tepidum TLS]
Length = 187
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 95/170 (55%), Gaps = 4/170 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP + RHNIGF ID + F + K + ++ G IL+K
Sbjct: 1 MKLIVGLGNPELRHAATRHNIGFDVIDHLAGSSTFSSGKGNY--RFTKITAPGGPLILVK 58
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG +++ MNF+K+ EN LVI DD+++ GT+R++ G G NGLK I +
Sbjct: 59 PMTYMNLSGHAVVAAMNFWKIER-ENLLVICDDVNIPLGTIRIRAKGSAGGQNGLKHIIQ 117
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + RLR+G+G A + VL F++ ER + +I A ++
Sbjct: 118 SLGSEEFARLRVGVGGENMPASLSSFVLSKFTAEERKCIDKVIPVCADAV 167
>gi|82701725|ref|YP_411291.1| peptidyl-tRNA hydrolase [Nitrosospira multiformis ATCC 25196]
gi|119390969|sp|Q2YBH2|PTH_NITMU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|82409790|gb|ABB73899.1| peptidyl-tRNA hydrolase [Nitrosospira multiformis ATCC 25196]
Length = 191
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFH---AEISEGQLDGLRT 56
M ++ GLGNPG EY RHN G + R+ KFH A I +G+ + +
Sbjct: 1 MKLIVGLGNPGREYAATRHNAGAWWVVRLADQLGVTLKADGKFHGLCARIGQGESE---S 57
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
L+ PQT+MN SG+++ + FY++ E LV+HD+LDL G RLK GG GHNGLK
Sbjct: 58 WLLNPQTYMNASGRAVAALCRFYRI-QPEQMLVVHDELDLPPGVSRLKLDGGLGGHNGLK 116
Query: 117 SISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
I G + + RLRIGIG P + ++ +VL E + I++ PL+A+
Sbjct: 117 DIVAHLGTREFWRLRIGIGHPGEKHAVVNYVLQPPRKEEAALIDTAINDSLEVWPLIAE 175
>gi|58427818|gb|AAW76855.1| peptidyl tRNA hydrolase [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 204
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 89/171 (52%), Gaps = 3/171 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D I A K E ++ + G L+KP
Sbjct: 16 LIVGLGNPGQEHAQTRHNAGFRFVDSLIERSGARWALDSKLFGETAKVDIAGQPVWLLKP 75
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E+ LV HD+LDL GT RLK GG G NGL+
Sbjct: 76 ATFMNLSGKSITAALRFWKI-EPEHLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIGL 134
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G + RLR+GIG P ++ VLG + + ID LPL
Sbjct: 135 LGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGREDDAAIGTAIDAAIDVLPL 185
>gi|329119514|ref|ZP_08248199.1| aminoacyl-tRNA hydrolase [Neisseria bacilliformis ATCC BAA-1200]
gi|327464447|gb|EGF10747.1| aminoacyl-tRNA hydrolase [Neisseria bacilliformis ATCC BAA-1200]
Length = 190
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 102/173 (58%), Gaps = 5/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILIK 60
++AGLGNPG EY RHN GF +D + + + AWK KK+ ++ L+K
Sbjct: 5 LIAGLGNPGTEYEHTRHNAGFWFVDEL-ARQWKAAWKHEKKYAGHVARVSRPEGEVWLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + FYK+ E L +HD+LDL G++R K GGG+ GHNGLK I
Sbjct: 64 PDTYMNLSGKAVAALAQFYKIRPAE-ILTVHDELDLPCGSVRFKLGGGNGGHNGLKDIQA 122
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
K G ++ RLR+GIG P + +I HVL S+ ER + I ++PL+
Sbjct: 123 KLGTPDFYRLRLGIGHPGERTLVIGHVLNKPSAAERELIDRSIGKALAAMPLI 175
>gi|313678898|ref|YP_004056638.1| aminoacyl-tRNA hydrolase [Mycoplasma bovis PG45]
gi|312950211|gb|ADR24806.1| aminoacyl-tRNA hydrolase [Mycoplasma bovis PG45]
Length = 188
Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 96/169 (56%), Gaps = 11/169 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAE--ISEGQLDGLRTIL 58
M ++ GLGNPG+EY RHN GF+ ID+I K+KF+ E IS+G IL
Sbjct: 1 MKLIVGLGNPGNEYRFTRHNAGFLAIDKICEKLNISLNKEKFNGEFVISDG------FIL 54
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+P T+MN SG + + NFYK+ + + +VI+DDL G +K GG AGH G++S+
Sbjct: 55 ARPLTYMNKSGDFIYSIANFYKIDS-SDIIVIYDDLSFSVGQAAIKIGGSSAGHKGIESL 113
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
K N +KR+R+GIG + I +VL FS E + +++ +A
Sbjct: 114 MSKFKTNDFKRIRVGIG-ASNNLSIKDYVLSLFSKEEMLIIEEVLEKVA 161
>gi|315653945|ref|ZP_07906861.1| aminoacyl-tRNA hydrolase [Lactobacillus iners ATCC 55195]
gi|315488641|gb|EFU78287.1| aminoacyl-tRNA hydrolase [Lactobacillus iners ATCC 55195]
Length = 185
Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 102/183 (55%), Gaps = 5/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM ID + K+KF + ++ G IL++
Sbjct: 1 MKLIVGLGNPGLKYQKTKHNTGFMAIDYYLKKNGLSFNKEKFEGFWIKTKIKGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++++F+K+ + + LVIHDD+D+ +RL+ G GHNG+KSI
Sbjct: 61 PQTYMNDSGKSVTQLVDFFKI-DAHDILVIHDDMDMPVAKIRLRKSGKSGGHNGIKSIIN 119
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
C + RL+IGI P ++ VL FSS + + +++ + + +
Sbjct: 120 -CLNDSEFNRLKIGIDHPTKET-VVSWVLTPFSSDDYIKMEATFATVSQIIDDFIDNKSI 177
Query: 179 SFL 181
FL
Sbjct: 178 EFL 180
>gi|212716157|ref|ZP_03324285.1| hypothetical protein BIFCAT_01073 [Bifidobacterium catenulatum DSM
16992]
gi|225351842|ref|ZP_03742865.1| hypothetical protein BIFPSEUDO_03443 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|212661524|gb|EEB22099.1| hypothetical protein BIFCAT_01073 [Bifidobacterium catenulatum DSM
16992]
gi|225157089|gb|EEG70428.1| hypothetical protein BIFPSEUDO_03443 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 199
Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 92/163 (56%), Gaps = 10/163 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD----GLRTI 57
+++AGLGNPG +Y RHN+GFM D + K A + +G ++ ++
Sbjct: 6 WLIAGLGNPGSKYEGTRHNMGFMAADLLAERWSVNFSDHKGLAMLGKGVMNLSGRNVKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SG +L + +Y++ ++ +VIHDD+DLDFG +++K GG GHNG+KS
Sbjct: 66 LAKPLTYMNESGNALASISAYYQIEP-DHIVVIHDDMDLDFGRIKVKAGGSAGGHNGIKS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDTAH----IIRHVLGNFSSPER 155
I G Y R+R+G+G AH + VLG F +R
Sbjct: 125 IDRALGTPKYARVRMGVGHAQRGAHAHDNTVNWVLGGFGPDQR 167
>gi|330967423|gb|EGH67683.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 194
Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 93/173 (53%), Gaps = 8/173 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY + RHN G ++RI + + P ++KF G L+
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVP--ERKFFGLTGRFTHQGQDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHN L+ I
Sbjct: 64 IPTTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNRLRDII 122
Query: 120 EKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ G + RLR+GIG P D + + VLG E+ L ID LP
Sbjct: 123 AQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|309803786|ref|ZP_07697872.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LactinV 11V1-d]
gi|312872596|ref|ZP_07732664.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LEAF 2062A-h1]
gi|325913116|ref|ZP_08175486.1| aminoacyl-tRNA hydrolase [Lactobacillus iners UPII 60-B]
gi|308164195|gb|EFO66456.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LactinV 11V1-d]
gi|311091958|gb|EFQ50334.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LEAF 2062A-h1]
gi|325477537|gb|EGC80679.1| aminoacyl-tRNA hydrolase [Lactobacillus iners UPII 60-B]
Length = 185
Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 102/183 (55%), Gaps = 5/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM ID + K+KF + ++ G IL++
Sbjct: 1 MKLIVGLGNPGLKYQKTKHNTGFMAIDYYLKKNGLSFNKEKFEGFWIKTKIKGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++++F+K+ + + LVIHDD+D+ +RL+ G GHNG+KSI
Sbjct: 61 PQTYMNDSGKSVTQLVDFFKI-DAHDILVIHDDMDMPVAKIRLRKSGKSGGHNGIKSIIH 119
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
C + RL+IGI P ++ VL FSS + + +++ + + +
Sbjct: 120 -CLNDSEFNRLKIGIDHPTKET-VVSWVLTPFSSDDCTKMAATFATVSQIIDDFIDNKSI 177
Query: 179 SFL 181
FL
Sbjct: 178 EFL 180
>gi|84625060|ref|YP_452432.1| peptidyl-tRNA hydrolase [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|122879276|ref|YP_202240.6| peptidyl-tRNA hydrolase [Xanthomonas oryzae pv. oryzae KACC10331]
gi|188575472|ref|YP_001912401.1| peptidyl-tRNA hydrolase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|68052873|sp|Q5GWR6|PTH_XANOR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391037|sp|Q2NZW9|PTH_XANOM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238689541|sp|B2SQP2|PTH_XANOP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|84369000|dbj|BAE70158.1| Peptidyl-tRNA hydrolase [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188519924|gb|ACD57869.1| peptidyl-tRNA hydrolase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 194
Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 89/171 (52%), Gaps = 3/171 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D I A K E ++ + G L+KP
Sbjct: 6 LIVGLGNPGQEHAQTRHNAGFRFVDSLIERSGARWALDSKLFGETAKVDIAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E+ LV HD+LDL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSITAALRFWKI-EPEHLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIGL 124
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G + RLR+GIG P ++ VLG + + ID LPL
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGREDDAAIGTAIDAAIDVLPL 175
>gi|15834803|ref|NP_296562.1| peptidyl-tRNA hydrolase [Chlamydia muridarum Nigg]
gi|270284969|ref|ZP_06194363.1| peptidyl-tRNA hydrolase [Chlamydia muridarum Nigg]
gi|270288993|ref|ZP_06195295.1| peptidyl-tRNA hydrolase [Chlamydia muridarum Weiss]
gi|301336366|ref|ZP_07224568.1| peptidyl-tRNA hydrolase [Chlamydia muridarum MopnTet14]
gi|7404431|sp|P49607|PTH_CHLMU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|7190220|gb|AAF39057.1| peptidyl-tRNA hydrolase [Chlamydia muridarum Nigg]
Length = 179
Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 99/158 (62%), Gaps = 7/158 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
+V G+GNPG +Y RHNIGF+ +D + S F A+++ + + + + +LIK
Sbjct: 4 LVVGIGNPGRQYVWTRHNIGFLFLDMLAS-RFSGAFREAPRLFSSFMKVETSCGVIVLIK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T++NL+G+++L F+ + ++E L++ DD++ +FG++R + G GHNGLK+ ++
Sbjct: 63 PSTYVNLTGKAVLAAKRFFGV-SVEGILIVADDINREFGSIRFRQDCGAGGHNGLKNTTQ 121
Query: 121 KCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPER 155
N Y +LR+G+GRP P++ + +VL NFS ER
Sbjct: 122 VLQSNHYWQLRLGVGRPSNPESEGVADYVLSNFSFNER 159
>gi|152965022|ref|YP_001360806.1| aminoacyl-tRNA hydrolase [Kineococcus radiotolerans SRS30216]
gi|189038154|sp|A6W6V3|PTH_KINRD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|151359539|gb|ABS02542.1| Aminoacyl-tRNA hydrolase [Kineococcus radiotolerans SRS30216]
Length = 198
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 99/162 (61%), Gaps = 9/162 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS-------FHFFPAWKKKFHAEISEGQLDGL 54
++V GLGNPG EY RHN+G M +D + S H A + ++ G G
Sbjct: 5 WLVVGLGNPGAEYERTRHNVGQMVLDELASRTRGSFKRHRTGARTAEVRLGVAPGGAPGP 64
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L P ++MN+SG + + ++ + ++E+ +V+HD+LD+ FG++RLK GGG+ GHNG
Sbjct: 65 RVVLAAPTSYMNVSGGPVAGLAKYFDV-DVEHLVVVHDELDVPFGSVRLKRGGGEGGHNG 123
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
L+SIS+ G K+Y R+R+GIGRPP VL FSS E+
Sbjct: 124 LRSISKSLGDKDYARVRVGIGRPPGRQDPADFVLKEFSSTEK 165
>gi|330836937|ref|YP_004411578.1| peptidyl-tRNA hydrolase [Spirochaeta coccoides DSM 17374]
gi|329748840|gb|AEC02196.1| peptidyl-tRNA hydrolase [Spirochaeta coccoides DSM 17374]
Length = 192
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 89/157 (56%), Gaps = 6/157 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQ---LDGLRTIL 58
I GLGNPG EY RHN+GF + + +F P +K+F G G R +L
Sbjct: 1 MIACGLGNPGTEYEHTRHNVGFDVVATVAAFLHVP-MRKRFCRPYERGDGFFSSGTRFVL 59
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P TFMN SG+ L V +LP + +V+ D +DL G++R++ GG DAGH GLKSI
Sbjct: 60 MRPLTFMNGSGRILKYVQRLLRLPG-TDLIVVCDQMDLPCGSIRIRKGGKDAGHRGLKSI 118
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ G +++ RL IG+GRP ++ HVL + E
Sbjct: 119 IQHYGSEDFIRLYIGVGRPSAGTSVVEHVLSRPAPDE 155
>gi|15240875|ref|NP_198645.1| peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana]
gi|75309164|sp|Q9FKN4|CRS2A_ARATH RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2-A, chloroplastic; AltName: Full=CRS2-like protein
A; AltName: Full=Chloroplastic RNA splicing factor 2-A;
Flags: Precursor
gi|9758861|dbj|BAB09443.1| unnamed protein product [Arabidopsis thaliana]
gi|90962962|gb|ABE02405.1| At5g38290 [Arabidopsis thaliana]
gi|332006908|gb|AED94291.1| chloroplastic group IIB intron splicing facilitator CRS2-A
[Arabidopsis thaliana]
Length = 246
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 90/156 (57%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHNIGF ID I + A + G + + +L+KP
Sbjct: 52 WLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKP 111
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q +MN SG+S+ + +Y++P L + L+I+DD+ L G LRL+ GG + HNGLK+++E
Sbjct: 112 QGYMNFSGESVGPLAAYYQIP-LRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEH 170
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ Y RL IGIG PP + +L FS ER
Sbjct: 171 LNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLER 206
>gi|42573527|ref|NP_974860.1| peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana]
gi|332006907|gb|AED94290.1| chloroplastic group IIB intron splicing facilitator CRS2-A
[Arabidopsis thaliana]
Length = 250
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 90/156 (57%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHNIGF ID I + A + G + + +L+KP
Sbjct: 56 WLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKP 115
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q +MN SG+S+ + +Y++P L + L+I+DD+ L G LRL+ GG + HNGLK+++E
Sbjct: 116 QGYMNFSGESVGPLAAYYQIP-LRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEH 174
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ Y RL IGIG PP + +L FS ER
Sbjct: 175 LNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLER 210
>gi|255065625|ref|ZP_05317480.1| aminoacyl-tRNA hydrolase [Neisseria sicca ATCC 29256]
gi|255049943|gb|EET45407.1| aminoacyl-tRNA hydrolase [Neisseria sicca ATCC 29256]
Length = 192
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 105/175 (60%), Gaps = 8/175 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D + ++ + ++K KKF E++ L G L+K
Sbjct: 7 MIVGLGNPGGEYEQTRHNAGFWFLDEL-AWQWKVSFKEEKKFFGEVARANLPGGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQS+ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PMTFMNRSGQSVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ G NY RLR+GI P D ++ +VL S+ R I + IA+SL + K
Sbjct: 125 RLGTPNYYRLRLGIDHPGDRNLVVAYVLNKPSAEHRQ---QIDEAIAKSLKAIPK 176
>gi|125543850|gb|EAY89989.1| hypothetical protein OsI_11554 [Oryza sativa Indica Group]
gi|125586236|gb|EAZ26900.1| hypothetical protein OsJ_10828 [Oryza sativa Japonica Group]
Length = 274
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 95/190 (50%), Gaps = 17/190 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GF ID + F A EG ++G+ +L KP
Sbjct: 61 WLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLAKP 120
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG------- 114
QT+MNLSG+S+ + +YKLP L LV DD+DL G LRL+ GG HNG
Sbjct: 121 QTYMNLSGESVGPLAAYYKLP-LNRVLVAFDDMDLPCGVLRLQPKGGYGRHNGSVDFIIM 179
Query: 115 -------LKSISEKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
+KS+ KN + RLRIGIGRPP VL F+ R + I+
Sbjct: 180 CFNELIRVKSLIYHFRKNREFGRLRIGIGRPPGQMDPKAFVLQKFNKTGRERIDSAIEEG 239
Query: 166 ARSLPLLAKR 175
L L+ +
Sbjct: 240 VEILKLVVTK 249
>gi|315636067|ref|ZP_07891324.1| aminoacyl-tRNA hydrolase [Arcobacter butzleri JV22]
gi|315479636|gb|EFU70312.1| aminoacyl-tRNA hydrolase [Arcobacter butzleri JV22]
Length = 183
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 101/173 (58%), Gaps = 6/173 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M+++ GLGN G +Y RHN+GF+ +D + + F + + L ++
Sbjct: 1 MYLIVGLGNIGEKYQYTRHNVGFLVVDEMTKNLQTSNVNNSNFQSTL----LKSGYSLFA 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG ++ + +YK+ +LEN +VIHDDLDL FGT++ K GGG GHNGLKS+
Sbjct: 57 KPTTYMNNSGVAVHSIKEYYKI-DLENIIVIHDDLDLPFGTVKFKIGGGHGGHNGLKSLD 115
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GK+Y R+RIGIG+P + + VL +FS E L II + ++ L
Sbjct: 116 SHIGKDYIRVRIGIGKPQNKDDVANFVLSDFSKEELNKLEDIIKHTINAIEAL 168
>gi|297565116|ref|YP_003684088.1| peptidyl-tRNA hydrolase [Meiothermus silvanus DSM 9946]
gi|296849565|gb|ADH62580.1| peptidyl-tRNA hydrolase [Meiothermus silvanus DSM 9946]
Length = 195
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 97/165 (58%), Gaps = 11/165 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ G GNPG +Y ++HN+G+ +D++ F + + A I+E L + ++KP
Sbjct: 3 FLIVGQGNPGTQYLRSKHNVGWQVLDKL-GLEF----RIRGDAGIAELSLGDEKGWVMKP 57
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+ N +G+++ F+K+P E LV+HD+LDL G LR K GGG+AG+ GL+SI++
Sbjct: 58 ITYYNATGRAVAPFARFHKIPE-ERILVVHDELDLPLGKLRFKKGGGNAGNYGLESITQA 116
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
G + + RLRIGIG+P VL F + LP+++ +
Sbjct: 117 LGSSAFHRLRIGIGKPKSPEEGASWVLSGFRPDQ----LPVLEKV 157
>gi|298345581|ref|YP_003718268.1| aminoacyl-tRNA hydrolase [Mobiluncus curtisii ATCC 43063]
gi|304391136|ref|ZP_07373088.1| aminoacyl-tRNA hydrolase [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|298235642|gb|ADI66774.1| aminoacyl-tRNA hydrolase [Mobiluncus curtisii ATCC 43063]
gi|304326019|gb|EFL93265.1| aminoacyl-tRNA hydrolase [Mobiluncus curtisii subsp. curtisii ATCC
35241]
Length = 222
Score = 107 bits (266), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 17/188 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID----------RIHSFHFFPAWKKKFHAEISEGQL 51
++V GLGNPG +Y RHN G+M D R S + + G +
Sbjct: 21 WLVVGLGNPGDKYAGTRHNCGYMVTDCFVKQSGQAYRNQSLARAGVVARVATVSLGYG-V 79
Query: 52 DGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG 111
D + I+ ++MN SG + E++++Y+L + + LV+HD+LDL+ G +LK GG D G
Sbjct: 80 DAPKIIVAHTGSYMNESGPGVKELLDYYRLGS-DRLLVVHDELDLEMGYAKLKVGGSDGG 138
Query: 112 HNGLKSISEKCG-KNYKRLRIGIGRPPDTA----HIIRHVLGNFSSPERYFLLPIIDNIA 166
HNGLKSI + G K++ RLRIGIGRP +I VLG ++ L ++D
Sbjct: 139 HNGLKSIQKALGTKDFARLRIGIGRPVKMPGGGFDVINWVLGRIPKSQQSILDEVLDRAV 198
Query: 167 RSLPLLAK 174
+ + +A+
Sbjct: 199 QCVTDIAE 206
>gi|171743239|ref|ZP_02919046.1| hypothetical protein BIFDEN_02368 [Bifidobacterium dentium ATCC
27678]
gi|283455783|ref|YP_003360347.1| peptidyl-tRNA hydrolase [Bifidobacterium dentium Bd1]
gi|171278853|gb|EDT46514.1| hypothetical protein BIFDEN_02368 [Bifidobacterium dentium ATCC
27678]
gi|283102417|gb|ADB09523.1| Peptidyl-tRNA hydrolase [Bifidobacterium dentium Bd1]
Length = 199
Score = 107 bits (266), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD----GLRTI 57
+++AGLGNPG +Y RHN+GFM D + K A + +G ++ ++
Sbjct: 6 WLIAGLGNPGSKYEGTRHNMGFMTADLLAERWSVNFSDHKGLAMLGKGVMNLSGRNVKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKL-PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
L KP T+MN SG ++ + ++Y++ PN + +V+HDD+DLDFG +++K+GG GHNG+K
Sbjct: 66 LAKPLTYMNDSGNAVASISSYYQIEPN--HIVVVHDDMDLDFGRIKVKSGGSAGGHNGIK 123
Query: 117 SISEKCGK-NYKRLRIGIGRPPDTAH----IIRHVLGNFSSPER 155
SI G Y R+R+G+G AH + VLG F +R
Sbjct: 124 SIDRSLGTPKYARVRMGVGHAQRGAHAHDNTVNWVLGGFGPDQR 167
>gi|325912447|ref|ZP_08174842.1| aminoacyl-tRNA hydrolase [Lactobacillus iners UPII 143-D]
gi|325475789|gb|EGC78960.1| aminoacyl-tRNA hydrolase [Lactobacillus iners UPII 143-D]
Length = 185
Score = 107 bits (266), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 102/183 (55%), Gaps = 5/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM ID + K+KF + ++ G IL++
Sbjct: 1 MKLIVGLGNPGVKYQKTKHNTGFMAIDYYLKKNGLSFNKEKFEGFWIKTKIKGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++++F+K+ + + LVIHDD+D+ +RL+ G GHNG+KSI
Sbjct: 61 PQTYMNDSGKSVTQLVDFFKI-DAHDILVIHDDMDMPVAKIRLRKSGKSGGHNGIKSIIH 119
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
C + RL+IGI P ++ VL FSS + + +++ + + +
Sbjct: 120 -CLNDSEFNRLKIGIDHPTKET-VVSWVLTPFSSEDCTKMEATFATVSQIIDDFIDNKSI 177
Query: 179 SFL 181
FL
Sbjct: 178 EFL 180
>gi|259500995|ref|ZP_05743897.1| aminoacyl-tRNA hydrolase [Lactobacillus iners DSM 13335]
gi|302190556|ref|ZP_07266810.1| peptidyl-tRNA hydrolase [Lactobacillus iners AB-1]
gi|312871531|ref|ZP_07731624.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LEAF 3008A-a]
gi|259167689|gb|EEW52184.1| aminoacyl-tRNA hydrolase [Lactobacillus iners DSM 13335]
gi|311092926|gb|EFQ51277.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LEAF 3008A-a]
Length = 185
Score = 107 bits (266), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 102/183 (55%), Gaps = 5/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM ID + K+KF + ++ G IL++
Sbjct: 1 MKLIVGLGNPGLKYQKTKHNTGFMAIDYYLKKNGLSFNKEKFEGFWIKTKIKGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++++F+K+ + + LVIHDD+D+ +RL+ G GHNG+KSI
Sbjct: 61 PQTYMNDSGKSVTQLVDFFKI-DAHDILVIHDDMDMPVAKIRLRKSGKSGGHNGIKSIIN 119
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
C + RL+IGI P ++ VL FSS + + +++ + + +
Sbjct: 120 -CLNDSEFNRLKIGIDHPTKET-VVSWVLTPFSSEDCTKMEATFATVSQIIDDFIDNKSI 177
Query: 179 SFL 181
FL
Sbjct: 178 EFL 180
>gi|86140923|ref|ZP_01059482.1| peptidyl-tRNA hydrolase [Leeuwenhoekiella blandensis MED217]
gi|85832865|gb|EAQ51314.1| peptidyl-tRNA hydrolase [Leeuwenhoekiella blandensis MED217]
Length = 206
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 90/155 (58%), Gaps = 3/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G +Y RHNIGF ID ++ +W + +++ ++ G +L+KP
Sbjct: 22 YLIIGLGNIGPKYDNTRHNIGFKIID-AYAQEKETSWSTEKLGDVAYTKVRGRTVVLLKP 80
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M + ++EN LVI DDL+L+FGT+R+K+ G D GHNGLK I +
Sbjct: 81 NTYMNLSGKAVKYWMQKENI-SIENILVITDDLNLEFGTIRVKSKGSDGGHNGLKDIQNQ 139
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
Y R R GIG I +VLG + E
Sbjct: 140 LSTTKYPRFRFGIGDRFSRGKQIDYVLGVWDKDEE 174
>gi|319779116|ref|YP_004130029.1| Peptidyl-tRNA hydrolase [Taylorella equigenitalis MCE9]
gi|317109140|gb|ADU91886.1| Peptidyl-tRNA hydrolase [Taylorella equigenitalis MCE9]
Length = 264
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 84/137 (61%), Gaps = 5/137 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK--FHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +DR+ H W ++ FH +++ G L+K
Sbjct: 7 LIVGLGNPGPEYEHTRHNAGFWFVDRLALKHGC-NWNQESAFHGYMAKMPSAGGSIFLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ V +FYK+ ++ LV HD+LDL ++LK GGG AGHNGL+ I++
Sbjct: 66 PSTYMNLSGRAVQAVCHFYKI-AVDEVLVAHDELDLPINEIKLKKGGGHAGHNGLRDITK 124
Query: 121 K-CGKNYKRLRIGIGRP 136
+ RLRIGI P
Sbjct: 125 AMASPEFWRLRIGIDHP 141
>gi|262376652|ref|ZP_06069880.1| peptidyl-tRNA hydrolase [Acinetobacter lwoffii SH145]
gi|262308362|gb|EEY89497.1| peptidyl-tRNA hydrolase [Acinetobacter lwoffii SH145]
Length = 193
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 2/183 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++R+ + K KF+ G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFVERLAEQYGITLKKDPKFNGFSGRGNIEGQDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S++ FY + E+ L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 TTFMNLSGKSVVPFAKFYNIAP-ESILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVL S E+ + I + +L E +
Sbjct: 125 IGSNFHRLRIGIGHPGAKDRVSGHVLSKAPSSEQNLMDDAISHALARTKMLVNGEVQQAM 184
Query: 182 NHI 184
N I
Sbjct: 185 NQI 187
>gi|150006996|ref|YP_001301739.1| peptidyl-tRNA hydrolase [Parabacteroides distasonis ATCC 8503]
gi|255015968|ref|ZP_05288094.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_1_7]
gi|298377421|ref|ZP_06987374.1| aminoacyl-tRNA hydrolase [Bacteroides sp. 3_1_19]
gi|301308836|ref|ZP_07214788.1| aminoacyl-tRNA hydrolase [Bacteroides sp. 20_3]
gi|166229429|sp|A6L8V3|PTH_PARD8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|149935420|gb|ABR42117.1| peptidyl-tRNA hydrolase [Parabacteroides distasonis ATCC 8503]
gi|298265835|gb|EFI07495.1| aminoacyl-tRNA hydrolase [Bacteroides sp. 3_1_19]
gi|300833360|gb|EFK63978.1| aminoacyl-tRNA hydrolase [Bacteroides sp. 20_3]
Length = 187
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 93/166 (56%), Gaps = 12/166 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAE----ISEGQLDGLRTI 57
+++ GLGN G EY RHNIGF ++ H + F E I+ ++ I
Sbjct: 3 YLITGLGNIGSEYWGTRHNIGFRVVN-----HLVESVGGNFTEERYGAIARIRVKNCDLI 57
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
++KP TFMNLSG ++ + +P +EN L++ DDL L FGTLRLK G DAGHNGLK+
Sbjct: 58 VLKPNTFMNLSGNAVRYWLQKENIP-VENLLIVVDDLALPFGTLRLKPKGSDAGHNGLKN 116
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
I++ + Y RLR GIG I +VLG F PE L+P I
Sbjct: 117 IAQLLNTQEYSRLRFGIGSDFPRGGQIDYVLGKF-PPEELQLMPEI 161
>gi|315656086|ref|ZP_07908977.1| aminoacyl-tRNA hydrolase [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|315493088|gb|EFU82688.1| aminoacyl-tRNA hydrolase [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 222
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 17/188 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID----------RIHSFHFFPAWKKKFHAEISEGQL 51
++V GLGNPG +Y RHN G+M D R S + + G +
Sbjct: 21 WLVVGLGNPGDKYAGTRHNCGYMVTDCFVKQSGQAYRNQSLARAGVVARVATVSLGYG-V 79
Query: 52 DGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG 111
D + I+ ++MN SG + E++++Y+L + + LV+HD+LDL+ G +LK GG D G
Sbjct: 80 DAPKIIVAHTGSYMNESGPGVKELLDYYRLGS-DRLLVVHDELDLEMGYAKLKVGGSDGG 138
Query: 112 HNGLKSISEKCG-KNYKRLRIGIGRPPDTA----HIIRHVLGNFSSPERYFLLPIIDNIA 166
HNGLKSI + G K++ RLRIGIGRP +I VLG ++ L ++D
Sbjct: 139 HNGLKSIQKALGTKDFARLRIGIGRPVKMPGGGFDVINWVLGRIPKSQQSILDEVLDRAV 198
Query: 167 RSLPLLAK 174
+ + +A+
Sbjct: 199 QCVTDIAE 206
>gi|262201498|ref|YP_003272706.1| peptidyl-tRNA hydrolase [Gordonia bronchialis DSM 43247]
gi|262084845|gb|ACY20813.1| peptidyl-tRNA hydrolase [Gordonia bronchialis DSM 43247]
Length = 188
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 108/188 (57%), Gaps = 7/188 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTIL 58
M I+ GLGNPG Y + RHN+G M D + + WK K+ AE++ L G ++
Sbjct: 1 MKIIVGLGNPGSRYEKTRHNVGAMVADALVA-SAGERWKVHKRSGAEVASITLAGQSVLV 59
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
KP+T+MN SG+ + + FY + + +V HD+LD+DFG +RLK GGG+ GHNGL+SI
Sbjct: 60 AKPRTYMNESGRQIGPLCKFYSV-GPADLIVAHDELDIDFGAVRLKRGGGEGGHNGLRSI 118
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-- 175
S+ G ++Y R+R+GIGRPP VL F + R + +I N ++ LL R
Sbjct: 119 SQVIGTRDYLRVRLGIGRPPGRQDPADFVLKPFPTAARAEVELLIGNGCDAVELLVARSL 178
Query: 176 EDVSFLNH 183
ED H
Sbjct: 179 EDAQNTAH 186
>gi|326772329|ref|ZP_08231614.1| aminoacyl-tRNA hydrolase [Actinomyces viscosus C505]
gi|326638462|gb|EGE39363.1| aminoacyl-tRNA hydrolase [Actinomyces viscosus C505]
Length = 200
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 101/177 (57%), Gaps = 9/177 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLD-------G 53
++V GLGNPG Y NRHN+G+M +D + + KK A ++EG+L G
Sbjct: 5 WLVVGLGNPGTRYARNRHNVGYMVLDVLAECTGSRFSQHKKARARVAEGRLGMMSGGAPG 64
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
R IL +P MNLSG + ++++Y + LVIHD+LDL LRLK GGG+ GHN
Sbjct: 65 PRVILAEPSVLMNLSGGPVAGLVSYYGIDPASRLLVIHDELDLPAHELRLKRGGGEGGHN 124
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
GL+SIS+ K+Y RLR+GIGRPP VL +F ER L ++ A ++
Sbjct: 125 GLRSISKSVSTKDYARLRVGIGRPPGRQDPSDFVLSDFPGRERADLGVTLEQAADAV 181
>gi|240123071|ref|ZP_04736027.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID332]
gi|268681697|ref|ZP_06148559.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID332]
gi|268621981|gb|EEZ54381.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID332]
Length = 192
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 100/176 (56%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
+V GLGNPG EY + RHN GF +D + AWK KKF E++ L
Sbjct: 7 MVVGLGNPGKEYEQTRHNAGFWFLDEL-------AWKWKASFKEEKKFFGEVARAALPDG 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 60 DVWLLKPATFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 118
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I K G +Y RLR+GIG P D ++ +VL S+ R I D +A+SL
Sbjct: 119 LKDIQAKLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSAEHRR---QIDDAVAKSL 171
>gi|225850828|ref|YP_002731062.1| peptidyl-tRNA hydrolase [Persephonella marina EX-H1]
gi|259535217|sp|C0QQW6|PTH_PERMH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|225646680|gb|ACO04866.1| peptidyl-tRNA hydrolase [Persephonella marina EX-H1]
Length = 189
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 95/173 (54%), Gaps = 15/173 (8%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKF------HAEISEGQLDGLRTI 57
V GLGNPG +Y + RHN+GFM D + S KK+ H + E +
Sbjct: 5 VIGLGNPGKQYEDTRHNVGFMIADVVASLL---KCNKKYIERCFSHIYVCEDHY----LL 57
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
++KPQTFMN SG ++ ++ Y L + LV++DDLDL GT+RL+ G GH G++S
Sbjct: 58 IVKPQTFMNNSGVAVKNLLEDYDLKP-DEILVVYDDLDLPLGTVRLRKKGSSGGHRGIQS 116
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
I E + + R+++GIGRP ++ +VL F E+ L +I + A+ +
Sbjct: 117 IIESIKTDEFPRIKVGIGRPERKEQVVDYVLSPFKKEEKILLDKVISHTAQCI 169
>gi|309809618|ref|ZP_07703475.1| aminoacyl-tRNA hydrolase [Lactobacillus iners SPIN 2503V10-D]
gi|312874282|ref|ZP_07734314.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LEAF 2052A-d]
gi|312874834|ref|ZP_07734853.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LEAF 2053A-b]
gi|329920471|ref|ZP_08277203.1| aminoacyl-tRNA hydrolase [Lactobacillus iners SPIN 1401G]
gi|308170099|gb|EFO72135.1| aminoacyl-tRNA hydrolase [Lactobacillus iners SPIN 2503V10-D]
gi|311089579|gb|EFQ48004.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LEAF 2053A-b]
gi|311090155|gb|EFQ48567.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LEAF 2052A-d]
gi|328936147|gb|EGG32600.1| aminoacyl-tRNA hydrolase [Lactobacillus iners SPIN 1401G]
Length = 185
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 102/183 (55%), Gaps = 5/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM ID + K+KF + ++ G IL++
Sbjct: 1 MKLIVGLGNPGLKYQKTKHNTGFMAIDYYLKKNGLSFNKEKFEGFWIKTKIKGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++++F+K+ + + LVIHDD+D+ +RL+ G GHNG+KSI
Sbjct: 61 PQTYMNDSGKSVTQLVDFFKI-DAHDILVIHDDMDMPVAKIRLRKSGKSGGHNGIKSIIN 119
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
C + RL+IGI P ++ VL FSS + + +++ + + +
Sbjct: 120 -CLNDSEFNRLKIGIDHPTKET-VVSWVLTPFSSDDCIKMEATFATVSQIIDDFIDNKSI 177
Query: 179 SFL 181
FL
Sbjct: 178 EFL 180
>gi|309806980|ref|ZP_07700962.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LactinV 03V1-b]
gi|308166600|gb|EFO68797.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LactinV 03V1-b]
Length = 185
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 102/183 (55%), Gaps = 5/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM ID + K+KF + ++ G IL++
Sbjct: 1 MKLIVGLGNPGLKYQKTKHNTGFMAIDYYLKKNGLSFNKEKFEGFWIKTKIKGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++++F+K+ + + LVIHDD+D+ +RL+ G GHNG+KSI
Sbjct: 61 PQTYMNDSGKSVTQLVDFFKI-DAHDILVIHDDMDMPVAKIRLRKSGKSGGHNGIKSIIH 119
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
C + RL+IGI P ++ VL FSS + + +++ + + +
Sbjct: 120 -CLNDSEFNRLKIGIDHPTKET-VVSWVLTPFSSEDCTKMEATFATVSQIIDDFIDNKSI 177
Query: 179 SFL 181
FL
Sbjct: 178 EFL 180
>gi|28199876|ref|NP_780190.1| peptidyl-tRNA hydrolase [Xylella fastidiosa Temecula1]
gi|182682628|ref|YP_001830788.1| peptidyl-tRNA hydrolase [Xylella fastidiosa M23]
gi|32129853|sp|Q87A24|PTH_XYLFT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238691122|sp|B2IA78|PTH_XYLF2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|28057997|gb|AAO29839.1| peptidyl tRNA hydrolase [Xylella fastidiosa Temecula1]
gi|182632738|gb|ACB93514.1| Aminoacyl-tRNA hydrolase [Xylella fastidiosa M23]
gi|307578908|gb|ADN62877.1| peptidyl-tRNA hydrolase [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 192
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 94/171 (54%), Gaps = 3/171 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF +D + A + K A ++ + G L++P
Sbjct: 6 LIVGLGNPGSEYIKTRHNAGFRFVDGLVQREGQCWALESKLFAYVARVFIAGQWVWLLRP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ +NF+K+ E LV HD+LD G +RLK GG G NGL+ I++
Sbjct: 66 VTFMNLSGKSICAGLNFWKIKP-EQMLVAHDELDFPPGAVRLKFDGGHGGQNGLRDITKL 124
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G + RLR+GIG P ++ VLG + E + ++ + LPL
Sbjct: 125 LGHGRFHRLRVGIGHPGHKDRVVSWVLGCPTCDENIAIDAALERASVVLPL 175
>gi|6714302|gb|AAF25998.1|AC013354_17 F15H18.8 [Arabidopsis thaliana]
Length = 777
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 83/156 (53%), Gaps = 20/156 (12%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D + F A +G + + +L KP
Sbjct: 95 WLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKP 154
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFMNLSG+S ++DDLDL FG LRL GG GHNG++SI +
Sbjct: 155 QTFMNLSGES------------------VYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 196
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K +++ RLRIGIGRPP VL F+ E+
Sbjct: 197 LKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQ 232
>gi|296118211|ref|ZP_06836792.1| aminoacyl-tRNA hydrolase [Corynebacterium ammoniagenes DSM 20306]
gi|295968769|gb|EFG82013.1| aminoacyl-tRNA hydrolase [Corynebacterium ammoniagenes DSM 20306]
Length = 220
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 7/151 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH---FFPAWKKKFHAEISEGQLDGLRTIL 58
++V GLGNPG +Y RHN+G+M ID + + P K A E + G +L
Sbjct: 35 WLVVGLGNPGAKYAATRHNVGYMAIDDLLAETGDLVQPVHGHKLLAATVE--IAGHTVVL 92
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+P TFMNLSG+++ V + + + + +HD+LDL +RLK GG + GHNGLKS+
Sbjct: 93 ARPTTFMNLSGEAIGPVAEKLGI-SADRIIAVHDELDLPENKIRLKLGGNENGHNGLKSL 151
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLG 148
++ G ++Y R+RIGI RPP + I +VL
Sbjct: 152 TQHLGTRDYLRVRIGIARPPKGSSIPDYVLA 182
>gi|157736890|ref|YP_001489573.1| peptidyl-tRNA hydrolase [Arcobacter butzleri RM4018]
gi|167011989|sp|A8ESI0|PTH_ARCB4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157698744|gb|ABV66904.1| peptidyl-tRNA hydrolase [Arcobacter butzleri RM4018]
Length = 183
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 100/173 (57%), Gaps = 6/173 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M+++ GLGN G +Y RHN+GF+ ID + + F + + L +
Sbjct: 1 MYLIVGLGNIGEKYQYTRHNVGFLVIDEMAKNLQTSNVNNSNFQSTL----LKSGYNLFA 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG ++ + +YK+ +LEN +VIHDDLDL FGT++ K GGG GHNGLKS+
Sbjct: 57 KPTTYMNNSGVAVHSIKEYYKI-DLENIIVIHDDLDLPFGTVKFKIGGGHGGHNGLKSLD 115
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GK+Y R+RIGIG+P + + VL +FS E L II + ++ L
Sbjct: 116 SHIGKDYIRVRIGIGKPQNKDDVANFVLSDFSKEELNKLEDIIKHTINAIEAL 168
>gi|157165704|ref|YP_001466457.1| lipoprotein [Campylobacter concisus 13826]
Length = 159
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 95/166 (57%), Gaps = 11/166 (6%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
M ID + +F KF E+ + +G+ IL+KP TFMNLSGQS+ V +FYK
Sbjct: 1 MLIDLLKDSNFKDVSSAKFQGEVF--KFNGI--ILLKPTTFMNLSGQSVKAVRDFYKPDR 56
Query: 84 LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHII 143
+ +VIHDDLDL FG ++ K GG GHNG+KSI G +Y+R+R+GIG D +
Sbjct: 57 I---IVIHDDLDLSFGAVKFKKGGSSGGHNGIKSIDNLIGNDYERVRVGIGHEGDAKNF- 112
Query: 144 RHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVSVRK 189
VLG FS E+ L I+ ++ L K D++ ++ +V+K
Sbjct: 113 --VLGEFSDEEKKALDEILAYTKNAVCELLK-SDINEISQKFTVKK 155
>gi|294660594|ref|NP_853448.2| peptidyl-tRNA hydrolase [Mycoplasma gallisepticum str. R(low)]
gi|26398421|sp|Q8RLD7|PTH_MYCGA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|19699030|gb|AAL91134.1| peptidyl-tRNA hydrolase [Mycoplasma gallisepticum]
gi|284812257|gb|AAP57016.2| Peptidyl-tRNA hydrolase [Mycoplasma gallisepticum str. R(low)]
gi|284930946|gb|ADC30885.1| Peptidyl-tRNA hydrolase [Mycoplasma gallisepticum str. R(high)]
gi|284931701|gb|ADC31639.1| Peptidyl-tRNA hydrolase [Mycoplasma gallisepticum str. F]
Length = 183
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 94/164 (57%), Gaps = 17/164 (10%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT---- 56
M ++ GLGNPG EY RHNIGF ID++ + E+++ Q +GL
Sbjct: 1 MKLIVGLGNPGFEYEHTRHNIGFKIIDKLLDV---------LNLELNKSQFNGLYVKHDD 51
Query: 57 -ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
I+ KP T+MNLSG + +++NFYK+ +++ LVIHD+L + G +RLK G G G+
Sbjct: 52 FIIAKPLTYMNLSGNFIRQLVNFYKIQ-IDDILVIHDELAFNLGVVRLKQNGSANGQKGV 110
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+I + G +N+KRLR+GI + D +I VL F+ E L
Sbjct: 111 ANIISQLGTQNFKRLRVGI-KNEDLKNIASFVLSKFAPNELILL 153
>gi|291320749|ref|YP_003516014.1| peptidyl tRNA hydrolase [Mycoplasma agalactiae]
gi|290753085|emb|CBH41061.1| Peptidyl tRNA hydrolase [Mycoplasma agalactiae]
Length = 188
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 102/184 (55%), Gaps = 12/184 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAE--ISEGQLDGLRTIL 58
M ++ GLGNPG+EY RHN GF+ ID+I K+KF+ E +S+G IL
Sbjct: 1 MKLIVGLGNPGNEYRFTRHNAGFLAIDKICEKLNISLNKEKFNGEFVVSDG------FIL 54
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
KP T+MN SG + + +FYK+ N + +VI+DDL G +K GG AGH G+ S+
Sbjct: 55 AKPLTYMNKSGDFVYSIASFYKI-NPSDIIVIYDDLSFSIGQAAIKIGGSSAGHKGIDSL 113
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
K N +KR+R+GIG T I +VL F+ E + +++ +A + L D
Sbjct: 114 MSKFSSNDFKRIRVGIGVNSGTT-IKDYVLSLFTKDEMIVVEEVLEKVADAAISLV-YND 171
Query: 178 VSFL 181
V+F+
Sbjct: 172 VNFV 175
>gi|154487168|ref|ZP_02028575.1| hypothetical protein BIFADO_01008 [Bifidobacterium adolescentis
L2-32]
gi|154085031|gb|EDN84076.1| hypothetical protein BIFADO_01008 [Bifidobacterium adolescentis
L2-32]
Length = 199
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 93/163 (57%), Gaps = 10/163 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD----GLRTI 57
+++AGLGNPG +Y RHN+GFM D + K A + +G ++ ++
Sbjct: 6 WLIAGLGNPGSKYEGTRHNMGFMTADVLAERWSVNFSDHKGLAMLGKGVMNLSGRNVKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SG ++ + +Y++ ++ +VIHDD+DLDFG +++K GG GHNG+KS
Sbjct: 66 LAKPLTYMNESGNAVASISAYYQIEP-DHIVVIHDDMDLDFGRIKVKAGGSAGGHNGIKS 124
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAH----IIRHVLGNFSSPER 155
I G + Y R+R+G+G AH + VLG F +R
Sbjct: 125 IDRSLGTSKYARVRMGVGHAQRGAHAHDNTVNWVLGGFGPDQR 167
>gi|59800823|ref|YP_207535.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae FA 1090]
gi|194098115|ref|YP_002001163.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae NCCP11945]
gi|239998571|ref|ZP_04718495.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae 35/02]
gi|240013696|ref|ZP_04720609.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae DGI18]
gi|240016136|ref|ZP_04722676.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae FA6140]
gi|240080278|ref|ZP_04724821.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae FA19]
gi|240112490|ref|ZP_04726980.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae MS11]
gi|240115230|ref|ZP_04729292.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID18]
gi|240117517|ref|ZP_04731579.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID1]
gi|240120765|ref|ZP_04733727.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID24-1]
gi|240125323|ref|ZP_04738209.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae SK-92-679]
gi|240127775|ref|ZP_04740436.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae SK-93-1035]
gi|254493292|ref|ZP_05106463.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae 1291]
gi|260440952|ref|ZP_05794768.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae DGI2]
gi|268594430|ref|ZP_06128597.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae 35/02]
gi|268596426|ref|ZP_06130593.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae FA19]
gi|268598557|ref|ZP_06132724.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae MS11]
gi|268600910|ref|ZP_06135077.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID18]
gi|268603216|ref|ZP_06137383.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID1]
gi|268683924|ref|ZP_06150786.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae SK-92-679]
gi|268686167|ref|ZP_06153029.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae SK-93-1035]
gi|291044280|ref|ZP_06569989.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae DGI2]
gi|293399472|ref|ZP_06643625.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae F62]
gi|68052868|sp|Q5F9L4|PTH_NEIG1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238690184|sp|B4RK78|PTH_NEIG2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|59717718|gb|AAW89123.1| putative peptidyl-tRNA hydrolase [Neisseria gonorrhoeae FA 1090]
gi|193933405|gb|ACF29229.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae NCCP11945]
gi|226512332|gb|EEH61677.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae 1291]
gi|268547819|gb|EEZ43237.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae 35/02]
gi|268550214|gb|EEZ45233.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae FA19]
gi|268582688|gb|EEZ47364.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae MS11]
gi|268585041|gb|EEZ49717.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID18]
gi|268587347|gb|EEZ52023.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID1]
gi|268624208|gb|EEZ56608.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae SK-92-679]
gi|268626451|gb|EEZ58851.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae SK-93-1035]
gi|291011174|gb|EFE03170.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae DGI2]
gi|291610041|gb|EFF39163.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae F62]
gi|317163845|gb|ADV07386.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 192
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 100/176 (56%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
+V GLGNPG EY + RHN GF +D + AWK KKF E++ L
Sbjct: 7 MVVGLGNPGKEYEQTRHNAGFWFLDEL-------AWKWKASFKEEKKFFGEVARAALPDG 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 60 DVWLLKPATFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 118
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I K G +Y RLR+GIG P D ++ +VL S+ R I D +A+SL
Sbjct: 119 LKDIQAKLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSAEHRR---QIDDAVAKSL 171
>gi|88808009|ref|ZP_01123520.1| peptidyl-tRNA hydrolase [Synechococcus sp. WH 7805]
gi|88788048|gb|EAR19204.1| peptidyl-tRNA hydrolase [Synechococcus sp. WH 7805]
Length = 201
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 101/189 (53%), Gaps = 8/189 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG Y RHN+GF ++++ + H K +++ R L+ P
Sbjct: 1 MVVGLGNPGDRYASTRHNVGFRVLEQLAAQEHARFRAMAKLQGDLANIGAGPDRLRLLMP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+TFMN SG+S+ ++++ L +L +V+ DD+DL G LRL+ G GHNGLKS +
Sbjct: 61 KTFMNESGRSIRATLDWFGL-SLGQVIVLVDDMDLPLGRLRLRARGSAGGHNGLKSTIQH 119
Query: 122 CG-KNYKRLRIGIGRPPDT-----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G +++ RLRIGIG P + A + HVLG FS E L ++ + L + ++
Sbjct: 120 LGTQDFARLRIGIGAPGRSPEERRARTVSHVLGAFSREEEPLLNEVLKEVLSGLERIQRQ 179
Query: 176 EDVSFLNHI 184
NHI
Sbjct: 180 GLERAGNHI 188
>gi|15676693|ref|NP_273837.1| peptidyl-tRNA hydrolase [Neisseria meningitidis MC58]
gi|121634588|ref|YP_974833.1| peptidyl-tRNA hydrolase [Neisseria meningitidis FAM18]
gi|254804673|ref|YP_003082894.1| Peptidyl-tRNA hydrolase [Neisseria meningitidis alpha14]
gi|14195080|sp|Q9K029|PTH_NEIMB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229428|sp|A1KT53|PTH_NEIMF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|7226028|gb|AAF41208.1| peptidyl-tRNA hydrolase [Neisseria meningitidis MC58]
gi|120866294|emb|CAM10035.1| putative peptidyl-tRNA hydrolase [Neisseria meningitidis FAM18]
gi|254668215|emb|CBA04985.1| Peptidyl-tRNA hydrolase [Neisseria meningitidis alpha14]
gi|316983787|gb|EFV62768.1| peptidyl-tRNA hydrolase [Neisseria meningitidis H44/76]
gi|325131972|gb|EGC54671.1| peptidyl-tRNA hydrolase [Neisseria meningitidis M6190]
gi|325137803|gb|EGC60378.1| peptidyl-tRNA hydrolase [Neisseria meningitidis ES14902]
gi|325140052|gb|EGC62581.1| peptidyl-tRNA hydrolase [Neisseria meningitidis CU385]
gi|325200521|gb|ADY95976.1| peptidyl-tRNA hydrolase [Neisseria meningitidis H44/76]
Length = 192
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 100/176 (56%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
+V GLGNPG EY + RHN GF +D + AWK KKF E++ L
Sbjct: 7 MVVGLGNPGKEYEQTRHNAGFWFLDEL-------AWKWKASFKEEKKFFGEVARAALPDG 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 60 DVWLLKPATFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 118
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I K G +Y RLR+GIG P D ++ +VL S+ R I D +A+SL
Sbjct: 119 LKDIQAKLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRR---QIDDAVAKSL 171
>gi|242056565|ref|XP_002457428.1| hypothetical protein SORBIDRAFT_03g007130 [Sorghum bicolor]
gi|241929403|gb|EES02548.1| hypothetical protein SORBIDRAFT_03g007130 [Sorghum bicolor]
Length = 256
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 92/156 (58%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG++Y RHN+GF +DRI + + + G + + +++KP
Sbjct: 62 WLIAGLGNPGNKYYGTRHNVGFEMVDRIAGEEGITMNTIQSKSLLGIGSIGEVPVLVVKP 121
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q++MN SG+++ + +Y++P L + L+I+DD+ L G LRL+ GG HNGL+++ E
Sbjct: 122 QSYMNYSGEAIGPLAAYYQVP-LRHILLIYDDMSLPNGVLRLQKKGGHGRHNGLQNVIEN 180
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + RL IGIG PP +L FSS ER
Sbjct: 181 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEER 216
>gi|220912061|ref|YP_002487370.1| peptidyl-tRNA hydrolase [Arthrobacter chlorophenolicus A6]
gi|254783850|sp|B8HFE2|PTH_ARTCA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219858939|gb|ACL39281.1| Aminoacyl-tRNA hydrolase [Arthrobacter chlorophenolicus A6]
Length = 196
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 107/174 (61%), Gaps = 4/174 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTILI 59
+++ GLGNPG +Y NRHN+G M +D + K A++ EG+L G R +L
Sbjct: 5 WLIVGLGNPGAQYQGNRHNVGQMVLDELAGRVGAGFKSHKARAQVVEGRLGIGGPRVVLA 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN+SG + + NFY + + ++ + +HD++D+ F T++LK GGG+ GHNGL+ IS
Sbjct: 65 KPMTYMNVSGGPVSALANFYGI-SPDHVVAVHDEIDIPFNTVKLKIGGGEGGHNGLRDIS 123
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ K+Y R+R+G+GRPP +VL +F + E L ++D A ++ LL
Sbjct: 124 KALATKDYLRVRVGVGRPPGRMDTADYVLRDFGTAELKELPFLLDEAADAVELL 177
>gi|119477474|ref|ZP_01617665.1| peptidyl-tRNA hydrolase [marine gamma proteobacterium HTCC2143]
gi|119449400|gb|EAW30639.1| peptidyl-tRNA hydrolase [marine gamma proteobacterium HTCC2143]
Length = 212
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY E RHN G + ++ + H + KF Q+D L+ P
Sbjct: 24 LIVGLGNPGREYEETRHNAGAIFVNELARQHGCALKIETKFFGVTGRLQIDDDDVRLLIP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ++ + FYK+P E LV HD+LD+D GT R K GGG GHNGL+ I +
Sbjct: 84 TTFMNRSGQAVAAMCQFYKVP-FEEILVAHDELDIDAGTARFKQGGGHGGHNGLRDIIAR 142
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G KN+ RLRIGIG P + +VL + E + IID R+LP K +
Sbjct: 143 NGNNKNFHRLRIGIGHPGSADKVTGYVLNKAPAAEYRKMEDIIDEAIRALPDAIKGDWSK 202
Query: 180 FLNHI 184
+N++
Sbjct: 203 AMNYL 207
>gi|294786765|ref|ZP_06752019.1| aminoacyl-tRNA hydrolase [Parascardovia denticolens F0305]
gi|315226388|ref|ZP_07868176.1| aminoacyl-tRNA hydrolase [Parascardovia denticolens DSM 10105]
gi|294485598|gb|EFG33232.1| aminoacyl-tRNA hydrolase [Parascardovia denticolens F0305]
gi|315120520|gb|EFT83652.1| aminoacyl-tRNA hydrolase [Parascardovia denticolens DSM 10105]
Length = 199
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 93/164 (56%), Gaps = 12/164 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG--QLDGLRTI-- 57
+++ GLGNPG +Y RHN+GFMC D + K A +G L G RT+
Sbjct: 5 WLIVGLGNPGKKYEGTRHNMGFMCADLLSQRWSVSLSDHKGLALSGKGIMSLSG-RTVKF 63
Query: 58 -LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
L KP TFMN SG ++ + ++Y + ++ +VIHDD+DLDFG +++K GG GHNG+K
Sbjct: 64 FLAKPMTFMNDSGTAVASLCSYYGI-GADHVVVIHDDMDLDFGRIKVKQGGSAGGHNGIK 122
Query: 117 SISEKCG-KNYKRLRIGIGRPPDTA----HIIRHVLGNFSSPER 155
SI G ++Y R+R+GIG A I VLG F ++
Sbjct: 123 SIDRSLGTQDYYRVRLGIGHAQRGAAAHDKTIDWVLGGFKGSQK 166
>gi|332140912|ref|YP_004426650.1| peptidyl-tRNA hydrolase [Alteromonas macleodii str. 'Deep ecotype']
gi|238693243|sp|B4RT72|PTH_ALTMD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|327550934|gb|AEA97652.1| peptidyl-tRNA hydrolase [Alteromonas macleodii str. 'Deep ecotype']
Length = 193
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 96/177 (54%), Gaps = 5/177 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G ++++ + P + KF + + +DG L+ P
Sbjct: 6 LIVGLGNPGPEYENTRHNAGEWFLNQLADTYNAPLKPETKFFGKTARITIDGKDIRLLYP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ++ + NFY++ E LV D+LDL G + K GG + NG++ I +
Sbjct: 66 TTFMNKSGQAVAALANFYRI-EPEQILVAFDELDLPPGVAKYKVGGSSS-QNGVRDIVAR 123
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G KN+ RLRIGIG P + + HVLG S+ E+ + ID R +L K +
Sbjct: 124 MGNNKNFLRLRIGIGHPGHKSRVTGHVLGKPSAEEKTAIESAIDEAVRCTEILLKED 180
>gi|294055119|ref|YP_003548777.1| peptidyl-tRNA hydrolase [Coraliomargarita akajimensis DSM 45221]
gi|293614452|gb|ADE54607.1| peptidyl-tRNA hydrolase [Coraliomargarita akajimensis DSM 45221]
Length = 200
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTIL 58
+ ++AGLGNPG Y RHNIGF +D++ + WK+ + AEI+ + +L
Sbjct: 3 IAVIAGLGNPGLGYRNTRHNIGFDVVDQL-ALRAGAGWKREARLDAEIAAIHHAERKIML 61
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MN SG+SL V+ + +L N L+I+DD+ L G +L G GHNG+ I
Sbjct: 62 VKPTTYMNGSGRSLAAVLRYRQLEP-RNLLIIYDDITLTLGRAKLSHSGSAGGHNGVSDI 120
Query: 119 SEKCGKNYKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFL 158
++ G + R RIGIG P+ + +VL FS+ E+ L
Sbjct: 121 LDRVGGGFNRYRIGIGAKPNKEMDLADYVLSKFSNDEKSLL 161
>gi|292493879|ref|YP_003529318.1| peptidyl-tRNA hydrolase [Nitrosococcus halophilus Nc4]
gi|291582474|gb|ADE16931.1| peptidyl-tRNA hydrolase [Nitrosococcus halophilus Nc4]
Length = 196
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH---SFHFFPAWKKKFHAEISEGQLDGLRTIL 58
+++ GLGNPG +Y + RHN+GF ID F PA KF + + G +L
Sbjct: 9 WLLVGLGNPGAKYAQTRHNVGFWWIDTFAKGLDTDFKPA--AKFFGDFARVSWCGQNLLL 66
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP TFMN SGQ++L ++N+Y+LP LE+ L+IHDDLDL G +LK GG GHNGL+ I
Sbjct: 67 LKPTTFMNRSGQAVLALLNYYQLP-LEHLLIIHDDLDLPPGGAKLKRNGGHGGHNGLRDI 125
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G +++ RLR+GIG P ++ +VL S+ ++ + I LP
Sbjct: 126 INCLGRRDFLRLRLGIGHPGSGQDVVNYVLNRPSAADQRAIEAAITGALEVLP 178
>gi|40889731|pdb|1RYM|A Chain A, Structure Of The Group Ii Intron Splicing Factor Crs2
Length = 212
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 93/156 (59%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG++Y RHN+GF +DRI + ++ + + G + + +++KP
Sbjct: 18 WLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTEQSKSLLGIGSIGEVPVLVVKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q++MN SG+++ + +Y++P L + L+I+DD L G LRL+ GG HNGL+++ E
Sbjct: 78 QSYMNYSGEAIGPLAAYYQVP-LRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEH 136
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + RL IGIG PP +L FSS ER
Sbjct: 137 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEER 172
>gi|227487911|ref|ZP_03918227.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227542551|ref|ZP_03972600.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51866]
gi|227092117|gb|EEI27429.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227181749|gb|EEI62721.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51866]
Length = 187
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 102/181 (56%), Gaps = 15/181 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA------WK--KKFHAEISEGQLDG 53
F+V GLGNPG Y RHNIGF+ D + P WK K A ++E G
Sbjct: 5 FLVVGLGNPGATYELTRHNIGFLAADEVAD-ALAPVYVGGSNWKVVSKMRAVLAEESRGG 63
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
+ ++ KPQT MNLSG+++ + FY +P +VIHD+L+ DFG++ K GGG GHN
Sbjct: 64 AKVLVAKPQTMMNLSGEAVGLISRFYSIPP-SRVIVIHDELERDFGSVETKIGGGFGGHN 122
Query: 114 GLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER----YFLLPIIDNIARS 168
GLKSI++ ++ R+R+GIGRPP +VL FS+ E+ + + D ++R
Sbjct: 123 GLKSIAQHLKTPDFARVRVGIGRPPGRMRPADYVLQKFSAKEQTELPFICADVEDAVSRW 182
Query: 169 L 169
L
Sbjct: 183 L 183
>gi|269302742|gb|ACZ32842.1| peptidyl-tRNA hydrolase [Chlamydophila pneumoniae LPCoLN]
Length = 180
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 89/156 (57%), Gaps = 5/156 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILIK 60
++ +GNPGH Y RHN GF+ DR+ P +K K HA ++ + + IK
Sbjct: 4 LIVAIGNPGHGYANTRHNAGFLLADRLVEELQGPPFKPLSKCHALMTLVESSSGPLVFIK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TF+NLSG++++ ++ + L + LV+ DD++ FG LRL GG GHNGLKSI+
Sbjct: 64 PTTFVNLSGKAVVLAKKYFNVA-LSHILVLADDVNRSFGKLRLCFNGGSGGHNGLKSITA 122
Query: 121 KCGKN-YKRLRIGIGRP-PDTAHIIRHVLGNFSSPE 154
G N Y +LR G+GRP + + VLG FS E
Sbjct: 123 SLGSNEYWQLRFGVGRPLEEGVELSNFVLGKFSEEE 158
>gi|315656037|ref|ZP_07908935.1| aminoacyl-tRNA hydrolase [Mobiluncus curtisii ATCC 51333]
gi|315490101|gb|EFU79728.1| aminoacyl-tRNA hydrolase [Mobiluncus curtisii ATCC 51333]
Length = 222
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 17/188 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID----------RIHSFHFFPAWKKKFHAEISEGQL 51
++V GLGNPG +Y RHN G M D R S + + G +
Sbjct: 21 WLVVGLGNPGDKYAGTRHNCGSMVTDCFVKQSGQTYRNQSLARAGVVARVATVSLGYG-V 79
Query: 52 DGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG 111
D + I+ ++MN SG + E++++Y+L + + LVIHD+LDL+ G ++LK GG D G
Sbjct: 80 DAPKIIVAHTGSYMNESGPGVKELLDYYRLGS-DRLLVIHDELDLEMGYVKLKVGGSDGG 138
Query: 112 HNGLKSISEKCG-KNYKRLRIGIGRPPDTA----HIIRHVLGNFSSPERYFLLPIIDNIA 166
HNGLKSI + G K++ RLRIGIGRP +I VLG ++ L ++D
Sbjct: 139 HNGLKSIQKALGTKDFARLRIGIGRPVKMPGGGFDVINWVLGRIPKSQQTILDEVLDRAV 198
Query: 167 RSLPLLAK 174
+ + +A+
Sbjct: 199 QCVTDIAE 206
>gi|124010549|ref|ZP_01695177.1| peptidyl-tRNA hydrolase [Microscilla marina ATCC 23134]
gi|123982280|gb|EAY23847.1| peptidyl-tRNA hydrolase [Microscilla marina ATCC 23134]
Length = 188
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 92/163 (56%), Gaps = 2/163 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGN G EY RHNIGF+ +D + P + A +E + G LIKP
Sbjct: 3 YLIAGLGNIGAEYELTRHNIGFLVLDHLADKQGAPDFSTHKLAMKTEFKHKGRTFHLIKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + K+P EN LVI DD+ L LRL+ G D GHNGLK+I E
Sbjct: 63 TTYMNLSGKAINYWLQELKIPR-ENLLVIVDDIALPHAKLRLRGKGSDGGHNGLKNIQEV 121
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G + Y R+R G+G + +++VL NF+ + L +D
Sbjct: 122 LGNSQYARIRFGVGNDFNKGEQVKYVLANFNKEQLDTLTEPMD 164
>gi|302388385|ref|YP_003824207.1| peptidyl-tRNA hydrolase [Clostridium saccharolyticum WM1]
gi|302199013|gb|ADL06584.1| peptidyl-tRNA hydrolase [Clostridium saccharolyticum WM1]
Length = 188
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNP EY + RHN+GF +D + +KK A G++ + IL K
Sbjct: 1 MYIIAGLGNPTREYEKTRHNVGFEAVDILADKLGARVTEKKHRAFCGTGRIGPEKVILSK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ + +FYK+ + ++I DD++L G LR++T G GHNGLK+I
Sbjct: 61 PQTFMNLSGESIRAMADFYKVEPD-HIIIICDDINLAEGQLRIRTKGSAGGHNGLKNIIN 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+G+G P + +VLG F + + + A + ++ +
Sbjct: 120 HLGTQEFSRIRVGVGEKPKEMDLADYVLGRFPREQEGVMDQAYQDAAEAAIMMVTEGAEA 179
Query: 180 FLN 182
+N
Sbjct: 180 AMN 182
>gi|94500014|ref|ZP_01306549.1| peptidyl-tRNA hydrolase [Oceanobacter sp. RED65]
gi|94427872|gb|EAT12847.1| peptidyl-tRNA hydrolase [Oceanobacter sp. RED65]
Length = 195
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 90/158 (56%), Gaps = 8/158 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY RHN G ++ + + P +KKFH + Q+ G L+
Sbjct: 7 LIVGLGNPGSEYENTRHNAGAWLLNEVARRYGVQLKP--EKKFHGLCGKAQIKGQDVFLL 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMN SGQ++ + NFYK+P + LV+HD+LDL G R K GGG G NGLK I
Sbjct: 65 FPTTFMNRSGQAVQALANFYKIP-VNQILVVHDELDLPSGIARFKQGGGHGGQNGLKDII 123
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K KN+ RLRIGIG P D + HVLG + E+
Sbjct: 124 SKMANDKNFYRLRIGIGHPGDKTKVTGHVLGKPNKDEQ 161
>gi|325134060|gb|EGC56715.1| peptidyl-tRNA hydrolase [Neisseria meningitidis M13399]
Length = 192
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 100/176 (56%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
+V GLGNPG EY + RHN GF +D + AWK KKF E++ L
Sbjct: 7 MVVGLGNPGKEYEQTRHNAGFWFLDEL-------AWKWKASFKEEKKFFGEVARATLPDG 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 60 DVWLLKPTTFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 118
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I K G +Y RLR+GIG P D ++ +VL S+ R I D +A+SL
Sbjct: 119 LKDIQAKLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRR---QIDDAVAKSL 171
>gi|218767913|ref|YP_002342425.1| peptidyl-tRNA hydrolase [Neisseria meningitidis Z2491]
gi|14195079|sp|Q9JV42|PTH_NEIMA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|121051921|emb|CAM08227.1| putative peptidyl-tRNA hydrolase [Neisseria meningitidis Z2491]
gi|319410161|emb|CBY90497.1| peptidyl-tRNA hydrolase (PTH) [Neisseria meningitidis WUE 2594]
Length = 192
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 100/176 (56%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
+V GLGNPG EY + RHN GF +D + AWK KKF E++ L
Sbjct: 7 MVVGLGNPGKEYEQTRHNAGFWFLDEL-------AWKWKASFKEEKKFFGEVARATLPDG 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 60 DVWLLKPTTFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 118
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I K G +Y RLR+GIG P D ++ +VL S+ R I D +A+SL
Sbjct: 119 LKDIQAKLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRR---QIDDAVAKSL 171
>gi|50955305|ref|YP_062593.1| peptidyl-tRNA hydrolase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|68052929|sp|Q6ADQ8|PTH_LEIXX RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|50951787|gb|AAT89488.1| peptidyl-tRNA hydrolase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 193
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTIL 58
+++V GLGNPG Y RHN+G + +D + S K +A ++EG++ G R +L
Sbjct: 4 LWLVVGLGNPGPGYAATRHNVGQLVLDELASRDRLSFKTHKTNATVAEGRIVPGGPRFVL 63
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
KP T+MN SG + +++ FY L +V+ D+LD+ F TLRLK GGG GHNG++ +
Sbjct: 64 AKPNTYMNGSGGPVSQLLRFYSL-EPSRLIVVQDELDIPFDTLRLKFGGGHGGHNGVRDV 122
Query: 119 SEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
+ G ++ R+R+G+GRPP HVL FS+ ER L ++ + A ++ +A
Sbjct: 123 IAEVGSGDFTRVRVGVGRPPGVQAAADHVLKGFSAAERKNLPILVADAADAVERIA 178
>gi|251772228|gb|EES52798.1| Aminoacyl-tRNA hydrolase [Leptospirillum ferrodiazotrophum]
Length = 185
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 3/163 (1%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
V GLGNPG++Y RHN G + +D + S P KK+ EG G R L+ P+T
Sbjct: 5 VIGLGNPGNDYEGTRHNAGKILLDHVSSLSGIPLEKKQGEIRFGEGVWRGERVYLVFPET 64
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
FMNLSG+ ++ + + + + ++L++ DDLD FG +R + GG G G++SI + G
Sbjct: 65 FMNLSGR-VVPWLRLHGVESPSDWLILSDDLDTPFGMVRFREKGGSGGQRGIRSILQAAG 123
Query: 124 KNY-KRLRIGIGRPPDT-AHIIRHVLGNFSSPERYFLLPIIDN 164
R++ GIGRP A I ++VL F+ ER + ++ N
Sbjct: 124 SEAIARVKFGIGRPIQIGADISQYVLSPFTREERLRIPELLQN 166
>gi|78211817|ref|YP_380596.1| peptidyl-tRNA hydrolase [Synechococcus sp. CC9605]
gi|119391029|sp|Q3AMZ1|PTH_SYNSC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78196276|gb|ABB34041.1| peptidyl-tRNA hydrolase [Synechococcus sp. CC9605]
Length = 205
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 94/170 (55%), Gaps = 8/170 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHNIGFM ++ + F + K H ++ + R L+ P
Sbjct: 7 LVVGLGNPGAKYAGTRHNIGFMALELLGERSGFSFRQQAKLHGLAADTGVGEQRLRLLMP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+++ ++++ L LV+ DD+DL G LRL+ G GHNGL+S +
Sbjct: 67 QTYMNDSGRAIRAALDWFGL-EPHQLLVLVDDMDLPLGRLRLRAQGSAGGHNGLRSTIQH 125
Query: 122 CG-KNYKRLRIGIGRPPDT-----AHIIRHVLGNFSSPERYFLLPIIDNI 165
G + + RLRIGIG P + + HVLG FS E+ + ++D +
Sbjct: 126 LGTQAFPRLRIGIGAPAENPAERRVRTVSHVLGPFSKVEQPCVGAVLDAV 175
>gi|145219565|ref|YP_001130274.1| peptidyl-tRNA hydrolase [Prosthecochloris vibrioformis DSM 265]
gi|189038158|sp|A4SE63|PTH_PROVI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145205729|gb|ABP36772.1| peptidyl-tRNA hydrolase [Chlorobium phaeovibrioides DSM 265]
Length = 190
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 5/158 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP Y RHNIGF ++ + + P K K +++ + G + +L+K
Sbjct: 1 MKLIIGLGNPEARYSNTRHNIGFEAVEALAAAFGAPFSKGKGKYLVAKIRHRGEQLMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG +++ MNF+K + LVI DD++L GTLRL++ G G NGLK I E
Sbjct: 61 PMTYMNLSGHAVVAAMNFHKALR-SDILVICDDMNLPSGTLRLRSKGSAGGQNGLKHIIE 119
Query: 121 KCG-KNYKRLRIGIG--RPPDTAHIIRHVLGNFSSPER 155
G + + RLRIGIG P + VLG FS+ ER
Sbjct: 120 SLGSEEFARLRIGIGLEEKPQGGY-SSFVLGKFSTDER 156
>gi|148378009|ref|YP_001256885.1| peptidyl-tRNA hydrolase [Mycoplasma agalactiae PG2]
gi|238686694|sp|A5IZI8|PTH_MYCAP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148292055|emb|CAL59447.1| Peptidyl tRNA hydrolase [Mycoplasma agalactiae PG2]
Length = 188
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 101/182 (55%), Gaps = 8/182 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG+EY RHN GF+ ID+I K+KF+ E + DG IL K
Sbjct: 1 MKLIVGLGNPGNEYRFTRHNAGFLAIDKICEKLNISLNKEKFNGEFAVS--DGF--ILAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG + + +FYK+ N + +VI+DDL G +K GG AGH G++ +
Sbjct: 57 PLTYMNKSGDFVYSIASFYKI-NPSDIIVIYDDLSFSIGQAAIKIGGSSAGHKGIERLMS 115
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K N +KR+R+GIG T I +VL F+ E + +++ +A + L DV+
Sbjct: 116 KFSSNDFKRIRVGIGVNSGTT-IKDYVLSLFTKDEMIVVEEVLEKVADAAISLV-YNDVN 173
Query: 180 FL 181
F+
Sbjct: 174 FV 175
>gi|119025661|ref|YP_909506.1| peptidyl-tRNA hydrolase [Bifidobacterium adolescentis ATCC 15703]
gi|166199308|sp|A1A141|PTH_BIFAA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118765245|dbj|BAF39424.1| peptidyl-tRNA hydrolase [Bifidobacterium adolescentis ATCC 15703]
Length = 199
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 92/163 (56%), Gaps = 10/163 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD----GLRTI 57
+++AGLGNPG +Y RHN+GFM D + K A + +G ++ ++
Sbjct: 6 WLIAGLGNPGSKYEGTRHNMGFMTADVLAERWSVNFSDHKGLAMLGKGVMNLSGRNVKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SG ++ + +Y++ ++ +VIHDD+DLDFG +++K GG GHNG+KS
Sbjct: 66 LAKPLTYMNESGNAVASISAYYQI-EPDHIVVIHDDMDLDFGRIKVKAGGSAGGHNGIKS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDTAH----IIRHVLGNFSSPER 155
I G Y R+R+G+G AH + VLG F +R
Sbjct: 125 IDRSLGTPKYARVRMGVGHAQRGAHAHDNTVNWVLGGFGPDQR 167
>gi|309804621|ref|ZP_07698686.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LactinV 09V1-c]
gi|308166013|gb|EFO68231.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LactinV 09V1-c]
Length = 185
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 102/183 (55%), Gaps = 5/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM ID + K+KF + ++ G IL++
Sbjct: 1 MKLIVGLGNPGLKYQKTKHNTGFMAIDYYLKKNGLSFNKEKFEGFWIKTKIKGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++++F+K+ + + LVIHDD+D+ +RL+ G GHNG+KSI
Sbjct: 61 PQTYMNDSGKSVTQLVDFFKI-DAHDILVIHDDMDMPVAKIRLRKSGKSGGHNGIKSIIH 119
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
C + RL+IGI P ++ VL FSS + + +++ + + +
Sbjct: 120 -CLNDSEFNRLKIGIDHPTKET-VVSWVLTPFSSDDCIKMEATFVTVSQIIDDFIDNKSI 177
Query: 179 SFL 181
FL
Sbjct: 178 EFL 180
>gi|50364892|ref|YP_053317.1| peptidyl-tRNA hydrolase [Mesoplasma florum L1]
gi|68052954|sp|Q6F240|PTH_MESFL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|50363448|gb|AAT75433.1| peptidyl-tRNA hydrolase [Mesoplasma florum L1]
Length = 186
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN G++ +D++ + F K + ++ I ++ + + +K
Sbjct: 1 MKLIVGLGNYGSQYEATRHNAGWIALDQLIEKYGFTQQKNEHNSIIFFSTVNNEKVLFVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG ++ +M++YK+ +++ +++HD+ D G + K G AGHNG+KS+ +
Sbjct: 61 PQTYMNNSGIAIQAIMHYYKIE-IKDLVILHDEKDFPVGKNQFKMNGSAAGHNGIKSVIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +N+ R RIGIG+P II VL F E
Sbjct: 120 YLGTQNFNRYRIGIGQPEQGWKIIDWVLSKFKPEE 154
>gi|325969879|ref|YP_004246070.1| peptidyl-tRNA hydrolase [Spirochaeta sp. Buddy]
gi|324025117|gb|ADY11876.1| Peptidyl-tRNA hydrolase [Spirochaeta sp. Buddy]
Length = 176
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 99/166 (59%), Gaps = 15/166 (9%)
Query: 7 LGNPGHEYCENRHNIGFMCIDRIHSFHFFP--AWKKKFHAEISEGQLDGLRTILIKPQTF 64
LGNPG Y RHNIG+M + H +P +W +KFH +S L L+KP T+
Sbjct: 8 LGNPGKAYARTRHNIGWMVAE-----HLYPNQSWSEKFHGLVS----TALTLKLLKPTTY 58
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK 124
MN SG+S+ M+FY + E LVIHDDL+L +GTLRL+ GGG GHNGLKSI
Sbjct: 59 MNESGRSVRACMDFYGY-SAEEILVIHDDLELPYGTLRLQKGGGLGGHNGLKSIKAHAQS 117
Query: 125 N-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ + RLRIGIGRP + + VL F+S E LP++ N+A +
Sbjct: 118 DQFSRLRIGIGRPVHGS-VASFVLERFTSDEE-ISLPLVINLAEKM 161
>gi|313668725|ref|YP_004049009.1| peptidyl-tRNA hydrolase [Neisseria lactamica ST-640]
gi|313006187|emb|CBN87649.1| putative peptidyl-tRNA hydrolase [Neisseria lactamica 020-06]
Length = 192
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 100/176 (56%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
+V GLGNPG EY + RHN GF +D + AWK KKF E++ L
Sbjct: 7 MVVGLGNPGKEYEQTRHNAGFWFLDEL-------AWKWKASFKEEKKFFGEVARAALPDG 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 60 DVWLLKPATFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 118
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I + G +Y RLR+GIG P D ++ +VL S+ R I D IA+SL
Sbjct: 119 LKDIQARLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSAEHRR---QIDDAIAKSL 171
>gi|119390922|sp|Q3ARM4|PTH_CHLCH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 190
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 88/157 (56%), Gaps = 3/157 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGF D + + H K+K ++ +L +IK
Sbjct: 1 MKLIIGLGNPGTEYDGTRHNIGFAVADALAAHHNASFSKEKGRYLSAKIKLGSESVGIIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG +++ MNFYK+ E +VI DDL+L GT+RL+ G G NGLK I E
Sbjct: 61 PMTYMNHSGHAVVAAMNFYKVARTE-IVVICDDLNLPVGTMRLRPKGSAGGQNGLKHIIE 119
Query: 121 KCGKN-YKRLRIGIG-RPPDTAHIIRHVLGNFSSPER 155
G N + RLRIGIG + VLG FS E+
Sbjct: 120 CFGSNEFARLRIGIGSQNMPKGGFSSFVLGKFSEQEK 156
>gi|228472905|ref|ZP_04057662.1| aminoacyl-tRNA hydrolase [Capnocytophaga gingivalis ATCC 33624]
gi|228275487|gb|EEK14264.1| aminoacyl-tRNA hydrolase [Capnocytophaga gingivalis ATCC 33624]
Length = 188
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 97/169 (57%), Gaps = 3/169 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF+ ++ + +++ +++ G IL+KP
Sbjct: 4 YLIVGLGNIGEEYRYTRHNIGFLAVEHLAQ-QKGVSFETVRLGDVATFSHKGRTFILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + K+P +EN LVI DDL++ FG++R+K G D GHNG K+I E+
Sbjct: 63 STFMNLSGKAIKYWLEKEKIP-IENLLVIADDLNIPFGSIRIKKKGSDGGHNGFKNIQEE 121
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
Y RLR GI I +VLG++S E L ++ I+ ++
Sbjct: 122 LQTTTYARLRFGISANYAKGTQIDYVLGHWSEDEVALLPERLEKISEAI 170
>gi|148653904|ref|YP_001280997.1| peptidyl-tRNA hydrolase [Psychrobacter sp. PRwf-1]
gi|148572988|gb|ABQ95047.1| peptidyl-tRNA hydrolase [Psychrobacter sp. PRwf-1]
Length = 207
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 99/171 (57%), Gaps = 2/171 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E RHN GF + I F+ A KKF+ G++ G L+ P
Sbjct: 19 LIVGLGNPGQQYVETRHNAGFWFVALIADQFNIELAADKKFNGLTGRGRIFGTDVRLLLP 78
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS++ + +Y + E L+ HD+LD+ G+++LKTGGG GHNGL+ I+
Sbjct: 79 MTFMNKSGQSVVPMAKYYDI-KPEELLIAHDELDIAAGSIKLKTGGGHGGHNGLRDITPH 137
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G ++ RLRIGIG P + + HVL S ++ + +D SL L+
Sbjct: 138 LGNDFHRLRIGIGHPGHKSKVSGHVLSKPSPEDQIAIEAALDAAMSSLKLM 188
>gi|162461597|ref|NP_001104963.1| chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic precursor [Zea mays]
gi|75312019|sp|Q9M5P4|CRS2_MAIZE RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 2; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 2; Flags: Precursor
gi|6752919|gb|AAF27939.1|AF225708_1 CRS2 [Zea mays]
Length = 256
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 92/156 (58%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG++Y RHN+GF +DRI + + + + G + + +++KP
Sbjct: 62 WLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKP 121
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q++MN SG+++ + +Y++P L + L+I+DD L G LRL+ GG HNGL+++ E
Sbjct: 122 QSYMNYSGEAIGPLAAYYQVP-LRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEH 180
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + RL IGIG PP +L FSS ER
Sbjct: 181 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEER 216
>gi|291456464|ref|ZP_06595854.1| aminoacyl-tRNA hydrolase [Bifidobacterium breve DSM 20213]
gi|291381741|gb|EFE89259.1| aminoacyl-tRNA hydrolase [Bifidobacterium breve DSM 20213]
Length = 199
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 95/169 (56%), Gaps = 22/169 (13%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKF--HAEI-----SEGQLDGL 54
+++AGLGNPG +Y + RHN+GFM D + W F H + S LDG
Sbjct: 6 WLIAGLGNPGKKYEDTRHNMGFMTADVLAE-----RWSVNFADHKGLAMLGKSTMNLDG- 59
Query: 55 RTI---LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG 111
RTI L KP T+MN SG ++ + +Y++ ++ +VIHDD+DL+FG +++K GG G
Sbjct: 60 RTIKFFLAKPLTYMNDSGNAVASISAYYQI-EPDHIVVIHDDMDLEFGRIKVKAGGSAGG 118
Query: 112 HNGLKSISEKCGK-NYKRLRIGIGRPPDTAH----IIRHVLGNFSSPER 155
HNG+KSI G Y R+R+G+G AH + VLG F +R
Sbjct: 119 HNGIKSIDRSLGTPKYARVRMGVGHSKRGAHAHDNTVNWVLGGFGPDQR 167
>gi|119390906|sp|Q1IHW2|PTH_ACIBL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 201
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 94/165 (56%), Gaps = 5/165 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y HN+GF+ +DRI + + A G ++G+ +L K
Sbjct: 1 MKLIVGLGNPGMQYQFTPHNLGFLAVDRIAEKYGIRVANRNCKALTGRGVIEGVDVVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MNLSG S+ E+++ ++ ++ +VI+DDLDL +G++R++ G GHNG++SI
Sbjct: 61 PETYMNLSGASVQELVSELEIDGTKDMIVIYDDLDLPYGSIRVRERGSAGGHNGVQSIIG 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
+ + R+RIGI + +VL + LP++D
Sbjct: 121 ALDTQEFLRIRIGIAPEFKLSDGASYVLSQLKKSQ----LPVVDQ 161
>gi|116510853|ref|YP_808069.1| peptidyl-tRNA hydrolase [Lactococcus lactis subsp. cremoris SK11]
gi|123126037|sp|Q033H5|PTH_LACLS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116106507|gb|ABJ71647.1| peptidyl-tRNA hydrolase [Lactococcus lactis subsp. cremoris SK11]
Length = 188
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 93/155 (60%), Gaps = 3/155 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HN+GFM +D + + + +K F + ++ ++G + L+KP
Sbjct: 4 MIVGLGNPGDKYEKTKHNMGFMALDLLANELNVDFKEEKPFMSLVASTFVNGEKLFLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y + + V+HDDLD G +RL+ G G NG+KS+
Sbjct: 64 LTFMNESGRAVAPLLKYYNIDEAD-LTVMHDDLDSPVGRVRLRQKGSSGGQNGIKSVITH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + + R++IGIGRP ++ HVL F + ++
Sbjct: 123 VGSQTFNRVKIGIGRPKHGMTVVNHVLSGFDNEDK 157
>gi|329767250|ref|ZP_08258777.1| peptidyl-tRNA hydrolase [Gemella haemolysans M341]
gi|328836917|gb|EGF86564.1| peptidyl-tRNA hydrolase [Gemella haemolysans M341]
Length = 185
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGFM +D + K KF+AE + +G++ +L+K
Sbjct: 1 MKLIVGLGNPGKQYENTRHNIGFMVLDELAKSWNVSFDKTKFNAEYAIAYHNGIKYLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + +++++ + L+I+DDLD +LK G GHNG+KSI
Sbjct: 61 PTTYMNLSGEAVGKFYDYFEIDIEDI-LIIYDDLDTKTANFKLKAKGSSGGHNGIKSIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + RL+IGI RP ++ +VLG FS E + I + +K V
Sbjct: 120 HLGTEKFNRLKIGIDRPTPPMKVVDYVLGRFSKDEMSEIEKIYSKSVNCIEDFSKMSFVD 179
Query: 180 FLN 182
+N
Sbjct: 180 LMN 182
>gi|78189056|ref|YP_379394.1| peptidyl-tRNA hydrolase [Chlorobium chlorochromatii CaD3]
gi|78171255|gb|ABB28351.1| peptidyl-tRNA hydrolase [Chlorobium chlorochromatii CaD3]
Length = 217
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 88/157 (56%), Gaps = 3/157 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGF D + + H K+K ++ +L +IK
Sbjct: 28 MKLIIGLGNPGTEYDGTRHNIGFAVADALAAHHNASFSKEKGRYLSAKIKLGSESVGIIK 87
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG +++ MNFYK+ E +VI DDL+L GT+RL+ G G NGLK I E
Sbjct: 88 PMTYMNHSGHAVVAAMNFYKVARTE-IVVICDDLNLPVGTMRLRPKGSAGGQNGLKHIIE 146
Query: 121 KCGKN-YKRLRIGIG-RPPDTAHIIRHVLGNFSSPER 155
G N + RLRIGIG + VLG FS E+
Sbjct: 147 CFGSNEFARLRIGIGSQNMPKGGFSSFVLGKFSEQEK 183
>gi|194698704|gb|ACF83436.1| unknown [Zea mays]
Length = 256
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 92/156 (58%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG++Y RHN+GF +DRI + + + + G + + +++KP
Sbjct: 62 WLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKP 121
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q++MN SG+++ + +Y++P L + L+I+DD L G LRL+ GG HNGL+++ E
Sbjct: 122 QSYMNYSGEAIGPLAAYYQVP-LRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEH 180
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + RL IGIG PP +L FSS ER
Sbjct: 181 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEER 216
>gi|309379373|emb|CBX21940.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 192
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 100/176 (56%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
+V GLGNPG EY + RHN GF +D + AWK KKF E++ L
Sbjct: 7 MVVGLGNPGKEYEQTRHNAGFWFLDEL-------AWKWKASFKEEKKFFGEVARAALPDG 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 60 DVWLLKPATFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 118
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I + G +Y RLR+GIG P D ++ +VL S+ R I D +A+SL
Sbjct: 119 LKDIQARLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRR---QIDDAVAKSL 171
>gi|296840928|ref|ZP_06863813.2| aminoacyl-tRNA hydrolase [Neisseria polysaccharea ATCC 43768]
gi|296839600|gb|EFH23538.1| aminoacyl-tRNA hydrolase [Neisseria polysaccharea ATCC 43768]
gi|325135983|gb|EGC58593.1| peptidyl-tRNA hydrolase [Neisseria meningitidis M0579]
Length = 196
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 100/176 (56%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
+V GLGNPG EY + RHN GF +D + AWK KKF E++ L
Sbjct: 11 MVVGLGNPGKEYEQTRHNAGFWFLDEL-------AWKWKASFKEEKKFFGEVARATLPDG 63
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 64 DVWLLKPTTFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 122
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I + G +Y RLR+GIG P D ++ +VL S+ R I D +A+SL
Sbjct: 123 LKDIQARLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRR---QIDDAVAKSL 175
>gi|239618099|ref|YP_002941421.1| peptidyl-tRNA hydrolase [Kosmotoga olearia TBF 19.5.1]
gi|259535202|sp|C5CFR9|PTH_KOSOT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|239506930|gb|ACR80417.1| peptidyl-tRNA hydrolase [Kosmotoga olearia TBF 19.5.1]
Length = 190
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 91/165 (55%), Gaps = 4/165 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M + GLGNPG Y RHN+GF+ +D + F +++ + + I +
Sbjct: 1 MLVFIGLGNPGPRYVLTRHNVGFLFVDELLKKFQIGSSYRAETYEAFKLKSQS--PAIAV 58
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG ++ +++ + L + +VI+DD+ + G LR++ G D GHNG+KSI
Sbjct: 59 KPLTYMNNSGIAVRDLIRDFGLSQNDRLIVIYDDVWIPLGRLRIRERGSDGGHNGVKSII 118
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G + + R+RIGIG PD ++ +VLG F+ E L ++D
Sbjct: 119 SSLGTQEFSRIRIGIGPKPDDIDMVSYVLGEFTDSELKVLWKVLD 163
>gi|254670621|emb|CBA06610.1| Peptidyl-tRNA hydrolase [Neisseria meningitidis alpha153]
gi|325142048|gb|EGC64478.1| peptidyl-tRNA hydrolase [Neisseria meningitidis 961-5945]
gi|325198013|gb|ADY93469.1| peptidyl-tRNA hydrolase [Neisseria meningitidis G2136]
Length = 192
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 100/176 (56%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
+V GLGNPG EY + RHN GF +D + AWK KKF E++ L
Sbjct: 7 MVVGLGNPGKEYEQTRHNAGFWFLDEL-------AWKWKASFKEEKKFFGEVARATLPDG 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 60 DVWLLKPTTFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 118
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I + G +Y RLR+GIG P D ++ +VL S+ R I D +A+SL
Sbjct: 119 LKDIQARLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRR---QIDDAVAKSL 171
>gi|242040937|ref|XP_002467863.1| hypothetical protein SORBIDRAFT_01g035470 [Sorghum bicolor]
gi|241921717|gb|EER94861.1| hypothetical protein SORBIDRAFT_01g035470 [Sorghum bicolor]
Length = 241
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 90/178 (50%), Gaps = 5/178 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GF ID P F A EG +DG+ ++ KP
Sbjct: 37 WLFVGLGNPGEKYQSTRHNVGFDMIDAFAQSQGIPLTTHYFKALFGEGMVDGVPVLIAKP 96
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S+ + +YKLP L LV DD+DL G LRL+ GG HNG+ ++
Sbjct: 97 QTYMNLSGESVGPLAAYYKLP-LNRVLVAFDDMDLPCGVLRLQPKGGFGRHNGILNLCNS 155
Query: 122 ---CGKNYKRLR-IGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
C + +GIGRPP VL F+ R + I L ++A R
Sbjct: 156 TLPCVDFWNFFSLVGIGRPPGQMDPKAFVLQKFNRTGRERIDSAIREGVNILKMVATR 213
>gi|225024941|ref|ZP_03714133.1| hypothetical protein EIKCOROL_01830 [Eikenella corrodens ATCC
23834]
gi|224942272|gb|EEG23481.1| hypothetical protein EIKCOROL_01830 [Eikenella corrodens ATCC
23834]
Length = 190
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 99/170 (58%), Gaps = 3/170 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF +D++ +H +KF + L+KP
Sbjct: 5 LIVGLGNPGPEYEDTRHNAGFWLLDQLAQQWHSHWQDDRKFFGHLIRSTRPSGEIRLLKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSGQS+ V +FYK+ + LVIHD+LDL+ G ++ K GGG+ GHNGLK I +
Sbjct: 65 QTYMNLSGQSVQAVASFYKI-QPQEILVIHDELDLEPGRIKFKLGGGNGGHNGLKDIQAR 123
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G ++ RLR+GIG P D ++ +VL E+ + ID +LP
Sbjct: 124 LGSPDFYRLRLGIGHPGDRNEVVNYVLKKPRREEKELIEDAIDKSIATLP 173
>gi|325280761|ref|YP_004253303.1| Peptidyl-tRNA hydrolase [Odoribacter splanchnicus DSM 20712]
gi|324312570|gb|ADY33123.1| Peptidyl-tRNA hydrolase [Odoribacter splanchnicus DSM 20712]
Length = 189
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 94/179 (52%), Gaps = 22/179 (12%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKF----HAEISEGQLDGLRTI 57
+++ GLGN G EY + RHNIGF +D F A F + + E +L G +
Sbjct: 3 YLIVGLGNIGPEYQDTRHNIGFNVLD-----AFAKASNAVFEDMRYGAVCEMKLKGRTLV 57
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KP T+MNLSG+++ M K+ L + LVI DDL L FG +RL+ G D GHNGLK+
Sbjct: 58 LLKPNTYMNLSGKAVSYWMQKEKIA-LADLLVIVDDLALPFGKMRLRAQGSDGGHNGLKN 116
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
I+ G + Y RLR GIG I +VLG + E A LP L +R
Sbjct: 117 INALLGTSAYARLRFGIGNDFLKGQQIDYVLGTWQGEE-----------AEKLPALLER 164
>gi|283458588|ref|YP_003363221.1| peptidyl-tRNA hydrolase [Rothia mucilaginosa DY-18]
gi|283134636|dbj|BAI65401.1| peptidyl-tRNA hydrolase [Rothia mucilaginosa DY-18]
Length = 195
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 107/178 (60%), Gaps = 7/178 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQL--DGLRTI 57
+++ GLGNPG EY + RHNIG M +D + + +KK + A++ EG+L G + +
Sbjct: 5 WLIVGLGNPGPEYEKTRHNIGQMVVDEL-AREVGGGFKKHGRARAQVLEGRLGIGGPKVV 63
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SG + + FY + N + + +HD+LD+ F T++LK GGG+ GHNGL+
Sbjct: 64 LAKPLTYMNTSGGPVSALAQFYDI-NPDRIIAVHDELDIPFDTIKLKIGGGEGGHNGLRD 122
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
I++ G K+Y R+R GIGRPP VL FSS E L +I N A + +L K
Sbjct: 123 ITKALGTKDYYRVRTGIGRPPGRMDTADFVLKPFSSTEAKDLPFLISNAADATMMLVK 180
>gi|270047872|pdb|1RYB|A Chain A, Crystal Structure Of The Chloroplast Group Ii Intron
Splicing Factor Crs2
Length = 205
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 92/156 (58%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG++Y RHN+GF +DRI + + + + G + + +++KP
Sbjct: 18 WLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q++MN SG+++ + +Y++P L + L+I+DD L G LRL+ GG HNGL+++ E
Sbjct: 78 QSYMNYSGEAIGPLAAYYQVP-LRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEH 136
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + RL IGIG PP +L FSS ER
Sbjct: 137 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEER 172
>gi|125622894|ref|YP_001031377.1| peptidyl-tRNA hydrolase [Lactococcus lactis subsp. cremoris MG1363]
gi|281490511|ref|YP_003352491.1| peptidyl-tRNA hydrolase [Lactococcus lactis subsp. lactis KF147]
gi|166199355|sp|A2RH85|PTH_LACLM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|124491702|emb|CAL96621.1| Pth protein [Lactococcus lactis subsp. cremoris MG1363]
gi|281374329|gb|ADA63862.1| Peptidyl-tRNA hydrolase [Lactococcus lactis subsp. lactis KF147]
gi|300069632|gb|ADJ59032.1| peptidyl-tRNA hydrolase [Lactococcus lactis subsp. cremoris NZ9000]
gi|326405610|gb|ADZ62681.1| peptidyl-tRNA hydrolase, PTH1 family [Lactococcus lactis subsp.
lactis CV56]
Length = 188
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 92/155 (59%), Gaps = 3/155 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HN+GFM +D + + +K F + ++ ++G + L+KP
Sbjct: 4 MIVGLGNPGDKYEKTKHNMGFMALDLLAKELNVDFKEEKPFMSLVASTFVNGEKLFLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ ++ +Y + + V+HDDLD G +RL+ G G NG+KS+
Sbjct: 64 LTFMNESGRAVAPLLKYYNIDEAD-LTVMHDDLDSPVGRVRLRQKGSSGGQNGIKSVITH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + + R++IGIGRP ++ HVL F + ++
Sbjct: 123 VGSQTFNRVKIGIGRPKHGMTVVNHVLSGFDNEDK 157
>gi|262384249|ref|ZP_06077384.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_1_33B]
gi|262293952|gb|EEY81885.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_1_33B]
Length = 187
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 92/166 (55%), Gaps = 12/166 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAE----ISEGQLDGLRTI 57
+++ GLGN G EY RHNIGF ++ H + F E I+ ++ I
Sbjct: 3 YLITGLGNIGSEYWGTRHNIGFRVVN-----HLVESVGGNFTEERYGAIARIRVKNCDLI 57
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
++KP TFMNLSG ++ + +P +EN L++ DDL L F TLRLK G DAGHNGLK+
Sbjct: 58 VLKPNTFMNLSGNAVRYWLQKENIP-VENLLIVVDDLALPFATLRLKPKGSDAGHNGLKN 116
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
I++ + Y RLR GIG I +VLG F PE L+P I
Sbjct: 117 IAQLLNTQEYSRLRFGIGSDFPRGGQIDYVLGKF-PPEELQLMPEI 161
>gi|241758707|ref|ZP_04756820.1| aminoacyl-tRNA hydrolase [Neisseria flavescens SK114]
gi|261380186|ref|ZP_05984759.1| aminoacyl-tRNA hydrolase [Neisseria subflava NJ9703]
gi|241320915|gb|EER57128.1| aminoacyl-tRNA hydrolase [Neisseria flavescens SK114]
gi|284797033|gb|EFC52380.1| aminoacyl-tRNA hydrolase [Neisseria subflava NJ9703]
Length = 192
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 101/176 (57%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
++ GLGNPG EY + RHN+GF +D + AWK KKF+ E++
Sbjct: 7 LIVGLGNPGQEYEQTRHNVGFWLLDEL-------AWKWKVNFKDEKKFYGEVARATTPDG 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 60 DVWLLKPMTFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 118
Query: 115 LKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I + G N+ RLR+GI P D ++ +VL S+ R I D+IA+SL
Sbjct: 119 LKDIQARLGTPNFYRLRLGIDHPGDRNLVVGYVLNKPSAEHRQ---QIDDSIAKSL 171
>gi|257457974|ref|ZP_05623133.1| peptidyl-tRNA hydrolase [Treponema vincentii ATCC 35580]
gi|257444687|gb|EEV19771.1| peptidyl-tRNA hydrolase [Treponema vincentii ATCC 35580]
Length = 205
Score = 105 bits (261), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 104/202 (51%), Gaps = 23/202 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR------IHSFHFFPAWKKKFHAEISEGQLDGLRT 56
++A LGN G EY RHN ++ DR I H F +F A ++ GQ
Sbjct: 4 LIAFLGNTGREYERTRHNAAWIAADRLNICRGISWQHKFRGLYGRFPAAVTGGQA----V 59
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+KP+T+MNLSG+S+ E F+K+P E L++HD+L+L L LK GG GHNGL+
Sbjct: 60 HALKPETYMNLSGESVGEAAQFFKIPPAE-ILIVHDELELPPAALSLKWSGGLGGHNGLR 118
Query: 117 SISEKCG-KNYKRLRIGIGRP-------PDTAHIIRHVLGNFSSPERYFL---LPIIDNI 165
S+ G ++ RLRIGIGRP D I +VL FS E L LP ++ +
Sbjct: 119 SVKAALGTADFWRLRIGIGRPGGKKSSSADHPDIAGYVLSPFSQEEFALLDTALPQLEPL 178
Query: 166 ARSLPLLAKREDVSFLNHIVSV 187
+L + ++E + L V
Sbjct: 179 FTAL-ITERKEPQTLLPAWTKV 199
>gi|300871525|ref|YP_003786398.1| peptidyl-tRNA hydrolase [Brachyspira pilosicoli 95/1000]
gi|300689226|gb|ADK31897.1| peptidyl-tRNA hydrolase [Brachyspira pilosicoli 95/1000]
Length = 194
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 96/177 (54%), Gaps = 14/177 (7%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFM 65
GLGNPG+EY +RHN+G+M +D++ KK + + + +L+KPQTFM
Sbjct: 2 GLGNPGNEYQNHRHNVGYMILDKVAKKLNVELDIKKKKTVFGKAKYGKIEYLLLKPQTFM 61
Query: 66 NLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG------------HN 113
NLSG++ L + +F K+ +++ +VI+DD+++ G +L DA HN
Sbjct: 62 NLSGEAALYMASFMKIA-VDDIIVIYDDMNIPVGEFKLVIAKNDADDNDNEEKEGPIKHN 120
Query: 114 GLKSISEKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G+KSI E N+ R+ IGIG P + I VL F+ ER + I D++ ++
Sbjct: 121 GIKSIEESLKSNNFTRVGIGIGAPAEGQEIADFVLSPFTKDERKKIKDITDDVVDAI 177
>gi|311740812|ref|ZP_07714639.1| aminoacyl-tRNA hydrolase [Corynebacterium pseudogenitalium ATCC
33035]
gi|311304332|gb|EFQ80408.1| aminoacyl-tRNA hydrolase [Corynebacterium pseudogenitalium ATCC
33035]
Length = 215
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 92/155 (59%), Gaps = 7/155 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH---FFPAWKKKFHAEISEGQLDGLRTIL 58
+++ GLGNPG +Y RHN+G+M ID + + P + +++ +G + +
Sbjct: 31 WLIVGLGNPGAKYAATRHNVGYMAIDDLLATGGDVLEPV--RGIDVQVAPLDWEGHKVLA 88
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++ TFMNLSG + + + ++ +V+HD+LDL +RLK GG + GHNGLKS+
Sbjct: 89 VRSGTFMNLSGDPVAPLAQQLGIAP-DHVIVLHDELDLPANKIRLKQGGNENGHNGLKSL 147
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSS 152
+E+ G ++Y R+RIGI RPP + I +VLG +
Sbjct: 148 TERLGTRDYLRVRIGIARPPKGSSIPDYVLGPVDT 182
>gi|229817917|ref|ZP_04448199.1| hypothetical protein BIFANG_03204 [Bifidobacterium angulatum DSM
20098]
gi|229784521|gb|EEP20635.1| hypothetical protein BIFANG_03204 [Bifidobacterium angulatum DSM
20098]
Length = 199
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 93/163 (57%), Gaps = 10/163 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG--QLDG--LRTI 57
+++AGLGNPG +Y RHN+GFM D + K A + +G LDG +
Sbjct: 6 WLIAGLGNPGSKYEGTRHNMGFMAADVLAERWSINFSDHKGLALLGKGVMSLDGRSQKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SG ++ + ++Y++ ++ +VIHDD+DLDFG +++K GG GHNG+KS
Sbjct: 66 LAKPLTYMNESGNAVASICSYYQI-EPDHVIVIHDDMDLDFGRIKVKAGGSAGGHNGIKS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDTA----HIIRHVLGNFSSPER 155
I G Y R+R+G+G A + + VLG F +R
Sbjct: 125 IDRSLGTPKYARVRMGVGHAKRGANAHDNTVNWVLGGFGPDQR 167
>gi|304387894|ref|ZP_07370068.1| aminoacyl-tRNA hydrolase [Neisseria meningitidis ATCC 13091]
gi|304338159|gb|EFM04295.1| aminoacyl-tRNA hydrolase [Neisseria meningitidis ATCC 13091]
Length = 192
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 100/176 (56%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
++ GLGNPG EY + RHN GF +D + AWK KKF E++ L
Sbjct: 7 MLVGLGNPGKEYEQTRHNAGFWFLDEL-------AWKWKASFKEEKKFFGEVARAALPDG 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 60 DVWLLKPTTFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 118
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I K G +Y RLR+GIG P D ++ +VL S+ R I D +A+SL
Sbjct: 119 LKDIQAKLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRR---QIDDAVAKSL 171
>gi|327438087|dbj|BAK14452.1| peptidyl-tRNA hydrolase [Solibacillus silvestris StLB046]
Length = 187
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y RHNIGF ID + + P + KF+ + + IL+K
Sbjct: 1 MKLIIGLGNPGKPYEHTRHNIGFDVIDELANRWNAPLNQTKFNGMYATVYRPEGKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M+++ + +E+ +VI+DDLDL+ G LRL+ G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECVRPLMDYFDI-EIEDIIVIYDDLDLETGKLRLRGKGSAGGHNGIKSLIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + + R+R+G+ RPP + +VL FS ++
Sbjct: 120 HLGTQEFNRIRVGVSRPPAGMKVADYVLAKFSKEDQ 155
>gi|325129973|gb|EGC52772.1| peptidyl-tRNA hydrolase [Neisseria meningitidis OX99.30304]
Length = 192
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 100/176 (56%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
++ GLGNPG EY + RHN GF +D + AWK KKF E++ L
Sbjct: 7 MLVGLGNPGKEYEQTRHNAGFWFLDEL-------AWKWKASFKEEKKFFGEVARATLPDG 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 60 DVWLLKPTTFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 118
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I K G +Y RLR+GIG P D ++ +VL S+ R I D +A+SL
Sbjct: 119 LKDIQAKLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRR---QIDDAVAKSL 171
>gi|170078845|ref|YP_001735483.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 7002]
gi|169886514|gb|ACB00228.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 7002]
Length = 206
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 109/190 (57%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNP +Y RHNIGF +DR+ + + +KF +E + +G + L+KP
Sbjct: 12 LIVGLGNPEPKYDHTRHNIGFEFVDRLAADWGATLQDHRKFQGVWAEVRRNGQKLGLLKP 71
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQSL V+++YK+P E+ LV++DD+DL G LRL+ G GHNG+KSI
Sbjct: 72 TTYMNRSGQSLRAVIDWYKIPP-ESVLVVYDDMDLPLGRLRLRLQGSAGGHNGIKSIISH 130
Query: 122 CG-KNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G + + RLRIGIG+ I HVLG F+ E+ L ++ +A L+ RE V
Sbjct: 131 LGTQKFPRLRIGIGKTQLKGDRPTISHVLGKFAPAEKPILNDVL-GLAEEALALSLREGV 189
Query: 179 SFLNHIVSVR 188
+ + R
Sbjct: 190 EKAMSLYNAR 199
>gi|262340830|ref|YP_003283685.1| aminoacyl-tRNA hydrolase [Blattabacterium sp. (Blattella germanica)
str. Bge]
gi|262272167|gb|ACY40075.1| aminoacyl-tRNA hydrolase [Blattabacterium sp. (Blattella germanica)
str. Bge]
Length = 188
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 90/154 (58%), Gaps = 4/154 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG+ Y + RHN+GF+ +D+I HFF KKK ISE + +KP
Sbjct: 4 FLIIGLGNPGYLYKKTRHNLGFLILDQIAKKHFFSFSKKKL-GFISEFNFEKKLLFFLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T++N SG S+ M K+ L N L+I DD+ L+FG RL+ G GHNGLKS+ ++
Sbjct: 63 STYVNHSGLSVKYWMKKEKIL-LRNILIISDDISLNFGNFRLRGKGRSGGHNGLKSVEKE 121
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + Y RLR GI + I +VL N+ + E
Sbjct: 122 IGTSHYARLRFGIKNHLE-KRIDSYVLENWKNEE 154
>gi|227528906|ref|ZP_03958955.1| aminoacyl-tRNA hydrolase [Lactobacillus vaginalis ATCC 49540]
gi|227351180|gb|EEJ41471.1| aminoacyl-tRNA hydrolase [Lactobacillus vaginalis ATCC 49540]
Length = 186
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 94/157 (59%), Gaps = 4/157 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM ++++ +H K A G ++G + +++
Sbjct: 1 MKMIVGLGNIGTRYDETRHNTGFMVVEQLARDYHLGAFTHLKQEAVAVTGMINGEKVMIV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ ++++Y + + +V++DDLD+ G +RLKT G GHNGLKSI
Sbjct: 61 KPTTFMNDSGRAVGPLVDYYDIDLDD-LVVVNDDLDMPVGKVRLKTHGASGGHNGLKSII 119
Query: 120 EKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G N + R+++GI P ++ HVLG F+ ER
Sbjct: 120 NALGTNKFNRIKVGIDHPKHGT-VVSHVLGKFTKEER 155
>gi|149280710|ref|ZP_01886820.1| peptidyl-tRNA hydrolase [Pedobacter sp. BAL39]
gi|149228534|gb|EDM33943.1| peptidyl-tRNA hydrolase [Pedobacter sp. BAL39]
Length = 200
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 89/163 (54%), Gaps = 3/163 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF D + ++ A SE G R +IKP
Sbjct: 17 YLIVGLGNIGPEYAHTRHNIGFDIADELVK-QLDGSFVNSRLAYYSEVSFKGKRLHVIKP 75
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M+ ++P +EN LVI DDL L G LRLK G AGHNGLKSI
Sbjct: 76 TTYMNLSGKAVNYWMHELRIP-IENVLVIVDDLALPLGRLRLKLQGSSAGHNGLKSIEGL 134
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
C G+ Y RLR G+ + +VL F E+ L +ID
Sbjct: 135 CGGQAYPRLRFGVSDNFPKGRQVDYVLAPFDKEEQPELPALID 177
>gi|297172153|gb|ADI23134.1| peptidyl-tRNA hydrolase [uncultured gamma proteobacterium
HF0770_09E07]
Length = 208
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 95/184 (51%), Gaps = 2/184 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG +Y +RHN G+ +D I + K + E L+ +K
Sbjct: 23 LCIVGLGNPGDKYNHSRHNAGYDYLDLICNQLSVELKKSNKIEGLLGETTYKDLKIGFVK 82
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P F+N SG++L ++ YK+ L N LVIHDD+DL+ G ++LK GGG +GH GLK I
Sbjct: 83 PNEFINNSGRTL-SLIKKYKVKELNNVLVIHDDMDLEPGEVKLKIGGGHSGHRGLKDIIN 141
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
K G ++ RLR+GIG PP V+ + E+ L SL L +E +
Sbjct: 142 KVGNDFVRLRLGIGHPPVKEETNAWVIKKPTPSEKEGLNNAFIKANESLDQLLNKEWLIA 201
Query: 181 LNHI 184
+N +
Sbjct: 202 MNDL 205
>gi|225166108|ref|ZP_03727839.1| Aminoacyl-tRNA hydrolase [Opitutaceae bacterium TAV2]
gi|224799650|gb|EEG18148.1| Aminoacyl-tRNA hydrolase [Opitutaceae bacterium TAV2]
Length = 193
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 94/163 (57%), Gaps = 7/163 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD---GLRTI 57
+ +VAGLGNPG EY RHNIG++ ++ + + +W+ + A + D G +
Sbjct: 3 ITLVAGLGNPGREYEYTRHNIGWIVVEAL-ARQLGLSWETRRSAAADVARWDPAPGQTIL 61
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SG+++ + FYK+P + ++DDL +D G +++ G GHNG+ S
Sbjct: 62 LAKPLTYMNDSGRAVQALTGFYKIPA-SAVIAVYDDLTIDLGLIKVSITGSAGGHNGVAS 120
Query: 118 ISEKCGKNYKRLRIGIG-RPPDTAHIIRHVLGNFSSPERYFLL 159
+ + G + R R+GIG + P + +VLG F +PE+Y LL
Sbjct: 121 LIQCLGGGFIRYRLGIGPKQPREIDLRDYVLGRF-TPEQYTLL 162
>gi|30249778|ref|NP_841848.1| peptidyl-tRNA hydrolase [Nitrosomonas europaea ATCC 19718]
gi|46576780|sp|Q82TQ6|PTH_NITEU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|30180815|emb|CAD85735.1| Peptidyl-tRNA hydrolase [Nitrosomonas europaea ATCC 19718]
Length = 195
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 100/174 (57%), Gaps = 3/174 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHN+GF +DR+ S + +F + L L+KP
Sbjct: 7 LVVGLGNPGEKYASTRHNVGFDWLDRLASSQRVAFTLETRFRGLCARIMLADTDIWLLKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-SE 120
QT+MN SG S+ V +YK+ E LV+HD+LDL G ++LK+GGG GHNGLKSI ++
Sbjct: 67 QTYMNASGMSVAAVCRYYKIVP-EQMLVVHDELDLQPGVIKLKSGGGTGGHNGLKSIVAD 125
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ + RLRIG+G P D ++ +VL E + ID+ + PL+A+
Sbjct: 126 LSSQVFWRLRIGVGHPGDRNQVVDYVLHPPRREEAALIDEAIDHSMQVWPLIAR 179
>gi|227499515|ref|ZP_03929622.1| aminoacyl-tRNA hydrolase [Anaerococcus tetradius ATCC 35098]
gi|227218394|gb|EEI83645.1| aminoacyl-tRNA hydrolase [Anaerococcus tetradius ATCC 35098]
Length = 195
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+ + GLGNPG +Y RHN+GF+ ID + H K KF + +G + G + +LIK
Sbjct: 1 MYYIVGLGNPGLQYENTRHNVGFLTIDYLARKHNIDVKKLKFKSLYGQGMISGHKVMLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ E+ +FYK + + +VI+DD+D+DFG++R++ G HNG+KSI
Sbjct: 61 PQTYMNSSGEAVRELKSFYKF-DTDKLIVIYDDIDIDFGSIRIRKKGSAGTHNGMKSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ N+ R+++ +G+ P + VL F+ E
Sbjct: 120 QIQDDNFPRIKLAVGKKPSYMDLANFVLSGFTEKE 154
>gi|71894626|ref|YP_278734.1| peptidyl-tRNA hydrolase [Mycoplasma synoviae 53]
gi|119390964|sp|Q4A5E8|PTH_MYCS5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71851414|gb|AAZ44023.1| peptidyl-tRNA hydrolase [Mycoplasma synoviae 53]
Length = 187
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 96/167 (57%), Gaps = 7/167 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF+ ID I K+K H ++ + I+ K
Sbjct: 1 MKLIVGLGNPGDKYKFTRHNVGFLVIDLICQKLKITLDKEKTHGSYAKFE----DFIIAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG +LE+ NF+K+ ++ LVIHD+ D + G +K GG HNG+ +
Sbjct: 57 PNTYMNLSGNFVLELANFFKIAP-DDILVIHDEKDFELGKSAIKIGGSGGSHNGVLDVIN 115
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
K +N+KRL+IGIG+ + A + +VL FS E L P+++ A
Sbjct: 116 KLNTQNFKRLKIGIGQNQEMA-LKDYVLQRFSLEEFSVLEPVLNQAA 161
>gi|319638396|ref|ZP_07993158.1| peptidyl-tRNA hydrolase [Neisseria mucosa C102]
gi|317400145|gb|EFV80804.1| peptidyl-tRNA hydrolase [Neisseria mucosa C102]
Length = 192
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 100/176 (56%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
++ GLGNPG EY + RHN+GF +D + AWK KKF+ E++
Sbjct: 7 LIVGLGNPGQEYEQTRHNVGFWLLDEL-------AWKWKVNFKDEKKFYGEVARAATPDG 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 60 DVWLLKPMTFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 118
Query: 115 LKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I + G N+ RLR+GI P D ++ +VL S+ R I D IA+SL
Sbjct: 119 LKDIQARLGTPNFYRLRLGIDHPGDRNLVVGYVLNKPSAEHRQ---QIDDAIAKSL 171
>gi|168362256|ref|ZP_02695435.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|209554113|ref|YP_002284497.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|226709071|sp|B5ZAQ7|PTH_UREU1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|171903466|gb|EDT49755.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|209541614|gb|ACI59843.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
Length = 186
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 92/162 (56%), Gaps = 3/162 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG Y + RHN GFM I+ I + KF+ ++ + +P
Sbjct: 4 YLIVGLGNPGSNYAKTRHNAGFMVINEICNKLNLFLDNSKFNGMFAKTIYNNCVVFFCQP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+ + +++ FY +P ++N +VI+DD+D G ++L+ G G NG+K+I
Sbjct: 64 TTYMNLSGEFVSKMLKFYDIP-IKNLIVIYDDVDTKLGVIKLRKKGSSGGQNGIKNIINL 122
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
+ KR+R+GIG+ P A + ++VL NF E + P I
Sbjct: 123 LKTEEIKRIRVGIGKDPH-AKLDQYVLSNFKIDELVIIKPAI 163
>gi|94971564|ref|YP_593612.1| peptidyl-tRNA hydrolase [Candidatus Koribacter versatilis Ellin345]
gi|94553614|gb|ABF43538.1| peptidyl-tRNA hydrolase [Candidatus Koribacter versatilis Ellin345]
Length = 228
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 93/163 (57%), Gaps = 5/163 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y HN+GF+ +DRI + + A G ++G+ +L KP+
Sbjct: 30 LIVGLGNPGMQYQFTPHNLGFLAVDRIAEKYGIRVANRNCKALTGRGVIEGVDVVLAKPE 89
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG S+ E+++ ++ ++ +VI+DDLDL +G++R++ G GHNG++SI
Sbjct: 90 TYMNLSGASVQELVSELEIDGTKDMIVIYDDLDLPYGSIRVRERGSAGGHNGVQSIIGAL 149
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
+ + R+RIGI + +VL + LP++D
Sbjct: 150 DTQEFLRIRIGIAPEFKLSDGASYVLSQLKKSQ----LPVVDQ 188
>gi|256824232|ref|YP_003148192.1| peptidyl-tRNA hydrolase [Kytococcus sedentarius DSM 20547]
gi|256687625|gb|ACV05427.1| peptidyl-tRNA hydrolase [Kytococcus sedentarius DSM 20547]
Length = 202
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 102/166 (61%), Gaps = 10/166 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKK-FHAEISEGQLDG---- 53
++VAGLGNPG Y NRHN+G M + + + A + + AE G L G
Sbjct: 8 WLVAGLGNPGPRYAGNRHNVGAMVVAEMAAGAGVKLSAARQARAVSAETRLGTLPGGRPG 67
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
R +L P FMNLSG + +M ++ + ++++ +V+HD+LD+DFG +RLK GGG+ GHN
Sbjct: 68 RRVVLATPLDFMNLSGGPVSGLMKYHGI-DVDHLVVLHDELDIDFGAVRLKKGGGEGGHN 126
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
GL+SI++ G K+Y R+R+GIGRPP + VL +FS ER L
Sbjct: 127 GLRSITQSLGTKDYHRIRLGIGRPPGRMDVADFVLRDFSPTERAEL 172
>gi|312880021|ref|ZP_07739821.1| peptidyl-tRNA hydrolase [Aminomonas paucivorans DSM 12260]
gi|310783312|gb|EFQ23710.1| peptidyl-tRNA hydrolase [Aminomonas paucivorans DSM 12260]
Length = 204
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 89/172 (51%), Gaps = 10/172 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG-QLDGLRTILI 59
M +V GLGNPG EY +RHN G++ +D I K +F A EG +G R +
Sbjct: 1 MKLVVGLGNPGPEYVWSRHNAGWIALDGILQRLGAGKPKLRFEASFWEGLPYEGERCSFL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG S+ E + ++ LP + LV++DD+ L FG +RL+ G G G+ SI
Sbjct: 61 KPLTYMNRSGLSVREAVRYFDLPP-SSVLVVYDDVSLPFGKIRLREQGSAGGQKGMVSIL 119
Query: 120 EKCGK-NYKRLRIGIGRPPDT-------AHIIRHVLGNFSSPERYFLLPIID 163
G RLRIGIG PP + VLG F ER P++D
Sbjct: 120 GALGTLEVPRLRIGIGEPPPQNAPEGPKRELAPWVLGTFGRRERDLWDPLLD 171
>gi|53804632|ref|YP_113533.1| peptidyl-tRNA hydrolase [Methylococcus capsulatus str. Bath]
gi|68052909|sp|Q60A14|PTH_METCA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|53758393|gb|AAU92684.1| peptidyl-tRNA hydrolase [Methylococcus capsulatus str. Bath]
Length = 187
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 92/165 (55%), Gaps = 6/165 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTI-LIK 60
++ GLGNPG Y RHN GF IDR+ + H + +FH + G ++ + L+
Sbjct: 4 LIVGLGNPGPAYDRTRHNAGFWFIDRLAAAHGCVLREESRFHGRV--GAINLTEPVHLLA 61
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ + FYK+ E+ LV+HD+LD G +R+K GG GHNGL+ I
Sbjct: 62 PLTFMNRSGLAVAAMARFYKIAP-EHILVVHDELDFGPGVVRIKRDGGHGGHNGLRDIMA 120
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
+ G + RLRIGIGRP + + +VL S +R + I+
Sbjct: 121 QLGSGGFLRLRIGIGRPAGSMAVADYVLAAPSVSDRQAISGAIEK 165
>gi|332041920|gb|EGI78264.1| peptidyl-tRNA hydrolase [Hylemonella gracilis ATCC 19624]
Length = 225
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 93/172 (54%), Gaps = 3/172 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF ID + + + ++ G L++P
Sbjct: 4 LLVGLGNPGPEYEATRHNAGFWWIDAVARELKAGLTLDRGYQGLVARTTYKGQTLWLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+S+ + F+K+ + LV HD++D+ G ++LK GGG AGHNGL+S+ +
Sbjct: 64 MTFMNESGRSVAALARFFKI-QPDEILVAHDEMDIVPGEVKLKRGGGHAGHNGLRSLHAQ 122
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G +Y RLRIG+G P + ++ VL S R + + ++LP L
Sbjct: 123 LGSDDYWRLRIGVGHPGVKSEVVSWVLKKPSLDHRAAIEDAMIRTLQALPDL 174
>gi|306823176|ref|ZP_07456552.1| aminoacyl-tRNA hydrolase [Bifidobacterium dentium ATCC 27679]
gi|309801636|ref|ZP_07695757.1| aminoacyl-tRNA hydrolase [Bifidobacterium dentium JCVIHMP022]
gi|304553808|gb|EFM41719.1| aminoacyl-tRNA hydrolase [Bifidobacterium dentium ATCC 27679]
gi|308221768|gb|EFO78059.1| aminoacyl-tRNA hydrolase [Bifidobacterium dentium JCVIHMP022]
Length = 199
Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 94/164 (57%), Gaps = 12/164 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD----GLRTI 57
+++AGLGNPG +Y RHN+GFM D + K A + +G ++ ++
Sbjct: 6 WLIAGLGNPGSKYEGTRHNMGFMTADLLAERWSVNFSDHKGLAMLGKGVMNLSGRNVKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKL-PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
L KP T+MN SG ++ + ++Y++ PN + +V+HDD+DLDFG +++K+GG GHNG+K
Sbjct: 66 LAKPLTYMNDSGNAVASISSYYQIEPN--HIVVVHDDMDLDFGRIKVKSGGSAGGHNGIK 123
Query: 117 SISEKCGK-NYKRLRIGIGRPPDTAH----IIRHVLGNFSSPER 155
SI Y R+R+G+G AH + VLG F +R
Sbjct: 124 SIDRSLDTPKYARVRMGVGHAQRGAHAHDNTVNWVLGGFGPDQR 167
>gi|116669781|ref|YP_830714.1| peptidyl-tRNA hydrolase [Arthrobacter sp. FB24]
gi|166199303|sp|A0JU94|PTH_ARTS2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116609890|gb|ABK02614.1| peptidyl-tRNA hydrolase [Arthrobacter sp. FB24]
Length = 194
Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 107/176 (60%), Gaps = 4/176 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTILI 59
+++ GLGNPG EY NRHN+G M +D + K A + EG+L G R +L
Sbjct: 5 WLIVGLGNPGTEYSNNRHNVGQMVLDELARRVGGSFKVHKARAHVLEGRLGIGGPRVVLA 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP ++MN+SG + + FY + + E+ + +HD++D+ F T++LK GGG+ GHNGL+ IS
Sbjct: 65 KPMSYMNVSGGPVSALSKFYDI-DPEHVVAVHDEIDIPFNTVKLKIGGGEGGHNGLRDIS 123
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ K+Y R+R+G+GRPP VL +F++ E+ L ++D+ A ++ + +
Sbjct: 124 KALATKDYLRVRVGVGRPPGRMDTADFVLKDFATTEKKDLPFLLDDAADAVETVVR 179
>gi|1127571|gb|AAB06184.1| peptidyl-tRNA hydrolase [Chlamydia muridarum]
Length = 194
Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 98/158 (62%), Gaps = 7/158 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
+V G+GNPG +Y RHNIGF+ +D + S F A+++ + + + + +LIK
Sbjct: 4 LVVGIGNPGRQYVWTRHNIGFLFLDMLAS-RFSGAFREAPRLFSSFMKVETSCGVIVLIK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T++NL+G+++L F+ + ++E L++ DD++ +FG++R + G GHNGLK+ ++
Sbjct: 63 PSTYVNLTGKAVLAAKRFFGV-SVEGILIVADDINREFGSIRFRQDCGAGGHNGLKNTTQ 121
Query: 121 KCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPER 155
N Y +LR+G+GRP P++ +VL NFS ER
Sbjct: 122 VLQSNHYWQLRLGVGRPSNPESEGGADYVLSNFSFNER 159
>gi|257784144|ref|YP_003179361.1| peptidyl-tRNA hydrolase [Atopobium parvulum DSM 20469]
gi|257472651|gb|ACV50770.1| peptidyl-tRNA hydrolase [Atopobium parvulum DSM 20469]
Length = 179
Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 87/152 (57%), Gaps = 7/152 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL-----DGLRT 56
++ GLGNPG +Y RHNIGF ID + + + WK + ++S + +
Sbjct: 1 MLICGLGNPGEKYAHTRHNIGFAVIDVLAARYNVHYWKNEAGCQVSTINITNASGQSQKI 60
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
IL KP FMN SG L ++ + + + LVIHD++DL+ +R +TGGG HNGL+
Sbjct: 61 ILAKPWDFMNTSGGPLCKLARAHNI-TADQILVIHDEIDLEDEHIRFRTGGGLNAHNGLR 119
Query: 117 SISEKCG-KNYKRLRIGIGRPPDTAHIIRHVL 147
SI++K G +++ RL+ GI RPP + +VL
Sbjct: 120 SIADKLGTRDFMRLQCGISRPPGRMTVANYVL 151
>gi|261367662|ref|ZP_05980545.1| aminoacyl-tRNA hydrolase [Subdoligranulum variabile DSM 15176]
gi|282570454|gb|EFB75989.1| aminoacyl-tRNA hydrolase [Subdoligranulum variabile DSM 15176]
Length = 197
Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 94/173 (54%), Gaps = 3/173 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNP +Y RHN GF +D + P K K+ Q+ + +L+KP
Sbjct: 12 WLIAGLGNPEPKYDGTRHNAGFEALDYLAEQWQCPLNKSKWQGLYGTTQVGEHKVVLLKP 71
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSGQS+ NFYK+P + +V+ DD+ G LR++ G GHNGLKSI
Sbjct: 72 LTYMNLSGQSIAPTANFYKIP-ANHIIVLCDDITQQPGHLRIRPHGSAGGHNGLKSIIAS 130
Query: 122 CG-KNYKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + + R+RIGIG P+ + + VLG +R + +I ++ LL
Sbjct: 131 LGTEEFSRIRIGIGAKPNPQYDLAVWVLGKLPPEDRKAMTDRYPDIEQACRLL 183
>gi|225621395|ref|YP_002722654.1| peptidyl-tRNA hydrolase [Brachyspira hyodysenteriae WA1]
gi|225216216|gb|ACN84950.1| peptidyl-tRNA hydrolase [Brachyspira hyodysenteriae WA1]
Length = 198
Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 14/181 (7%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y +RHN+G+M +DR+ KK +G+ + +L+K
Sbjct: 2 MKLVMGLGNPGEQYKNHRHNVGYMILDRVAKKLNVELDIKKKKTVFGKGKSGKMEYLLLK 61
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG--------- 111
PQTFMNLSG++ L + +F K+ +EN +VI+DD+D+ G R+ D
Sbjct: 62 PQTFMNLSGEAALYMASFMKI-TVENIIVIYDDMDIPIGEFRVIPSKNDDSDSESEVNDI 120
Query: 112 ---HNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
HNG+KSI + N+ ++ +GIG P+ +L F+ ER + I DN+
Sbjct: 121 EIDHNGIKSIRDSLKSYNFTKIGVGIGACPEDEEKADFLLAPFTKDERKKIRDISDNVVD 180
Query: 168 S 168
+
Sbjct: 181 A 181
>gi|225075209|ref|ZP_03718408.1| hypothetical protein NEIFLAOT_00209 [Neisseria flavescens
NRL30031/H210]
gi|224953384|gb|EEG34593.1| hypothetical protein NEIFLAOT_00209 [Neisseria flavescens
NRL30031/H210]
Length = 192
Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 100/176 (56%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
++ GLGNPG EY + RHN+GF +D + AWK KKF+ E++
Sbjct: 7 LIVGLGNPGQEYEQTRHNVGFWLLDEL-------AWKWKVNFKDEKKFYGEVARATTPDG 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 60 DVWLLKPMTFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 118
Query: 115 LKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I + G N+ RLR+GI P D ++ +VL S R I D+IA+SL
Sbjct: 119 LKDIQARLGTPNFYRLRLGIDHPGDRNLVVGYVLNKPSVEHRQ---QIDDSIAKSL 171
>gi|225452074|ref|XP_002284030.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|296087264|emb|CBI33638.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 5/157 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG++Y RHN+GF IDRI + A I G + + +L KP
Sbjct: 52 WLIVGLGNPGNKYHGTRHNVGFEMIDRISQEEGILLNTIQSKALIGIGSIGEVPILLAKP 111
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS-- 119
Q +MN SG+S+ + +Y++P L + LV++D+++L G LRL GG HNGLK++
Sbjct: 112 QAYMNFSGESVGPLAAYYQVP-LRHILVVYDEMNLPNGVLRLAPRGGHGYHNGLKNVMGH 170
Query: 120 -EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ C + + RL IGIG PP T + ++L FS ER
Sbjct: 171 LDGC-REFPRLCIGIGNPPGTMDMKAYLLQKFSFEER 206
>gi|161869739|ref|YP_001598906.1| peptidyl-tRNA hydrolase [Neisseria meningitidis 053442]
gi|189038157|sp|A9M3M7|PTH_NEIM0 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|161595292|gb|ABX72952.1| peptidyl-tRNA hydrolase [Neisseria meningitidis 053442]
Length = 192
Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 99/176 (56%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
+V GLGNPG EY + RHN GF +D + AWK KKF E++ L
Sbjct: 7 MVVGLGNPGKEYEQTRHNAGFWFLDEL-------AWKWKASFKEEKKFFGEVARAALPDG 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 60 DVWLLKPATFMNRSGQAIAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 118
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I K G +Y RLR+GI P D ++ +VL S+ R I D +A+SL
Sbjct: 119 LKDIQAKLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSTEHRR---QIDDAVAKSL 171
>gi|304311480|ref|YP_003811078.1| Peptidyl-tRNA hydrolase [gamma proteobacterium HdN1]
gi|301797213|emb|CBL45433.1| Peptidyl-tRNA hydrolase [gamma proteobacterium HdN1]
Length = 195
Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 99/177 (55%), Gaps = 4/177 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN G ++R+ S P + +F + +DG L+ P
Sbjct: 7 LIVGLGNPGQQYEHTRHNAGAWLVERLASQFRTPLKHEARFSGATARIDIDGHDVRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSGQ++ + +FY++ + +V HD+LDL G ++LKTGGG GHNGL+ I K
Sbjct: 67 STFMNLSGQAVGALASFYRIAP-DAMVVAHDELDLPPGIIKLKTGGGHGGHNGLRDIVAK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G N + RLRIGIG P + + HVL SS E+ + ID P +A E
Sbjct: 126 LGNNNGFHRLRIGIGHPGSSDRVTGHVLSKASSAEQKLIDAAIDEALAVFPSIAAGE 182
>gi|321309591|ref|YP_004191920.1| peptidyl-tRNA hydrolase [Mycoplasma haemofelis str. Langford 1]
gi|319801435|emb|CBY92081.1| peptidyl-tRNA hydrolase [Mycoplasma haemofelis str. Langford 1]
Length = 188
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 85/136 (62%), Gaps = 3/136 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG +Y HN+GF+ ID + S + + F + + D +
Sbjct: 1 MKVIVGLGNPGDKYERTHHNVGFLSIDYLVSQNLSSNVPNRSFKSLLYWLNNDSESVVFC 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI- 118
KPQTFMNLSG++L E+ +FYKL N ++LVI+DDL L+ G ++L G AGHNG+K+I
Sbjct: 61 KPQTFMNLSGEALREIKSFYKLQN-SDFLVIYDDLYLETGRIKLSLNKGPAGHNGIKNIV 119
Query: 119 SEKCGKNYKRLRIGIG 134
E G ++ +LR+GIG
Sbjct: 120 KELDGNDFLKLRVGIG 135
>gi|194364506|ref|YP_002027116.1| peptidyl-tRNA hydrolase [Stenotrophomonas maltophilia R551-3]
gi|238693442|sp|B4SKT5|PTH_STRM5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|194347310|gb|ACF50433.1| Aminoacyl-tRNA hydrolase [Stenotrophomonas maltophilia R551-3]
Length = 192
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 90/175 (51%), Gaps = 5/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ RHN GF ++ + + W K E ++ ++ G L+K
Sbjct: 6 LIVGLGNPGSEHARTRHNAGFHFVEAL-AEKAGARWNVDSKLFGETAKVEIAGQTVWLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ F+K+ E L+ HD+LDL G RLK GG G NGL+
Sbjct: 65 PATFMNLSGKSVTAAQRFWKI-EPEETLLAHDELDLAPGVARLKFDGGHGGQNGLRDTIR 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G + RLR+GIG P ++ VLG S + + ID+ LPL +
Sbjct: 124 LLGHGKFHRLRVGIGHPGHKDRVVGWVLGRPSKDDEVLISRAIDDAIDVLPLAVQ 178
>gi|170782786|ref|YP_001711120.1| peptidyl-tRNA hydrolase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157356|emb|CAQ02543.1| peptidyl-tRNA hydrolase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 195
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTILI 59
+V GLGNPG +Y RHN+G M +D + + +A+++EG+ G + IL
Sbjct: 6 LLVVGLGNPGPQYAGTRHNVGQMALDVLADRMRATFRSHRANAQVAEGRAVPGGPKLILA 65
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP +FMNLSG + +++++ L + +V HD+LD+ F +++LK GGG GHNG++ I
Sbjct: 66 KPNSFMNLSGGPVANLLSYFSLEPAQ-LVVAHDELDIPFDSMKLKQGGGHGGHNGIRDII 124
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G ++ R+RIGIGRPP VL FSS ER L ++++ A ++ ++A
Sbjct: 125 SSAGTGDFTRVRIGIGRPPGRQDAADFVLKPFSSTERQVLPNVLEDAADAVEMIAS 180
>gi|241889652|ref|ZP_04776950.1| peptidyl-tRNA hydrolase [Gemella haemolysans ATCC 10379]
gi|241863274|gb|EER67658.1| peptidyl-tRNA hydrolase [Gemella haemolysans ATCC 10379]
Length = 185
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 102/183 (55%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGFM +D + K KF++E + +G++ +LIK
Sbjct: 1 MKLIVGLGNPGKQYENTRHNIGFMVLDELAKSWNVSFDKTKFNSEYAMTYHNGIKYLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + +++++ + L+I+DDLD +LK G GHNG+KSI
Sbjct: 61 PTTYMNLSGEAVGKFYDYFEIDIEDI-LIIYDDLDTKTANFKLKAKGSSGGHNGIKSIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + RL+IGI RP ++ +VLG FS E + I + +K V
Sbjct: 120 HLGTEKFNRLKIGIDRPTPPMKVVDYVLGRFSKDEMVEIEKIYSKSINCIEDFSKMNFVD 179
Query: 180 FLN 182
+N
Sbjct: 180 LMN 182
>gi|322379485|ref|ZP_08053851.1| peptidyl-tRNA hydrolase [Helicobacter suis HS1]
gi|322380466|ref|ZP_08054665.1| peptidyl-tRNA hydrolase [Helicobacter suis HS5]
gi|321147111|gb|EFX41812.1| peptidyl-tRNA hydrolase [Helicobacter suis HS5]
gi|321148092|gb|EFX42626.1| peptidyl-tRNA hydrolase [Helicobacter suis HS1]
Length = 184
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 98/186 (52%), Gaps = 14/186 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTIL 58
++ GLGNP Y RHN+GF +D + HF K ++ + + L L
Sbjct: 1 MLLVGLGNPTPAYAHTRHNVGFDILDLLAQDLGVHFI--HKAQYCGDYARIDL----IHL 54
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSGQ+L + +K ++ L+IHDDLDL GTLR K GG GHNGLKSI
Sbjct: 55 LKPTTYMNLSGQALEAFLRHHKPRSI---LIIHDDLDLPLGTLRFKAKGGHGGHNGLKSI 111
Query: 119 SEKCGKNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
+ C + + +++IGIGR + I +VL F + E + + ++L K +
Sbjct: 112 MQHCSQPFYKMKIGIGRAHENTRDATISYVLQRFLAQEEPLKQEVFTHAKQALLFYLKTQ 171
Query: 177 DVSFLN 182
D + +
Sbjct: 172 DFTAMQ 177
>gi|167972398|ref|ZP_02554675.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|167974939|ref|ZP_02557216.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|167975180|ref|ZP_02557457.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|167989087|ref|ZP_02570758.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|195867491|ref|ZP_03079495.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|198273275|ref|ZP_03205811.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 4 str. ATCC
27816]
gi|225550448|ref|ZP_03771397.1| aminoacyl-tRNA hydrolase [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
gi|225551588|ref|ZP_03772534.1| aminoacyl-tRNA hydrolase [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|184209455|gb|EDU06498.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|188018612|gb|EDU56652.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|188997683|gb|EDU66780.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|195660092|gb|EDX53472.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|195660967|gb|EDX54220.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|198249795|gb|EDY74575.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 4 str. ATCC
27816]
gi|225379403|gb|EEH01768.1| aminoacyl-tRNA hydrolase [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|225379602|gb|EEH01964.1| aminoacyl-tRNA hydrolase [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
Length = 186
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 92/162 (56%), Gaps = 3/162 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG Y + RHN GFM ++ I + KF+ ++ + +P
Sbjct: 4 YLIVGLGNPGSNYAKTRHNAGFMVVNEICNKLNLFLDNSKFNGMFAKTIYNNCVVFFCQP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+ + +++ FY +P ++N +VI+DD+D G ++L+ G G NG+K+I
Sbjct: 64 TTYMNLSGEFVSKMLKFYDIP-IKNLIVIYDDVDTKLGVIKLRKKGSSGGQNGIKNIINL 122
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
+ KR+R+GIG+ P A + ++VL NF E + P I
Sbjct: 123 LKTEEIKRIRVGIGKDPH-AKLDQYVLSNFKIDELVIIKPAI 163
>gi|114330911|ref|YP_747133.1| peptidyl-tRNA hydrolase [Nitrosomonas eutropha C91]
gi|114307925|gb|ABI59168.1| peptidyl-tRNA hydrolase [Nitrosomonas eutropha C91]
Length = 617
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 61/164 (37%), Positives = 89/164 (54%), Gaps = 5/164 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
I+ GLGNPG EY HNIG+ +D + H W++ +I QL+ L K
Sbjct: 442 IIVGLGNPGAEYKNTPHNIGYFVLDSLAENHG-AIWQETDEGQICSIQLESKPVSLFKAT 500
Query: 63 TFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+MN +G L + LP E +++HDD D++FG + +K+ GGDAGH G++S
Sbjct: 501 AYMNETGPKLQRYLAKTGCLP--EQCIIVHDDTDIEFGKIYIKSDGGDAGHWGVRSCLVA 558
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G + KRLR+G+G P T R VL NFS E+ L I+++
Sbjct: 559 LGTDQVKRLRLGVGVPGKTGSAKRRVLTNFSQEEQQRLQQIVED 602
>gi|225873664|ref|YP_002755123.1| aminoacyl-tRNA hydrolase [Acidobacterium capsulatum ATCC 51196]
gi|254783844|sp|C1F905|PTH_ACIC5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|225793129|gb|ACO33219.1| aminoacyl-tRNA hydrolase [Acidobacterium capsulatum ATCC 51196]
Length = 198
Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF+V GLGNPG EY HN GF+ +D I + H ++ A + QL G IL K
Sbjct: 1 MFLVVGLGNPGIEYQFTPHNAGFLAVDAIAAEHNAVVSNRRCQALTGKIQLGGREVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MNLSG ++ ++ + + LV++D+LDL G++R++ G A HNG +SI
Sbjct: 61 PETYMNLSGVAVSALVRELNADPVRDLLVLYDELDLPIGSIRVRERGSPASHNGARSICS 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN----IARSLPLLAKR 175
G ++ R+RIG+G P + R +P R L +D AR++ + R
Sbjct: 121 ALGTADWPRVRIGVG-PSGEDDLFRKGKNYLLTPMRKADLATLDGALERTARAVETVVTR 179
>gi|78187065|ref|YP_375108.1| peptidyl-tRNA hydrolase [Chlorobium luteolum DSM 273]
gi|119390974|sp|Q3B3L6|PTH_PELLD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78166967|gb|ABB24065.1| peptidyl-tRNA hydrolase [Chlorobium luteolum DSM 273]
Length = 190
Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 103/189 (54%), Gaps = 11/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSF--HFFPAWKKKFHAEISEGQLDGLRTIL 58
M ++ GLGNP Y RHNIGF +D + + F + K K+ A + + L +L
Sbjct: 1 MKLIIGLGNPESRYNNTRHNIGFDLVDSLAAAFGSSFSSGKGKYLAAKITHRQETL--ML 58
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
IKP T+MNLSG +++ MNF+K+ + LV+ DDL+L GT+RL+ G G NGLK I
Sbjct: 59 IKPTTYMNLSGHAVVAAMNFHKVQK-NDILVVCDDLNLPSGTMRLRAKGSAGGQNGLKHI 117
Query: 119 SEKCGKN-YKRLRIGI---GRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
E G + + RLRIGI PP + VLG FS+ ER + +++ ++ AK
Sbjct: 118 IESLGSDEFARLRIGIRLGEMPPGS--FSSFVLGKFSAEERVVMDRTLESCREAVLDFAK 175
Query: 175 REDVSFLNH 183
+NH
Sbjct: 176 NGIEHAMNH 184
>gi|56460039|ref|YP_155320.1| peptidyl-tRNA hydrolase [Idiomarina loihiensis L2TR]
gi|68052890|sp|Q5QV03|PTH_IDILO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56179049|gb|AAV81771.1| Peptidyl-tRNA hydrolase [Idiomarina loihiensis L2TR]
Length = 198
Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 101/190 (53%), Gaps = 7/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY RHN GF +D R H+ P K K A I Q ++
Sbjct: 7 LLVGLGNPGPEYERTRHNAGFWLVDDFCRRHAITLSPDTKSK--ALIGRWQQGAHDLRIV 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
PQ FMN SG S+ + NFYK+P E LV +D+LDL G + K GGG GHNG+K I
Sbjct: 65 LPQNFMNRSGFSVAALANFYKIPANE-ILVAYDELDLPPGVAKFKKGGGAGGHNGIKDII 123
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G +++ RLRIGIG P D + VLG S+ E+ + ID +RS+ L
Sbjct: 124 AQTGSQDFMRLRIGIGHPGDKTKVTGFVLGKASANEQRLIDDCIDEASRSIDTLMAEGWG 183
Query: 179 SFLNHIVSVR 188
+ L + S R
Sbjct: 184 TALQRLHSYR 193
>gi|115434354|ref|NP_001041935.1| Os01g0132800 [Oryza sativa Japonica Group]
gi|75288538|sp|Q5ZCL8|CRS2_ORYSJ RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic; AltName: Full=CRS2-like protein;
AltName: Full=Chloroplastic RNA splicing factor 2;
Flags: Precursor
gi|53792159|dbj|BAD52792.1| putative peptidyl-tRNA hydrolase [Oryza sativa Japonica Group]
gi|113531466|dbj|BAF03849.1| Os01g0132800 [Oryza sativa Japonica Group]
gi|215687059|dbj|BAG90905.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617682|gb|EEE53814.1| hypothetical protein OsJ_00257 [Oryza sativa Japonica Group]
Length = 259
Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 90/156 (57%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG +Y RHN+GF +DRI + + + G + + +L+KP
Sbjct: 65 WLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKP 124
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
Q+++N SG+++ + +Y++P L + LV++D++ L G LRL+ GG HNGL+++ E
Sbjct: 125 QSYINYSGEAIGPLAAYYQVP-LRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVMEC 183
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ RL IGIG PP +L FSS ER
Sbjct: 184 LDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEER 219
>gi|15827040|ref|NP_301303.1| peptidyl-tRNA hydrolase [Mycobacterium leprae TN]
gi|221229518|ref|YP_002502934.1| peptidyl-tRNA hydrolase [Mycobacterium leprae Br4923]
gi|14195075|sp|Q9CD49|PTH_MYCLE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783881|sp|B8ZU62|PTH_MYCLB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|13092587|emb|CAC29752.1| putative peptidyl-tRNA hydrolase [Mycobacterium leprae]
gi|219932625|emb|CAR70337.1| putative peptidyl-tRNA hydrolase [Mycobacterium leprae Br4923]
Length = 199
Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 103/173 (59%), Gaps = 5/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILIK 60
+V GLGNPG Y RHN+GFM + + + ++ K+ A++ G+L G ++ K
Sbjct: 14 LVVGLGNPGKNYGRTRHNVGFM-VANLLAVRLGSKFEVHKRSGADVVNGRLAGCSMLVAK 72
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ +MN SGQ + + Y + + +++HDDLDLDFG +RLK GGG+ GHNGL+S++
Sbjct: 73 PRNYMNESGQQVGLLAKLYSV-TPADIIIVHDDLDLDFGRIRLKLGGGEGGHNGLRSVAA 131
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K+++R+RIGIGRP VL NF++ ER + I A + LL
Sbjct: 132 ALGTKDFQRVRIGIGRPTGRKDPASFVLENFTTAERMQVPTICKRAADATELL 184
>gi|309808561|ref|ZP_07702457.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LactinV 01V1-a]
gi|308168189|gb|EFO70311.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LactinV 01V1-a]
Length = 150
Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 91/153 (59%), Gaps = 5/153 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM ID + K+KF + ++ G IL++
Sbjct: 1 MKLIVGLGNPGLKYQKTKHNTGFMAIDYYLKKNGLSFNKEKFEGFWIKTKIKGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++++F+K+ + + LVIHDD+D+ +RL+ G GHNG+KSI
Sbjct: 61 PQTYMNDSGKSVTQLVDFFKI-DAHDILVIHDDMDMPVAKIRLRKSGKSGGHNGIKSIIN 119
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFS 151
C + RL+IGI P ++ VL FS
Sbjct: 120 -CLNDSEFNRLKIGIDHPTKET-VVSWVLTPFS 150
>gi|300743864|ref|ZP_07072884.1| aminoacyl-tRNA hydrolase [Rothia dentocariosa M567]
gi|300380225|gb|EFJ76788.1| aminoacyl-tRNA hydrolase [Rothia dentocariosa M567]
Length = 194
Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 110/176 (62%), Gaps = 7/176 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQL--DGLRTI 57
+++ GLGNPG +Y + RHNIG M +D+I + +KK K A + EG+L G + +
Sbjct: 5 WLIVGLGNPGPQYAKTRHNIGQMVLDKI-AHEMGSTFKKHSKASAVVVEGRLGIGGPKVV 63
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+K +MN SG + V FY + + ++ +V+HD+LD+ F T++LK GGG+ GHNGL+
Sbjct: 64 LMKSLGYMNTSGGPVSAVAKFYGI-DPDHIIVVHDELDIPFDTIKLKIGGGEGGHNGLRD 122
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I++ G K+Y R+R GIGRPP + +VL F++ E L +IDN ++ +L
Sbjct: 123 ITKALGTKDYYRVRTGIGRPPGRMNTADYVLKPFTAAEAKDLPFLIDNSVDAVAML 178
>gi|221135306|ref|ZP_03561609.1| peptidyl-tRNA hydrolase [Glaciecola sp. HTCC2999]
Length = 194
Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 95/180 (52%), Gaps = 5/180 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G M + + +F + KF + G L+ P
Sbjct: 6 LIVGLGNPGPEYQNTRHNAGEMFVSSLARTFSCTLKPESKFFGLTGRTNIAGRDVRLLYP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + FYK+ + N LV +D+LDL G + K GG + NG++ I +
Sbjct: 66 TTYMNKSGQSVAAIAQFYKI-EVANILVAYDELDLPPGIAKFKVGGSSS-QNGIRDIVSR 123
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLRIGIG P + + +VLG + E+ + ID RS +L K + V+
Sbjct: 124 MGNQKDFLRLRIGIGHPGHKSRVTGYVLGKAPATEQAQIDAAIDESIRSTEILIKEDLVA 183
>gi|34540028|ref|NP_904507.1| peptidyl-tRNA hydrolase [Porphyromonas gingivalis W83]
gi|46576708|sp|Q7MXK9|PTH_PORGI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|34396339|gb|AAQ65406.1| peptidyl-tRNA hydrolase [Porphyromonas gingivalis W83]
Length = 185
Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHN+GF ++ + + ++ A I+ ++ IL+KP
Sbjct: 3 YLIVGLGNIGGEYNGTRHNVGFRMVNALAEDGGVQFVEARYGA-IARMRVKNAELILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M +P E LV+ DDL L FGTLRLK G DAGHNGLK+I+E
Sbjct: 62 NTYMNLSGNAVRYWMQQENIPR-EQVLVLVDDLALPFGTLRLKPKGSDAGHNGLKNIAEV 120
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNF 150
G +Y RLR G+G + VLG F
Sbjct: 121 MGSIDYARLRFGLGDEFSKGRQVDFVLGRF 150
>gi|325000633|ref|ZP_08121745.1| peptidyl-tRNA hydrolase [Pseudonocardia sp. P1]
Length = 197
Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 96/155 (61%), Gaps = 4/155 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILIK 60
+V GLGNPG EY RHN+G + + + K+ +A++++G+L G +
Sbjct: 9 LVVGLGNPGPEYEGTRHNVGTRVAALLAARAGAGRFSVHKRSNADVAQGRLAGRPVTVAV 68
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MNLSG + ++ ++ +P E +VIHD+LDLDFG +RLK GGG+ GHNGL+SIS
Sbjct: 69 PRTYMNLSGGPVTGLVKYFSVPPTE-VIVIHDELDLDFGVVRLKRGGGEGGHNGLRSISR 127
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G K+Y R+R GIGRPP +VL FS E
Sbjct: 128 SLGTKDYLRVRFGIGRPPGRQDPADYVLKRFSGAE 162
>gi|148273453|ref|YP_001223014.1| peptidyl-tRNA hydrolase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831383|emb|CAN02341.1| putative peptidyl-tRNA hydrolase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 195
Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 103/176 (58%), Gaps = 4/176 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTILI 59
+V GLGNPG +Y RHN+G M +D + + +A+++EG+ G + IL
Sbjct: 6 LLVVGLGNPGPQYAGTRHNVGQMALDVLADRMRATFRSHRSNAQVAEGRAVPGGPKLILA 65
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP +FMNLSG + ++ ++ L + +V HD+LD+ F +++LK GGG GHNG++ I
Sbjct: 66 KPSSFMNLSGGPVANLLKYFSLEPAQ-LVVAHDELDIPFDSMKLKQGGGHGGHNGIRDII 124
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G ++ R+RIGIGRPP VL FSS ER L ++++ A ++ ++A
Sbjct: 125 SSAGTGDFTRVRIGIGRPPGRQDAADFVLKPFSSTERQVLPNVLEDAADAIEMIAS 180
>gi|72383452|ref|YP_292807.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. NATL2A]
gi|119390978|sp|Q46HC4|PTH_PROMT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|72003302|gb|AAZ59104.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. NATL2A]
Length = 202
Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH--FFPAWKKKFHAEISEGQLDGL-RTILI 59
++ GLGNPG EY + RHN+GFM ++ I + F KK F G G+ +T L+
Sbjct: 8 LLVGLGNPGTEYEKTRHNVGFMVLEEIARKNNCSFRESKKLFGRTCEYGS--GIEKTRLL 65
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SG+S+ +++ N +V+ DD+DL G +R+++ G GHNGLKSI
Sbjct: 66 MPNTYMNESGKSVRSAKDWFDFQN-NQLIVLVDDMDLPLGKIRVRSKGSSGGHNGLKSII 124
Query: 120 EKCGK-NYKRLRIGIGRPPD-----TAHIIRHVLGNFSSPERYFLLPIIDNI 165
G +KRL+IGIG P + + + HVLG FS E L II I
Sbjct: 125 NHLGTAEFKRLKIGIGAPSNDQQERKSKTVSHVLGRFSKEEFIILNFIIQEI 176
>gi|329948077|ref|ZP_08294978.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328523216|gb|EGF50317.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 200
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 102/178 (57%), Gaps = 11/178 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI--HSFHFFPAWKKKFHAEISEGQL-------D 52
++V GLGNPG Y NRHN+G M +D + + F + KK A ++EG+L
Sbjct: 5 WLVVGLGNPGTRYARNRHNVGHMVLDVLAERTGSRF-SNHKKARARVAEGRLGMMPGGAP 63
Query: 53 GLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGH 112
G R IL +P MNLSG + ++++Y + LVIHD+LDL LRLK GGG+ GH
Sbjct: 64 GPRVILAEPSVLMNLSGGPVSGLVSYYGIDPTSRLLVIHDELDLPAHELRLKRGGGEGGH 123
Query: 113 NGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
NGL+SIS+ K+Y RLR+GIGRPP VL +F ER L ++ A ++
Sbjct: 124 NGLRSISKSVSTKDYARLRVGIGRPPGRQDPSDFVLSDFPGRERADLGVTLEQAADAV 181
>gi|104773516|ref|YP_618496.1| peptidyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513511|ref|YP_812417.1| peptidyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|300812111|ref|ZP_07092559.1| aminoacyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|119390952|sp|Q1GBP4|PTH_LACDA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|122275719|sp|Q04C43|PTH_LACDB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|103422597|emb|CAI97200.1| Peptidyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116092826|gb|ABJ57979.1| peptidyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|300496950|gb|EFK32024.1| aminoacyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|325125147|gb|ADY84477.1| Peptidyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 185
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 91/156 (58%), Gaps = 3/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ LGNPG +Y + +HN GFM +D + KF A ++ ++ G I ++
Sbjct: 1 MKLIVALGNPGLKYEKTKHNTGFMALDHYLDEKGLRLDRDKFTALYAKEKVAGEDVIFME 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ F+K+ + + LVIHDD+D+ LR++ GG GHNG+KSI
Sbjct: 61 PQTYMNESGRAVGAAAKFFKI-DPSDILVIHDDMDMPIAKLRIRAGGKSGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + + RL+IGI R PD ++ VL F+ ++
Sbjct: 120 CLGTEKFNRLKIGI-RHPDKQSVVSWVLTPFNPDQQ 154
>gi|320109098|ref|YP_004184688.1| peptidyl-tRNA hydrolase [Terriglobus saanensis SP1PR4]
gi|319927619|gb|ADV84694.1| peptidyl-tRNA hydrolase [Terriglobus saanensis SP1PR4]
Length = 201
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY HN GF+ IDRI ++ A + L G +L K
Sbjct: 1 MKLIVGLGNPGPEYVFTPHNAGFLAIDRIAEDRNAVVSNRRGRALTGKAILAGHECLLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MN SG S+ ++ +L ++ +V++D+L G LRLK G GHNG+KSIS
Sbjct: 61 PETYMNSSGASVAALVQELELDPQKDLIVLYDELAFPLGELRLKQNGSANGHNGVKSISS 120
Query: 121 KCG-KNYKRLRIGIGRP--PDTAHI 142
G + + R+RIG+GRP PD +
Sbjct: 121 SLGTEEWMRVRIGVGRPNAPDGREV 145
>gi|88801938|ref|ZP_01117466.1| peptidyl-tRNA hydrolase [Polaribacter irgensii 23-P]
gi|88782596|gb|EAR13773.1| peptidyl-tRNA hydrolase [Polaribacter irgensii 23-P]
Length = 195
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 89/172 (51%), Gaps = 6/172 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G Y RHNIGF +D + + H +K +I+ G L+KP
Sbjct: 11 FLIVGLGNIGDAYKNTRHNIGFKILDAVAAAHAVTFETEKL-GDIASFGFKGKSFTLLKP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M+ + +EN L++ DD+ +DFGT+R+K G GHNGL+ I EK
Sbjct: 70 STYMNLSGKAVKYWMDKENIA-IENILIVTDDVHIDFGTIRIKAKGTAGGHNGLRDIQEK 128
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL---LPIIDNIARSL 169
+ Y R R G+G + VLG + E L LP N S
Sbjct: 129 LNTQEYSRFRFGVGANFARGRQVDFVLGEWDKEETSQLIERLPTSSNAITSF 180
>gi|313123079|ref|YP_004033338.1| peptidyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312279642|gb|ADQ60361.1| Peptidyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 185
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 91/156 (58%), Gaps = 3/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ LGNPG +Y + +HN GFM +D + KF A ++ ++ G I ++
Sbjct: 1 MKLIVALGNPGLKYEKTKHNTGFMALDHYLDEKGLRLDRDKFTALYAKEKVAGEDVIFME 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ F+K+ + + LVIHDD+D+ LR++ GG GHNG+KSI
Sbjct: 61 PQTYMNESGRAVGAAAKFFKI-DPSDILVIHDDMDMPIAKLRIRAGGKSGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + + RL+IGI R PD ++ VL F+ ++
Sbjct: 120 CLGTEKFNRLKIGI-RHPDKQSVVSWVLTPFNPDQQ 154
>gi|261392838|emb|CAX50419.1| peptidyl-tRNA hydrolase (PTH) [Neisseria meningitidis 8013]
gi|325127928|gb|EGC50831.1| peptidyl-tRNA hydrolase [Neisseria meningitidis N1568]
gi|325144168|gb|EGC66475.1| peptidyl-tRNA hydrolase [Neisseria meningitidis M01-240013]
Length = 192
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 99/176 (56%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
+V GLGNPG EY + RHN GF +D + AWK KKF E++ L
Sbjct: 7 MVVGLGNPGKEYEQTRHNAGFWFLDEL-------AWKWKASFKEEKKFFGEVARATLPDG 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 60 DVWLLKPTTFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 118
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I + G +Y RLR+GI P D ++ +VL S+ R I D IA+SL
Sbjct: 119 LKDIQARLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSAEHRQ---QIDDAIAKSL 171
>gi|190572920|ref|YP_001970765.1| peptidyl-tRNA hydrolase [Stenotrophomonas maltophilia K279a]
gi|229485512|sp|B2FQ21|PTH_STRMK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|190010842|emb|CAQ44451.1| putative peptidyl-tRNA hydrolase [Stenotrophomonas maltophilia
K279a]
Length = 192
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 90/175 (51%), Gaps = 5/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ RHN GF ++ + + W K E ++ ++ G L+K
Sbjct: 6 LIVGLGNPGSEHARTRHNAGFHFVEAL-AEKAGARWNVDSKLFGETAKVEIAGQTVWLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ F+K+ E L+ HD+LDL G RLK GG G NGL+
Sbjct: 65 PATFMNLSGKSVTAAQRFWKI-EPEETLLAHDELDLAPGVARLKFDGGHGGQNGLRDTIR 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G + RLR+GIG P ++ VLG S + + ID+ +PL +
Sbjct: 124 LLGHGKFHRLRVGIGHPGHKDRVVGWVLGRPSKEDDVLIARAIDDAIDVMPLAVQ 178
>gi|325921464|ref|ZP_08183319.1| peptidyl-tRNA hydrolase [Xanthomonas gardneri ATCC 19865]
gi|325548011|gb|EGD19010.1| peptidyl-tRNA hydrolase [Xanthomonas gardneri ATCC 19865]
Length = 192
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW--KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ + RHN GF +D + H W K E ++ ++ G L+K
Sbjct: 6 LIVGLGNPGPEHAQTRHNAGFRFVDALVERHG-ARWGLDAKLFGETAKVEIAGHPVWLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + F+K+ E LV HD+LDL GT RLK GG G NGL+
Sbjct: 65 PATFMNLSGKSITAALRFWKI-EPEQLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIR 123
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLG 148
G + RLR+GIG P ++ VLG
Sbjct: 124 LLGHGKFHRLRVGIGHPGHKDRVVPWVLG 152
>gi|225012235|ref|ZP_03702672.1| Aminoacyl-tRNA hydrolase [Flavobacteria bacterium MS024-2A]
gi|225003790|gb|EEG41763.1| Aminoacyl-tRNA hydrolase [Flavobacteria bacterium MS024-2A]
Length = 204
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 90/158 (56%), Gaps = 3/158 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G EY RHN+GF +D+I + W+ K A+ + + G + ILIKP
Sbjct: 20 FLIVGLGNIGEEYENTRHNVGFSILDQIAEKNE-CLWETKKLADYTLLKKKGRQFILIKP 78
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ +P LEN L++ D++ L FGT+R+K G AGHNGLK I +
Sbjct: 79 NTFMNRSGKAVRYWALQENIP-LENILILTDEIHLPFGTIRIKGKGSPAGHNGLKDIENQ 137
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
NY RLR GIG+ ++ VL + E+ L
Sbjct: 138 LNTPNYARLRFGIGQEQKAFDQVKFVLDPWEVSEQKVL 175
>gi|323142934|ref|ZP_08077644.1| aminoacyl-tRNA hydrolase [Succinatimonas hippei YIT 12066]
gi|322417287|gb|EFY07911.1| aminoacyl-tRNA hydrolase [Succinatimonas hippei YIT 12066]
Length = 197
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 94/159 (59%), Gaps = 11/159 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIG----FMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTIL 58
++ GLGN G +Y RHN+G F D+ + + P + KF + G ++G L
Sbjct: 9 LIVGLGNIGPKYEHTRHNMGCDLLFNIADK-YRINLNP--ESKFSGLVGRGSIEGKEVRL 65
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+ P TFMN SG+S+ + NF+++ E LV+HDDLDL GT+R K GGG AGHNGLKSI
Sbjct: 66 VFPTTFMNESGRSVGALCNFFRIAP-EEILVLHDDLDLPPGTIRFKFGGGLAGHNGLKSI 124
Query: 119 SE--KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ +NY RLRIGIG P+ + +I VL + +R
Sbjct: 125 TACLSGAQNYYRLRIGIGH-PERSDVINWVLNRPAPQDR 162
>gi|91217231|ref|ZP_01254192.1| peptidyl-tRNA hydrolase [Psychroflexus torquis ATCC 700755]
gi|91184574|gb|EAS70956.1| peptidyl-tRNA hydrolase [Psychroflexus torquis ATCC 700755]
Length = 207
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTIL 58
F++ GLGNPG +Y RHNIGF +D + F P + + +E G + IL
Sbjct: 23 FLIVGLGNPGPKYENTRHNIGFKILDTLAEKKEVSFEPDR----YGDKAEVSFKGRKFIL 78
Query: 59 IKPQTFMNLSGQSL---LEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
IKP TFMNLSG+++ LE N ++N +VI DDL+L+FG RLK G D GHNGL
Sbjct: 79 IKPSTFMNLSGKAVRYWLEKENIA----IDNLIVITDDLNLNFGIFRLKAKGSDGGHNGL 134
Query: 116 KSISEKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
K I Y R R GI I +VL N+ E+ L +D A
Sbjct: 135 KHIQSILQTTQYPRFRFGISDEFSKGKQIDYVLSNWDEEEKTQLKERLDASA 186
>gi|254524732|ref|ZP_05136787.1| peptidyl-tRNA hydrolase [Stenotrophomonas sp. SKA14]
gi|219722323|gb|EED40848.1| peptidyl-tRNA hydrolase [Stenotrophomonas sp. SKA14]
Length = 192
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 90/175 (51%), Gaps = 5/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ RHN GF ++ + + W K E ++ ++ G L+K
Sbjct: 6 LIVGLGNPGSEHARTRHNAGFHFVEAL-AEKAGARWNVDSKLFGETAKVEIAGQTVWLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ F+K+ E L+ HD+LDL G RLK GG G NGL+
Sbjct: 65 PATFMNLSGKSVTAAQRFWKI-EPEETLLAHDELDLAPGVARLKFDGGHGGQNGLRDTIR 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G + RLR+GIG P ++ VLG S + + ID+ +PL +
Sbjct: 124 LLGHGKFHRLRVGIGHPGHKDRVVGWVLGRPSKDDDVLIARAIDDAIDVMPLAVQ 178
>gi|328469741|gb|EGF40663.1| peptidyl-tRNA hydrolase [Listeria monocytogenes 220]
Length = 163
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 93/160 (58%), Gaps = 3/160 (1%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
M +D + H P K KF+ SE + G + IL+KP TFMN SG+ + +M++Y +P
Sbjct: 1 MVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVKPLTFMNASGECIRPLMDYYNIP- 59
Query: 84 LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC-GKNYKRLRIGIGRPPDTAHI 142
+E+ ++++DDLDL G +RL+ G GHNG+KSI + + + R+R+G+ RP +
Sbjct: 60 IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQHVKTQEFNRIRVGVSRPL-KGEV 118
Query: 143 IRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
I +VLG+F E+ ++ I A ++ A+ + +N
Sbjct: 119 IHYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIEVMN 158
>gi|300932600|ref|ZP_07147856.1| Peptidyl-tRNA hydrolase [Corynebacterium resistens DSM 45100]
Length = 220
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 15/164 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF---------HFFPAWKKKF-HAEISEGQL 51
+I+ GLGNP +Y RHN+G++ D++ + P + F A + L
Sbjct: 29 WIIIGLGNPSAKYATTRHNVGYIASDQLFEDLNTDATPLDYLRPVPGQNFCEARV---HL 85
Query: 52 DGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG 111
+ +I+ TFMN SG+++ +Y +P E +V+HD+LD+ G +R+K GG + G
Sbjct: 86 GAHQLAIIRSHTFMNESGEAIKAASEYYGVPP-ERIIVLHDELDIPHGRVRVKLGGNENG 144
Query: 112 HNGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
HNGLKS + + G ++Y R+R+GIGRPP +I HVL E
Sbjct: 145 HNGLKSTTAELGTRDYMRVRMGIGRPPQGQTVIDHVLSPIEQGE 188
>gi|15618859|ref|NP_225145.1| peptidyl-tRNA hydrolase [Chlamydophila pneumoniae CWL029]
gi|15836483|ref|NP_301007.1| peptidyl-tRNA hydrolase [Chlamydophila pneumoniae J138]
gi|16752080|ref|NP_445446.1| peptidyl-tRNA hydrolase [Chlamydophila pneumoniae AR39]
gi|33242318|ref|NP_877259.1| peptidyl-tRNA hydrolase [Chlamydophila pneumoniae TW-183]
gi|6647699|sp|Q9Z6V6|PTH_CHLPN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|4377275|gb|AAD19088.1| Peptidyl tRNA Hydrolase [Chlamydophila pneumoniae CWL029]
gi|7189822|gb|AAF38694.1| peptidyl-tRNA hydrolase [Chlamydophila pneumoniae AR39]
gi|8979324|dbj|BAA99158.1| peptidyl tRNA hydrolase [Chlamydophila pneumoniae J138]
gi|33236829|gb|AAP98916.1| peptidyl tRNA hydrolase [Chlamydophila pneumoniae TW-183]
Length = 180
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 88/156 (56%), Gaps = 5/156 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILIK 60
++ +GNP H Y RHN GF+ DR+ P +K K HA ++ + + IK
Sbjct: 4 LIVAIGNPRHGYANTRHNAGFLLADRLVEELQGPPFKPLSKCHALMTLVESSSGPLVFIK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TF+NLSG++++ ++ + L + LV+ DD++ FG LRL GG GHNGLKSI+
Sbjct: 64 PTTFVNLSGKAVVLAKKYFNVA-LSHILVLADDVNRSFGKLRLCFNGGSGGHNGLKSITA 122
Query: 121 KCGKN-YKRLRIGIGRP-PDTAHIIRHVLGNFSSPE 154
G N Y +LR G+GRP + + VLG FS E
Sbjct: 123 SLGSNEYWQLRFGVGRPLEEGVELSNFVLGKFSEEE 158
>gi|255325413|ref|ZP_05366517.1| aminoacyl-tRNA hydrolase [Corynebacterium tuberculostearicum SK141]
gi|255297499|gb|EET76812.1| aminoacyl-tRNA hydrolase [Corynebacterium tuberculostearicum SK141]
Length = 215
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH---FFPAWKKKFHAEISEGQLDGLRTIL 58
+++ GLGNPG +Y RHN+G+M +D + + P + +++ G + +
Sbjct: 31 WLIVGLGNPGAKYAATRHNVGYMAVDDLLAAGGDVLEPV--RGMDVQVAPLSWAGQKVLA 88
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++ TFMNLSG + + + ++ +V+HD+LDL +R+K GG + GHNGLKS+
Sbjct: 89 VRSGTFMNLSGDPVAPLAQELGIAP-DHVIVLHDELDLPANKIRIKQGGNENGHNGLKSL 147
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLG 148
+E+ G ++Y R+RIGI RPP + I +VLG
Sbjct: 148 TERLGARDYLRVRIGIARPPKGSSIPDYVLG 178
>gi|78046538|ref|YP_362713.1| peptidyl-tRNA hydrolase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|119391036|sp|Q3BX00|PTH_XANC5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78034968|emb|CAJ22613.1| peptidyl tRNA hydrolase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 193
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D I A K E ++ ++ G L+KP
Sbjct: 6 LIVGLGNPGPEHAQTRHNAGFRFVDALIERSGARWALDSKLFGETAKVEVAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E+ LV HD+LDL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSITAALRFWKI-EPEHLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLG 148
G + RLR+GIG P ++ VLG
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVPWVLG 152
>gi|297572062|ref|YP_003697836.1| peptidyl-tRNA hydrolase [Arcanobacterium haemolyticum DSM 20595]
gi|296932409|gb|ADH93217.1| peptidyl-tRNA hydrolase [Arcanobacterium haemolyticum DSM 20595]
Length = 195
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 101/178 (56%), Gaps = 11/178 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIH-------SFHFFPAWKK-KFHAEISEGQLD 52
M+ V GLGNPG Y RHNIG M ID + S H + ++ GQ
Sbjct: 1 MYTVVGLGNPGPTYAATRHNIGQMVIDTLARKLGISLSMHKQSQTRSGSTRVGVAPGQ-P 59
Query: 53 GLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGH 112
G + +L +MN SG +M++Y ++E+ +VIHD+LDL FGTLRLK GGG+ GH
Sbjct: 60 GEQVVLGISTGYMNTSGGPTKALMSYYH-GDVEHLIVIHDELDLPFGTLRLKRGGGEGGH 118
Query: 113 NGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
NGLKSIS+ G KNY RLR GIGRPP VL FS+ ER L +I+ A ++
Sbjct: 119 NGLKSISQSTGSKNYIRLRCGIGRPPGRQDPADFVLSAFSAQERKELELMIECAADAV 176
>gi|294627825|ref|ZP_06706404.1| peptidyl-tRNA hydrolase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294666032|ref|ZP_06731294.1| peptidyl-tRNA hydrolase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292597739|gb|EFF41897.1| peptidyl-tRNA hydrolase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292604224|gb|EFF47613.1| peptidyl-tRNA hydrolase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 194
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D I A K E ++ ++ G L+KP
Sbjct: 6 LIVGLGNPGPEHAQTRHNAGFRFVDALIERGGARWALDSKLFGETAKVEIAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E+ LV HD+LDL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSITAALRFWKI-EPEHLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLG 148
G + RLR+GIG P ++ VLG
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVPWVLG 152
>gi|188994142|ref|YP_001928394.1| peptidyl-tRNA hydrolase [Porphyromonas gingivalis ATCC 33277]
gi|238691460|sp|B2RHF2|PTH_PORG3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|188593822|dbj|BAG32797.1| putative peptidyl-tRNA hydrolase [Porphyromonas gingivalis ATCC
33277]
Length = 185
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHN+GF ++ + + ++ A I+ ++ IL+KP
Sbjct: 3 YLIVGLGNIGGEYNGTRHNVGFRMVNALAEDGGVQFVEARYGA-IAHMRVKNAELILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M +P E LV+ DDL L FGTLRLK G DAGHNGLK+I+E
Sbjct: 62 NTYMNLSGNAVRYWMQQENIPR-EQVLVLVDDLALPFGTLRLKPKGSDAGHNGLKNIAEV 120
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNF 150
G +Y RLR G+G + VLG F
Sbjct: 121 MGSIDYARLRFGLGDEFSKGRQVDFVLGRF 150
>gi|21241721|ref|NP_641303.1| peptidyl-tRNA hydrolase [Xanthomonas axonopodis pv. citri str. 306]
gi|24418603|sp|Q8PNT8|PTH_XANAC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|21107090|gb|AAM35839.1| peptidyl tRNA hydrolase [Xanthomonas axonopodis pv. citri str. 306]
Length = 193
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D I A K E ++ ++ G L+KP
Sbjct: 6 LIVGLGNPGPEHAQTRHNAGFRFVDALIERSGARWALDSKLFGETAKVEVAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E+ LV HD+LDL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSITAALRFWKI-EPEHLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLG 148
G + RLR+GIG P ++ VLG
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVPWVLG 152
>gi|83644561|ref|YP_432996.1| peptidyl-tRNA hydrolase [Hahella chejuensis KCTC 2396]
gi|119390948|sp|Q2SLA3|PTH_HAHCH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|83632604|gb|ABC28571.1| peptidyl-tRNA hydrolase [Hahella chejuensis KCTC 2396]
Length = 195
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 93/154 (60%), Gaps = 4/154 (2%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+ GLGNPG +Y + RHN G + ++ + F KK H + + + G L+ P
Sbjct: 8 IVGLGNPGPDYAQTRHNAGALWLEHLARKKGQFLRPDKKLHGDYCKISIAGEDIHLLFPS 67
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMN SGQS+L + FYK+ LEN LV HD+LD+D GTLRLK GGG GHNGL+ I
Sbjct: 68 TFMNRSGQSVLSLSQFYKI-ELENILVAHDELDIDAGTLRLKFGGGHGGHNGLRDIIRCF 126
Query: 123 G--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G K++ R+R+GIG P D + + HVLG S +
Sbjct: 127 GGNKDFPRMRLGIGHPGDKSKVTSHVLGRISKED 160
>gi|15671994|ref|NP_266168.1| peptidyl-tRNA hydrolase [Lactococcus lactis subsp. lactis Il1403]
gi|13878665|sp|Q9CJI1|PTH_LACLA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|12722848|gb|AAK04110.1|AE006240_8 peptidyl-tRNA hydrolase [Lactococcus lactis subsp. lactis Il1403]
Length = 188
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 91/155 (58%), Gaps = 3/155 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + +HN+GFM +D + + +K F + ++ ++G + L+KP
Sbjct: 4 MIVGLGNPGDKYEKTKHNMGFMALDLLAKELNVDFKEEKPFMSLVASTFVNGEKLFLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+S+ ++ +Y + + V+HDDLD G +RL+ G G NG+KS+
Sbjct: 64 LTFMNESGRSVAPLLKYYNIDEAD-LTVMHDDLDSPVGRVRLRQKGSSGGQNGIKSVITH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + + R++IGIGRP + HVL F + ++
Sbjct: 123 VGSQTFNRVKIGIGRPKHGMTVGNHVLSGFDNEDK 157
>gi|256841993|ref|ZP_05547498.1| peptidyl-tRNA hydrolase [Parabacteroides sp. D13]
gi|256736309|gb|EEU49638.1| peptidyl-tRNA hydrolase [Parabacteroides sp. D13]
Length = 187
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 93/168 (55%), Gaps = 16/168 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAE----ISEGQLDGLRTI 57
+++ GLGN G EY RHNIGF ++ H + F E I+ ++ I
Sbjct: 3 YLITGLGNIGSEYWGTRHNIGFRVVN-----HLVESVGGNFTEERYGAIARIRVKNCDLI 57
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNL--ENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
++KP TFMNLSG + V + + N+ EN L++ DDL L FGTLRLK G DAGHNGL
Sbjct: 58 VLKPNTFMNLSGNA---VRYWLQKENILVENLLIVVDDLALPFGTLRLKPKGSDAGHNGL 114
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
K+I++ + Y RLR GIG I +VLG F PE L+P I
Sbjct: 115 KNIAQLLNTQEYSRLRFGIGSDFPRGGQIDYVLGKF-PPEELQLMPEI 161
>gi|195953329|ref|YP_002121619.1| peptidyl-tRNA hydrolase [Hydrogenobaculum sp. Y04AAS1]
gi|259535199|sp|B4U930|PTH_HYDS0 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|195932941|gb|ACG57641.1| Aminoacyl-tRNA hydrolase [Hydrogenobaculum sp. Y04AAS1]
Length = 188
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 97/186 (52%), Gaps = 10/186 (5%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+ GLGNPG +Y + +HNIGF ID + H +K + D LIKPQ
Sbjct: 5 LVGLGNPGPKYKDTKHNIGFKVIDEVAFKLHLKNPLEKYMSIVFHIKEQD---IYLIKPQ 61
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-ISEK 121
TFMN SG +L + + K+ + LVI+DD+DL GT+++K GG GHNG++S I E
Sbjct: 62 TFMNNSGIALRQFVEKTKIAP-SDILVIYDDMDLPIGTIKMKPNGGSGGHNGVESIIREL 120
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
+ + RLRIGIGRP + +VL SP Y PI+ A R L
Sbjct: 121 RTQEFPRLRIGIGRPASKEEVTNYVL----SPFEYKDTPIVKKTIEKASEYAIRSLEEPL 176
Query: 182 NHIVSV 187
+++++
Sbjct: 177 EYVMTL 182
>gi|15839231|ref|NP_299919.1| peptidyl-tRNA hydrolase [Xylella fastidiosa 9a5c]
gi|14195084|sp|Q9PA78|PTH_XYLFA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|9107873|gb|AAF85439.1|AE004071_7 peptidyl tRNA hydrolase [Xylella fastidiosa 9a5c]
Length = 192
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 95/173 (54%), Gaps = 5/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW--KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ + RHN GF +D + W + K A ++ + G L++
Sbjct: 6 LIVGLGNPGSEHTKTRHNAGFRFVDGLVQREG-QRWMLESKLFAHVARVFIAGQWVWLLR 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ ++F+K+ E LV HD+LD G +RLK GG G NGL+ I++
Sbjct: 65 PVTFMNLSGKSICAGLSFWKIKP-EQMLVAHDELDFPPGAVRLKFDGGHGGQNGLRDITK 123
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + RLR+GIG P ++ VLG + E + ++ + LPL+
Sbjct: 124 LLGHGRFHRLRVGIGHPGHKDRVVNWVLGCPTCEENIAIDAALERASAVLPLV 176
>gi|194225854|ref|XP_001500180.2| PREDICTED: similar to peptidyl-tRNA hydrolase 1 homolog [Equus
caballus]
Length = 214
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 7/169 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKK--KFHAEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W + + A+++ L + +L
Sbjct: 31 WLVAGLGNPGMP--RTRHSVGMAVLGQLARRLGVAESWARDRRCAADLALASLGDAQLVL 88
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS- 117
++P+ MN +G+S+ + L E YLV HD+LD G L LK GG GHNG++S
Sbjct: 89 LRPRRLMNANGRSVARAAELFGLTAEEVYLV-HDELDKPLGKLALKLGGSARGHNGVRSC 147
Query: 118 ISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
IS RLR+GIGRPP + HVLG FS E+ L P+++ A
Sbjct: 148 ISCLNSNAMPRLRVGIGRPPHPDAVQAHVLGCFSPAEQELLPPLLERAA 196
>gi|148284982|ref|YP_001249072.1| peptidyl-tRNA hydrolase [Orientia tsutsugamushi str. Boryong]
gi|146740421|emb|CAM80898.1| peptidyl-tRNA hydrolase [Orientia tsutsugamushi str. Boryong]
Length = 186
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 114/184 (61%), Gaps = 3/184 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
+V GLGNPG EY +RHN G++ +++I ++ K K+ ++I++ L G + I IKP
Sbjct: 2 LVVGLGNPGKEYANSRHNAGYIVLEQIAFYNNLSFSKSTKYKSDIAKILLLGQKIIFIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ + +FYKL N + +VIHDD+DL G ++LK GGG GHNGLKSIS
Sbjct: 62 LTYMNLSGTAVCLIKDFYKLQNYDI-IVIHDDIDLPLGIVKLKVGGGSGGHNGLKSISSA 120
Query: 122 CGKNYKRLRIGIGRP-PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R++IGIGRP + + +VL +F E L I IA ++ L +++ F
Sbjct: 121 IGDSYLRIKIGIGRPISEHLSVASYVLSDFLVEELTVLYSIARKIAENVELAVQKQFSEF 180
Query: 181 LNHI 184
+ I
Sbjct: 181 MFKI 184
>gi|121997778|ref|YP_001002565.1| peptidyl-tRNA hydrolase [Halorhodospira halophila SL1]
gi|166199335|sp|A1WVQ1|PTH_HALHL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|121589183|gb|ABM61763.1| peptidyl-tRNA hydrolase [Halorhodospira halophila SL1]
Length = 194
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 99/172 (57%), Gaps = 3/172 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++AGLGNPG +Y RHN GF +D + + + KF + + +DG L+KP
Sbjct: 10 LIAGLGNPGSKYAGTRHNAGFWLVDELVRRYGGELREEPKFRGDCARVLIDGYDCRLVKP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + NF+K+P E LV HD++DL G++RLK GGG GHNGL+ I
Sbjct: 70 MTYMNHSGQAVGALANFFKIPP-EAILVAHDEIDLPPGSVRLKRGGGHGGHNGLRHIQST 128
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G ++ RLR+G+G P ++ HVL S E L ID+ A +P L
Sbjct: 129 LGTPDFARLRLGVGHPGHKDQVVPHVLSRPSPDELRQLERAIDDAADQIPRL 180
>gi|289663465|ref|ZP_06485046.1| peptidyl-tRNA hydrolase [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 193
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 82/148 (55%), Gaps = 3/148 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D I A K E ++ + G L+KP
Sbjct: 6 LIVGLGNPGPEHAQTRHNAGFRFVDALIERSGARWALDSKLFGETAKVDIAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E+ LV HD+LDL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSVAAALRFWKI-EPEHLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLG 148
G + RLR+GIG P ++ VLG
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVSWVLG 152
>gi|297811751|ref|XP_002873759.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297319596|gb|EFH50018.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 239
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 92/156 (58%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG++Y RHN+GF ID + + A I G ++ + +L+KP
Sbjct: 45 WLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLVKP 104
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+S+ + + Y++P L + L+++D++ L G LRL+ GG HNG+KS+
Sbjct: 105 QTYMNFSGESVGSLASHYRVP-LRHILMLYDEMALPNGVLRLQPKGGQGYHNGVKSVMGH 163
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+N+ RL IGIG+PP + +L FS ER
Sbjct: 164 LDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLER 199
>gi|294789052|ref|ZP_06754292.1| aminoacyl-tRNA hydrolase [Simonsiella muelleri ATCC 29453]
gi|294483154|gb|EFG30841.1| aminoacyl-tRNA hydrolase [Simonsiella muelleri ATCC 29453]
Length = 190
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 101/170 (59%), Gaps = 3/170 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGN G EY RHN GF ID + ++ +KKF +++ + G L+KP
Sbjct: 5 LIVGLGNIGTEYEYTRHNAGFWLIDELAKQWNVSLREEKKFFGDVARARYHGEDIWLLKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + FYK+ + E LV+HD+LD+ G +R K GGG+ GHNGLK I K
Sbjct: 65 NTYMNLSGKAVGALAQFYKIQSNE-ILVVHDELDIGCGKIRFKLGGGNGGHNGLKDIQAK 123
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G ++ RLR+GIG P D ++ +VL S+ ER + ID +LP
Sbjct: 124 LGTPDFYRLRLGIGHPGDRNLVVSYVLNKPSAAERDLINQSIDKSLNALP 173
>gi|325914243|ref|ZP_08176593.1| peptidyl-tRNA hydrolase [Xanthomonas vesicatoria ATCC 35937]
gi|325539498|gb|EGD11144.1| peptidyl-tRNA hydrolase [Xanthomonas vesicatoria ATCC 35937]
Length = 193
Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 87/171 (50%), Gaps = 3/171 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D I K E ++ + G L+KP
Sbjct: 6 LIVGLGNPGPEHTQTRHNAGFRFVDALIERSGARWGLDSKLFGETAKVDIAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E LV HD++DL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSITAALRFWKI-EPEQMLVAHDEMDLAPGTARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G + RLR+GIG P ++ VLG + + +D LPL
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGRDDDAAIGNAVDAAIDVLPL 175
>gi|311113112|ref|YP_003984334.1| aminoacyl-tRNA hydrolase [Rothia dentocariosa ATCC 17931]
gi|310944606|gb|ADP40900.1| aminoacyl-tRNA hydrolase [Rothia dentocariosa ATCC 17931]
Length = 194
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 110/176 (62%), Gaps = 7/176 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQL--DGLRTI 57
+++ GLGNPG +Y + RHNIG M +D+I + +KK K A + EG+L G + +
Sbjct: 5 WLIVGLGNPGPQYAKTRHNIGQMVLDKI-AREMGSTFKKHSKASAVVVEGRLGMGGPKVV 63
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+K +MN SG + V FY + + ++ +V+HD+LD+ F T++LK GGG+ GHNGL+
Sbjct: 64 LMKSLGYMNTSGGPVSAVAKFYGI-DPDHIIVVHDELDIPFDTIKLKIGGGEGGHNGLRD 122
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I++ G K+Y R+R GIGRPP + +VL F++ E L +IDN ++ +L
Sbjct: 123 ITKALGTKDYYRVRAGIGRPPGRMNTADYVLKPFTAAEVKDLPFLIDNSVDAVAML 178
>gi|239622195|ref|ZP_04665226.1| peptidyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|322690787|ref|YP_004220357.1| peptidyl-tRNA hydrolase [Bifidobacterium longum subsp. longum JCM
1217]
gi|239514192|gb|EEQ54059.1| peptidyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|320455643|dbj|BAJ66265.1| peptidyl-tRNA hydrolase [Bifidobacterium longum subsp. longum JCM
1217]
Length = 199
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 12/164 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG--QLDGLRTI-- 57
+++AGLGNPG +Y + RHN+GFM D + K A + + LDG RT+
Sbjct: 6 WLIAGLGNPGKKYEDTRHNMGFMAADVLAERWTVNFADHKGLAMLGKSVMNLDG-RTVKF 64
Query: 58 -LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
L KP T+MN SG ++ + +Y++ ++ +VIHDD+DL+FG +++K GG GHNG+K
Sbjct: 65 FLAKPLTYMNDSGNAVASISAYYQI-EPDHIVVIHDDMDLEFGRIKVKAGGSAGGHNGIK 123
Query: 117 SISEKCGK-NYKRLRIGIGRPPDTA----HIIRHVLGNFSSPER 155
SI G Y R+R+G+G A + + VLG F +R
Sbjct: 124 SIDRSLGTPKYARVRMGVGHSKRGANAHDNTVNWVLGGFGPDQR 167
>gi|322433961|ref|YP_004216173.1| peptidyl-tRNA hydrolase [Acidobacterium sp. MP5ACTX9]
gi|321161688|gb|ADW67393.1| peptidyl-tRNA hydrolase [Acidobacterium sp. MP5ACTX9]
Length = 206
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 3/166 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY HN GF+ IDR+ ++ A + + G +L K
Sbjct: 1 MRLIVGLGNPGIEYQFTPHNAGFLAIDRLAEVFGTAVNNRRGKALTGKAVISGQEVLLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSG S+ ++ L + + +V++D+L + G LR++ G GHNG+KSIS
Sbjct: 61 PETFMNLSGLSVAALLQELGLSHQSDLIVLYDELAIPLGQLRIRERGSAGGHNGVKSISG 120
Query: 121 KCG-KNYKRLRIGIGR-PPDTAHIIRH-VLGNFSSPERYFLLPIID 163
G + + R+RIG+G+ P +T I+ + SP R +L +D
Sbjct: 121 VLGSEEWTRIRIGVGKQPTETGREIKAGGVDYLLSPMRRMMLQELD 166
>gi|325928010|ref|ZP_08189228.1| peptidyl-tRNA hydrolase [Xanthomonas perforans 91-118]
gi|325541624|gb|EGD13148.1| peptidyl-tRNA hydrolase [Xanthomonas perforans 91-118]
Length = 193
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D I A K E ++ Q+ G L+KP
Sbjct: 6 LIVGLGNPGPEHAQTRHNAGFRFVDALIERSGARWALDSKLFGETAKVQVAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E LV HD+LDL G RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSITAALRFWKI-EPEQLLVAHDELDLAPGIARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLG 148
G + RLR+GIG P ++ VLG
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVPWVLG 152
>gi|308388981|gb|ADO31301.1| putative peptidyl-tRNA hydrolase [Neisseria meningitidis alpha710]
gi|325202410|gb|ADY97864.1| peptidyl-tRNA hydrolase [Neisseria meningitidis M01-240149]
gi|325203880|gb|ADY99333.1| peptidyl-tRNA hydrolase [Neisseria meningitidis M01-240355]
gi|325206364|gb|ADZ01817.1| peptidyl-tRNA hydrolase [Neisseria meningitidis M04-240196]
gi|325207838|gb|ADZ03290.1| peptidyl-tRNA hydrolase [Neisseria meningitidis NZ-05/33]
Length = 192
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 99/176 (56%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
++ GLGNPG EY + RHN GF +D + AWK KKF E++ L
Sbjct: 7 MLVGLGNPGKEYEQTRHNAGFWFLDEL-------AWKWKASFKEEKKFFGEVARAALPDG 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 60 DVWLLKPATFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 118
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I K G +Y RLR+GI P D ++ +VL S+ R I D +A+SL
Sbjct: 119 LKDIQAKLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSTEHRR---QIDDAVAKSL 171
>gi|254671940|emb|CBA04310.1| Peptidyl-tRNA hydrolase [Neisseria meningitidis alpha275]
Length = 192
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 99/176 (56%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
++ GLGNPG EY + RHN GF +D + AWK KKF E++ L
Sbjct: 7 MLVGLGNPGKEYEQTRHNAGFWFLDEL-------AWKWKASFKEEKKFFGEVARAALPDG 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 60 DVWLLKPTTFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 118
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I K G +Y RLR+GI P D ++ +VL S+ R I D +A+SL
Sbjct: 119 LKDIQAKLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSTEHRR---QIDDAVAKSL 171
>gi|51599038|ref|YP_073226.1| peptidyl-tRNA hydrolase [Borrelia garinii PBi]
gi|68052917|sp|Q65ZY7|PTH_BORGA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|51573609|gb|AAU07634.1| peptidyl-tRNA hydrolase [Borrelia garinii PBi]
Length = 185
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 84/135 (62%), Gaps = 7/135 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN+GF +DRI S + F KKK+ E SE ++ R IL+KP
Sbjct: 1 MILGLGNPGLEFSLTRHNVGFSLLDRIISKNGLFLKRKKKY--EYSEMRMISGRVILVKP 58
Query: 62 QTFMNLSGQSLLEVM-NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
T+MNLSG + +FY ++N LV+ D++DL G RLK GG + HNGLKSIS
Sbjct: 59 LTYMNLSGSLFPSIFSDFYMC--IKNLLVVLDNVDLPLGKCRLKERGGASTHNGLKSISS 116
Query: 121 KCG-KNYKRLRIGIG 134
G NY RL IG+G
Sbjct: 117 ILGSSNYSRLYIGVG 131
>gi|224823794|ref|ZP_03696903.1| Aminoacyl-tRNA hydrolase [Lutiella nitroferrum 2002]
gi|224604249|gb|EEG10423.1| Aminoacyl-tRNA hydrolase [Lutiella nitroferrum 2002]
Length = 194
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 98/178 (55%), Gaps = 18/178 (10%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEG-QLDG 53
++ GLGNPG EY + RHN GF +D + AW+ KF E++ Q G
Sbjct: 6 LIVGLGNPGPEYEKTRHNAGFWLVDEL-------AWQHKAALRGEGKFFGEVARAPQPGG 58
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
L+KP TFMNLSGQ++ + FYK+ E LV+HD+LDL GT R K GGG GHN
Sbjct: 59 SDLWLLKPMTFMNLSGQAVAALARFYKIAP-EEILVVHDELDLQPGTARFKQGGGHGGHN 117
Query: 114 GLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
GLK I + G N+ RLR+GIG P + + ++ VL S E+ + + R LP
Sbjct: 118 GLKDIIARLGTPNFWRLRLGIGHPGERSEVVGFVLKKPRSEEQGAIEDAMAAALRVLP 175
>gi|239996493|ref|ZP_04717017.1| peptidyl-tRNA hydrolase [Alteromonas macleodii ATCC 27126]
Length = 193
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 94/177 (53%), Gaps = 5/177 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G ++++ + P + KF + + + G L+ P
Sbjct: 6 LIVGLGNPGPEYENTRHNAGEWFLNQLADTYNAPLKPETKFFGKTARITVAGKDIRLLYP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ++ + NFY++ E LV D+LDL G + K GG + NG++ I K
Sbjct: 66 TTFMNKSGQAVAALANFYRI-EPEQILVAFDELDLPPGVAKYKVGGSSS-QNGVRDIVAK 123
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G KN+ RLRIGIG P + + HVLG + E+ + ID R +L K +
Sbjct: 124 MGNNKNFLRLRIGIGHPGHKSRVTGHVLGKPPAEEKAAIESAIDEAVRCTEILLKED 180
>gi|124025041|ref|YP_001014157.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. NATL1A]
gi|166229433|sp|A2C082|PTH_PROM1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|123960109|gb|ABM74892.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. NATL1A]
Length = 202
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH--FFPAWKKKFHAEISEGQLDGL-RTILI 59
++ GLGNPG EY + RHN+GFM ++ I + F KK F G G+ +T L+
Sbjct: 8 LLVGLGNPGTEYEKTRHNVGFMVLEEIARKNNCSFRESKKIFGRTCEYG--SGIEKTRLL 65
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SG+S+ +++ N +V+ DD+DL G +R+++ G GHNGLKSI
Sbjct: 66 MPNTYMNESGKSVRLAKDWFNFQN-NQLIVLVDDMDLPLGKIRVRSKGSSGGHNGLKSII 124
Query: 120 EKCGK-NYKRLRIGIGRPPD-----TAHIIRHVLGNFSSPERYFLLPIIDNI 165
G +KRL+IGIG P + + + HVLG FS E L II I
Sbjct: 125 NHLGTAEFKRLKIGIGAPSNDQQERKSKTVSHVLGRFSKEEFIILNFIIQEI 176
>gi|88704032|ref|ZP_01101747.1| Peptidyl-tRNA hydrolase [Congregibacter litoralis KT71]
gi|88701859|gb|EAQ98963.1| Peptidyl-tRNA hydrolase [Congregibacter litoralis KT71]
Length = 207
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGF-MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN G + + + K+H E++E G + ++ P
Sbjct: 7 LIVGLGNPGSQYEGTRHNAGEDFARELVRQAGGTFKLETKYHGELAEVFFAGHKLRVLVP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+S+ + NFYK+ + L+ HD+LD+ GT R K GG GHNGL+ I
Sbjct: 67 HTFMNRSGKSVAALANFYKIEPAQ-ILIAHDELDIAPGTARFKFDGGHGGHNGLRDIVPA 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G K++ RLR+GIG P + +VL S +R + ID
Sbjct: 126 LGNRKDFHRLRVGIGHPGSAKQVSNYVLSKASPADREAIAASID 169
>gi|255642567|gb|ACU21547.1| unknown [Glycine max]
Length = 202
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG ++ RHN+GF ID + P A +G + + L KP
Sbjct: 18 WLFVGLGNPGEKFKGTRHNVGFEMIDALAESQGIPMDTVHSKAISGKGFVGEVPVFLAKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QT+MNLSG+S + +YKLP L LV HDD++L G LRL GG H GLKS+
Sbjct: 78 QTYMNLSGESAGPLAAYYKLP-LNQVLVFHDDMNLPCGVLRLHDKGGHGSHKGLKSVIYH 136
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K + + RLRIGIG PP +L F+ R
Sbjct: 137 FKGNREFPRLRIGIGSPPGQMDPKAFLLQKFNVTAR 172
>gi|23335260|ref|ZP_00120497.1| COG0193: Peptidyl-tRNA hydrolase [Bifidobacterium longum DJO10A]
gi|23465593|ref|NP_696196.1| peptidyl-tRNA hydrolase [Bifidobacterium longum NCC2705]
gi|189439641|ref|YP_001954722.1| peptidyl-tRNA hydrolase [Bifidobacterium longum DJO10A]
gi|213692706|ref|YP_002323292.1| Aminoacyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|227546192|ref|ZP_03976241.1| aminoacyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|296453841|ref|YP_003660984.1| aminoacyl-tRNa hydrolase [Bifidobacterium longum subsp. longum
JDM301]
gi|312133039|ref|YP_004000378.1| pth [Bifidobacterium longum subsp. longum BBMN68]
gi|317481856|ref|ZP_07940883.1| peptidyl-tRNA hydrolase [Bifidobacterium sp. 12_1_47BFAA]
gi|322688797|ref|YP_004208531.1| peptidyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
157F]
gi|46576826|sp|Q8G5I6|PTH_BIFLO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238692067|sp|B3DSV5|PTH_BIFLD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783853|sp|B7GTK5|PTH_BIFLI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|23326261|gb|AAN24832.1| peptidyl-tRNA hydrolase [Bifidobacterium longum NCC2705]
gi|189428076|gb|ACD98224.1| Peptidyl-tRNA hydrolase [Bifidobacterium longum DJO10A]
gi|213524167|gb|ACJ52914.1| Aminoacyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|227213173|gb|EEI81045.1| aminoacyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|291517135|emb|CBK70751.1| peptidyl-tRNA hydrolase [Bifidobacterium longum subsp. longum F8]
gi|296183272|gb|ADH00154.1| Aminoacyl-tRNA hydrolase [Bifidobacterium longum subsp. longum
JDM301]
gi|311774028|gb|ADQ03516.1| Pth [Bifidobacterium longum subsp. longum BBMN68]
gi|316916647|gb|EFV38042.1| peptidyl-tRNA hydrolase [Bifidobacterium sp. 12_1_47BFAA]
gi|320458862|dbj|BAJ69483.1| peptidyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|320460133|dbj|BAJ70753.1| peptidyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
157F]
Length = 199
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 12/164 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG--QLDGLRTI-- 57
+++AGLGNPG +Y + RHN+GFM D + K A + + LDG RT+
Sbjct: 6 WLIAGLGNPGKKYEDTRHNMGFMTADVLAERWTVNFADHKGLAMLGKSVMNLDG-RTVKF 64
Query: 58 -LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
L KP T+MN SG ++ + +Y++ ++ +VIHDD+DL+FG +++K GG GHNG+K
Sbjct: 65 FLAKPLTYMNDSGNAVASISAYYQI-EPDHIVVIHDDMDLEFGRIKVKAGGSAGGHNGIK 123
Query: 117 SISEKCGK-NYKRLRIGIGRPPDTA----HIIRHVLGNFSSPER 155
SI G Y R+R+G+G A + + VLG F +R
Sbjct: 124 SIDRSLGTPKYARVRMGVGHSKRGANAHDNTVNWVLGGFGPDQR 167
>gi|224531784|ref|ZP_03672416.1| peptidyl-tRNA hydrolase [Borrelia valaisiana VS116]
gi|224511249|gb|EEF81655.1| peptidyl-tRNA hydrolase [Borrelia valaisiana VS116]
Length = 188
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 89/156 (57%), Gaps = 8/156 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ RHN+GF +D+I S + F KKK+ E SE ++ R IL+K
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIVSKNGLFLKRKKKY--EYSELKMISRRVILVK 60
Query: 61 PQTFMNLSGQSL-LEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSG L +FY ++N LV+ D++DL G RLK GG + HNGLKSIS
Sbjct: 61 PLTYMNLSGSIFPLIFSDFYMC--IKNLLVVLDNVDLPLGKCRLKERGGVSTHNGLKSIS 118
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G NY RL IG+G I VL F E
Sbjct: 119 SVLGSSNYSRLYIGVGSNV-MCDIKSFVLSKFCKDE 153
>gi|148243439|ref|YP_001228596.1| peptidyl-tRNA hydrolase [Synechococcus sp. RCC307]
gi|147851749|emb|CAK29243.1| Peptidyl-tRNA hydrolase [Synechococcus sp. RCC307]
Length = 201
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 113/197 (57%), Gaps = 12/197 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF--FPAWKKKFHAEISE-GQLDGLRTI 57
M ++ GLGNPG +Y RHN+GFM +DR+ + F A K H ++++ GQ D R
Sbjct: 4 MMLLVGLGNPGSKYDGTRHNVGFMALDRLAAAGSGSFRA-NTKLHGDLADIGQGD-RRLR 61
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KPQT+MN SG+++ ++++ E LVI DD+DL G LRL+ GG GHNGL+S
Sbjct: 62 LLKPQTYMNDSGRAIRASLDWFGW-TPEQLLVIVDDMDLPLGRLRLRLNGGAGGHNGLRS 120
Query: 118 -ISEKCGKNYKRLRIGIGRPPDTAH-----IIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
I+ G+ + RLRIGIG P ++ + HVLGNF ER L ++ + + L
Sbjct: 121 TIAHLGGEAFARLRIGIGAPGTSSEERKEGTVGHVLGNFHPAERPLLDEVLQEVEHGIGL 180
Query: 172 LAKREDVSFLNHIVSVR 188
+ ++ N I S R
Sbjct: 181 IQRQGFERAGNRINSFR 197
>gi|269792683|ref|YP_003317587.1| peptidyl-tRNA hydrolase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100318|gb|ACZ19305.1| peptidyl-tRNA hydrolase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 199
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 85/140 (60%), Gaps = 3/140 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG-QLDGLRTILI 59
M ++ GLGNPG +Y RHN+G++ D + + +++F + + + LDG L+
Sbjct: 1 MRLIVGLGNPGPQYVWTRHNVGWLAADHLAQSLGLGSPRERFDSLLWDRFALDGEPCCLM 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+++ + + FYKL + ++ +VI+DD+ L FG LR++ G G G+ SI
Sbjct: 61 KPTTYMNLSGRAVAQAVRFYKL-DPQDVMVIYDDVALPFGRLRMRDRGSAGGQKGMGSII 119
Query: 120 EKCGK-NYKRLRIGIGRPPD 138
G R+R+G+G PPD
Sbjct: 120 GALGTLEIPRIRVGVGSPPD 139
>gi|224475644|ref|YP_002633250.1| peptidyl-tRNA hydrolase [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254783887|sp|B9DLD9|PTH_STACT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|222420251|emb|CAL27065.1| pth [Staphylococcus carnosus subsp. carnosus TM300]
Length = 190
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 105/170 (61%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + + +HNIGF ID + + F K+KF + +L G + +LI+
Sbjct: 1 MKCIVGLGNIGKRFEQTKHNIGFEVIDYLLESNQFKLDKQKFRGAYTIERLGGEKVLLIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + + E+ LV++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVGPLMDYYNV-DPEDLLVLYDDLDLPQGQVRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G N+KR+RIGIGRP + + +VL FS E + +I++ A ++
Sbjct: 120 HLGTDNFKRIRIGIGRPTNGMSVPDYVLQKFSKQEMETMNKVIEHSAHAV 169
>gi|224052908|ref|XP_002297632.1| predicted protein [Populus trichocarpa]
gi|222844890|gb|EEE82437.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG ++ RHN+GF ID A EG + +L KP
Sbjct: 23 WLFVGLGNPGEKFKGTRHNVGFEMIDAFAGSLGISMNIPLCKALFGEGFVGDAPVLLAKP 82
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QT+MNLSG+S + +YKLP L +V HDD++L G LRL+ GG H GLKS+
Sbjct: 83 QTYMNLSGESAGPLAAYYKLP-LNRVIVFHDDMELPCGVLRLQEKGGHGCHRGLKSVINH 141
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + + RLRIGIGRPP +L F++ R
Sbjct: 142 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATAR 177
>gi|297568583|ref|YP_003689927.1| peptidyl-tRNA hydrolase [Desulfurivibrio alkaliphilus AHT2]
gi|296924498|gb|ADH85308.1| peptidyl-tRNA hydrolase [Desulfurivibrio alkaliphilus AHT2]
Length = 197
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 103/186 (55%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG EY RHN+GF+ D + H +KK+ AE+ G L G +L+
Sbjct: 1 MRLLVGLGNPGGEYELTRHNVGFIFTDYLADRHGISLKNEKKWDAEVGRGTLWGQPVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG ++ ++ F++L + +V D+LDL G RL G G GHNG+KS+
Sbjct: 61 KPLTYMNRSGLAVGKIARFFQLEP-TSVVVFQDELDLPLGACRLVQGRGAGGHNGIKSLM 119
Query: 120 EK-CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ +++ R RIG+GRPP VL FS E + ++ + + +L KR+
Sbjct: 120 DHLASRDFVRFRIGVGRPPAARAAAGFVLARFSPAELQVVDKLLPFLEEGVEMLLKRDLQ 179
Query: 179 SFLNHI 184
+ +N +
Sbjct: 180 AAMNLV 185
>gi|189184106|ref|YP_001937891.1| peptidyl-tRNA hydrolase [Orientia tsutsugamushi str. Ikeda]
gi|189180877|dbj|BAG40657.1| peptidyl-tRNA hydrolase [Orientia tsutsugamushi str. Ikeda]
Length = 186
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 113/184 (61%), Gaps = 3/184 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
+V GLGNPG EY +RHN G++ +++I ++ K K+ ++I++ L G + I IKP
Sbjct: 2 LVVGLGNPGKEYANSRHNAGYIVLEQIALYNDLSFSKSTKYKSDIAKILLLGKKIIFIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ + +FYKL N + +VIHDD+DL G ++LK GGG GHNGLKSIS
Sbjct: 62 LTYMNLSGTAVCLIKDFYKLQNYDI-IVIHDDIDLPLGIVKLKVGGGSGGHNGLKSISSA 120
Query: 122 CGKNYKRLRIGIGRP-PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R++IGIGRP + + +VL +F E L I IA + L +++ F
Sbjct: 121 IGDSYLRIKIGIGRPLSEHLSVASYVLSDFLVTELTVLYSIARKIAENFELAVQKQFSEF 180
Query: 181 LNHI 184
+ I
Sbjct: 181 MFKI 184
>gi|269214014|ref|ZP_06158301.1| aminoacyl-tRNA hydrolase [Neisseria cinerea ATCC 14685]
gi|269144805|gb|EEZ71223.1| aminoacyl-tRNA hydrolase [Neisseria cinerea ATCC 14685]
Length = 196
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 98/176 (55%), Gaps = 20/176 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--------KKFHAEISEGQLDGL 54
+V GLGNPG EY + RHN GF +D + AWK KKF E++ L
Sbjct: 11 MVVGLGNPGKEYEQTRHNAGFWFLDEL-------AWKWKASFKEEKKFFGEVARAALPDG 63
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 64 DVWLLKPTTFMNRSGQAVAALTQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNG 122
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LK I + G +Y RLR+GI P D ++ +VL S R I D IA+SL
Sbjct: 123 LKDIQARLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSVEHRQ---QIDDAIAKSL 175
>gi|262369400|ref|ZP_06062728.1| peptidyl-tRNA hydrolase [Acinetobacter johnsonii SH046]
gi|262315468|gb|EEY96507.1| peptidyl-tRNA hydrolase [Acinetobacter johnsonii SH046]
Length = 193
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 98/183 (53%), Gaps = 2/183 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++R+ + K KF+ G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFVERLAEQYGITLKKDPKFNGMSGRGNIEGQDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNL G+S++ FY + + L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 TTFMNLVGKSVVPFAKFYNIAP-DAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVL S E+ + I + +L E +
Sbjct: 125 IGPNFHRLRIGIGHPGSKERVSGHVLSKAPSNEQNLMDDAIHHALARTKMLVNGEIQPAM 184
Query: 182 NHI 184
N I
Sbjct: 185 NQI 187
>gi|218187457|gb|EEC69884.1| hypothetical protein OsI_00266 [Oryza sativa Indica Group]
Length = 259
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 90/156 (57%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG +Y RHN+GF +DRI + + + G + + +L+KP
Sbjct: 65 WLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKP 124
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
Q+++N SG+++ + +Y++P L + LV++D++ L G LRL+ GG HNGL+++ E
Sbjct: 125 QSYINYSGEAIGPLAAYYQVP-LRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVMEC 183
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ RL IGIG PP +L FSS E+
Sbjct: 184 LDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEEQ 219
>gi|219685941|ref|ZP_03540739.1| aminoacyl-tRNA hydrolase [Borrelia garinii Far04]
gi|219672515|gb|EED29556.1| aminoacyl-tRNA hydrolase [Borrelia garinii Far04]
Length = 188
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ RHN+GF +D+I S + F KKK+ E SE ++ R IL+K
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIISKNGLFLKRKKKY--EYSELRMISGRVILVK 60
Query: 61 PQTFMNLSGQSLLEVM-NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSG + +FY ++N LV+ D++DL G RLK GG + HNGLKSIS
Sbjct: 61 PLTYMNLSGSLFPSIFSDFYMC--IKNLLVVLDNVDLPLGKCRLKERGGASTHNGLKSIS 118
Query: 120 EKCG-KNYKRLRIGIG 134
G NY RL IG+G
Sbjct: 119 SALGSSNYSRLYIGVG 134
>gi|319949665|ref|ZP_08023699.1| Peptidyl-tRNA hydrolase [Dietzia cinnamea P4]
gi|319436656|gb|EFV91742.1| Peptidyl-tRNA hydrolase [Dietzia cinnamea P4]
Length = 200
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 106/175 (60%), Gaps = 6/175 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPA---WKKKFHAEISEGQLDGLRTIL 58
+V GL NPG +Y RHNIG+ + + S PA KK + EI++ +L G +L
Sbjct: 12 LVVGLANPGPDYEGTRHNIGWDVLQELASRALPMPASFSTHKKTNCEIAQIRLAGTPVVL 71
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+P+++MNLSG + V ++ + + +VIHD++D+DFG +RLK GGG+ GHNGL+S+
Sbjct: 72 ARPRSYMNLSGGPVAAVAKYFSVAP-TDVIVIHDEIDIDFGQVRLKRGGGEGGHNGLRSV 130
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
S G ++Y R+R G+GRPP + VL FS E+ + ++ + A ++ LL
Sbjct: 131 SSSLGTRDYIRVRAGVGRPPGRMAVADFVLKRFSKLEQPDVPFLVQDAADAVELL 185
>gi|255645293|gb|ACU23143.1| unknown [Glycine max]
Length = 218
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG ++ RHN+GF ID P A +G + + L KP
Sbjct: 18 WLFVGLGNPGDKFKGTRHNVGFEMIDAFAESQGIPMDTVHSKAIFGKGFVGEVPVFLAKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI--S 119
QT+MNLSG+S + +YKLP L LV HDD++L G LRL GG H GLKS+ +
Sbjct: 78 QTYMNLSGESTGPLAAYYKLP-LNQVLVFHDDMNLPCGVLRLHDKGGHGSHKGLKSVIYN 136
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + + RLRIGIG PP +L F+ R
Sbjct: 137 FRGNREFPRLRIGIGSPPGQMDPKAFLLQKFNVTAR 172
>gi|170718048|ref|YP_001785087.1| peptidyl-tRNA hydrolase [Haemophilus somnus 2336]
gi|189038153|sp|B0UVY6|PTH_HAES2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|168826177|gb|ACA31548.1| Aminoacyl-tRNA hydrolase [Haemophilus somnus 2336]
Length = 194
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 96/160 (60%), Gaps = 5/160 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+F + + KF + + + G + P
Sbjct: 6 LIVGLGNPGDKYADTRHNAGEWLIERLARRFNFNLSVESKFSGKTARAVISGQEMRFLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++P E LV+HD+LDL G +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVSALANFYRIPP-EQILVLHDELDLPPGIAKLKQGGGHGGHNGLKDIIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL 159
KN+ RLRIGIG P D + +VL N SP + L+
Sbjct: 125 LANNKNFYRLRIGIGHPGDKNLVASYVL-NKPSPTDWQLI 163
>gi|184201365|ref|YP_001855572.1| peptidyl-tRNA hydrolase [Kocuria rhizophila DC2201]
gi|183581595|dbj|BAG30066.1| peptidyl-tRNA hydrolase [Kocuria rhizophila DC2201]
Length = 208
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 106/184 (57%), Gaps = 4/184 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTILIK 60
+V GLGNPG Y RHNIG + + + + + A ++E ++ R +L +
Sbjct: 19 LVVGLGNPGGRYAGTRHNIGAVVVAELAARAGARLSAHRARAAVAETRMRPGAPRLVLAQ 78
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P ++MN+SG + + +Y L L + +V+HDD+DL FG ++LK GGG+ GHNGL+ I++
Sbjct: 79 PLSYMNVSGGPVSALAKYYSL-GLADLVVVHDDIDLPFGAVKLKRGGGEGGHNGLRDITK 137
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
GK+Y R+R+G+GRPP +VL FS E L ++ + A ++ +L +++ +
Sbjct: 138 AMGGKDYVRVRVGVGRPPGRMDTADYVLKRFSGAEAKELPLLVSDAADAVEMLTEQDLTA 197
Query: 180 FLNH 183
H
Sbjct: 198 AQQH 201
>gi|224282805|ref|ZP_03646127.1| peptidyl-tRNA hydrolase [Bifidobacterium bifidum NCIMB 41171]
gi|310287259|ref|YP_003938517.1| Peptidyl-tRNA hydrolase [Bifidobacterium bifidum S17]
gi|311064108|ref|YP_003970833.1| peptidyl-tRNA hydrolase Pth [Bifidobacterium bifidum PRL2010]
gi|313139964|ref|ZP_07802157.1| peptidyl-tRNA hydrolase [Bifidobacterium bifidum NCIMB 41171]
gi|309251195|gb|ADO52943.1| Peptidyl-tRNA hydrolase [Bifidobacterium bifidum S17]
gi|310866427|gb|ADP35796.1| Pth Peptidyl-tRNA hydrolase [Bifidobacterium bifidum PRL2010]
gi|313132474|gb|EFR50091.1| peptidyl-tRNA hydrolase [Bifidobacterium bifidum NCIMB 41171]
Length = 199
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 91/163 (55%), Gaps = 10/163 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD----GLRTI 57
+++ GLGNPG +Y RHN+GFM D + K A + +G ++ ++
Sbjct: 6 WLIVGLGNPGKKYEGTRHNMGFMTADILAERWSVAFSDHKGLAMLGKGAMNLQGRNVKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SG ++ + +Y++ ++ +VIHDD+DL+FG +++K GG GHNG+KS
Sbjct: 66 LAKPLTYMNDSGNAVASISAYYQI-QPDHVVVIHDDMDLEFGRIKVKAGGSAGGHNGIKS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDTAH----IIRHVLGNFSSPER 155
I + Y R+R+G+G AH + VLG F +R
Sbjct: 125 IDKALSTPKYARVRMGVGHAQRGAHAHDNTVNWVLGGFGPDQR 167
>gi|238020996|ref|ZP_04601422.1| hypothetical protein GCWU000324_00893 [Kingella oralis ATCC 51147]
gi|237867976|gb|EEP68982.1| hypothetical protein GCWU000324_00893 [Kingella oralis ATCC 51147]
Length = 190
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 102/171 (59%), Gaps = 10/171 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILIK 60
++ GLGNP EY RHN GF ID + ++ + K KKFH +I+ L+K
Sbjct: 5 LIVGLGNPTAEYEHTRHNAGFWFIDEL-AWQWKAQLKSEKKFHGDIARVAQPQGDVWLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ ++ FYK+ E LV+HD+LD+ G +R K GGG+ GHNGLK I
Sbjct: 64 PDTYMNLSGKAVAALVQFYKI-QPEEILVVHDELDIPCGQIRYKLGGGNGGHNGLKDIQA 122
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN-IARSL 169
K G N+ RLR+GIG P D ++ VL + ER +IDN IA+SL
Sbjct: 123 KLGTPNFYRLRLGIGHPGDRNLVVGFVLSKPPASERQ----LIDNAIAKSL 169
>gi|224079329|ref|XP_002305823.1| predicted protein [Populus trichocarpa]
gi|222848787|gb|EEE86334.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 89/156 (57%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF IDRI + A I G + + +L KP
Sbjct: 50 WLIVGLGNPGTKYHGTRHNVGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAKP 109
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q +MN SG+S+ + YK+P L + L+I+D+++L G LR++ GG HNG+KS+ +
Sbjct: 110 QAYMNFSGESVGPLAAHYKIP-LRHILLIYDEMNLPNGILRVQPKGGHGHHNGVKSVMDH 168
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + RL IGIG PP T + +L FS ER
Sbjct: 169 LDGCREFPRLCIGIGNPPGTMDMKAFLLQKFSPTER 204
>gi|219684911|ref|ZP_03539852.1| peptidyl-tRNA hydrolase [Borrelia garinii PBr]
gi|219671649|gb|EED28705.1| peptidyl-tRNA hydrolase [Borrelia garinii PBr]
Length = 188
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ RHN+GF +D+I S + F KKK+ E SE ++ R IL+K
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIISKNGLFLKRKKKY--EYSELRMISGRVILVK 60
Query: 61 PQTFMNLSGQSLLEVM-NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSG + +FY ++N LV+ D++DL G RLK GG + HNGLKSIS
Sbjct: 61 PLTYMNLSGSLFPSIFSDFYMC--IKNLLVVLDNVDLPLGKCRLKERGGASTHNGLKSIS 118
Query: 120 EKCG-KNYKRLRIGIG 134
G NY RL IG+G
Sbjct: 119 SALGSSNYSRLYIGVG 134
>gi|317502722|ref|ZP_07960833.1| aminoacyl-tRNA hydrolase [Prevotella salivae DSM 15606]
gi|315666166|gb|EFV05722.1| aminoacyl-tRNA hydrolase [Prevotella salivae DSM 15606]
Length = 190
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 93/168 (55%), Gaps = 9/168 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTIL 58
F++ GLGNPG EY E RHN GFM +D + + HF + K + I+E L G + IL
Sbjct: 4 FLICGLGNPGDEYQETRHNTGFMVLDAFAKASNIHF----EDKRYGFIAETTLKGRKLIL 59
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP TFMNLSG ++ +N + LVI DD+ L G RLK G + GHNGL I
Sbjct: 60 LKPTTFMNLSGNAVRYWLNKENIDQ-SRLLVISDDIALPLGAFRLKANGNNGGHNGLGHI 118
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
+ G NY RLR+GIG + VLG + ++ L P I NIA
Sbjct: 119 QQLIGTNYARLRMGIGNDYPKGGQVDWVLGKYDDNDKTILQPSI-NIA 165
>gi|295396692|ref|ZP_06806838.1| aminoacyl-tRNA hydrolase [Brevibacterium mcbrellneri ATCC 49030]
gi|294970438|gb|EFG46367.1| aminoacyl-tRNA hydrolase [Brevibacterium mcbrellneri ATCC 49030]
Length = 194
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 103/173 (59%), Gaps = 6/173 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH---SFHFFPAWKKKFHAEISE-GQLDGLRTI 57
+++ GLGNPG Y RHNIG M +D + + A + + G + G + +
Sbjct: 3 YLIIGLGNPGPRYANTRHNIGHMVLDELARRCGATLVSTKTRALAASVGDLGGVVGTKAV 62
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+K T+MN SG + ++ +FY + + E+ + IHDD+DL F +++LK GGG+ GHNGL+S
Sbjct: 63 LMKSATYMNESGIPVRQLADFYSI-DPEHVIAIHDDVDLPFDSIKLKLGGGEGGHNGLRS 121
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+S+ G ++Y R+R G+GRPP +VL NFSS ER L + + A ++
Sbjct: 122 MSKHLGTRDYLRVRAGVGRPPGRMDTADYVLQNFSSTERKDLPIFVSDCADAV 174
>gi|325268128|ref|ZP_08134774.1| aminoacyl-tRNA hydrolase [Kingella denitrificans ATCC 33394]
gi|324980513|gb|EGC16179.1| aminoacyl-tRNA hydrolase [Kingella denitrificans ATCC 33394]
Length = 192
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 105/181 (58%), Gaps = 7/181 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILIK 60
++ GLGNP EY RHN GF +D + ++ + +K KKF +++ L+K
Sbjct: 5 LIVGLGNPTAEYEHTRHNAGFWFLDEL-AWQWKATFKNEKKFFGDVARVARPEGDVWLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + NFYK+ E LV+HD+LD+D G +R K GGG+ GHNGLK I
Sbjct: 64 PDTYMNLSGKAVQALANFYKI-QPEEILVVHDELDIDCGAIRFKLGGGNGGHNGLKDIQA 122
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP--LLAKRED 177
K G + RLR+GIG P D ++ VL S+ ER + I R++ + ++ED
Sbjct: 123 KLGTPQFYRLRLGIGHPGDKHLVVGFVLNKPSAAERELIDRAIAKSLRAMDDVMAGRQED 182
Query: 178 V 178
V
Sbjct: 183 V 183
>gi|256833156|ref|YP_003161883.1| peptidyl-tRNA hydrolase [Jonesia denitrificans DSM 20603]
gi|256686687|gb|ACV09580.1| peptidyl-tRNA hydrolase [Jonesia denitrificans DSM 20603]
Length = 205
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 105/180 (58%), Gaps = 9/180 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH-------SFHFFPAWKKKFHAEISEGQLDGL 54
++ GLGNPG +Y NRHN+G M +D + + H A + I G G
Sbjct: 9 LLIVGLGNPGPKYAANRHNLGHMVLDVLAGRANATFTSHRSNADVARIRLGILPGGRPGP 68
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
IL KP+T+MN+SG + + +Y + + E+ +V+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 69 SVILAKPRTYMNVSGGPVAALAAYYGV-DPESIIVVHDELDIPAGDIKCKIGGGEGGHNG 127
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
LK I++ G KNY R+R GIGRPP + +VL NFSS E L ++++A + L+A
Sbjct: 128 LKDITKALGTKNYIRVRGGIGRPPGRMDVADYVLKNFSSSEIKELPLFLNDLADCVELIA 187
>gi|262197680|ref|YP_003268889.1| peptidyl-tRNA hydrolase [Haliangium ochraceum DSM 14365]
gi|262081027|gb|ACY16996.1| peptidyl-tRNA hydrolase [Haliangium ochraceum DSM 14365]
Length = 217
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 92/141 (65%), Gaps = 6/141 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGL----RT 56
M+++ GLGNPG +Y RHNIGF ID + + +++ KF E+ G ++ +
Sbjct: 1 MWLLVGLGNPGRKYERTRHNIGFRAIDELARRNDMGSFRSKFGGEVLSGMINARGRRHKA 60
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L+KP FMNLSG ++ + F+ + + LV+HD+LD+DFG L+LK GGG GHNGL+
Sbjct: 61 VLLKPMEFMNLSGYAVQRAVQFHDI-EPSSILVLHDELDIDFGRLKLKAGGGHGGHNGLR 119
Query: 117 SISEKCGKN-YKRLRIGIGRP 136
S+ E+ G N + R+R+G+G+P
Sbjct: 120 SMIEQLGSNAFLRVRMGVGKP 140
>gi|116515063|ref|YP_802692.1| hypothetical protein BCc_123 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|122285541|sp|Q057V0|PTH_BUCCC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116256917|gb|ABJ90599.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. Cc (Cinara
cedri)]
Length = 192
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 88/148 (59%), Gaps = 4/148 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGN ++Y + RHN+GF I+ + SF+ +KKKF +S L+ + L+KP
Sbjct: 6 MIVGLGNSVYKYNQTRHNVGFWYINMLSSFYKTSLKFKKKFSGYVSSFFLNNNKIFLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMNL+G S+ + +FYK+ L LV+ D+LDL G L++K G G GHNG+KSI
Sbjct: 66 DLFMNLNGYSVFALSSFYKIK-LSEILVVRDELDLSPGILKVKYGIGHNGHNGVKSIINT 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVL 147
K + +L IGIGRP ++ VL
Sbjct: 125 FEKKKPFIQLCIGIGRPEFKKNVSNFVL 152
>gi|325684690|gb|EGD26844.1| aminoacyl-tRNA hydrolase [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 185
Score = 101 bits (252), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 90/156 (57%), Gaps = 3/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ LGNPG +Y + +HN GFM +D + KF A ++ ++ G I ++
Sbjct: 1 MKLIVALGNPGLKYEKTKHNTGFMALDHYLDEKGLRLDRDKFTALYAKEKVAGEDVIFME 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ F+K+ + + LVI DD+D+ LR++ GG GHNG+KSI
Sbjct: 61 PQTYMNESGRAVGAAAKFFKI-DPSDILVIQDDMDMPIAKLRIRAGGKSGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + + RL+IGI R PD ++ VL F+ ++
Sbjct: 120 CLGTEKFNRLKIGI-RHPDKQSVVSWVLTPFNPDQQ 154
>gi|212696151|ref|ZP_03304279.1| hypothetical protein ANHYDRO_00687 [Anaerococcus hydrogenalis DSM
7454]
gi|212676780|gb|EEB36387.1| hypothetical protein ANHYDRO_00687 [Anaerococcus hydrogenalis DSM
7454]
Length = 194
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 89/162 (54%), Gaps = 16/162 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+ + GLGNPG +Y RHN GF+ ID + + K KF + I +G + G + +L+K
Sbjct: 1 MYYIVGLGNPGMQYENTRHNAGFISIDYLARKYNIDVRKIKFKSLIGQGVISGHKVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDL-------DLDFGTLRLKTGGGDAGHN 113
PQT+MN SG+++ E+ N+Y HD L D+DFG++R++ G HN
Sbjct: 61 PQTYMNNSGEAIREIFNYYDFD--------HDKLIVIYDDIDIDFGSIRIRKKGSAGTHN 112
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G+KSI ++ R+++ +G+ P+ + VL FS E
Sbjct: 113 GMKSIIYNLQFDDFPRIKVAVGKKPEYMDLANFVLSGFSKKE 154
>gi|111115621|ref|YP_710239.1| peptidyl-tRNA hydrolase [Borrelia afzelii PKo]
gi|216263488|ref|ZP_03435483.1| peptidyl-tRNA hydrolase [Borrelia afzelii ACA-1]
gi|119390915|sp|Q0SM65|PTH_BORAP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110890895|gb|ABH02063.1| peptidyl-tRNA hydrolase [Borrelia afzelii PKo]
gi|215980332|gb|EEC21153.1| peptidyl-tRNA hydrolase [Borrelia afzelii ACA-1]
Length = 188
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ RHN+GF +D+I S + F KKK+ E SE ++ R IL+K
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIVSKNGLFLKRKKKY--EYSELRVISRRVILVK 60
Query: 61 PQTFMNLSGQSLLEVM-NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSG + +FY ++N LV+ D++DL G RLK GG + HNGLKSIS
Sbjct: 61 PLTYMNLSGSLFPSIFSDFYMC--IKNLLVVLDNVDLPLGKCRLKERGGMSTHNGLKSIS 118
Query: 120 EKCG-KNYKRLRIGIG 134
G NY RL IG+G
Sbjct: 119 SVLGSSNYSRLYIGVG 134
>gi|328952986|ref|YP_004370320.1| Peptidyl-tRNA hydrolase [Desulfobacca acetoxidans DSM 11109]
gi|328453310|gb|AEB09139.1| Peptidyl-tRNA hydrolase [Desulfobacca acetoxidans DSM 11109]
Length = 199
Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 89/175 (50%), Gaps = 2/175 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y RHN+GF ID + + A+ G G +L +
Sbjct: 1 MQLFIGLGNPGFRYKRTRHNVGFQIIDVLSQRWGISLNRHTCSAQWGRGGWAGQEVVLAQ 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MNLSG+++ ++ F++L + + L+IHDDLDL G L+ GG GH G+ SI
Sbjct: 61 PETYMNLSGRAVFRLLAFFQL-SAADLLIIHDDLDLPLGRLKFVLRGGAGGHRGVASIIN 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ RL++GIGRP + +VL E +ID A +L + K
Sbjct: 120 TIHTTEFLRLKVGIGRPQYGETVENYVLSPCYPAEIDTYASMIDRTADALEAVLK 174
>gi|153952804|ref|YP_001393569.1| peptidyl-tRNA hydrolase [Clostridium kluyveri DSM 555]
gi|219853469|ref|YP_002470591.1| hypothetical protein CKR_0126 [Clostridium kluyveri NBRC 12016]
gi|189038284|sp|A5N4J0|PTH_CLOK5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783863|sp|B9DY52|PTH_CLOK1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146345685|gb|EDK32221.1| Pth [Clostridium kluyveri DSM 555]
gi|219567193|dbj|BAH05177.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 187
Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 103/173 (59%), Gaps = 4/173 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGN G +Y RHNIGF ID + + ++KF EG + + IL+K
Sbjct: 1 MFLIVGLGNIGVKYHRTRHNIGFDFIDLVSKKYNITLNREKFKGNYGEGFIGQNKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ E +NFYK+ N + ++I+DD+D+D G R++ G GHNG+K+I
Sbjct: 61 PGTYMNLSGESVREAVNFYKIEN-DRMIIIYDDIDIDIGRFRIRHRGSAGGHNGIKNIIL 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + + R++IGIG P ++ +VLG FS +R + ++ +L +
Sbjct: 120 NLGTDVFPRIKIGIGHP--NVDLVSYVLGKFSEDDRINIEKVLKTSVEALECI 170
>gi|116783352|gb|ABK22906.1| unknown [Picea sitchensis]
Length = 246
Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 91/156 (58%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF ID I + + I +G + +L KP
Sbjct: 52 WLLIGLGNPGKKYEGTRHNVGFEMIDSIAKAEGISLNAIQSKSLIGKGYICNTPVLLAKP 111
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QT++NL+G+S+ + +Y++P ++ L++ D ++L G LR++ GG HNG+KS+
Sbjct: 112 QTYINLTGESVGSLAVYYRIP-FQHILLMFDMMELPSGILRIQAKGGHGLHNGVKSVINH 170
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K +N+ RL IGIG PP + +VL FS+ ER
Sbjct: 171 LKGNRNFPRLCIGIGNPPGSMDSKAYVLQQFSTMER 206
>gi|306835679|ref|ZP_07468685.1| aminoacyl-tRNA hydrolase [Corynebacterium accolens ATCC 49726]
gi|304568397|gb|EFM43956.1| aminoacyl-tRNA hydrolase [Corynebacterium accolens ATCC 49726]
Length = 215
Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 88/155 (56%), Gaps = 7/155 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH---FFPAWKKKFHAEISEGQLDGLRTIL 58
+++ GLGNPG +Y RHN+G+M +D + + P + E++ + R +
Sbjct: 31 WLIIGLGNPGAKYAATRHNVGYMAVDDVLAQGGDVLEPV--RGMDLEVAPLRWGDTRVLA 88
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++ TFMNLSG + + + ++ +VIHD+LDL +RLK GG + GHNGLKS+
Sbjct: 89 VRTTTFMNLSGDPIAPLARALGI-AADHIIVIHDELDLPANKIRLKQGGNENGHNGLKSL 147
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSS 152
+ G ++Y R+RIGI RPP + I +VL +
Sbjct: 148 THNLGTRDYVRVRIGIARPPKGSSIPDYVLAPVDA 182
>gi|319891455|ref|YP_004148330.1| Peptidyl-tRNA hydrolase [Staphylococcus pseudintermedius HKU10-03]
gi|317161151|gb|ADV04694.1| Peptidyl-tRNA hydrolase [Staphylococcus pseudintermedius HKU10-03]
gi|323465375|gb|ADX77528.1| peptidyl-tRNA hydrolase [Staphylococcus pseudintermedius ED99]
Length = 190
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 98/177 (55%), Gaps = 2/177 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G +Y RHNIGF ID + H K+KF + +++G + +LI+
Sbjct: 1 MKCIVGLGNIGKKYEYTRHNIGFEVIDHLLDRHQIKLDKQKFRGAYTIERINGEKVMLIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + + ++ D G +RL+ G GHNG+KSI +
Sbjct: 61 PLTLMNLSGEAVAPLMDYYDVEVDDLLVLYDDLDLAQ-GHVRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G ++KR+RIGI RP + + +VL FS+ E + +I ++A ++ E
Sbjct: 120 MLGTSDFKRIRIGIDRPSNGMAVKDYVLQRFSTNEMKVMDTVIQHVADAVEAFIGNE 176
>gi|73968190|ref|XP_537833.2| PREDICTED: hypothetical protein XP_537833 [Canis familiaris]
Length = 222
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKK--KFHAEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ W + + A+++ LD + +L
Sbjct: 31 WLVAGLGNPG--LPSTRHSVGLAVLGQLARRLGVADGWARDRRCAADLALASLDDAQLVL 88
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS- 117
++P+ MN +G+S+ + L E YLV HD+LD G L LK GG GHNG++S
Sbjct: 89 LRPRRLMNANGRSVARAAELFGLTAEEVYLV-HDELDKPLGKLALKLGGSSRGHNGVRSC 147
Query: 118 ISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
IS RLR+GIGRP + + +VLG FS+ E+ L P+++
Sbjct: 148 ISCLNSSAMPRLRVGIGRPTEPDTVKAYVLGCFSAAEQELLPPLLE 193
>gi|255083292|ref|XP_002504632.1| peptidyl-tRNA hydrolase, potentially chloroplast precursor
[Micromonas sp. RCC299]
gi|226519900|gb|ACO65890.1| peptidyl-tRNA hydrolase, potentially chloroplast precursor
[Micromonas sp. RCC299]
Length = 287
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 95/162 (58%), Gaps = 8/162 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTIL 58
+++ GLGNPG + RHN GF +D R + A + A++ G++ G+ +L
Sbjct: 37 WLLVGLGNPGSRFEGTRHNAGFDVLDILARTEGISWTDA--ARHRAKVGVGKIAGVPVLL 94
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS- 117
KPQT+MNLSG+S+ + +YK+PN N LV++DDLD G ++LK GG GHNG+++
Sbjct: 95 AKPQTYMNLSGESVRSLCRWYKIPN-SNLLVVYDDLDTAVGAIKLKGKGGHGGHNGIRNI 153
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
I E CG K + R++ GIGRP + HVL F E L
Sbjct: 154 IDEVCGDKVFARVKFGIGRPKPGVEVYDHVLTKFGDDEATEL 195
>gi|15237280|ref|NP_197118.1| peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana]
gi|145334495|ref|NP_001078593.1| peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana]
gi|75311128|sp|Q9LF14|CRS2B_ARATH RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic; AltName: Full=CRS2-like protein
B; AltName: Full=Chloroplastic RNA splicing factor 2-B;
Flags: Precursor
gi|9755824|emb|CAC01855.1| CRS2-like protein [Arabidopsis thaliana]
gi|38016015|gb|AAR07514.1| At5g16140 [Arabidopsis thaliana]
gi|51968726|dbj|BAD43055.1| CRS2-like protein [Arabidopsis thaliana]
gi|332004868|gb|AED92251.1| chloroplastic group IIB intron splicing facilitator CRS2-B
[Arabidopsis thaliana]
gi|332004869|gb|AED92252.1| chloroplastic group IIB intron splicing facilitator CRS2-B
[Arabidopsis thaliana]
Length = 240
Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG++Y RHN+GF ID + + A I G ++ + +L KP
Sbjct: 46 WLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKP 105
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+S+ + + Y++P L + L+I+D++ L G LRL+ GG HNG+KS+
Sbjct: 106 QTYMNFSGESVGSLASHYRVP-LRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGH 164
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+N+ RL IGIG+PP + +L FS E+
Sbjct: 165 LDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQ 200
>gi|119897044|ref|YP_932257.1| peptidyl-tRNA hydrolase [Azoarcus sp. BH72]
gi|166199304|sp|A1K3G5|PTH_AZOSB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119669457|emb|CAL93370.1| Pth protein [Azoarcus sp. BH72]
Length = 218
Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 99/174 (56%), Gaps = 5/174 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG EY E RHN GF +R+ + + + +FH ++ + G+ L+ P
Sbjct: 8 LVVGLGNPGAEYSETRHNAGFWFCERLADTLGVRFSHESRFHGLVANAREAGV--WLLMP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SGQ++ + FY++ E LV+HD+LD+ G LRLK GGG GHNGLK S
Sbjct: 66 QTYMNRSGQAIGALARFYRIAPAE-ILVVHDELDIPPGQLRLKFGGGLGGHNGLKDTSAH 124
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N Y RLR+GIG P D ++ VL E+ + +D + P LAK
Sbjct: 125 LGTNDYWRLRVGIGHPGDRNEVVNFVLKPARREEQTLIDESLDRALAAWPTLAK 178
>gi|298207390|ref|YP_003715569.1| peptidyl-tRNA hydrolase [Croceibacter atlanticus HTCC2559]
gi|83850026|gb|EAP87894.1| peptidyl-tRNA hydrolase [Croceibacter atlanticus HTCC2559]
Length = 219
Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G +Y RHNIGF +D + K + + + G IL+KP
Sbjct: 35 FLIVGLGNIGPKYHNTRHNIGFKILDHLAEQEDLVFEPNKL-GDTATYKFKGRTFILLKP 93
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ M K+ N L+I DDL+L FGT+RLKT G D GHNGLK I +
Sbjct: 94 STFMNLSGKAVNYWMQKEKI-RTSNLLIITDDLNLPFGTIRLKTKGSDGGHNGLKDIQAQ 152
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
Y R R GI + +VLG +S E
Sbjct: 153 LKTVGYPRFRFGISNEFSKGRQVDYVLGEWSEEEE 187
>gi|119775704|ref|YP_928444.1| peptidyl-tRNA hydrolase [Shewanella amazonensis SB2B]
gi|166229449|sp|A1S8R8|PTH_SHEAM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119768204|gb|ABM00775.1| peptidyl-tRNA hydrolase [Shewanella amazonensis SB2B]
Length = 195
Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 104/191 (54%), Gaps = 8/191 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG EY + RHN G ++ RI + P K+ + L G L+
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVEELARIANVSLAP--DPKYFGLTARAILCGKDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMNLSG+S+ + NF+++ E LV HD+LD++ G R K GGG GHNGLK I
Sbjct: 64 IPSTFMNLSGKSVAALANFFRI-EPEQILVAHDELDMEPGVARFKLGGGHGGHNGLKDII 122
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
K G KN+ RLRIGIG P D + +VLG + E+ + ID RS +L K++
Sbjct: 123 AKMGNNKNFYRLRIGIGHPGDKNKVSGYVLGKAPATEQEKMNAAIDEAVRSTEILFKQDM 182
Query: 178 VSFLNHIVSVR 188
++ + S +
Sbjct: 183 TKAMHRLHSFK 193
>gi|291458170|ref|ZP_06597560.1| aminoacyl-tRNA hydrolase [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291419253|gb|EFE92972.1| aminoacyl-tRNA hydrolase [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 190
Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M+++ GLGNP Y RHN GF +D + H KF + + +L+
Sbjct: 1 MWLICGLGNPERRYIGTRHNAGFAALDLLLHELGDLKLCDTKFQGACVKTRFFEESLLLL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG+ + + NFY++P E +VI D+++L G +R++ G GHNGLKS+
Sbjct: 61 KPLTYMNESGRCIAPLSNFYRIPP-ERIIVISDEIELPPGQIRVRARGSAGGHNGLKSVV 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G +N+ R+RIG+G P+ + +VLG E
Sbjct: 120 SCLGTENFPRVRIGVGEKPEYMDLADYVLGKIPPDE 155
>gi|306843117|ref|ZP_07475739.1| peptidyl-tRNA hydrolase [Brucella sp. BO2]
gi|306286722|gb|EFM58275.1| peptidyl-tRNA hydrolase [Brucella sp. BO2]
Length = 195
Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 91/134 (67%), Gaps = 6/134 (4%)
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L+KPQTFMNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+K
Sbjct: 2 LLVKPQTFMNLSGQSIGEAMRFYKL-TPADLVVIYDELDLVPGKLRIKTGGGSGGHNGIK 60
Query: 117 SI-----SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
SI S G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++
Sbjct: 61 SIDAHMQSFPGGQNYRRMRLGIGHPGARELVHNYVLGDFAKADNEWLDTLLGAVADNVAT 120
Query: 172 LAKREDVSFLNHIV 185
LA+RED SF+N I
Sbjct: 121 LARREDNSFMNRIA 134
>gi|113460649|ref|YP_718715.1| peptidyl-tRNA hydrolase [Haemophilus somnus 129PT]
gi|119390947|sp|Q0I248|PTH_HAES1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|112822692|gb|ABI24781.1| peptidyl-tRNA hydrolase [Haemophilus somnus 129PT]
Length = 194
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 99/175 (56%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+F + + KF + + + G + P
Sbjct: 6 LIVGLGNPGDKYADTRHNAGEWLIERLARRFNFNLSVESKFSGKTARAVISGQEMRFLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++P E LV+HD+LD G ++K GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVSALANFYRIPP-EQILVLHDELDFSPGIAKIKQGGGHGGHNGLKDIIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
KN+ RLRIGIG P D + +VL S +R + ++ + +L K
Sbjct: 125 LANNKNFYRLRIGIGHPGDKNLVASYVLNKPSPTDRQLIDRSLEEATDCIEILMK 179
>gi|261840173|gb|ACX99938.1| peptidyl-tRNA hydrolase [Helicobacter pylori 52]
Length = 186
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSSKHNACLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK L L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYKTKEL---LIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISKGMG---VIEHVLSKFHKNEELLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|226226623|ref|YP_002760729.1| peptidyl-tRNA hydrolase [Gemmatimonas aurantiaca T-27]
gi|259535191|sp|C1A7P9|PTH_GEMAT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226089814|dbj|BAH38259.1| peptidyl-tRNA hydrolase [Gemmatimonas aurantiaca T-27]
Length = 190
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN+G+ ID + F W+K A + G + + L+K
Sbjct: 1 MKVIVGLGNPGREYENTRHNVGWWLIDTLKERWHFEPWRKDGDAVSTTGLVGTKKVKLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG L + ++ +V+ D++ + G RL+ G GHNGLKSI
Sbjct: 61 PQTYMNLSGSVLRPYLKREGWTAAQDLMVLVDEVAVPVGEYRLRAAGSPGGHNGLKSIEA 120
Query: 121 KC-GKNYKRLRIGIGRPPD 138
Y RLR+GI +P D
Sbjct: 121 HLKSPTYPRLRVGI-KPVD 138
>gi|298368592|ref|ZP_06979910.1| aminoacyl-tRNA hydrolase [Neisseria sp. oral taxon 014 str. F0314]
gi|298282595|gb|EFI24082.1| aminoacyl-tRNA hydrolase [Neisseria sp. oral taxon 014 str. F0314]
Length = 191
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 102/170 (60%), Gaps = 8/170 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILIK 60
++AGLGNPG EY + RHN GF +D + ++ + ++K KKF E++ L L+K
Sbjct: 6 LIAGLGNPGREYEQTRHNAGFWFLDEL-AWQWKASFKDEKKFFGEVARVGLPDGDVWLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 65 PMTFMNRSGQAVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 123
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ G +Y RLR+GI P D ++ +VL S+ R I D I +SL
Sbjct: 124 RLGTPDYYRLRLGIDHPGDRNLVVGYVLNKPSAEHRR---QIDDAIRKSL 170
>gi|292488082|ref|YP_003530959.1| peptidyl-tRNA hydrolase [Erwinia amylovora CFBP1430]
gi|292899293|ref|YP_003538662.1| peptidyl-tRNA hydrolase [Erwinia amylovora ATCC 49946]
gi|291199141|emb|CBJ46255.1| peptidyl-tRNA hydrolase [Erwinia amylovora ATCC 49946]
gi|291553506|emb|CBA20551.1| Peptidyl-tRNA hydrolase [Erwinia amylovora CFBP1430]
gi|312172213|emb|CBX80470.1| Peptidyl-tRNA hydrolase [Erwinia amylovora ATCC BAA-2158]
Length = 195
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 101/191 (52%), Gaps = 8/191 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG EY RHN G +D + H+ P + KF + + G L+
Sbjct: 6 LIVGLANPGAEYAATRHNAGAWYVDLLAERHNRSLKP--ESKFFGYTARLNIGGEDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMNLSG+++ + FY++P + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 VPTTFMNLSGKAVAAMATFYRIP-ADEILVAHDELDLPPGVAKFKQGGGHGGHNGLKDII 122
Query: 120 EKCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
K G N+ RLRIGIG P D ++ VLG + E+ + +D AR + K +
Sbjct: 123 SKLGNNVNFHRLRIGIGHPGDRNQVVGFVLGKPQAAEKALIDNAVDEAARCTEVWLKEDR 182
Query: 178 VSFLNHIVSVR 188
+ +N + S +
Sbjct: 183 LKAMNRLHSYK 193
>gi|242239284|ref|YP_002987465.1| peptidyl-tRNA hydrolase [Dickeya dadantii Ech703]
gi|242131341|gb|ACS85643.1| peptidyl-tRNA hydrolase [Dickeya dadantii Ech703]
Length = 195
Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 102/185 (55%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D++ + P + KF + Q+ G L+ P
Sbjct: 6 LIVGLANPGAEYAATRHNAGAWYVDQLAEAYRQPLKEESKFFGYTARLQMAGQDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E LV HD+LDL G +LK GGG GHNGLK I K
Sbjct: 66 TTFMNLSGKAVAAMATFYRI-QPEEILVAHDELDLLPGVAKLKLGGGHGGHNGLKDIISK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P D ++ VLG S+PE+ + ID R +L K + +
Sbjct: 125 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPSAPEQTLIDQAIDEAVRCTEVLMKEDMIR 184
Query: 180 FLNHI 184
+N +
Sbjct: 185 AMNRL 189
>gi|227873323|ref|ZP_03991585.1| aminoacyl-tRNA hydrolase [Oribacterium sinus F0268]
gi|227840838|gb|EEJ51206.1| aminoacyl-tRNA hydrolase [Oribacterium sinus F0268]
Length = 197
Score = 100 bits (249), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 94/170 (55%), Gaps = 3/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M+++AGLGNP +Y RHN GF ID + KF ++ ++ +L+
Sbjct: 1 MWLIAGLGNPEKKYVGTRHNAGFAVIDVLCKELGNLSLESTKFRGAYTKTRIGSEEVLLL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-I 118
KP T+MNLSG+S++ + ++K+P E+ LV+ D++ G +R++ G GHNGLK+ I
Sbjct: 61 KPLTYMNLSGESIVPLAQYFKIPK-EHILVLSDEISFAPGDIRIRKKGSAGGHNGLKNII 119
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
+ + + R+R+G+G + + HVL FS E+ + + A++
Sbjct: 120 AHLHSEEFPRIRLGVGAKGEKEDLAHHVLSPFSKAEQAEMEDAYERAAKA 169
>gi|261364610|ref|ZP_05977493.1| aminoacyl-tRNA hydrolase [Neisseria mucosa ATCC 25996]
gi|288567199|gb|EFC88759.1| aminoacyl-tRNA hydrolase [Neisseria mucosa ATCC 25996]
Length = 192
Score = 100 bits (249), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 105/185 (56%), Gaps = 8/185 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF ID + ++ + K KKF ++ + G L+K
Sbjct: 7 MIVGLGNPGSEYEQTRHNAGFWFIDEL-AWQYKATLKEEKKFFGSVARISISGSDLWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PATFMNRSGQAVATLAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK---RE 176
+ G ++ RLR+GI P D ++ +VL S R + I+ +++P+L E
Sbjct: 125 RLGTPDFYRLRLGIDHPGDRNLVVGYVLNKPSPEHRQQIDEAINKSLKAVPMLLAGEWEE 184
Query: 177 DVSFL 181
V FL
Sbjct: 185 AVRFL 189
>gi|300858116|ref|YP_003783099.1| peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis FRC41]
gi|300685570|gb|ADK28492.1| Peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis FRC41]
gi|302205837|gb|ADL10179.1| Peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis C231]
gi|302330395|gb|ADL20589.1| Peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis 1002]
gi|308276072|gb|ADO25971.1| Peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis I19]
Length = 217
Score = 100 bits (249), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 92/155 (59%), Gaps = 5/155 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
+IV GLGNP ++Y NRHN+G+M +D + P +++ + +++ +++
Sbjct: 35 WIVIGLGNPDNKYARNRHNVGYMAVDAL--LGDVPLIQRRGLPVREARLRINQHEVAVLR 92
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
T+MN SG+++ + Y + ++ +++HD+LDL GT+R+K GG + GHNGLKS S
Sbjct: 93 STTYMNNSGEAIAPIAEEYGIA-ADHIIILHDELDLPHGTVRIKKGGNENGHNGLKSSSA 151
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
++Y R+R+GI RPP + +VLG+ E
Sbjct: 152 LLNTRDYLRIRMGISRPPQGMSVPDYVLGDIEHDE 186
>gi|325971762|ref|YP_004247953.1| peptidyl-tRNA hydrolase [Spirochaeta sp. Buddy]
gi|324027000|gb|ADY13759.1| Peptidyl-tRNA hydrolase [Spirochaeta sp. Buddy]
Length = 184
Score = 100 bits (249), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 88/150 (58%), Gaps = 7/150 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +RHN+GF +D +F F KK+ + ++ G +L++
Sbjct: 1 MRLILGLGNPGAKYEHSRHNVGFDVVDTCAAF-FQVTLKKRCFRLYRQAKV-GDNVLLVQ 58
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ + + + +VI D LDL G +R++ GG AGHNGLKS+ E
Sbjct: 59 PLTFMNASG----AILKHFPQTSASDMIVICDQLDLPPGMIRIRNGGSSAGHNGLKSLIE 114
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGN 149
G ++ R+ IGIGRP + ++ HVLG
Sbjct: 115 CYGNGDFIRIYIGIGRPKEGVSVVDHVLGQ 144
>gi|91792179|ref|YP_561830.1| peptidyl-tRNA hydrolase [Shewanella denitrificans OS217]
gi|119391002|sp|Q12R19|PTH_SHEDO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|91714181|gb|ABE54107.1| peptidyl-tRNA hydrolase [Shewanella denitrificans OS217]
Length = 195
Score = 100 bits (249), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 106/192 (55%), Gaps = 10/192 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCI---DRIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG EY + RHN G + R+ + P + K++ + L G L+
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVHELARVCNVTLVP--ESKYYGLAARATLHGRDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
P TFMNLSG+S+ + NF++ LP E LV HD+LD++ G + K GGG GHNGLK I
Sbjct: 64 IPATFMNLSGKSVAALANFFRILP--EEILVAHDELDIEPGVAKFKLGGGHGGHNGLKDI 121
Query: 119 SEKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
+ G K + RLRIGIG P D + +VLG + E+ + ID R+ +L K++
Sbjct: 122 IAQMGNDKGFHRLRIGIGHPGDKNKVSGYVLGKAPASEQEKMDAAIDEAVRATEILFKQD 181
Query: 177 DVSFLNHIVSVR 188
V +N + S +
Sbjct: 182 MVKAMNRLHSFK 193
>gi|217033871|ref|ZP_03439295.1| hypothetical protein HP9810_870g3 [Helicobacter pylori 98-10]
gi|216943634|gb|EEC23079.1| hypothetical protein HP9810_870g3 [Helicobacter pylori 98-10]
Length = 186
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D I + K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLISELDLSFTFSSKHNACLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK L L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYKTKEL---LIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + ++ HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISKGMG---VVEHVLSKFHKNEESLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|255645504|gb|ACU23247.1| unknown [Glycine max]
Length = 244
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 5/157 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG++Y RHN+GF ID + + A I G + + +L KP
Sbjct: 50 WLIIGLGNPGNKYHGTRHNVGFEIIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLAKP 109
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS-- 119
QT+MN SG+S+ + +Y++P L + L++ D+ L G LRL+ GG HNGLK++
Sbjct: 110 QTYMNFSGESVGPLAAYYQVP-LRHILLVFDETSLPNGVLRLQPKGGHGHHNGLKNVMGH 168
Query: 120 -EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ C + RL +GIG PP T + ++L FS ER
Sbjct: 169 LDGCSA-FPRLAVGIGNPPGTMDLRAYLLQKFSVEER 204
>gi|297380648|gb|ADI35535.1| peptidyl-tRNA hydrolase [Helicobacter pylori v225d]
Length = 184
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLR 55
M ++ GLGNP Y RHN GF +D + SF F P K +A + +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSP----KHNACLCVYK----D 52
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
I +KPQT+MNLSG+S+L NFYK L L++HDDLDLD G +R K GGG+ GHNGL
Sbjct: 53 FIFLKPQTYMNLSGESVLSAKNFYKTKEL---LIVHDDLDLDLGVVRFKNGGGNGGHNGL 109
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KSI C +Y RLR+GI + ++ HVL F E + ++ +L +
Sbjct: 110 KSIDLLCSNSYYRLRVGISKG---MGVVEHVLSKFHKNEEPLKTAVFEHAKNALKFFIES 166
Query: 176 EDVSFLNHIVSVRK 189
D + + + +++K
Sbjct: 167 HDFNAMQNRFTLKK 180
>gi|225551687|ref|ZP_03772631.1| peptidyl-tRNA hydrolase [Borrelia sp. SV1]
gi|225371714|gb|EEH01140.1| peptidyl-tRNA hydrolase [Borrelia sp. SV1]
gi|312147913|gb|ADQ30572.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi JD1]
Length = 188
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 89/156 (57%), Gaps = 8/156 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ RHN+GF +D+I S + F KKK+ E SE ++ R IL+K
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIVSKNGLFLKRKKKY--EYSELKMISGRVILVK 60
Query: 61 PQTFMNLSGQSLLEVM-NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSG + +FY ++N LV+ D++DL G RLK GG + HNGL+SIS
Sbjct: 61 PLTYMNLSGSLFPSIFSDFYMC--IKNLLVVLDNVDLPLGKCRLKERGGVSTHNGLRSIS 118
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G NY RL IG+G I VL F E
Sbjct: 119 SVLGSSNYSRLYIGVGSNL-MCDIKSFVLSRFCKDE 153
>gi|222152153|ref|YP_002561313.1| peptidyl-tRNA hydrolase [Macrococcus caseolyticus JCSC5402]
gi|254783875|sp|B9E8U9|PTH_MACCJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|222121282|dbj|BAH18617.1| peptidyl-tRNA hydrolase [Macrococcus caseolyticus JCSC5402]
Length = 189
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 103/170 (60%), Gaps = 2/170 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G +Y RHNIGFM +DR+ + ++KF + ++G + +LI+
Sbjct: 1 MKCIVGLGNIGKKYELTRHNIGFMVVDRLVESYNLELNQQKFKGLYAIAMINGEKVLLIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M+++ + E+ LV++DDLD+ G LRL+ G GHNG++S+ +
Sbjct: 61 PMTYMNSSGEAVRPLMDYFNVST-EDLLVLYDDLDMPPGRLRLRQKGSAGGHNGIRSLIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + +KR+RIGIGRP ++ VL F+ E + +I+ +++
Sbjct: 120 HLGTDQFKRIRIGIGRPTGHLKVVDFVLQKFTPDEMIVMDKVINQTIKAV 169
>gi|224532914|ref|ZP_03673525.1| aminoacyl-tRNA hydrolase [Borrelia burgdorferi WI91-23]
gi|226321218|ref|ZP_03796752.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 29805]
gi|224512152|gb|EEF82542.1| aminoacyl-tRNA hydrolase [Borrelia burgdorferi WI91-23]
gi|226233372|gb|EEH32119.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 29805]
gi|312149257|gb|ADQ29328.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi N40]
Length = 188
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ RHN+GF +D+I S + F KKK+ E SE ++ R IL+K
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIVSKNGLFLKRKKKY--EYSELKMISGRVILVK 60
Query: 61 PQTFMNLSGQSLLEVM-NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSG + +FY ++N LV+ D++DL G RLK GG + HNGL+SIS
Sbjct: 61 PLTYMNLSGSLFPSIFSDFYMC--IKNLLVVLDNVDLPLGKCRLKERGGVSTHNGLRSIS 118
Query: 120 EKCG-KNYKRLRIGIG 134
G NY RL IG+G
Sbjct: 119 SVLGSSNYSRLYIGVG 134
>gi|90416945|ref|ZP_01224874.1| peptidyl-tRNA hydrolase [marine gamma proteobacterium HTCC2207]
gi|90331292|gb|EAS46536.1| peptidyl-tRNA hydrolase [marine gamma proteobacterium HTCC2207]
Length = 195
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 96/172 (55%), Gaps = 4/172 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGF-MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN G + ++ S + KF + ++ +D L+ P
Sbjct: 7 LIVGLGNPGPNYDRTRHNAGADLVLELAKSCSGTLKHESKFFGDTAKITIDNRDVRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS+ + FY++P +E LV+HD+LD+ G R K GGG GHNGL+ I +
Sbjct: 67 TTFMNRSGQSVAALARFYQVP-VEAILVVHDELDISPGAARFKKGGGHGGHNGLRDIVQS 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
KN+ RLRIGIG P D + +VL S ++ + ID+ R+LPL
Sbjct: 126 LANNKNFARLRIGIGHPGDARQVADYVLKKASPSDQQLISNSIDDALRTLPL 177
>gi|303288600|ref|XP_003063588.1| peptidyl-tRNA hydrolase [Micromonas pusilla CCMP1545]
gi|226454656|gb|EEH51961.1| peptidyl-tRNA hydrolase [Micromonas pusilla CCMP1545]
Length = 257
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 101/163 (61%), Gaps = 9/163 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH---FFPAWKKKFHAEISEGQLDGLRTIL 58
++V GLGNPG ++ RHN GF + + S H F A K + + I+ G++ + +L
Sbjct: 41 WLVVGLGNPGSKFTRTRHNAGFDAVSLLASAHGMSFTGALKHR--SMIATGKIANVPVVL 98
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
PQTFMNLSG+++ +V+ +YK+ + + LV++DD+D G ++LK GG GHNG+++I
Sbjct: 99 AMPQTFMNLSGEAIRDVLRWYKI-SPKRMLVLYDDMDSPVGVVKLKGKGGHGGHNGVRNI 157
Query: 119 SEKCG---KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
++ K + R++IGIGRP +I HVL F++ ER L
Sbjct: 158 IDEVTRGEKTFARVKIGIGRPAAGVSVIDHVLRRFTAEEREAL 200
>gi|270283891|ref|ZP_05965161.2| aminoacyl-tRNA hydrolase [Bifidobacterium gallicum DSM 20093]
gi|270277643|gb|EFA23497.1| aminoacyl-tRNA hydrolase [Bifidobacterium gallicum DSM 20093]
Length = 205
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 100/169 (59%), Gaps = 22/169 (13%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFH-----AEISEGQLD---- 52
+++ GLGN G Y RHN+GFM + + + W+ KF AE+ +G ++
Sbjct: 12 WLIVGLGNKGVRYEGTRHNMGFMVANELAA-----RWQVKFSNFKGLAELGQGTMNLQGQ 66
Query: 53 GLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGH 112
+ +L KP T+MN SGQ++ + +Y + ++ +VIHDD+DL+FG ++LK+GG GH
Sbjct: 67 THKFLLAKPLTYMNNSGQAVESIAKYYHVKP-DHIIVIHDDMDLEFGRIKLKSGGSAGGH 125
Query: 113 NGLKSISEKC--GKNYKRLRIGIG---RPPDT-AHIIRHVLGNFSSPER 155
NG+KSI + C +Y R+R+G G R D ++ I VLG F++ +R
Sbjct: 126 NGIKSI-DACLHTPDYARVRMGTGHSSRAGDAHSNSIDFVLGKFNAAQR 173
>gi|218781213|ref|YP_002432531.1| Aminoacyl-tRNA hydrolase [Desulfatibacillum alkenivorans AK-01]
gi|218762597|gb|ACL05063.1| Aminoacyl-tRNA hydrolase [Desulfatibacillum alkenivorans AK-01]
Length = 224
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 94/162 (58%), Gaps = 11/162 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAE----ISEGQLDGLRTI 57
++VAGLGNPG +Y + RHNIGFM D + W+ F G +
Sbjct: 36 WLVAGLGNPGEKYSQTRHNIGFMAADLLGE-----KWRLGFETHGASLFGAGLIGETPAG 90
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
+IKPQ++MNLSG + E+ + + + E LVIHDDLDL FG +++K GG GH G++S
Sbjct: 91 VIKPQSYMNLSGPPIWEIAGKFGI-DRERVLVIHDDLDLPFGKIKIKKKGGHGGHKGIQS 149
Query: 118 ISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+ + G ++ RLR+GIGRPP ++ HVLG F + E L
Sbjct: 150 LIQSFGDGDFPRLRVGIGRPPAGQSVVDHVLGRFDAEENLVL 191
>gi|15595132|ref|NP_212921.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi B31]
gi|195942002|ref|ZP_03087384.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 80a]
gi|218249419|ref|YP_002375286.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi ZS7]
gi|221217611|ref|ZP_03589080.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 72a]
gi|223889314|ref|ZP_03623901.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 64b]
gi|224533459|ref|ZP_03674052.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi CA-11.2a]
gi|225549395|ref|ZP_03770367.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 94a]
gi|1346894|sp|P47714|PTH_BORBU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226723246|sp|B7J0N3|PTH_BORBZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|476008|gb|AAC41525.1| Peptidyl-tRNA hydrolase-like protein [Borrelia burgdorferi]
gi|2688714|gb|AAC67122.1| peptidyl-tRNA hydrolase (pth) [Borrelia burgdorferi B31]
gi|218164607|gb|ACK74668.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi ZS7]
gi|221192557|gb|EEE18775.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 72a]
gi|223885235|gb|EEF56338.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 64b]
gi|224513421|gb|EEF83779.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi CA-11.2a]
gi|225370023|gb|EEG99464.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 94a]
Length = 188
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ RHN+GF +D+I S + F KKK+ E SE ++ R IL+K
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIVSKNGLFLKRKKKY--EYSELKMISGRVILVK 60
Query: 61 PQTFMNLSGQSLLEVM-NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSG + +FY ++N LV+ D++DL G RLK GG + HNGL+SIS
Sbjct: 61 PLTYMNLSGSLFPSIFSDFYMC--IKNLLVVLDNVDLPLGKCRLKERGGVSTHNGLRSIS 118
Query: 120 EKCG-KNYKRLRIGIG 134
G NY RL IG+G
Sbjct: 119 SVLGSSNYSRLYIGVG 134
>gi|320536628|ref|ZP_08036647.1| peptidyl-tRNA hydrolase [Treponema phagedenis F0421]
gi|320146532|gb|EFW38129.1| peptidyl-tRNA hydrolase [Treponema phagedenis F0421]
Length = 203
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 104/195 (53%), Gaps = 22/195 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD---GLRTILI 59
++A LGN G EY RHN ++ ++I + +W+ KF ++ G L+
Sbjct: 4 LIAFLGNHGREYARTRHNAAWIISEKI-AVSKNVSWQHKFSGNYAQAPFSCTGGEVVHLL 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+T+MNLSG S+ +++FYKL E LV+HD+L+L + K GG GHNGL+SI
Sbjct: 63 KPETYMNLSGVSVKALVSFYKL-KPEEILVVHDELELAPAAISFKWAGGLGGHNGLRSIK 121
Query: 120 EKCG-KNYKRLRIGIGRPPDTAH-------IIRHVLGNFSSPERYFLLPIIDNIARSL-- 169
+ G ++ RLRIGIGRP +A I +VL FS E L I+ I SL
Sbjct: 122 AQLGTADFWRLRIGIGRPDFSAQGGNAHPDIAGYVLSLFSQHE----LEDIEKIIPSLDE 177
Query: 170 ---PLLAKREDVSFL 181
LL E++S L
Sbjct: 178 LFAALLPPTENLSAL 192
>gi|226321252|ref|ZP_03796780.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi Bol26]
gi|226233284|gb|EEH32035.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi Bol26]
Length = 188
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ RHN+GF +D+I S + F KKK+ E SE ++ R IL+K
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIVSKNGLFLKRKKKY--EYSELKMISGRVILVK 60
Query: 61 PQTFMNLSGQSL-LEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSG L +FY ++N LV+ D++DL G RLK GG + HNGL+SIS
Sbjct: 61 PLTYMNLSGSLFPLIFSDFYMC--IKNLLVVLDNVDLPLGKCRLKERGGVSTHNGLRSIS 118
Query: 120 EKCG-KNYKRLRIGIG 134
G NY RL IG+G
Sbjct: 119 SVLGSSNYSRLYIGVG 134
>gi|293115400|ref|ZP_05791311.2| aminoacyl-tRNA hydrolase [Butyrivibrio crossotus DSM 2876]
gi|292810128|gb|EFF69333.1| aminoacyl-tRNA hydrolase [Butyrivibrio crossotus DSM 2876]
Length = 198
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 97/173 (56%), Gaps = 2/173 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNP +Y RHN+GF ID + ++K I +G + G + IL+K
Sbjct: 12 MYVIAGLGNPEKKYEMTRHNMGFRIIDALAGRFNISMTEQKHKGLIGKGIIGGNKVILVK 71
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + V ++YK+ E +V DD+ L+ G +R++ G GHNG+KSI
Sbjct: 72 PLTYMNLSGECIRPVCDYYKVDPSE-CIVAFDDISLEPGKIRIRKKGSAGGHNGIKSIIS 130
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + + RL+ G+G P + +VLG F+S + + ++ ++ +
Sbjct: 131 CLGTDAFPRLKFGVGDKPKQMDLADYVLGRFNSEDEAIVAKELEKACNAIECM 183
>gi|157370226|ref|YP_001478215.1| peptidyl-tRNA hydrolase [Serratia proteamaculans 568]
gi|167011997|sp|A8GD97|PTH_SERP5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157321990|gb|ABV41087.1| Aminoacyl-tRNA hydrolase [Serratia proteamaculans 568]
Length = 196
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 97/173 (56%), Gaps = 4/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF+ + L G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLAQRHNQQLKEESKFYGYTARLNLAGNDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++L + NFY++ + LV HD+LD+ G ++K GGG+ GHNGLK I K
Sbjct: 66 TTFMNLSGKAVLAMANFYRI-EPDEILVAHDELDIPPGVAKIKLGGGNGGHNGLKDIQSK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G N+ RLRIGIG P D ++ VLG + E+ + ID AR +L
Sbjct: 125 FGNNPNFYRLRIGIGHPGDKNKVVGFVLGKPPASEQKMIDEAIDEAARCTEIL 177
>gi|238028670|ref|YP_002912901.1| peptidyl-tRNA hydrolase [Burkholderia glumae BGR1]
gi|237877864|gb|ACR30197.1| Peptidyl-tRNA hydrolase [Burkholderia glumae BGR1]
Length = 201
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 87/139 (62%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF C+D++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWCVDQLAREAGATLRDERRFHGHYAKARLYGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ V F+K LP+ LV HD+LDL G ++LK GGG GHNGLK IS
Sbjct: 64 QTYMNRSGQSVVAVAQFFKILPD--EILVAHDELDLPPGAVKLKLGGGSGGHNGLKDISA 121
Query: 121 K-CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 122 HLSSQQYWRLRIGIGHPRD 140
>gi|319441659|ref|ZP_07990815.1| peptidyl-tRNA hydrolase [Corynebacterium variabile DSM 44702]
Length = 187
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 97/155 (62%), Gaps = 5/155 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHNIG +D + HF + KK +A + E ++ + +L KP
Sbjct: 13 LLVVGLGNPGADYEGTRHNIGAAVLDELGD-HF--SVNKKVNAHVDEIRVGDRKVVLAKP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
++FMNLSG + + ++K+ + +VIHD+LDLD GT++LK GGG GHNGLK I++
Sbjct: 70 RSFMNLSGGPVKALAGYFKVKPAQ-VVVIHDELDLDLGTVKLKKGGGLNGHNGLKDIAKS 128
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G +++ R+++GIGRPP VL FS E+
Sbjct: 129 LGTQDFLRIQMGIGRPPGRMAPASFVLKRFSKAEQ 163
>gi|216264799|ref|ZP_03436791.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 156a]
gi|215981272|gb|EEC22079.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 156a]
Length = 185
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 84/135 (62%), Gaps = 7/135 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN+GF +D+I S + F KKK+ E SE ++ R IL+KP
Sbjct: 1 MILGLGNPGLEFSLTRHNVGFSLLDKIVSKNGLFLKRKKKY--EYSELKMISGRVILVKP 58
Query: 62 QTFMNLSGQSLLEVM-NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
T+MNLSG + +FY ++N LV+ D++DL G RLK GG + HNGL+SIS
Sbjct: 59 LTYMNLSGSLFPSIFSDFYMC--IKNLLVVLDNVDLPLGKCRLKERGGVSTHNGLRSISS 116
Query: 121 KCG-KNYKRLRIGIG 134
G NY RL IG+G
Sbjct: 117 VLGSSNYSRLYIGVG 131
>gi|227501517|ref|ZP_03931566.1| peptidyl-tRNA hydrolase [Corynebacterium accolens ATCC 49725]
gi|227077542|gb|EEI15505.1| peptidyl-tRNA hydrolase [Corynebacterium accolens ATCC 49725]
Length = 215
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 88/155 (56%), Gaps = 7/155 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH---FFPAWKKKFHAEISEGQLDGLRTIL 58
+++ GLGNPG +Y RHN+G+M +D + + P + E++ + R +
Sbjct: 31 WLIIGLGNPGAKYAATRHNVGYMAVDDVLAQGGDVLEPV--RGMDLEVAPLRWGDTRVLA 88
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++ TFMNLSG + + + ++ +VIHD+LDL +RLK GG + GHNGLKS+
Sbjct: 89 VRTITFMNLSGDPIAPLARALGV-AADHIIVIHDELDLPANKIRLKQGGNENGHNGLKSL 147
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSS 152
+ G ++Y R+RIGI RPP + I +VL +
Sbjct: 148 THNLGTRDYLRVRIGIARPPKGSSIPNYVLAPVDA 182
>gi|188528268|ref|YP_001910955.1| peptidyl-tRNA hydrolase [Helicobacter pylori Shi470]
gi|226694257|sp|B2UVP3|PTH_HELPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|188144508|gb|ACD48925.1| peptidyl-tRNA hydrolase [Helicobacter pylori Shi470]
Length = 186
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D I + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLISELDLSFTFSSKHNACLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK E L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TEELLIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISKGMG---VIEHVLSKFHKNEEPLKNAAFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|253999719|ref|YP_003051782.1| peptidyl-tRNA hydrolase [Methylovorus sp. SIP3-4]
gi|313201767|ref|YP_004040425.1| peptidyl-tRNA hydrolase [Methylovorus sp. MP688]
gi|253986398|gb|ACT51255.1| peptidyl-tRNA hydrolase [Methylovorus sp. SIP3-4]
gi|312441083|gb|ADQ85189.1| peptidyl-tRNA hydrolase [Methylovorus sp. MP688]
Length = 195
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 98/169 (57%), Gaps = 6/169 (3%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKPQTF 64
GLGNPG EY + RHN GF IDR+ + A + KFH + + G L+KP TF
Sbjct: 9 GLGNPGSEYEDTRHNAGFWWIDRVAALSGSKLANEAKFHGLAGKLKHSGTEAWLLKPTTF 68
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK 124
MN SG+S+ + FYK+ E LVIHD+LD+ G +++K GGG GHNGLK I+ G
Sbjct: 69 MNASGRSVGALAKFYKIEPHE-ILVIHDELDIPPGQVKMKKGGGHGGHNGLKDIAAHLGT 127
Query: 125 N-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
N + RLR+GIG P + A ++ VL +P + + I I S+ LL
Sbjct: 128 NEFWRLRLGIGHPGERAAVVNFVL---HAPAKAEMSLIETTIEDSVALL 173
>gi|325846470|ref|ZP_08169385.1| aminoacyl-tRNA hydrolase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481228|gb|EGC84269.1| aminoacyl-tRNA hydrolase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 194
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 16/162 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+ + GLGNPG +Y RHN GF+ ID + + K KF + I +G + G + +L+K
Sbjct: 1 MYYIVGLGNPGMQYENTRHNAGFISIDYLARKYDIDVRKIKFKSLIGQGVISGHKVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDL-------DLDFGTLRLKTGGGDAGHN 113
PQT+MN SG+++ E+ N++ HD L D+DFG++R++ G HN
Sbjct: 61 PQTYMNNSGEAIREIFNYFDFD--------HDKLIVIYDDIDIDFGSIRIRKKGSAGTHN 112
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G+KSI ++ R+++ +G+ P+ + VL FS E
Sbjct: 113 GMKSIIYNLQFDDFPRIKVAVGKKPEYMDLANFVLSGFSKKE 154
>gi|210135664|ref|YP_002302103.1| peptidyl-tRNA hydrolase [Helicobacter pylori P12]
gi|226694255|sp|B6JNZ5|PTH_HELP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|210133632|gb|ACJ08623.1| peptidyl-tRNA hydrolase [Helicobacter pylori P12]
Length = 186
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 103/190 (54%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSSKHNAYLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK L L++HDDLDL G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYKPKEL---LIVHDDLDLPLGVVRFKKGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + D +I HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISKGID---VIEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|208435365|ref|YP_002267031.1| peptidyl-tRNA hydrolase [Helicobacter pylori G27]
gi|226694256|sp|B5Z9B6|PTH_HELPG RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|208433294|gb|ACI28165.1| peptidyl-tRNA hydrolase [Helicobacter pylori G27]
Length = 186
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + A+ K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELNLSFAFSPKHNAYLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK L L++HDDLDL G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYKTKEL---LIVHDDLDLPLGVVRFKKGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GIGVIEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|308062761|gb|ADO04649.1| peptidyl-tRNA hydrolase [Helicobacter pylori Cuz20]
Length = 186
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLR 55
M ++ GLGNP Y RHN GF +D + SF F P K +A + +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLISELDLSFTFSP----KHNACLCVYK----D 52
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
IL+KPQT+MNLSG+S+L NFYK E L++HDDLDLD G +R K GGG+ GHNGL
Sbjct: 53 FILLKPQTYMNLSGESVLSAKNFYK---TEELLIVHDDLDLDLGVVRFKNGGGNGGHNGL 109
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KSI C +Y RLR+GI + ++ HVL F E ++ +L +
Sbjct: 110 KSIDLLCSNSYYRLRVGISKG---MGVVEHVLSKFHKNEEPLKNAAFEHAKNALKFFIES 166
Query: 176 EDVSFLNHIVSVRK 189
D + + + +++K
Sbjct: 167 HDFNAMQNRFTLKK 180
>gi|255551384|ref|XP_002516738.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
gi|223544111|gb|EEF45636.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
Length = 253
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 11/164 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNI--------GFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG 53
+++ GLGNPG++Y RHN+ GF ID+I + A I G +
Sbjct: 51 WLIVGLGNPGNKYHGTRHNVTNASLDLVGFEMIDKIAKAEAVAMNTIQSKALIGIGCIKE 110
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
+ +L+KPQ +MN SG+S+ + Y++P L + L+I+D++ L G +RL+ GG HN
Sbjct: 111 VPILLVKPQAYMNFSGESVGPLAAHYQVP-LRHILLIYDEMSLPNGVMRLQPKGGHGHHN 169
Query: 114 GLKSISEKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G+KS+ E + + RL IGIG PP T + +L FSS ER
Sbjct: 170 GVKSVMEHLDGCREFPRLCIGIGNPPGTMDMRAFLLQKFSSTER 213
>gi|317178202|dbj|BAJ55991.1| peptidyl-tRNA hydrolase [Helicobacter pylori F16]
Length = 186
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D I + K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLISELDLSFTFSSKHNACLCIYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK L L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYKTKEL---LIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + ++ HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISKGMG---VVEHVLSKFHKNEEPLKNAVFEHAKNALKFFTESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|259908624|ref|YP_002648980.1| peptidyl-tRNA hydrolase [Erwinia pyrifoliae Ep1/96]
gi|224964246|emb|CAX55753.1| peptidyl-tRNA hydrolase [Erwinia pyrifoliae Ep1/96]
gi|283478596|emb|CAY74512.1| pth [Erwinia pyrifoliae DSM 12163]
gi|310767476|gb|ADP12426.1| peptidyl-tRNA hydrolase [Erwinia sp. Ejp617]
Length = 195
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 100/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + H ++ KF + + G L+ P
Sbjct: 6 LIVGLANPGAEYAATRHNAGAWYVDLLAERHNQSLKEENKFFGYTARLNIGGEDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++P E LV HD+LDL G + K GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVAAMATFYRIP-AEEILVAHDELDLPPGVAKFKQGGGHGGHNGLKDIISR 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P D ++ VLG + E+ + +D AR + K + +
Sbjct: 125 LGNNLNFHRLRIGIGHPGDRNKVVGFVLGKPQAAEKTLIDNAVDEAARCTEVWLKEDRLK 184
Query: 180 FLNHIVSVR 188
++ + S R
Sbjct: 185 AMSRLHSYR 193
>gi|261838771|gb|ACX98537.1| peptidyl-tRNA hydrolase [Helicobacter pylori 51]
Length = 186
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSSKHNACLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK L L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYKTKEL---LIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISKGMG---VIEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|194334187|ref|YP_002016047.1| peptidyl-tRNA hydrolase [Prosthecochloris aestuarii DSM 271]
gi|238693336|sp|B4S8L3|PTH_PROA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|194312005|gb|ACF46400.1| Aminoacyl-tRNA hydrolase [Prosthecochloris aestuarii DSM 271]
Length = 192
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 91/160 (56%), Gaps = 10/160 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH--FFPAWKKKF-HAEISEGQLDGLRTI 57
M +VAGLGNP Y RHNIGF +D + H F + K F +++I +
Sbjct: 1 MKLVAGLGNPEARYENTRHNIGFEVVDELARLHQSSFSSGKGNFLYSKIIHRNEP---IL 57
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KP T+MNLSG +++ M FYK+ ++ LV+ DDL++ GT+R++ G G NGLK
Sbjct: 58 LLKPMTYMNLSGNAVIAAMTFYKI-EYQDILVVCDDLNIALGTIRMRAKGSAGGQNGLKH 116
Query: 118 ISEKCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
I + C K ++ RLR+GI + VLG F++ ER
Sbjct: 117 IIQ-CLKRDDFARLRVGIAPDHPVSSYSSFVLGKFNAEER 155
>gi|301612877|ref|XP_002935937.1| PREDICTED: probable peptidyl-tRNA hydrolase-like [Xenopus
(Silurana) tropicalis]
Length = 222
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 101/175 (57%), Gaps = 10/175 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWK--KKFHAEISEGQLDGLRTIL 58
+V GLGN + RH+IG ++++ + WK ++ A++++ +DG+ +L
Sbjct: 29 LMVVGLGN--YRMAGTRHSIGMAVVNQLARRLNIADRWKADRQAGADLTDTDIDGMHVVL 86
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS- 117
+KP+ FMNL+G+S+ ++L EN ++HD+LD G + LK GG GHNG++S
Sbjct: 87 MKPRQFMNLNGKSVANAATKFRLKP-ENIYLLHDELDKPLGKVSLKFGGSARGHNGVRSC 145
Query: 118 ISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I+ RL +GIGRP D + + HVLG F+ E+ LLP D + RS+ L+
Sbjct: 146 ITCLQSDIMTRLLVGIGRPADCSSVEWHVLGRFNKAEQD-LLP--DVLERSVELV 197
>gi|297621051|ref|YP_003709188.1| Peptidyl-tRNA hydrolase [Waddlia chondrophila WSU 86-1044]
gi|297376352|gb|ADI38182.1| Peptidyl-tRNA hydrolase [Waddlia chondrophila WSU 86-1044]
Length = 206
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 106/187 (56%), Gaps = 4/187 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG +Y RHN+GF+ I+ H +KK A+ + Q+ L+ P
Sbjct: 10 VFVGLGNPGSKYAMTRHNMGFLLIESFARLHGVILKEEKKLQAKTGKCQIGEWTVHLLMP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSGQ++ +N++KL +N +V+ DD+ + FG LRL+ G GHNGLKS+ +
Sbjct: 70 LTYMNLSGQAVGRFINYFKL-TTDNVVVVTDDVAIPFGELRLREKGSAGGHNGLKSVEQH 128
Query: 122 CGKN-YKRLRIGIGRPPD-TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + Y RLR+GIGR D + + +VL F+ E L +++ ++L LL K +
Sbjct: 129 LGSHCYTRLRVGIGRGVDPSQELSDYVLDPFNKSEMEQLPSLLNQGVKALELLLKDSLQN 188
Query: 180 FLNHIVS 186
+N + S
Sbjct: 189 AMNVVNS 195
>gi|195536295|ref|ZP_03079302.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. novicida
FTE]
gi|194372772|gb|EDX27483.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. novicida
FTE]
Length = 186
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 11/168 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLRTI 57
++ GLGN G EY + RHN+G I +I SF P K + +++ +D +
Sbjct: 1 MIVGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNP----KLNCNLAKVSIDYNNVV 56
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+ P T+MN SG ++ +V NFYK+ E LV+HD+LD+D G +RLK GGG GHNGL+S
Sbjct: 57 LVFPTTYMNNSGLAVSKVANFYKIAPAE-ILVVHDELDIDSGEIRLKKGGGHGGHNGLRS 115
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
I++ G N Y RLRIGIG P + + +VL N S ++ + IDN
Sbjct: 116 INQHLGTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDN 163
>gi|323359425|ref|YP_004225821.1| peptidyl-tRNA hydrolase [Microbacterium testaceum StLB037]
gi|323275796|dbj|BAJ75941.1| peptidyl-tRNA hydrolase [Microbacterium testaceum StLB037]
Length = 194
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 101/176 (57%), Gaps = 4/176 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTILI 59
+++ GLGNPG Y RHNIG M +D + + K +A ++E L G + +L
Sbjct: 5 WVIVGLGNPGPRYEATRHNIGQMVVDELAARRSEAFRAHKANARVAETWLRPGGPKLVLA 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP +FMN+SG + FY + + E +V+HD+LD+ F T++LKTGGG GHNG++ ++
Sbjct: 65 KPNSFMNVSGGPAAGLARFYDV-DPERVVVVHDELDIPFDTVKLKTGGGHGGHNGVRDVA 123
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ G + R+R+GIGRP VL F + ER L +I + A ++ +L +
Sbjct: 124 KALGTPEFPRVRVGIGRPVGRQDPADWVLDPFGATERQTLPILISDAADAVEMLVE 179
>gi|118497595|ref|YP_898645.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. novicida
U112]
gi|134302016|ref|YP_001121985.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|187931853|ref|YP_001891838.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. mediasiatica
FSC147]
gi|254374410|ref|ZP_04989892.1| peptidyl-tRNA hydrolase [Francisella novicida GA99-3548]
gi|166199331|sp|A0Q6M6|PTH_FRATN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199332|sp|A4IY63|PTH_FRATW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238691571|sp|B2SH51|PTH_FRATM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118423501|gb|ABK89891.1| peptidyl-tRNA hydrolase [Francisella novicida U112]
gi|134049793|gb|ABO46864.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151572130|gb|EDN37784.1| peptidyl-tRNA hydrolase [Francisella novicida GA99-3548]
gi|187712762|gb|ACD31059.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. mediasiatica
FSC147]
Length = 191
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 11/168 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLRTI 57
++ GLGN G EY + RHN+G I +I SF P K + +++ +D +
Sbjct: 6 MIVGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNP----KLNCNLAKVSIDYNNVV 61
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+ P T+MN SG ++ +V NFYK+ E LV+HD+LD+D G +RLK GGG GHNGL+S
Sbjct: 62 LVFPTTYMNNSGLAVSKVANFYKIAPAE-ILVVHDELDIDSGEIRLKKGGGHGGHNGLRS 120
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
I++ G N Y RLRIGIG P + + +VL N S ++ + IDN
Sbjct: 121 INQHLGTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDN 168
>gi|317182702|dbj|BAJ60486.1| peptidyl-tRNA hydrolase [Helicobacter pylori F57]
Length = 186
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D I + K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLISELDLSFTFSSKHNACLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK L L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYKTKEL---LIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + ++ HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISKGMG---VVEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|317010129|gb|ADU80709.1| peptidyl-tRNA hydrolase [Helicobacter pylori India7]
Length = 186
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 103/190 (54%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSSKHNAYLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK+ L L++HDDLDL G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYKIKEL---LIVHDDLDLPLGVVRFKKGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E + ++ +L + D +
Sbjct: 114 VLCSNSYYRLRVGISK---GIGVIEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|300716399|ref|YP_003741202.1| Peptidyl-tRNA hydrolase [Erwinia billingiae Eb661]
gi|299062235|emb|CAX59352.1| Peptidyl-tRNA hydrolase [Erwinia billingiae Eb661]
Length = 195
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + H + KF+ + + G L+ P
Sbjct: 6 LIVGLANPGAEYAATRHNAGAWYVDLLAQRHNQALKEESKFYGYTARLNIGGEDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E L+ HD+LDL G + K GGG GHNGLK I K
Sbjct: 66 TTFMNLSGKAVAAMATFYRI-TPEEILIAHDELDLPPGVAKFKQGGGHGGHNGLKDIISK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P D ++ VLG S E+ + ID AR + K + +
Sbjct: 125 LGNNLNFHRLRIGIGHPGDRNKVVGFVLGKPQSAEQSLIDNAIDEAARCTEVWLKEDRLK 184
Query: 180 FLNHIVSVR 188
+N + S +
Sbjct: 185 AMNRLHSFK 193
>gi|330443833|ref|YP_004376819.1| peptidyl-tRNA hydrolase [Chlamydophila pecorum E58]
gi|328806943|gb|AEB41116.1| Peptidyl-tRNA hydrolase [Chlamydophila pecorum E58]
Length = 186
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 7/159 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT----IL 58
+V +GNPG Y +RHN+GF+ + + PA+K ++D T +
Sbjct: 5 LVVAIGNPGKAYNFSRHNVGFLLAEWLVRELGGPAFKPFSKCVSLMTKVDSPSTSESLVF 64
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
IKP+T++NLSG+++L F+ L + E+ LV+ DD++ DFG +RL+ G GH G+KSI
Sbjct: 65 IKPETYVNLSGKAVLAAKKFFSL-SPEHILVLADDVNRDFGDVRLRYQAGSGGHKGIKSI 123
Query: 119 SEKCGKN-YKRLRIGIGRPPDTA-HIIRHVLGNFSSPER 155
G N + +LR+G+GRP + A + VLG+FS E+
Sbjct: 124 VASLGSNLFWQLRLGVGRPDNRAVGLSDFVLGDFSCEEK 162
>gi|255327296|ref|ZP_05368370.1| aminoacyl-tRNA hydrolase [Rothia mucilaginosa ATCC 25296]
gi|255295576|gb|EET74919.1| aminoacyl-tRNA hydrolase [Rothia mucilaginosa ATCC 25296]
Length = 195
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 106/179 (59%), Gaps = 7/179 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQL--DGLRTI 57
+++ GLGNPG Y + RHNIG M +D + ++KK K A + EG+L G + +
Sbjct: 5 WLIVGLGNPGPNYAKTRHNIGQMVLDELAK-EVGGSFKKHSKASAVVVEGRLGFGGPKAV 63
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+K +MN SG + + FY + + ++ +V+HD+LD+ F T++LK GGG+ GHNGL+
Sbjct: 64 LMKSLGYMNTSGGPVSAIAKFYGI-DPDHIIVVHDELDIPFDTIKLKIGGGEGGHNGLRD 122
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
I++ G K+Y R+R GIGRPP VL FSS E L +I N A + +L K
Sbjct: 123 ITKALGTKDYYRVRTGIGRPPGRMDTADFVLKPFSSTEAKDLPFLISNAADATMMLVKE 181
>gi|168830301|gb|ACA34398.1| Pth [uncultured bacterium pTW2]
Length = 193
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 87/171 (50%), Gaps = 3/171 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN GF +D + + K E + ++ G L+KP
Sbjct: 6 LIVGLGNPGPEHLRTRHNAGFWFVDALAQQCGARFGLESKLFGETCKVEIAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + ++K+ E L+ HD+LDL G RLK GG G NGL+ +
Sbjct: 66 ATFMNLSGKSVTAALRYWKIEPGE-ALLAHDELDLPPGAARLKFDGGHGGQNGLRDTMQL 124
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G + RLRIGIG P + VLG + +L I N LPL
Sbjct: 125 LGHGRFHRLRIGIGHPGHKDRVTPWVLGKPGRDDEAAILHAIGNALDVLPL 175
>gi|152979077|ref|YP_001344706.1| peptidyl-tRNA hydrolase [Actinobacillus succinogenes 130Z]
gi|171704338|sp|A6VP74|PTH_ACTSZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|150840800|gb|ABR74771.1| Aminoacyl-tRNA hydrolase [Actinobacillus succinogenes 130Z]
Length = 194
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G IDR+ F+F + KF + + +DG + P
Sbjct: 6 LIVGLGNPGDKYADTRHNAGEWLIDRLSRRFNFTLKDEAKFFGKTARTVIDGHEIRFLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ E L+ HD+LDL GT+++K GGG GHNGLK +
Sbjct: 66 ATFMNLSGKAIGALASFYRI-RPEEILLAHDELDLPPGTVKIKQGGGHGGHNGLKDTIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G KN+ RLRIGIG P D + +VLG S + + +D + +L K
Sbjct: 125 LGNNKNFYRLRIGIGHPGDRNLVTSYVLGKPSPADWALIDKALDEAVVCVEILLK 179
>gi|30350188|gb|AAP31496.1| putative peptidyl-tRNA hydrolase [Western X phytoplasma]
Length = 205
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 88/142 (61%), Gaps = 14/142 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-------KFHAEISEGQLDG 53
M ++ GLGNPG + HNIGFM I+ + WKK + + +S QL+
Sbjct: 19 MKLIVGLGNPGKMFELTPHNIGFMLINYLEK-----EWKKNILTTKKELSSIVSHLQLEQ 73
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
+L++PQT+MN+SG+++ ++M Y +P ++ LV+ DD++L+ G +LK GG GHN
Sbjct: 74 ETILLVQPQTYMNISGKAIKQLMLKYNIPK-DDVLVLVDDINLEPGAFKLKYKGGHGGHN 132
Query: 114 GLKSISEKC-GKNYKRLRIGIG 134
GL++I + K++KRLRIG+G
Sbjct: 133 GLRNIIDMLHSKDFKRLRIGVG 154
>gi|119357218|ref|YP_911862.1| peptidyl-tRNA hydrolase [Chlorobium phaeobacteroides DSM 266]
gi|166199323|sp|A1BGB1|PTH_CHLPD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119354567|gb|ABL65438.1| peptidyl-tRNA hydrolase [Chlorobium phaeobacteroides DSM 266]
Length = 190
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 91/174 (52%), Gaps = 23/174 (13%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT---- 56
M +V GLGNP Y RHN+GF +D + + F +G+ + L T
Sbjct: 1 MKLVVGLGNPEPRYAGTRHNVGFDVLDTLAA---------TFQTRFGKGKGNYLSTKISH 51
Query: 57 -----ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG 111
IL+KP T+MNLSG +++ MNFYK+ L++ DDL+L G++RL+ G G
Sbjct: 52 RNRSVILLKPMTYMNLSGHAVVAAMNFYKVSE-SGLLIVCDDLNLPAGSIRLRAKGSAGG 110
Query: 112 HNGLKSISEKCG-KNYKRLRIGIGRPPDTA--HIIRHVLGNFSSPERYFLLPII 162
NGLK I E G + + RLR+GI RP D VLG F+ ER + +I
Sbjct: 111 QNGLKHIIECLGSEGFARLRVGI-RPLDRPLHSFSSFVLGKFTEEERIVMEKVI 163
>gi|197294654|ref|YP_001799195.1| peptidyl-tRNA hydrolase [Candidatus Phytoplasma australiense]
gi|226723258|sp|B1VAH1|PTH_PHYAS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|171853981|emb|CAM11944.1| Peptidyl-tRNA hydrolase [Candidatus Phytoplasma australiense]
Length = 189
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 98/164 (59%), Gaps = 3/164 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
I+ GLGNPG E+ HNIGF+ ++ + + + + QL+ + L+KPQ
Sbjct: 4 IIIGLGNPGKEFQNTYHNIGFLALESFLKNNKHQMIPNSYQGHLYQIQLNNCISFLVKPQ 63
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
+MN SG+ + ++++ Y++ +E+ LVI DD+ L G ++L+ GG AGHNGL++I E C
Sbjct: 64 MYMNSSGKVVKKILDAYQIK-IEDILVILDDIYLPEGKIKLRPQGGHAGHNGLRNIIECC 122
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
N +KRL+IG+G + + +++L F+ ++ +L ID I
Sbjct: 123 NTNKFKRLKIGVGYDSNIP-LNQYLLTPFNLHQKKQILQNIDKI 165
>gi|317179674|dbj|BAJ57462.1| peptidyl-tRNA hydrolase [Helicobacter pylori F30]
Length = 186
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D I + K +A + + I +
Sbjct: 1 MMLLVGLGNPTLRYAHTRHNAGFDILDSLISELDLSFTFSSKHNACLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYKTKEI---LIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + ++ HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISKGMG---VVEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|152970789|ref|YP_001335898.1| peptidyl-tRNA hydrolase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|206576264|ref|YP_002237900.1| peptidyl-tRNA hydrolase [Klebsiella pneumoniae 342]
gi|238895303|ref|YP_002920038.1| peptidyl-tRNA hydrolase [Klebsiella pneumoniae NTUH-K2044]
gi|288934813|ref|YP_003438872.1| peptidyl-tRNA hydrolase [Klebsiella variicola At-22]
gi|290508956|ref|ZP_06548327.1| peptidyl-tRNA hydrolase [Klebsiella sp. 1_1_55]
gi|330009877|ref|ZP_08306632.1| aminoacyl-tRNA hydrolase [Klebsiella sp. MS 92-3]
gi|166199336|sp|A6TAP7|PTH_KLEP7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226694258|sp|B5XW43|PTH_KLEP3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|150955638|gb|ABR77668.1| peptidyl-tRNA hydrolase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|206565322|gb|ACI07098.1| peptidyl-tRNA hydrolase [Klebsiella pneumoniae 342]
gi|238547620|dbj|BAH63971.1| peptidyl-tRNA hydrolase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|288889522|gb|ADC57840.1| peptidyl-tRNA hydrolase [Klebsiella variicola At-22]
gi|289778350|gb|EFD86347.1| peptidyl-tRNA hydrolase [Klebsiella sp. 1_1_55]
gi|328534672|gb|EGF61238.1| aminoacyl-tRNA hydrolase [Klebsiella sp. MS 92-3]
Length = 194
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + H P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLADRHRAPLREESKFFGYTSRINLAGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMATFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLR+GIG P D ++ VLG + E+ + +D AR + K
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPASEQKLIDDAVDEAARCTEIWLK 178
>gi|56707800|ref|YP_169696.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110670271|ref|YP_666828.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
FSC198]
gi|224456870|ref|ZP_03665343.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254370298|ref|ZP_04986303.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
FSC033]
gi|254874614|ref|ZP_05247324.1| pth, peptidyl-tRNA hydrolase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|68052885|sp|Q5NGZ6|PTH_FRATT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390942|sp|Q14IE8|PTH_FRAT1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54112801|gb|AAV29034.1| NT02FT1020 [synthetic construct]
gi|56604292|emb|CAG45313.1| Peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110320604|emb|CAL08696.1| Peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
FSC198]
gi|151568541|gb|EDN34195.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
FSC033]
gi|254840613|gb|EET19049.1| pth, peptidyl-tRNA hydrolase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282158974|gb|ADA78365.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
NE061598]
Length = 191
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 11/168 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLRTI 57
++ GLGN G EY + RHN+G I +I SF P K + +++ +D +
Sbjct: 6 MIIGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNP----KLNCNLAKVSIDYNNVV 61
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+ P T+MN SG ++ +V NFYK+ E LV+HD+LD+D G +RLK GGG GHNGL+S
Sbjct: 62 LVFPTTYMNNSGLAVSKVANFYKIAPAE-ILVVHDELDIDSGEIRLKKGGGHGGHNGLRS 120
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
I++ G N Y RLRIGIG P + + +VL N S ++ + IDN
Sbjct: 121 INQHLGTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDN 168
>gi|308186578|ref|YP_003930709.1| Peptidyl-tRNA hydrolase [Pantoea vagans C9-1]
gi|308057088|gb|ADO09260.1| Peptidyl-tRNA hydrolase [Pantoea vagans C9-1]
Length = 195
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + H + KF+ + + G L+ P
Sbjct: 6 LIVGLANPGAEYAATRHNAGAWYLDLLAERHNQSLKEESKFYGYTARLAIAGEDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 66 TTFMNLSGKAVAAMATFYRI-TPEEILVAHDELDLPPGVAKFKQGGGHGGHNGLKDIISK 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P D + VLG + E+ + ID AR L K + +
Sbjct: 125 LGNNNNFHRLRIGIGHPGDRNKVTGFVLGKPPASEQKLIDDAIDEAARCTELWLKEDRIK 184
Query: 180 FLNHIVSVR 188
+N + + R
Sbjct: 185 AMNRLHAFR 193
>gi|206896459|ref|YP_002247108.1| peptidyl-tRNA hydrolase [Coprothermobacter proteolyticus DSM 5265]
gi|226694249|sp|B5Y8L1|PTH_COPPD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|206739076|gb|ACI18154.1| peptidyl-tRNA hydrolase [Coprothermobacter proteolyticus DSM 5265]
Length = 192
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 99/182 (54%), Gaps = 8/182 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE--GQLDGLRTIL 58
M ++ GLGNPG EY + RHNIG+ +D + + + ++ + E +L +
Sbjct: 1 MLLIVGLGNPGIEYEKTRHNIGWWVLDLLRTKLTGLNLRLLCYSRVYELKHELKKEVDFI 60
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+ P T+MN SG++ V Y+ P ++ +VIHDDLDL G R++ GG AGH G+ SI
Sbjct: 61 VYPLTYMNNSGKA---VKCLYE-PRMD-LVVIHDDLDLTVGKTRVRFGGSSAGHKGVSSI 115
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+ G + + R+++GIGRP +I +VLG E+ L+ D IA L LL +
Sbjct: 116 IDALGTDSFWRVKVGIGRPFSKQEVINYVLGEPQKNEKEVLIRAADYIADQLCLLITDRN 175
Query: 178 VS 179
S
Sbjct: 176 FS 177
>gi|307566360|ref|ZP_07628799.1| putative peptidyl-tRNA hydrolase [Prevotella amnii CRIS 21A-A]
gi|307344937|gb|EFN90335.1| putative peptidyl-tRNA hydrolase [Prevotella amnii CRIS 21A-A]
Length = 190
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 95/168 (56%), Gaps = 3/168 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG+EY RHN GFM +D + ++ K + I+E L G + IL+KP
Sbjct: 4 YLICGLGNPGNEYEGTRHNTGFMVLDALAKASN-AVFEDKRYGFIAEFTLKGRKIILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + LVI DD+ L G RLK G + GHNGL +I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENIDQ-SRLLVISDDIALPLGAFRLKGSGSNGGHNGLGNIEQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
GK+Y RLR+GIG + VLG++S + L P I N+A +
Sbjct: 122 IGKDYPRLRMGIGNDYAKGKQVDWVLGHYSEEDMKILQPSI-NLAEDI 168
>gi|149925759|ref|ZP_01914023.1| peptidyl-tRNA hydrolase [Limnobacter sp. MED105]
gi|149825876|gb|EDM85084.1| peptidyl-tRNA hydrolase [Limnobacter sp. MED105]
Length = 235
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 98/187 (52%), Gaps = 6/187 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G ++ + H F K+F +++ + G L+ P
Sbjct: 45 LIVGLGNPGPQYADTRHNAGVWYLEALARKHNVFLQSDKRFFGDLARIKFAGEDVWLLFP 104
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ++ + F+K+ E LV HD+LDL G +++K GGG AGHNGLK +
Sbjct: 105 TTFMNRSGQAVGALAKFFKIKP-EEILVAHDELDLLPGQIKMKKGGGFAGHNGLKDMHAH 163
Query: 122 CGK-NYKRLRIGIGRPPD---TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G ++ R RIGIG P + VL SS ++ + ID + + L+ K +
Sbjct: 164 LGSGDFWRARIGIGHPRSLNLQQGVADFVLHRPSSEQQQVIDKSIDVLLKHTELILKGQI 223
Query: 178 VSFLNHI 184
HI
Sbjct: 224 GQATTHI 230
>gi|325578759|ref|ZP_08148806.1| aminoacyl-tRNA hydrolase [Haemophilus parainfluenzae ATCC 33392]
gi|325159583|gb|EGC71715.1| aminoacyl-tRNA hydrolase [Haemophilus parainfluenzae ATCC 33392]
Length = 194
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E RHN G I+R+ F+ + KF + + ++G + P
Sbjct: 6 LIVGLGNPGDKYAETRHNAGEWLIERLARRFNVSLNAENKFFGYVGKTLINGKEVRFLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LV+HD+LDL GT++LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALANFYRIKP-EEILVLHDELDLPPGTVKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + VL + ER L +D + LL K V
Sbjct: 125 LGNSNNFYRLRIGIGHPGHRDLVSGFVLNKPAPAEREVLDKALDEATDCIELLFKEGMVK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|208779396|ref|ZP_03246742.1| peptidyl-tRNA hydrolase [Francisella novicida FTG]
gi|254372959|ref|ZP_04988448.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. novicida
GA99-3549]
gi|151570686|gb|EDN36340.1| peptidyl-tRNA hydrolase [Francisella novicida GA99-3549]
gi|208745196|gb|EDZ91494.1| peptidyl-tRNA hydrolase [Francisella novicida FTG]
Length = 191
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 11/168 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLRTI 57
++ GLGN G EY + RHN+G I +I SF P K + +++ +D +
Sbjct: 6 MIVGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNP----KLNCNLAKVSIDYNNVV 61
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+ P T+MN SG ++ +V NFYK+ E LV+HD+LD+D G +RLK GGG GHNGL+S
Sbjct: 62 LVFPTTYMNNSGLAVSKVANFYKIAPAE-ILVVHDELDIDSGEIRLKKGGGHGGHNGLRS 120
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
I++ G N Y RLRIGIG P + + +VL N S ++ + IDN
Sbjct: 121 INQHLGTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDNAIDN 168
>gi|188534021|ref|YP_001907818.1| Peptidyl-tRNA hydrolase [Erwinia tasmaniensis Et1/99]
gi|238689695|sp|B2VEI9|PTH_ERWT9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|188029063|emb|CAO96931.1| Peptidyl-tRNA hydrolase [Erwinia tasmaniensis Et1/99]
Length = 195
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G D + H + KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAATRHNAGAWYADLLAERHNQSLKEESKFFGFTARLNLGGEDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++P E LV HD+LDL G + K GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVAAMATFYRIP-AEEILVAHDELDLPPGVAKFKQGGGHGGHNGLKDIISR 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +N+ RLRIGIG P D ++ VLG + E+ + +D R + K + +
Sbjct: 125 LGNNQNFHRLRIGIGHPGDRQKVVGFVLGKPQAAEQRLIDDAVDEAVRCTEVWMKEDRLK 184
Query: 180 FLNHIVSVR 188
+N + S +
Sbjct: 185 AMNRLHSFK 193
>gi|61651816|ref|NP_001013348.1| probable peptidyl-tRNA hydrolase [Danio rerio]
gi|60416153|gb|AAH90788.1| Peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) [Danio rerio]
gi|182890234|gb|AAI65428.1| Ptrh1 protein [Danio rerio]
Length = 230
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 90/160 (56%), Gaps = 7/160 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWK--KKFHAEISEGQLDGLRTILI 59
+V GLGNPG +RH++G + + P W+ +K E+ QL ++ +L+
Sbjct: 22 MVVGLGNPG--MTGSRHSVGMAVLTTLAEHLGAPDGWRSDRKVSGEVVVTQLQDVQLVLL 79
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+P+ MN++G S+ + + Y +P E+ L+IHD+LD G +K GG GHNG++S
Sbjct: 80 RPKLLMNVNGVSVAKAASRYLIPP-EHILLIHDELDKPLGKFGIKHGGSARGHNGVRSCV 138
Query: 120 EKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+ + RLRIGIGRP D I R+VLG FS E+ L
Sbjct: 139 DCLQTDVMPRLRIGIGRPSDKTPIDRYVLGRFSKEEQNVL 178
>gi|145590101|ref|YP_001156698.1| aminoacyl-tRNA hydrolase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|229485509|sp|A4T070|PTH_POLSQ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145048507|gb|ABP35134.1| peptidyl-tRNA hydrolase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 196
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 102/180 (56%), Gaps = 9/180 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ E+RHN GF +D + + +K+FH ++++ + +G L+KP
Sbjct: 4 LIVGLGNPGEEHTEDRHNAGFWFLDVLAKQLNSRFESEKRFHGKVAKAKWEGEDLFLLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSGQS+ + F+K+ E LV+ D+LDL GT RLK GGG GHNGLK I
Sbjct: 64 STYMNLSGQSVGALCRFHKITPAE-ILVVQDELDLKPGTARLKLGGGTGGHNGLKDIQAH 122
Query: 122 CGK-NYKRLRIGIGRPPDTA------HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
Y RLR+GIG P D A + +VL E+ + I+N + LPL K
Sbjct: 123 LSTPEYWRLRLGIGHPRDLAGDGRPMDVADYVLRRPQLAEQKMIDASIENGLQILPLFLK 182
>gi|312797357|ref|YP_004030279.1| peptidyl-tRNA hydrolase [Burkholderia rhizoxinica HKI 454]
gi|312169132|emb|CBW76135.1| Peptidyl-tRNA hydrolase (EC 3.1.1.29) [Burkholderia rhizoxinica HKI
454]
Length = 199
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 87/139 (62%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF ID++ H +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYAATRHNAGFWFIDQLAHETGATLRDERRFHGAYAKTRLHGAEIHLLQP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QTFMN SG S++ V F+K LP ++ LV+HD+LDL G +LK GGG GHNGLK IS
Sbjct: 64 QTFMNRSGLSVVAVAQFFKILP--QSILVVHDELDLPPGVAKLKLGGGSGGHNGLKDISA 121
Query: 121 KCG-KNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 122 HLSTQQYWRLRIGIGHPRD 140
>gi|308183600|ref|YP_003927727.1| peptidyl-tRNA hydrolase [Helicobacter pylori PeCan4]
gi|308065785|gb|ADO07677.1| peptidyl-tRNA hydrolase [Helicobacter pylori PeCan4]
Length = 186
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 103/194 (53%), Gaps = 19/194 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLR 55
M ++ GLGNP Y RHN GF +D + SF F P K +A + +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSP----KHNACLCVYK----D 52
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
IL+KPQT+MNLSG+S+L NFYK E L++HDDLDL G +R K GGG+ GHNGL
Sbjct: 53 FILLKPQTYMNLSGESVLSAKNFYK---TEELLIVHDDLDLSLGVVRFKKGGGNGGHNGL 109
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KSI C +Y RLR+GI + +I HVL F E ++ +L +
Sbjct: 110 KSIDTLCSNSYYRLRVGISKGIG---VIEHVLSKFHKNEEPLKNAAFEHAKNALKFFIES 166
Query: 176 EDVSFLNHIVSVRK 189
D + + + +++K
Sbjct: 167 HDFNAMQNRFTLKK 180
>gi|291617188|ref|YP_003519930.1| Pth [Pantoea ananatis LMG 20103]
gi|291152218|gb|ADD76802.1| Pth [Pantoea ananatis LMG 20103]
gi|327393643|dbj|BAK11065.1| peptidyl-tRNA hydrolase Pth [Pantoea ananatis AJ13355]
Length = 204
Score = 98.2 bits (243), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 97/185 (52%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + H ++ KF+ + L G L+ P
Sbjct: 15 LIVGLANPGAEYAATRHNAGAWYLDLLAERHNQSLKEEAKFYGYTARLALAGEDVRLLVP 74
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 75 TTFMNLSGKAVAAMATFYRIAP-EEILVAHDELDLPPGIAKFKQGGGHGGHNGLKDIISK 133
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P D + VLG + E+ + ID AR L K + +
Sbjct: 134 LGNNNNFHRLRIGIGHPGDRNKVTGFVLGKPPASEQKLIDDAIDEAARCTELWLKEDRIK 193
Query: 180 FLNHI 184
+N +
Sbjct: 194 AMNRL 198
>gi|262041842|ref|ZP_06015027.1| aminoacyl-tRNA hydrolase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259040834|gb|EEW41920.1| aminoacyl-tRNA hydrolase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 194
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + H P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLADRHRAPLREESKFFGYTSRINLAGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMATFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLR+GIG P D ++ VLG + E+ + +D AR + K
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPLASEQKLIDDAVDEAARCTEIWLK 178
>gi|114561899|ref|YP_749412.1| peptidyl-tRNA hydrolase [Shewanella frigidimarina NCIMB 400]
gi|119391003|sp|Q087J1|PTH_SHEFN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|114333192|gb|ABI70574.1| peptidyl-tRNA hydrolase [Shewanella frigidimarina NCIMB 400]
Length = 195
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 94/174 (54%), Gaps = 6/174 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G + + P + K+ + L G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVQELARICNVPLVAESKYFGVTARATLHGRDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
T+MNLSG+S+ + NF++ LP E LV HD+LD+D G + K GGG GHNGLK I
Sbjct: 66 TTYMNLSGKSVAALANFFRILP--EEILVAHDELDMDPGVAKFKLGGGHGGHNGLKDIIA 123
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G KN+ RLRIGIG P D + +VLG + E+ + ID RS +L
Sbjct: 124 SLGNDKNFHRLRIGIGHPGDKNKVSGYVLGRAPAVEQERINAAIDEAVRSTEIL 177
>gi|224534131|ref|ZP_03674711.1| aminoacyl-tRNA hydrolase [Borrelia spielmanii A14S]
gi|224514556|gb|EEF84870.1| aminoacyl-tRNA hydrolase [Borrelia spielmanii A14S]
Length = 188
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN+GF +D+I S + K+K E SE ++ R +L+KP
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIVSKNGL-CLKRKKKYEYSELRMISRRVVLVKP 61
Query: 62 QTFMNLSGQSLLEVM-NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
T+MNLSG + +FY ++N LV+ D++DL G RLK G + HNGLKSIS
Sbjct: 62 LTYMNLSGSLFPSIFSDFYMC--VKNLLVVLDNVDLPLGKCRLKERGSMSTHNGLKSISS 119
Query: 121 KCG-KNYKRLRIGIG 134
G NY RL IG+G
Sbjct: 120 VLGSSNYSRLYIGVG 134
>gi|56476201|ref|YP_157790.1| peptidyl-tRNA hydrolase [Aromatoleum aromaticum EbN1]
gi|68052887|sp|Q5P722|PTH_AZOSE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56312244|emb|CAI06889.1| peptidyl-tRNA hydrolase [Aromatoleum aromaticum EbN1]
Length = 196
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 100/176 (56%), Gaps = 5/176 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG EY E RHN GF +R+ + + +FH ++ + G+ L+ P
Sbjct: 8 LVVGLGNPGAEYTETRHNAGFRFCERLADKLGVRFSHESRFHGFVANARDAGV--WLLMP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SGQ++ + FY++ E LV+HD+LD+ G LRLK GGG GHNGLK S
Sbjct: 66 QTYMNRSGQAVGALARFYRIAPAE-ILVVHDELDIPPGQLRLKFGGGLGGHNGLKDTSAH 124
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
N Y RLRIGIG P D ++ +VL E+ + +D + P++A+ E
Sbjct: 125 LATNDYWRLRIGIGHPGDRNEVVNYVLKPARREEQGQIDEALDRALAAWPMIARGE 180
>gi|62263425|gb|AAX78159.1| unknown protein [synthetic construct]
Length = 226
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 100/168 (59%), Gaps = 11/168 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLRTI 57
++ GLGN G EY + RHN+G I +I SF P K + +++ +D +
Sbjct: 32 MIIGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNP----KLNCNLAKVSIDYNNVV 87
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+ P T+MN SG ++ +V NFYK+ E LV+HD+LD+D G +RLK GGG GHNGL+S
Sbjct: 88 LVFPTTYMNNSGLAVSKVANFYKIAPAE-ILVVHDELDIDSGEIRLKKGGGHGGHNGLRS 146
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
I++ G N Y RLRIGIG P + + +VL N S ++ + IDN
Sbjct: 147 INQHLGTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDN 194
>gi|301155945|emb|CBW15415.1| peptidyl-tRNA hydrolase [Haemophilus parainfluenzae T3T1]
Length = 194
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E RHN G I+R+ F+ + KF + + ++G + P
Sbjct: 6 LIVGLGNPGDKYAETRHNAGEWLIERLARRFNVSLNAENKFFGYVGKTLINGKEVRFLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LV+HD+LDL GT++LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALANFYRIKP-EEILVLHDELDLPPGTVKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + VL + ER L +D + LL K V
Sbjct: 125 LGNSNNFYRLRIGIGHPGHRDLVSGFVLNKPAPAEREALDKALDEATDCIELLFKEGMVK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|328675850|gb|AEB28525.1| Peptidyl-tRNA hydrolase [Francisella cf. novicida 3523]
Length = 191
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 100/168 (59%), Gaps = 11/168 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLRTI 57
++ GLGN G EY + RHN+G I +I SF P K + +++ +D I
Sbjct: 6 MIVGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNP----KLNCNLAKVSIDYNNVI 61
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+ P T+MN SG ++ +V NFYK+ E LV+HD+LD+D G +RLK GGG GHNGL+S
Sbjct: 62 LVFPTTYMNNSGLAVGKVANFYKIE-PEEILVVHDELDIDSGEIRLKKGGGHGGHNGLRS 120
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
I++ G N Y RLRIGIG P + + +VL N S ++ + IDN
Sbjct: 121 INQHLGNNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDNAIDN 168
>gi|304382453|ref|ZP_07364951.1| aminoacyl-tRNA hydrolase [Prevotella marshii DSM 16973]
gi|304336406|gb|EFM02644.1| aminoacyl-tRNA hydrolase [Prevotella marshii DSM 16973]
Length = 189
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 91/164 (55%), Gaps = 3/164 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY E RHN GFM +D ++ + + I+E + G + IL+KP
Sbjct: 4 YLIVGLGNPGIEYEETRHNTGFMILDAFAKAS-NSVFEDRRYGYIAETSVKGRKLILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ MN + L LVI DDL L G LRLK G + GHNGL +I
Sbjct: 63 TTFMNLSGNAVRYWMNKEHI-ELSRLLVISDDLSLPLGILRLKGNGSNGGHNGLGNIQSV 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G + Y RLR+GIG I VLG +S E LLP I+
Sbjct: 122 LGTQQYARLRVGIGNDFPRGMQIDWVLGKYSHEEMETLLPRIET 165
>gi|240047432|ref|YP_002960820.1| peptidyl-tRNA hydrolase [Mycoplasma conjunctivae HRC/581]
gi|239985004|emb|CAT04997.1| Peptidyl-tRNA hydrolase [Mycoplasma conjunctivae]
Length = 189
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSF--HFFPAWKKKFHAEISEGQLDGLRTIL 58
M ++ GLGNPG +Y + +HN+GF ID + F K H I+E IL
Sbjct: 1 MKLIVGLGNPGKQYEKTKHNVGFWAIDALAEKIGAKFKQHLPKTHYSIAE----DYEIIL 56
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLE--NYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+KPQTFMNLSG++++E F K ++ + LVI+DD+DL G ++ GG G G++
Sbjct: 57 LKPQTFMNLSGEAIVEFRAFCKSKGIKISDMLVIYDDMDLQIGQAIMRAQGGANGQKGMQ 116
Query: 117 SISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
+I + K KR++IGIGR + H +VL F+ +++ + +I +
Sbjct: 117 NIIDLLATKEIKRIKIGIGR---SQHAADYVLSPFNLEDQHKIEQVIQKVVE 165
>gi|217031843|ref|ZP_03437346.1| hypothetical protein HPB128_199g51 [Helicobacter pylori B128]
gi|298735533|ref|YP_003728054.1| PTH1 family peptidyl-tRNA hydrolase [Helicobacter pylori B8]
gi|216946495|gb|EEC25097.1| hypothetical protein HPB128_199g51 [Helicobacter pylori B128]
gi|298354718|emb|CBI65590.1| peptidyl-tRNA hydrolase, PTH1 family [Helicobacter pylori B8]
Length = 186
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLR 55
M ++ GLGNP Y RHN GF +D + SF F P K +A + +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLISELNLSFTFSP----KHNAYLCVYK----D 52
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
IL+KPQT+MNLSG+S+L NFYK E L++HDDLDL G +R K GGG+ GHNGL
Sbjct: 53 FILLKPQTYMNLSGESVLSAKNFYK---TEELLIVHDDLDLPLGVVRFKNGGGNGGHNGL 109
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KSI C +Y RLR+GI + +I HVL F E + ++ +L +
Sbjct: 110 KSIDLLCSNSYYRLRVGISK---GIGVIDHVLSKFHKNEEPLKNAVFEHAKNALKFFIES 166
Query: 176 EDVSFLNHIVSVRK 189
D + + + +++K
Sbjct: 167 HDFNAMQNRFTLKK 180
>gi|126297639|ref|XP_001365569.1| PREDICTED: similar to peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae), [Monodelphis domestica]
Length = 218
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 99/187 (52%), Gaps = 18/187 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKK--FHAEISEGQLDGLRTIL 58
++VAGLGN + RH++G ++++ + WKK+ HA+++ L +L
Sbjct: 31 WLVAGLGN--YRLQGTRHSVGMAVLNQLAQHLNVADQWKKQHQCHADVAVACLGEAELVL 88
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP+ FMN++G S+ + Y+L + YLV HD+LD G L +K GG +GHNG++S
Sbjct: 89 LKPRRFMNVNGLSVAQAAKMYQLAAEDIYLV-HDELDKPLGKLAMKLGGSASGHNGVRSC 147
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
N RLR+GIGRP + R+VL F++ E+ LP L ++
Sbjct: 148 ISCLNSNVMPRLRVGIGRPTHPGAVERYVLDRFTAAEQ-----------EQLPQLLEQAT 196
Query: 178 VSFLNHI 184
L+HI
Sbjct: 197 ELLLSHI 203
>gi|62422026|gb|AAX82595.1| putative peptidyl-tRNA hydrolase [Lactobacillus reuteri]
Length = 186
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 91/157 (57%), Gaps = 4/157 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM +D++ +H K A G ++G + +L+
Sbjct: 1 MKMIVGLGNIGTRYDETRHNTGFMVVDQLARDYHLGAFTHLKQEAVAVSGVINGEKVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG++ ++++Y + + ++++DDLD+ G +RLKT G G NGLKSI
Sbjct: 61 KPTTFMNDSGRAGGPLVDYYDIDLDD-LVIVNDDLDMPGGKVRLKTHGASGGDNGLKSII 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G KN+ R++ GI P + HVLG FS ER
Sbjct: 120 SALGTKNFNRVKGGIDHPQHGT-VGSHVLGEFSKEER 155
>gi|74316407|ref|YP_314147.1| peptidyl-tRNA hydrolase [Thiobacillus denitrificans ATCC 25259]
gi|119391033|sp|Q3SLR3|PTH_THIDA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|74055902|gb|AAZ96342.1| peptidyl-tRNA hydrolase [Thiobacillus denitrificans ATCC 25259]
Length = 202
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 102/176 (57%), Gaps = 7/176 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFM-CIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E RHN GF C ++ A + +FH + G R +L+ P
Sbjct: 11 LIVGLGNPGRDYEETRHNAGFWFCARLAQAWGAALAHESRFHGIVGR---HGTRWMLL-P 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SGQ++ + F+++ E LV+HD+LD+ G LRLK GGG GHNGLK I+
Sbjct: 67 QTFMNRSGQAVGALARFHRIAPAE-ILVVHDELDIPPGQLRLKFGGGMGGHNGLKDITAH 125
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G ++Y RLRIGIG P D + ++ +VL E+ + I+ LPL+ K E
Sbjct: 126 LGTQDYWRLRIGIGHPGDRSEVVNYVLKPPRREEQADIDAAIERALGLLPLIEKGE 181
>gi|167835374|ref|ZP_02462257.1| peptidyl-tRNA hydrolase [Burkholderia thailandensis MSMB43]
Length = 201
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 89/139 (64%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN+GF +D++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNVGFWLVDQLAREAGTTLRDERRFHGLYAKARLFGDEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ + +F+K LPN LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 64 QTYMNRSGQSVVALAHFFKLLPN--EILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 121
Query: 121 K-CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 122 HLSSQQYWRLRIGIGHPRD 140
>gi|15602029|ref|NP_245101.1| peptidyl-tRNA hydrolase [Pasteurella multocida subsp. multocida
str. Pm70]
gi|13431784|sp|P57820|PTH_PASMU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|12720383|gb|AAK02248.1| Pth [Pasteurella multocida subsp. multocida str. Pm70]
Length = 194
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 98/175 (56%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ FHF + KF + + ++G + P
Sbjct: 6 LIVGLGNPGDKYADTRHNAGEWLINRLARQFHFSLTPESKFSGKTARTVINGNEIRFLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LVIHD+LDL G ++K GGG GHNGL+ +
Sbjct: 66 TTFMNLSGKAISSLANFYRI-KPEEILVIHDELDLPPGVAKIKQGGGHGGHNGLRDTIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G KN+ RLR+GIG P D + +VL S + + +D + +L K
Sbjct: 125 LGNNKNFYRLRVGIGHPGDKNLVSAYVLNKPSLTDWQLIDKALDEATSCVDILIK 179
>gi|237654285|ref|YP_002890599.1| peptidyl-tRNA hydrolase [Thauera sp. MZ1T]
gi|237625532|gb|ACR02222.1| peptidyl-tRNA hydrolase [Thauera sp. MZ1T]
Length = 226
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 98/176 (55%), Gaps = 5/176 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY E RHN GF +R+ +++ +FH ++ + G+ L+ P
Sbjct: 11 LIVGLGNPGAEYSETRHNAGFWFCERLADQLGARYSFESRFHGLVANAREAGM--WLLMP 68
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SGQ++ + FY++ E LV+HD+LD+ G LRLK GGG GHNGLK S
Sbjct: 69 QTFMNRSGQAIGALARFYRIEPAE-ILVVHDELDIPPGQLRLKFGGGLGGHNGLKDTSAH 127
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G N Y RLRIGIG P D ++ VL E+ + +D P + + E
Sbjct: 128 LGTNDYWRLRIGIGHPGDRNEVVNFVLKPARREEQQQIDEALDKALAVWPQIVRGE 183
>gi|308064257|gb|ADO06144.1| peptidyl-tRNA hydrolase [Helicobacter pylori Sat464]
Length = 186
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 103/194 (53%), Gaps = 19/194 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLR 55
M ++ GLGNP Y RHN GF +D + SF F P K +A + +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLISELDLSFTFSP----KHNACLCVYK----D 52
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
I +KPQT+MNLSG+S+L NFYK L L++HDDLDLD G +R K GGG+ GHNGL
Sbjct: 53 FIFLKPQTYMNLSGESVLSAKNFYKTKEL---LIVHDDLDLDLGVVRFKNGGGNGGHNGL 109
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KSI C +Y RLR+GI + ++ HVL F E ++ +L +
Sbjct: 110 KSIDLLCSNSYYRLRVGISK---GMGVVEHVLSKFHKNEEPLKNAAFEHAKNALKFFIES 166
Query: 176 EDVSFLNHIVSVRK 189
D + + + +++K
Sbjct: 167 HDFNAMQNRFTLKK 180
>gi|282879283|ref|ZP_06288028.1| aminoacyl-tRNA hydrolase [Prevotella buccalis ATCC 35310]
gi|281298565|gb|EFA90989.1| aminoacyl-tRNA hydrolase [Prevotella buccalis ATCC 35310]
Length = 194
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 89/163 (54%), Gaps = 2/163 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GFM +D ++ K + ++E L G + IL+KP
Sbjct: 4 YLICGLGNPGAEYAGTRHNTGFMVLDAFAKASNI-VFEDKRYGFVAETSLKGRKIILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + + LV+ DD+ L G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENI-DQRRLLVVSDDVALPLGEFRLKGSGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G+NY RLR+GIG + VLG++ + L P ID
Sbjct: 122 IGQNYPRLRMGIGNEYPRGGQVDWVLGHYDETDMQVLQPAIDT 164
>gi|303233164|ref|ZP_07319837.1| aminoacyl-tRNA hydrolase [Atopobium vaginae PB189-T1-4]
gi|302480749|gb|EFL43836.1| aminoacyl-tRNA hydrolase [Atopobium vaginae PB189-T1-4]
Length = 220
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 2/150 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGN Y RHNIGF ID ++ AWK + ++ +L KPQ
Sbjct: 39 LIVGLGNADARYANTRHNIGFAVIDALYERLQLGAWKTQAGCLVASYAGPHGTVVLAKPQ 98
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN G ++ ++ + N + L++HD+LD G +RLK GG HNGL+S+S+K
Sbjct: 99 TYMNTCGGAIAKLAAKLGI-NARSILIVHDELDKASGVVRLKWAGGLNAHNGLRSVSQKL 157
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFS 151
G +++ RL+ GI RP + + +VL + S
Sbjct: 158 GTRDFCRLQCGIDRPQGSMAVADYVLQHLS 187
>gi|317013267|gb|ADU83875.1| peptidyl-tRNA hydrolase [Helicobacter pylori Lithuania75]
Length = 186
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLR 55
M ++ GLGNP Y RHN GF +D + SF F P K +A + +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSP----KHNACLCVYK----D 52
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
IL+KPQT+MNLSG+S+L NFYK L L++HDDLDL G +R K GGG+ GHNGL
Sbjct: 53 FILLKPQTYMNLSGESVLSAKNFYKPKEL---LIVHDDLDLPLGVVRFKNGGGNGGHNGL 109
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KSI C +Y RLR+GI + +I HVL F E + ++ +L +
Sbjct: 110 KSIDALCSNSYYRLRVGISK---GIGVIEHVLSKFHKNEEPLKNAVFEHAKNALKFFIES 166
Query: 176 EDVSFLNHIVSVRK 189
D + + + +++K
Sbjct: 167 HDFNAMQNRFTLKK 180
>gi|288928359|ref|ZP_06422206.1| aminoacyl-tRNA hydrolase [Prevotella sp. oral taxon 317 str. F0108]
gi|288331193|gb|EFC69777.1| aminoacyl-tRNA hydrolase [Prevotella sp. oral taxon 317 str. F0108]
Length = 189
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 2/162 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GFM +D ++ K + +S + G + +L+KP
Sbjct: 4 YLIVGLGNPGREYEATRHNTGFMILDAFAKASNI-VFEDKRYGFVSSAMVKGRKLVLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ ++ +P E+ LV+ DDL L GTLRLK G + GHNGL I +
Sbjct: 63 STFMNLSGNAVRYWLDKENIPQ-EHLLVVVDDLALPLGTLRLKGNGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G Y RLR+GIG + VLG + E L P I+
Sbjct: 122 IGPQYARLRVGIGNEFPRGGQVDWVLGEYDDEELKALEPAIE 163
>gi|308185267|ref|YP_003929400.1| peptidyl-tRNA hydrolase [Helicobacter pylori SJM180]
gi|308061187|gb|ADO03083.1| peptidyl-tRNA hydrolase [Helicobacter pylori SJM180]
Length = 186
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 89/156 (57%), Gaps = 11/156 (7%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S A+ K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFAFSPKHNAYLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK E L++HDDLDL G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSTKNFYK---TEELLIVHDDLDLPLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
C +Y RLR+GI + +I HVL F E
Sbjct: 114 LLCSNSYYRLRVGISK---GVGVIDHVLSKFHKNEE 146
>gi|134297000|ref|YP_001120735.1| peptidyl-tRNA hydrolase [Burkholderia vietnamiensis G4]
gi|134140157|gb|ABO55900.1| peptidyl-tRNA hydrolase [Burkholderia vietnamiensis G4]
Length = 211
Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 88/139 (63%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++P
Sbjct: 16 LIVGLGNPGAEYTATRHNAGFWLIDQLAREAGTTLRDERRFHGFYAKARLHGEEVHLLEP 75
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ V +F+K LP+ LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 76 QTYMNRSGQSVVAVASFFKILPD--QILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 133
Query: 121 K-CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 134 HLSSQQYWRLRIGIGHPRD 152
>gi|207091760|ref|ZP_03239547.1| peptidyl-tRNA hydrolase [Helicobacter pylori HPKX_438_AG0C1]
Length = 186
Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S A+ K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFAFSPKHNAYLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK L L++HDDLDL G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYKTKEL---LIVHDDLDLPLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GIGVIEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|76797994|ref|ZP_00780253.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae 18RS21]
gi|76586674|gb|EAO63173.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae 18RS21]
Length = 167
Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 85/156 (54%), Gaps = 3/156 (1%)
Query: 24 MCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLP 82
M +DRI K F AEI ++G + IKP TFMN SG ++ ++ +Y +
Sbjct: 1 MAVDRIVKDLDVNFTEDKNFKAEIGSDFINGEKIYFIKPTTFMNNSGIAVKALLTYYNIS 60
Query: 83 NLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-KNYKRLRIGIGRPPDTAH 141
+++ ++I+DDLD++ G +R + G GHNG+KSI G + + R+++GIGRP
Sbjct: 61 -IKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAHLGTQEFDRIKVGIGRPNGRMT 119
Query: 142 IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+I HVLG F + +L +D + ++ + D
Sbjct: 120 VINHVLGKFDKNDEIMILNTLDKVDNAVNYYLQTND 155
>gi|315585884|gb|ADU40265.1| aminoacyl-tRNA hydrolase [Helicobacter pylori 35A]
Length = 160
Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 87/156 (55%), Gaps = 11/156 (7%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D I + K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLISELDLSFTFSSKHNACLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK L L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYKTKEL---LIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
C +Y RLR+GI + ++ HVL F E
Sbjct: 114 LLCSNSYYRLRVGISKGMG---VVEHVLSKFHKNEE 146
>gi|85713256|ref|ZP_01044281.1| peptidyl-tRNA hydrolase [Idiomarina baltica OS145]
gi|85692925|gb|EAQ30898.1| peptidyl-tRNA hydrolase [Idiomarina baltica OS145]
Length = 196
Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 98/174 (56%), Gaps = 7/174 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY + RHN GF ++ R H K K + LR +L
Sbjct: 7 LLVGLGNPGPEYEKTRHNAGFWLVEAYCRRHGVTLTADTKTKALIGRHQTATRDLRIVL- 65
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK-SI 118
PQTFMN SG S+ + FYK+ E LV +D+LDLD G + K GGG GHNG+K +I
Sbjct: 66 -PQTFMNKSGYSIAAMARFYKIAP-EQILVAYDELDLDPGVAKFKRGGGAGGHNGIKDTI 123
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
++ +++ RLR+GIG P + + VLG S+PER L ID +R++ +L
Sbjct: 124 AQLGTQDFMRLRVGIGHPGHRSQVTGFVLGKPSAPERALLDECIDEASRAIDIL 177
>gi|187608018|ref|NP_001119866.1| hypothetical protein LOC559192 [Danio rerio]
gi|122890585|emb|CAM14093.1| novel protein similar to human and mouse peptidyl-tRNA hydrolase 1
homolog (S. cerevisiae) (PTRH1; zgc:112961) [Danio
rerio]
Length = 266
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 7/164 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWK--KKFHAEISEGQLDGLRTILI 59
+V GLGNPG +RH++G + + P W+ +K E+ QL ++ +L+
Sbjct: 58 MVVGLGNPG--MTGSRHSVGMAVLTTLAERLGAPDGWRSDRKVSGEVVVTQLQDVQLVLL 115
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+P+ MN++G S+ + + Y L E+ L+IHD+LD G +K GG GHNG++S
Sbjct: 116 RPKLLMNVNGVSVAKAASRY-LIQPEHILLIHDELDKPLGKFGIKHGGSARGHNGVRSCV 174
Query: 120 EKCGKNY-KRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
+ + RLRIGIGRP D I R+VLG FS E+ L +I
Sbjct: 175 DCLQTDVMPRLRIGIGRPSDKTPIDRYVLGRFSKEEQNVLDSVI 218
>gi|320538907|ref|ZP_08038583.1| peptidyl-tRNA hydrolase [Serratia symbiotica str. Tucson]
gi|320031067|gb|EFW13070.1| peptidyl-tRNA hydrolase [Serratia symbiotica str. Tucson]
Length = 201
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 97/175 (55%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + +H + KF + L G L+ P
Sbjct: 6 LIVGLANPGMEYAQTRHNAGAWYVDLLAQRYHQQLKEENKFFGYTTRLNLAGNDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++L + NFY++ E LV HD+LDL G ++K GGG+ GHNGLK I K
Sbjct: 66 TTFMNLSGKAVLAMANFYRIEPDE-ILVAHDELDLPPGVAKIKLGGGNGGHNGLKDIQNK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLRIGIG P D + ++ VLG + E+ + ID +L K
Sbjct: 125 FGNNPNFYRLRIGIGHPGDKSKVVGFVLGKPPTSEQEMIDKAIDESLHCSEMLMK 179
>gi|320104415|ref|YP_004180006.1| peptidyl-tRNA hydrolase [Isosphaera pallida ATCC 43644]
gi|319751697|gb|ADV63457.1| peptidyl-tRNA hydrolase [Isosphaera pallida ATCC 43644]
Length = 217
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 84/133 (63%), Gaps = 2/133 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+V GLGNPG +Y RHN+GF +DR+ + +KF +I++ +D R +L+KP+
Sbjct: 6 LVVGLGNPGSKYEGTRHNVGFDVVDRLAQGGMGARFVRKFDGQIADTLIDHHRVLLLKPE 65
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S+ +V FY+L + LV+ DDL L G LRL+ GGGD G GL+ I
Sbjct: 66 TFMNLSGRSVGQVARFYQL-EPSDVLVVCDDLSLPLGRLRLRPGGGDGGQKGLRDIIAHL 124
Query: 123 G-KNYKRLRIGIG 134
G + RLR+GIG
Sbjct: 125 GTSDVPRLRLGIG 137
>gi|145636338|ref|ZP_01792007.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittHH]
gi|145270503|gb|EDK10437.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittHH]
Length = 194
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+ + KF + + ++G L+ P
Sbjct: 6 LIVGLGNPGEKYADTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALASFYRI-KPEEILVIHDELDLPPGTAKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S +R L ++D + ++ K V
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRNALEKVLDEATDCVEMIFKDGMVK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|109948224|ref|YP_665452.1| peptidyl-tRNA hydrolase [Helicobacter acinonychis str. Sheeba]
gi|123066069|sp|Q17V73|PTH_HELAH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|109715445|emb|CAK00453.1| pth [Helicobacter acinonychis str. Sheeba]
Length = 186
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 103/194 (53%), Gaps = 19/194 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLR 55
M ++ GLGNP Y RHN+GF +D + SF F P K H I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNVGFDILDSLVSGLNLSFTFSP--KHNAHLCIYKD------ 52
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
IL+KPQT+MNLSG+S+L NFYK L L++HDDLDL G ++ K GGG+ GHNGL
Sbjct: 53 FILLKPQTYMNLSGESVLSTKNFYKPKEL---LIVHDDLDLPLGVVKFKNGGGNGGHNGL 109
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KSI C Y RLR+GI + + HVL F+ E + ++ +L +
Sbjct: 110 KSIDALCSNAYYRLRVGISKGTNAT---EHVLSKFNENEEPLKNAVFEHAKNALKFFIEC 166
Query: 176 EDVSFLNHIVSVRK 189
D + + + +++K
Sbjct: 167 NDFNAMCNHFTLKK 180
>gi|145630433|ref|ZP_01786214.1| peptidyl-tRNA hydrolase [Haemophilus influenzae R3021]
gi|145638695|ref|ZP_01794304.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittII]
gi|144984168|gb|EDJ91605.1| peptidyl-tRNA hydrolase [Haemophilus influenzae R3021]
gi|145272290|gb|EDK12198.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittII]
gi|309750188|gb|ADO80172.1| Peptidyl-tRNA hydrolase [Haemophilus influenzae R2866]
Length = 194
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 104/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+ + KF + L+G L+ P
Sbjct: 6 LIVGLGNPGEKYADTRHNAGEWLIERLARRFNVSLNPENKFFGKTVRTLLNGKEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S +R L ++D + ++ K V
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEMIFKDGMVK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|296125817|ref|YP_003633069.1| aminoacyl-tRNA hydrolase [Brachyspira murdochii DSM 12563]
gi|296017633|gb|ADG70870.1| Aminoacyl-tRNA hydrolase [Brachyspira murdochii DSM 12563]
Length = 196
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 92/179 (51%), Gaps = 12/179 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y +RHN+G+M +DR+ KK G+ + +L+K
Sbjct: 2 MKLVMGLGNPGEQYKNHRHNVGYMILDRVAKKLNVELDIKKKKTVFGRGKHGKMEYLLLK 61
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG--------- 111
P TFMNLSG++ L + +F K+ +EN +VI+DD + G R+ D
Sbjct: 62 PLTFMNLSGEAALYMASFMKI-TVENIIVIYDDTSVPIGEFRVIPSKTDDSEEDTEEYTI 120
Query: 112 -HNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
HNG+KSI E N+ ++ +GIG P+ +L FS ER + I D++ +
Sbjct: 121 DHNGIKSIRESLKSYNFTKIGVGIGACPENEEKADFLLAPFSKDERKKIKDISDSVVDA 179
>gi|33239733|ref|NP_874675.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|46576740|sp|Q7VDT7|PTH_PROMA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|33237258|gb|AAP99327.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 204
Score = 97.1 bits (240), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 107/197 (54%), Gaps = 15/197 (7%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++AGLGNPG +Y RHN+GFM ++R+ S F A KK I+ ++ + L+
Sbjct: 8 LLAGLGNPGSKYTSTRHNVGFMALERLAKKESVQF--AMNKKIFGHIANIEIGANKRKLL 65
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SG+S+ + ++ L + L+ DD+DL G LR + GGG GHNGLK I
Sbjct: 66 MPNTYMNESGRSISAAIKWFDL-EINQILIFVDDMDLPLGKLRFREGGGSGGHNGLKDII 124
Query: 120 EKCG-KNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
+ G +++ RLRIGIG P I HVLG F E + ++D + + L ++
Sbjct: 125 KHLGSQDFCRLRIGIGPPSINQGDRKQKTIPHVLGKFDQAESKVITKVLDKVIKGLEVIE 184
Query: 174 KR---EDVSFLNHIVSV 187
+ + SFLN ++
Sbjct: 185 QYGLVKGTSFLNSSLTA 201
>gi|223974357|gb|ACN31366.1| unknown [Zea mays]
Length = 166
Score = 97.1 bits (240), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN+GF ID I +F A + +G++ +L KP
Sbjct: 53 WLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDASIMLAKP 112
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
QTFMN SG+S+ ++++++K+P L +V++DDLDL F LRL GG GHNG
Sbjct: 113 QTFMNASGESVGQLVSYFKIP-LSQVVVMYDDLDLPFAKLRLLPKGGHGGHNG 164
>gi|203284681|ref|YP_002222421.1| peptidyl-tRNA hydrolase [Borrelia duttonii Ly]
gi|226694247|sp|B5RMX9|PTH_BORDL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|201084124|gb|ACH93715.1| peptidyl-tRNA hydrolase [Borrelia duttonii Ly]
Length = 188
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 86/153 (56%), Gaps = 4/153 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG + RHN+GF ID++ + K K + E ++ +D R +LIKP
Sbjct: 4 LIVGLGNPGSNFLHTRHNVGFGLIDKLVMKNALSLRKAK-NYEYADFNIDSRRIVLIKPL 62
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG V + + + + N LV+ D++DL G RL+ GG + HNGL+SISE
Sbjct: 63 TYMNLSGNIFPFVFSKFYMK-INNLLVVVDNVDLPLGKCRLRKVGGASTHNGLRSISESL 121
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G Y RL IG+G A + VL F+ E
Sbjct: 122 GSTKYGRLYIGVGNNSAFA-LKDFVLSKFNDSE 153
>gi|108803739|ref|YP_643676.1| peptidyl-tRNA hydrolase [Rubrobacter xylanophilus DSM 9941]
gi|119390999|sp|Q1AXL4|PTH_RUBXD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|108764982|gb|ABG03864.1| peptidyl-tRNA hydrolase [Rubrobacter xylanophilus DSM 9941]
Length = 172
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 90/160 (56%), Gaps = 8/160 (5%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFM 65
GLGNPG Y RHN G M +D + H + + ++G +L+KP TFM
Sbjct: 2 GLGNPGRRYALTRHNAGHMVLDELFRRHGGRWRRARRAEAAEV-SVEGREAVLLKPATFM 60
Query: 66 NLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN 125
N SG++L + Y+ E+ +V+HDDLDL GT+R+K GGG GHNGL+S+ + G
Sbjct: 61 NESGEAL----SGYRA---EDLIVVHDDLDLPAGTVRVKVGGGAGGHNGLRSVISRVGNG 113
Query: 126 YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
+ R+R+GIGRPP+ A + +VLG R + D +
Sbjct: 114 FVRVRVGIGRPPEGADVTGYVLGRMDRAAREAIPRAADAV 153
>gi|145640350|ref|ZP_01795934.1| peptidyl-tRNA hydrolase [Haemophilus influenzae R3021]
gi|145274936|gb|EDK14798.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 22.4-21]
Length = 194
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+ + KF + + ++G L+ P
Sbjct: 6 LIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALASFYRI-KPEEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S +R L ++D + ++ K V
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEMIFKDGMVK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|270594841|ref|ZP_06221504.1| aminoacyl-tRNA hydrolase [Haemophilus influenzae HK1212]
gi|270318345|gb|EFA29501.1| aminoacyl-tRNA hydrolase [Haemophilus influenzae HK1212]
Length = 212
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+ + KF + + ++G L+ P
Sbjct: 24 LIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLVP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I +
Sbjct: 84 TTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVAQ 142
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S +R L ++D + ++ K V
Sbjct: 143 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRNALEKVLDEATDCVEMIFKDGMVK 202
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 203 ATNRLNSFK 211
>gi|145632641|ref|ZP_01788375.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 3655]
gi|144986836|gb|EDJ93388.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 3655]
gi|309972447|gb|ADO95648.1| Peptidyl-tRNA hydrolase [Haemophilus influenzae R2846]
Length = 194
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+ + KF + + ++G L+ P
Sbjct: 6 LIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LVIHD+LDL G +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALANFYRIKP-EEILVIHDELDLPAGIAKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S +R L ++D + ++ K V
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRNALEKVLDEATDCVEMIFKDGMVK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|256545181|ref|ZP_05472547.1| aminoacyl-tRNA hydrolase [Anaerococcus vaginalis ATCC 51170]
gi|256399222|gb|EEU12833.1| aminoacyl-tRNA hydrolase [Anaerococcus vaginalis ATCC 51170]
Length = 194
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+ + GLGNPG +Y RHN GF+ ID + + K KF + I +G + G + +L+K
Sbjct: 1 MYYIVGLGNPGIQYENTRHNAGFITIDYLARKYSIDVRKIKFKSLIGQGVISGQKVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDL-------DLDFGTLRLKTGGGDAGHN 113
PQT+MN SG+++ E+ ++ HD L D+DFG++R++ G HN
Sbjct: 61 PQTYMNNSGEAIREIYKYFDFD--------HDKLIVIYDDIDIDFGSIRIRKKGSAGTHN 112
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G+KSI ++ R+++ +G+ P + VL FS E
Sbjct: 113 GMKSIIYNLEFDDFPRIKVAVGKKPSYMDLANFVLSGFSKQE 154
>gi|109898885|ref|YP_662140.1| peptidyl-tRNA hydrolase [Pseudoalteromonas atlantica T6c]
gi|119390980|sp|Q15SQ2|PTH_PSEA6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|109701166|gb|ABG41086.1| peptidyl-tRNA hydrolase [Pseudoalteromonas atlantica T6c]
Length = 194
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 5/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G ++ + H + + KF + G L+ P
Sbjct: 6 LIVGLGNPGLEYKYTRHNAGTWLVENLARMHNCTLSLQSKFFGYTGRVTIGGQDIRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++P E+ LV +D+LDL G + K GG + NG++ I
Sbjct: 66 TTYMNKSGQAVAALAGFYRIPP-ESILVAYDELDLPPGIAKFKLGGSSS-QNGIRDIVSS 123
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLR+GIG P + +VLG + E+ + ID R + +L K +
Sbjct: 124 LGNNKDFYRLRVGIGHPGHKGKVSGYVLGKAPAKEQEQMDAAIDEGVRCIEILIKDDMKK 183
Query: 180 FLNHIVSVR 188
+N + S +
Sbjct: 184 AMNRLHSFK 192
>gi|160947368|ref|ZP_02094535.1| hypothetical protein PEPMIC_01302 [Parvimonas micra ATCC 33270]
gi|158446502|gb|EDP23497.1| hypothetical protein PEPMIC_01302 [Parvimonas micra ATCC 33270]
Length = 195
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 94/158 (59%), Gaps = 2/158 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG Y RHN+G+ ID + + K+KF + + + G + I +KP
Sbjct: 6 FLIVGLGNPGKNYIGTRHNVGYGVIDILAEKYSINMKKEKFKSFYGQINMFGKKCIFLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++++ +N++K+ EN +V+ DD+D+ FGT+R+K G HNGL+SI
Sbjct: 66 LTYMNLSGEAVIDAVNYFKI-KPENIIVVVDDIDIPFGTVRIKKKGSAGTHNGLRSIIYH 124
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+N+ R++I +G+ PD + VL F E L
Sbjct: 125 LETENFPRVKISVGKCPDYMDLKDFVLSKFLPSEEKIL 162
>gi|170701089|ref|ZP_02892065.1| Aminoacyl-tRNA hydrolase [Burkholderia ambifaria IOP40-10]
gi|170133990|gb|EDT02342.1| Aminoacyl-tRNA hydrolase [Burkholderia ambifaria IOP40-10]
Length = 199
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 88/139 (63%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLIDQLAREAGATLRDERRFHGFYAKARLHGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ + +F+K LP+ LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 64 QTYMNRSGQSVVALASFFKILPD--QILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 121
Query: 121 K-CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 122 HLSSQQYWRLRIGIGHPRD 140
>gi|288926806|ref|ZP_06420715.1| aminoacyl-tRNA hydrolase [Prevotella buccae D17]
gi|288336435|gb|EFC74812.1| aminoacyl-tRNA hydrolase [Prevotella buccae D17]
Length = 190
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 88/163 (53%), Gaps = 2/163 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GFM +D ++ K + ++E + G + L+KP
Sbjct: 4 YLICGLGNPGDEYAGTRHNTGFMVLDAFAKASNI-CFEDKRYGFVAETSIKGRKVFLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + LV+ DD+ L G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENIDE-SRLLVVSDDVALPLGAFRLKGSGSNGGHNGLGHIQQM 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G +Y RLR+G+G I VLG++S E+ L P +D
Sbjct: 122 IGSDYARLRMGVGNDYPRGGQIDWVLGHYSEDEKKELQPAVDT 164
>gi|167585420|ref|ZP_02377808.1| peptidyl-tRNA hydrolase [Burkholderia ubonensis Bu]
Length = 200
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 109/187 (58%), Gaps = 15/187 (8%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLIDQLAREAGATLRDERRFHGFYAKARLHGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ + F+K LP+ LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 64 QTYMNRSGQSVVALAQFFKILPD--QILVAHDELDLPPGTVKLKRGGGSGGHNGLKDISA 121
Query: 121 K-CGKNYKRLRIGIGRP----PDTAHI-IRHVLGNFS-SPERYFLLPIID-NIARSL--- 169
+ Y RLRIGIG P P++A + + NF P R +ID +I R+L
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRREEQDVIDASIERALAVM 181
Query: 170 PLLAKRE 176
P++ K E
Sbjct: 182 PMIVKGE 188
>gi|301169096|emb|CBW28693.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 10810]
Length = 194
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+ + KF + + ++G L+ P
Sbjct: 6 LIVGLGNPGEKYADTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALASFYRI-KPEEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S +R L ++D + ++ K +
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRNALENVLDEATDCVEMIFKDGMIK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|302345748|ref|YP_003814101.1| aminoacyl-tRNA hydrolase [Prevotella melaninogenica ATCC 25845]
gi|302149840|gb|ADK96102.1| aminoacyl-tRNA hydrolase [Prevotella melaninogenica ATCC 25845]
Length = 190
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 5/173 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG+EY RHN GFM +D ++ K + ++E + G + IL+KP
Sbjct: 4 YLICGLGNPGYEYEGTRHNTGFMVLDAFAKASNI-VFEDKRYGFVAETTVKGRKIILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + LV+ DD+ L G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENIDQ-SRLLVVSDDVALPLGAFRLKGNGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID---NIARSLPL 171
G+NY RLR+G+G + VLG +S E L P ID +I +S L
Sbjct: 122 IGQNYARLRMGVGNDYPRGGQVDWVLGRYSDEEMKELQPAIDLGVDIIKSFAL 174
>gi|108563841|ref|YP_628157.1| peptidyl-tRNA hydrolase [Helicobacter pylori HPAG1]
gi|119390949|sp|Q1CRD9|PTH_HELPH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|107837614|gb|ABF85483.1| peptidyl-tRNA hydrolase [Helicobacter pylori HPAG1]
Length = 186
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLR 55
M ++ GLGNP Y RHN GF +D + SF F P K +A + +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSP----KHNACLCVYK----D 52
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
IL+KPQT+MNLSG+S+L NFYK L L++HDDLDL G +R K GGG+ GHNGL
Sbjct: 53 FILLKPQTYMNLSGESVLSTKNFYKPKEL---LIVHDDLDLPLGVVRFKNGGGNGGHNGL 109
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KSI C +Y RLR+GI + +I HVL F E + ++ +L +
Sbjct: 110 KSIDLLCSNSYYRLRVGISK---GIGVIEHVLSKFHKNEEPLKNAVFEHAKNALKFFIES 166
Query: 176 EDVSFLNHIVSVRK 189
D + + + +++K
Sbjct: 167 HDFNAMQNRFTLKK 180
>gi|119608092|gb|EAW87686.1| peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae), isoform CRA_b
[Homo sapiens]
Length = 227
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFH--AEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W + H A+++ L + +L
Sbjct: 44 WMVAGLGNPG--LPGTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 101
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS- 117
++P+ MN +G+S+ + L E YLV HD+LD G L LK GG GHNG++S
Sbjct: 102 LRPRRLMNANGRSVARAAELFGLTAEEVYLV-HDELDKPLGRLALKLGGSARGHNGVRSC 160
Query: 118 ISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
IS RLR+GIGRP + HVLG FS E+ LPLL R
Sbjct: 161 ISCLNSNAMPRLRVGIGRPAHPEAVQAHVLGCFSPAEQEL-----------LPLLLDRAT 209
Query: 178 VSFLNHI 184
L+HI
Sbjct: 210 DLILDHI 216
>gi|68248997|ref|YP_248109.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 86-028NP]
gi|81336591|sp|Q4QNE8|PTH_HAEI8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68057196|gb|AAX87449.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 86-028NP]
Length = 194
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+ + KF + + ++G L+ P
Sbjct: 6 LIVGLGNPGEKYADTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALASFYRI-KPEEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S +R L ++D + ++ K +
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEIIFKDGMIK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|42526159|ref|NP_971257.1| peptidyl-tRNA hydrolase [Treponema denticola ATCC 35405]
gi|68052976|sp|Q73Q01|PTH_TREDE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|41816271|gb|AAS11138.1| peptidyl-tRNA hydrolase [Treponema denticola ATCC 35405]
Length = 203
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 13/163 (7%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKF---HAEISEGQLDGLRTILI 59
++ LGN G +Y RHN ++ D I W+ KF +A++ G L+
Sbjct: 4 LIVFLGNYGKKYENTRHNAAWVLCDSIE-IGSNAVWQSKFKGQYAKLPSSMTPGRAVHLL 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+T+MNLSG+S++ +F++L EN L++HD+L+L G L K GG GHNGL+SI
Sbjct: 63 KPETYMNLSGESVIAAASFFRL-KPENILIVHDELELKPGILSFKWSGGLGGHNGLRSIK 121
Query: 120 EKCG-KNYKRLRIGIGRPPDTAH-------IIRHVLGNFSSPE 154
++ RLRIGIGRP ++ I +VL F+ E
Sbjct: 122 SVLNTADFFRLRIGIGRPDFSSQGGDASPDISGYVLSRFAQSE 164
>gi|315608436|ref|ZP_07883424.1| aminoacyl-tRNA hydrolase [Prevotella buccae ATCC 33574]
gi|315249896|gb|EFU29897.1| aminoacyl-tRNA hydrolase [Prevotella buccae ATCC 33574]
Length = 190
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 88/163 (53%), Gaps = 2/163 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GFM +D ++ K + ++E + G + L+KP
Sbjct: 4 YLICGLGNPGDEYAGTRHNTGFMVLDAFAKASNI-CFEDKRYGFVAETSIKGRKVFLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + LV+ DD+ L G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENIDE-SRLLVVSDDVALPLGAFRLKGSGSNGGHNGLGHIQQM 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G +Y RLR+G+G I VLG++S E+ L P ID
Sbjct: 122 IGPDYARLRMGVGNDYPRGGQIDWVLGHYSEDEKKELQPAIDT 164
>gi|146293947|ref|YP_001184371.1| peptidyl-tRNA hydrolase [Shewanella putrefaciens CN-32]
gi|166229453|sp|A4Y9D9|PTH_SHEPC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145565637|gb|ABP76572.1| peptidyl-tRNA hydrolase [Shewanella putrefaciens CN-32]
Length = 195
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 98/191 (51%), Gaps = 8/191 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG EY + RHN G + RI P K+ + L G L+
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVQELARICGVTLVP--DSKYFGLTARAVLQGKDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSG+++ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 64 IPTTYMNLSGKAVGALANFFRI-TPEEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDII 122
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
K KN+ RLRIGIG P D + +VLG + E+ + ID RS +L K
Sbjct: 123 AKLANDKNFYRLRIGIGHPGDKNQVSGYVLGKAPAKEQELIEAAIDEAVRSTEILYKENM 182
Query: 178 VSFLNHIVSVR 188
V + + S +
Sbjct: 183 VKAMTRLHSFK 193
>gi|221091196|ref|XP_002156830.1| PREDICTED: similar to predicted protein, partial [Hydra
magnipapillata]
Length = 712
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 93/167 (55%), Gaps = 18/167 (10%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT--ILIKP 61
+ GLGN + Y +RH+IG D+I S + +WK F + QL + I++K
Sbjct: 518 IVGLGN--YIYPNSRHSIGMSICDKIAS-QYNLSWKYSFDYKAYTTQLSNITNDIIMLKS 574
Query: 62 QTFMNLSGQSL------LEVMNFY------KLPNLENYLVIHDDLDLDFGTLRLKTGGGD 109
+ MN++G+S+ LEV F+ K +EN +V+HDDLD G L LKT G
Sbjct: 575 KYPMNMNGKSVKAIVKGLEVECFFSFFILVKGLEVENIIVVHDDLDRPLGKLSLKTCGSA 634
Query: 110 AGHNGLKSISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
GHNG+KSI G + ++RLRIGIGRP + + R+VL +F E+
Sbjct: 635 GGHNGVKSIISCLGTDKFRRLRIGIGRPINPNEVTRYVLADFDVSEK 681
>gi|317014912|gb|ADU82348.1| peptidyl-tRNA hydrolase [Helicobacter pylori Gambia94/24]
Length = 186
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 103/190 (54%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSSKHNAYLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK L L++HDDLDL G ++ K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYKPKEL---LIVHDDLDLPLGVVKFKKGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F + E + ++ +L + D +
Sbjct: 114 ALCSNSYYRLRVGISK---GFNITEHVLSKFHNNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|297271264|ref|XP_001095651.2| PREDICTED: probable peptidyl-tRNA hydrolase-like isoform 2 [Macaca
mulatta]
Length = 228
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 93/187 (49%), Gaps = 18/187 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFH--AEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W + H A+++ L + +L
Sbjct: 45 WMVAGLGNPG--LPGTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 102
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN +G+S+ + L E YLV HD+LD G L LK GG GHNG++S
Sbjct: 103 LRPRRLMNANGRSVARAAELFGLTAEEVYLV-HDELDKPLGRLALKLGGSARGHNGVRSC 161
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
N RLR+GIGRP + HVLG FS E+ LPLL R
Sbjct: 162 ISCLNSNAMPRLRVGIGRPTHPEAVQAHVLGCFSPAEQEL-----------LPLLLDRAT 210
Query: 178 VSFLNHI 184
L+HI
Sbjct: 211 DLILDHI 217
>gi|207742238|ref|YP_002258630.1| peptidyl-trna hydrolase (pth) protein [Ralstonia solanacearum
IPO1609]
gi|206593626|emb|CAQ60553.1| peptidyl-trna hydrolase (pth) protein [Ralstonia solanacearum
IPO1609]
Length = 200
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 98/179 (54%), Gaps = 10/179 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ H + +FH + L G L++P
Sbjct: 4 LIVGLGNPGAEYAATRHNAGFWLVDQLARMGHVTLRNETRFHGYAARATLWGHDVWLLQP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-SE 120
QTFMN SG + + + FYK+P + LV HD+LDL G ++LK GGG GHNGLK I +
Sbjct: 64 QTFMNRSGLATVALARFYKIPP-DEILVAHDELDLPPGAVKLKLGGGSGGHNGLKDIGAH 122
Query: 121 KCGKNYKRLRIGIGR-----PPDTAHIIRHVLGNF--SSPERYFLLPIIDNIARSLPLL 172
+ + RLR+GIG PP TA +H + NF +P R I I RSL L
Sbjct: 123 LTTQQFWRLRLGIGHPRNLLPPGTAPSGQHDVANFVLKAPRREEQELIDRAIDRSLDAL 181
>gi|120597881|ref|YP_962455.1| peptidyl-tRNA hydrolase [Shewanella sp. W3-18-1]
gi|120557974|gb|ABM23901.1| peptidyl-tRNA hydrolase [Shewanella sp. W3-18-1]
gi|319427324|gb|ADV55398.1| peptidyl-tRNA hydrolase [Shewanella putrefaciens 200]
Length = 208
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 98/191 (51%), Gaps = 8/191 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG EY + RHN G + RI P K+ + L G L+
Sbjct: 19 LIVGLANPGAEYAQTRHNAGAWYVQELARICGVTLVP--DSKYFGLTARAVLQGKDVRLL 76
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSG+++ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 77 IPTTYMNLSGKAVGALANFFRI-TPEEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDII 135
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
K KN+ RLRIGIG P D + +VLG + E+ + ID RS +L K
Sbjct: 136 AKLANDKNFYRLRIGIGHPGDKNQVSGYVLGKAPAKEQELIEAAIDEAVRSTEILYKENM 195
Query: 178 VSFLNHIVSVR 188
V + + S +
Sbjct: 196 VKAMTRLHSFK 206
>gi|50897284|ref|NP_001002913.1| probable peptidyl-tRNA hydrolase [Homo sapiens]
gi|114626791|ref|XP_520273.2| PREDICTED: peptidyl-tRNA hydrolase 1 homolog isoform 4 [Pan
troglodytes]
gi|74750555|sp|Q86Y79|PTH_HUMAN RecName: Full=Probable peptidyl-tRNA hydrolase; Short=PTH
gi|28422548|gb|AAH47012.1| Peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) [Homo sapiens]
gi|313882314|gb|ADR82643.1| peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) [synthetic
construct]
Length = 214
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFH--AEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W + H A+++ L + +L
Sbjct: 31 WMVAGLGNPG--LPGTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 88
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS- 117
++P+ MN +G+S+ + L E YLV HD+LD G L LK GG GHNG++S
Sbjct: 89 LRPRRLMNANGRSVARAAELFGLTAEEVYLV-HDELDKPLGRLALKLGGSARGHNGVRSC 147
Query: 118 ISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
IS RLR+GIGRP + HVLG FS E+ LPLL R
Sbjct: 148 ISCLNSNAMPRLRVGIGRPAHPEAVQAHVLGCFSPAEQEL-----------LPLLLDRAT 196
Query: 178 VSFLNHI 184
L+HI
Sbjct: 197 DLILDHI 203
>gi|83746830|ref|ZP_00943877.1| Peptidyl-tRNA hydrolase [Ralstonia solanacearum UW551]
gi|83726415|gb|EAP73546.1| Peptidyl-tRNA hydrolase [Ralstonia solanacearum UW551]
Length = 217
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 98/179 (54%), Gaps = 10/179 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ H + +FH + L G L++P
Sbjct: 21 LIVGLGNPGAEYAATRHNAGFWLVDQLARMGHVTLRNETRFHGYAARATLWGHDVWLLQP 80
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-SE 120
QTFMN SG + + + FYK+P + LV HD+LDL G ++LK GGG GHNGLK I +
Sbjct: 81 QTFMNRSGLATVALARFYKIPP-DEILVAHDELDLPPGAVKLKLGGGSGGHNGLKDIGAH 139
Query: 121 KCGKNYKRLRIGIGR-----PPDTAHIIRHVLGNF--SSPERYFLLPIIDNIARSLPLL 172
+ + RLR+GIG PP TA +H + NF +P R I I RSL L
Sbjct: 140 LTTQQFWRLRLGIGHPRNLLPPGTAPSGQHDVANFVLKAPRREEQELIDRAIDRSLDAL 198
>gi|304373320|ref|YP_003856529.1| Peptidyl-tRNA hydrolase [Mycoplasma hyorhinis HUB-1]
gi|304309511|gb|ADM21991.1| Peptidyl-tRNA hydrolase [Mycoplasma hyorhinis HUB-1]
gi|330723803|gb|AEC46173.1| peptidyl-tRNA hydrolase [Mycoplasma hyorhinis MCLD]
Length = 191
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 96/171 (56%), Gaps = 11/171 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT-ILI 59
M ++ GLGNPG +Y +HN+GF ID++ + K F S G + + IL
Sbjct: 1 MKLIVGLGNPGPQYELTKHNVGFRVIDKLAQ-----SLKTDFINWRSIGLIIKTQDYILA 55
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG + E++ FYK+ N+++ L+++DD+D + G ++T G AGHNGLK I
Sbjct: 56 KPLTYMNQSGLLVSELVKFYKI-NIDDILIVYDDMDFNVGQAIMRTNGSSAGHNGLKDIF 114
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ KRL+IGI R ++ + +VL F + + +ID+ A L
Sbjct: 115 RMLQTQEIKRLKIGISRDKNSKN---YVLTPFDPIQEAIIKKVIDDCADIL 162
>gi|71278842|ref|YP_270233.1| peptidyl-tRNA hydrolase [Colwellia psychrerythraea 34H]
gi|119390929|sp|Q47Y87|PTH_COLP3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71144582|gb|AAZ25055.1| peptidyl-tRNA hydrolase [Colwellia psychrerythraea 34H]
Length = 194
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 101/177 (57%), Gaps = 8/177 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++AGLGNPG EY + RHN G ++ R H+ P +KK+ +G + G L+
Sbjct: 5 LIAGLGNPGPEYSKTRHNAGVWFVEELARSHNISLRP--EKKYSGLYGKGLIAGNLVHLL 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMN SGQ++ + NFYK+ +++ LV HD+LD+ G ++K GGG GHNGL+ I
Sbjct: 63 IPTTFMNRSGQAVAPLANFYKI-SVDEILVAHDELDMLPGVCKIKKGGGHGGHNGLRDII 121
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
++ K++ RLRIGI P + HVLG S E+ + ID +R L + K
Sbjct: 122 DRMANNKDFYRLRIGIDHPGHRDKVTGHVLGKAPSAEQAKIEQAIDEASRCLDIWLK 178
>gi|330818354|ref|YP_004362059.1| Peptidyl-tRNA hydrolase [Burkholderia gladioli BSR3]
gi|327370747|gb|AEA62103.1| Peptidyl-tRNA hydrolase [Burkholderia gladioli BSR3]
Length = 201
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 105/180 (58%), Gaps = 12/180 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGHYAKARLYGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ V F+K LP+ LV HD+LDL G+++LK GGG GHNGLK IS
Sbjct: 64 QTYMNRSGQSVVAVAQFFKILPD--EILVAHDELDLPPGSVKLKLGGGSGGHNGLKDISA 121
Query: 121 K-CGKNYKRLRIGIGRP----PDTAHI-IRHVLGNFS-SPERYFLLPIID-NIARSLPLL 172
+ Y RLRIGIG P P+ A + + NF P R +ID +I RSL ++
Sbjct: 122 HLSSQQYWRLRIGIGHPRELIPEGARAGAKPDVANFVLKPPRREEQEVIDASIERSLAVM 181
>gi|329122269|ref|ZP_08250857.1| aminoacyl-tRNA hydrolase [Haemophilus aegyptius ATCC 11116]
gi|327473830|gb|EGF19247.1| aminoacyl-tRNA hydrolase [Haemophilus aegyptius ATCC 11116]
Length = 194
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+ + KF + + ++G L+ P
Sbjct: 6 LIVGLGNPGEKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALASFYRI-KPEEILVIHDELDLPPGTAKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S +R L ++D + ++ K +
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRNALEKVLDEATDCVEMIFKDGMIK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|260582342|ref|ZP_05850135.1| peptidyl-tRNA hydrolase [Haemophilus influenzae NT127]
gi|260094710|gb|EEW78605.1| peptidyl-tRNA hydrolase [Haemophilus influenzae NT127]
Length = 194
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 104/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+ + KF + + ++G L+ P
Sbjct: 6 LIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LVIHD+LDL G +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALANFYRIKP-EEILVIHDELDLPAGIAKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S +R L ++D + ++ K +
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRNALEKVLDEATDCVEMIFKDGMIK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|89256305|ref|YP_513667.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
LVS]
gi|115314752|ref|YP_763475.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
OSU18]
gi|167010180|ref|ZP_02275111.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
FSC200]
gi|169656592|ref|YP_001428439.2| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|254367638|ref|ZP_04983659.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
257]
gi|254369284|ref|ZP_04985296.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
FSC022]
gi|290953139|ref|ZP_06557760.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
URFT1]
gi|295313667|ref|ZP_06804251.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
URFT1]
gi|119390943|sp|Q2A3N5|PTH_FRATH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390944|sp|Q0BM46|PTH_FRATO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038313|sp|A7NBY0|PTH_FRATF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|89144136|emb|CAJ79395.1| Peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
LVS]
gi|115129651|gb|ABI82838.1| aminoacyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
OSU18]
gi|134253449|gb|EBA52543.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
257]
gi|157122234|gb|EDO66374.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
FSC022]
gi|164551660|gb|ABU61483.2| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 191
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 99/168 (58%), Gaps = 11/168 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLRTI 57
++ GLGN G EY + RHN+G I +I SF + K + +++ +D +
Sbjct: 6 MIVGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSF----SSNTKLNCNLAKVSIDYNNVV 61
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+ P T+MN SG ++ +V NFYK+ E LV HD+LD+D G +RLK GGG GHNGL+S
Sbjct: 62 LVFPTTYMNNSGLAVSKVANFYKIAPAE-ILVAHDELDIDSGEIRLKKGGGHGGHNGLRS 120
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
I++ G N Y RLRIGIG P + + +VL N S ++ + IDN
Sbjct: 121 INQHLGTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDN 168
>gi|115352915|ref|YP_774754.1| peptidyl-tRNA hydrolase [Burkholderia ambifaria AMMD]
gi|171320166|ref|ZP_02909228.1| Aminoacyl-tRNA hydrolase [Burkholderia ambifaria MEX-5]
gi|172061763|ref|YP_001809415.1| peptidyl-tRNA hydrolase [Burkholderia ambifaria MC40-6]
gi|122322182|sp|Q0BBQ3|PTH_BURCM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238689134|sp|B1YN54|PTH_BURA4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|115282903|gb|ABI88420.1| peptidyl-tRNA hydrolase [Burkholderia ambifaria AMMD]
gi|171094580|gb|EDT39632.1| Aminoacyl-tRNA hydrolase [Burkholderia ambifaria MEX-5]
gi|171994280|gb|ACB65199.1| Aminoacyl-tRNA hydrolase [Burkholderia ambifaria MC40-6]
Length = 199
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 88/139 (63%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLHGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ + +F+K LP+ LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 64 QTYMNRSGQSVVALASFFKILPD--QILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 121
Query: 121 K-CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 122 HLSSQQYWRLRIGIGHPRD 140
>gi|326433418|gb|EGD78988.1| peptidyl-tRNA hydrolase [Salpingoeca sp. ATCC 50818]
Length = 387
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 27/202 (13%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTIL 58
+ + GLGNPG Y RHN+GFM +D + + W K K A + G++ +
Sbjct: 169 VMVWVGLGNPGSAYKHTRHNLGFMALDAVAAAKSL-TWTKDRKCKAMTCSFETGGVKVHM 227
Query: 59 IKPQTFMNLSGQSLLEVMNFYK-LPNLEN----------------YLVIHDDLDLDFGTL 101
+KP T+MNLSG ++ + + K L N E L + DDLD G +
Sbjct: 228 LKPLTYMNLSGDAVRSFLRYAKPLANAETAQSKTGGGGSAAAARCVLAVCDDLDQPLGRM 287
Query: 102 RLKTGGGDAGHNGLKSISEK-CGKNYKRLRIGI----GRPPDTAHIIRH-VLGNFSSPER 155
+LK G GHNGL+SI ++ + Y RLR+GI GR ++ VL +F+S E+
Sbjct: 288 KLKLKGSAGGHNGLRSIEQRLASQEYMRLRLGIGPMAGRTTTAKRAVQDFVLTHFASDEQ 347
Query: 156 YFLLPIIDNIARSLPLLAKRED 177
L ++ + AR LL RE+
Sbjct: 348 DALERVVAH-ARDALLLLTREN 368
>gi|282858159|ref|ZP_06267354.1| aminoacyl-tRNA hydrolase [Pyramidobacter piscolens W5455]
gi|282584081|gb|EFB89454.1| aminoacyl-tRNA hydrolase [Pyramidobacter piscolens W5455]
Length = 197
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 3/157 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFH-AEISEGQLDGLRTILI 59
M ++AGLGNPG +Y RHN+G+ ID + + KF A + G R + +
Sbjct: 1 MRLIAGLGNPGTDYALTRHNVGWEVIDCLANRLQAGEPSTKFGGACWGPLNIGGERVVFL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG ++ E+ FYK+ + LV+ DD++L G +R+++ G GHNGLKS+
Sbjct: 61 KPYTYMNNSGIAVGEIARFYKI-EPRDILVVVDDINLPLGRMRIRSKGSAGGHNGLKSVI 119
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G ++ RLR+G+ P + V G+FS+ +R
Sbjct: 120 AHLGSADFPRLRVGVDPCPPHYDMAAWVTGHFSADDR 156
>gi|270261421|ref|ZP_06189694.1| peptidyl-tRNA hydrolase [Serratia odorifera 4Rx13]
gi|270044905|gb|EFA17996.1| peptidyl-tRNA hydrolase [Serratia odorifera 4Rx13]
Length = 196
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 96/173 (55%), Gaps = 4/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLAQRHNQQLKEESKFFGYTARLNLAGNDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++L + +FY++ + LV HD+LD+ G ++K GGG+ GHNGLK I K
Sbjct: 66 TTFMNLSGKAVLAMASFYRI-EPDEILVAHDELDIPPGVAKIKLGGGNGGHNGLKDIQNK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G N+ RLRIGIG P D ++ VLG + E+ + ID AR +L
Sbjct: 125 FGNNPNFYRLRIGIGHPGDKNKVVGFVLGKPPASEQKMIDEAIDEAARCTEVL 177
>gi|148827596|ref|YP_001292349.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittGG]
gi|166199334|sp|A5UGR0|PTH_HAEIG RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148718838|gb|ABQ99965.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittGG]
Length = 194
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 104/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+ + KF + ++G L+ P
Sbjct: 6 LIVGLGNPGEKYADTRHNAGEWLIERLARRFNVSLNPESKFFGKTVRTLVNGKEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALASFYRI-KPEEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S +R L ++D + ++ K +
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRNALEKVLDEATDCVEMIFKDGMIK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|296101951|ref|YP_003612097.1| peptidyl-tRNA hydrolase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295056410|gb|ADF61148.1| peptidyl-tRNA hydrolase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 194
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF+ S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFYGYTSRINLAGADVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMATFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLR+GIG P D ++ VLG E+ + +D AR
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAVDEAAR 171
>gi|282853610|ref|ZP_06262947.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes J139]
gi|282583063|gb|EFB88443.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes J139]
gi|315092573|gb|EFT64549.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA4]
gi|315104559|gb|EFT76535.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL050PA2]
Length = 200
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 15/149 (10%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFH--------AEISEGQ 50
++V GLGNPG Y RHN+G I R PA ++ A +
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 51 LDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
+D IL++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LRLK GGGD
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGM-TPDHLIVVHDEIDLDPGRLRLKKGGGDN 123
Query: 111 GHNGLKSISE--KCGKNYKRLRIGIGRPP 137
GHNGLKS+ + G ++ R+R+G+GRPP
Sbjct: 124 GHNGLKSVRAHMRTG-DFIRVRVGVGRPP 151
>gi|221199982|ref|ZP_03573025.1| peptidyl-tRNA hydrolase [Burkholderia multivorans CGD2M]
gi|221206863|ref|ZP_03579875.1| peptidyl-tRNA hydrolase [Burkholderia multivorans CGD2]
gi|221173518|gb|EEE05953.1| peptidyl-tRNA hydrolase [Burkholderia multivorans CGD2]
gi|221180221|gb|EEE12625.1| peptidyl-tRNA hydrolase [Burkholderia multivorans CGD2M]
Length = 199
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 109/187 (58%), Gaps = 15/187 (8%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLIDQLAREAGATLRDERRFHGFYAKARLYGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ + +F+K LP+ LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 64 QTYMNRSGQSVVALAHFFKILPD--QILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 121
Query: 121 K-CGKNYKRLRIGIGRP----PDTAHI-IRHVLGNFS-SPERYFLLPIID-NIARSL--- 169
+ Y RLRIGIG P P++A + + NF P R +ID I RSL
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRREEQDVIDAAIERSLAVM 181
Query: 170 PLLAKRE 176
P++ K E
Sbjct: 182 PMIVKGE 188
>gi|227494753|ref|ZP_03925069.1| aminoacyl-tRNA hydrolase [Actinomyces coleocanis DSM 15436]
gi|226831753|gb|EEH64136.1| aminoacyl-tRNA hydrolase [Actinomyces coleocanis DSM 15436]
Length = 198
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 98/161 (60%), Gaps = 9/161 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE---GQLDGLR--- 55
+++ GLGNPG +Y NRHNIG M + + + K + A+++ G L G R
Sbjct: 6 WLIVGLGNPGKKYARNRHNIGHMVVQAVVAEANGSFSKHRAGAQVATVRLGLLPGGRPGP 65
Query: 56 -TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L +MN+SG + +M F+K+ + ++ LV+HD++D+D LRLK GGG+ GHNG
Sbjct: 66 AVHLAYLDCYMNVSGGPVANLMKFFKV-DADHLLVVHDEMDIDAHLLRLKQGGGEGGHNG 124
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
LKSIS+ G KNY RLR G+GRPP +VLG+FS+ +
Sbjct: 125 LKSISQSIGTKNYCRLRFGVGRPPGRMDPADYVLGDFSAKD 165
>gi|307544465|ref|YP_003896944.1| peptidyl-tRNA hydrolase [Halomonas elongata DSM 2581]
gi|307216489|emb|CBV41759.1| peptidyl-tRNA hydrolase [Halomonas elongata DSM 2581]
Length = 199
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 91/172 (52%), Gaps = 8/172 (4%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ GL NPG EY RHN G ID R P +KKF + +LDG L++
Sbjct: 7 IIGLANPGSEYEATRHNAGAWLIDALVRDAGDTLRP--EKKFLGRYARIRLDGQDIHLLE 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ + F+KL E LV HD+LDL GT R KTGGG GHNGL+ I
Sbjct: 65 PTTFMNRSGGAVAALAQFFKLAPDE-LLVAHDELDLAPGTARYKTGGGHGGHNGLRDIVR 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G + + RLR+GIG P D + +VLG ER + ID +LP
Sbjct: 124 ALGNDNGFHRLRLGIGHPGDARQVTNYVLGRPGKAERAAIDAAIDECCATLP 175
>gi|145628757|ref|ZP_01784557.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 22.1-21]
gi|144979227|gb|EDJ88913.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 22.1-21]
Length = 194
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+ + KF + + ++G L+ P
Sbjct: 6 LIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALASFYRI-KPEEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S +R L ++D + ++ K +
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEIIFKDGMIK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|68052960|sp|Q6KHA3|PTH_MYCMO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 179
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 94/170 (55%), Gaps = 11/170 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP +Y +NRHN+G+M +D+I K+KF + + I+ K
Sbjct: 1 MKLIIGLGNPDPKYQKNRHNVGYMVVDKILENLRLKINKEKFSGIFVKTE----EFIIAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKL-PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSG + + ++K+ PN N L+I+DD+ + G +K GG G NG+K I
Sbjct: 57 PTTYMNLSGDFVKNISTYFKVSPN--NILIIYDDMSYEVGQAAIKPKGGSNGQNGIKDIL 114
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
K + RL+IGIG+ + A +HVL +F+ E + +I+ A +
Sbjct: 115 LKMNTEEIPRLKIGIGKNQEAA---KHVLSDFTLEEFKIIDLVINQAAEA 161
>gi|119944670|ref|YP_942350.1| aminoacyl-tRNA hydrolase [Psychromonas ingrahamii 37]
gi|166229440|sp|A1STD6|PTH_PSYIN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119863274|gb|ABM02751.1| peptidyl-tRNA hydrolase [Psychromonas ingrahamii 37]
Length = 197
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 96/175 (54%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G + ++ S + KF+ Q G L+ P
Sbjct: 7 LLVGLANPGPEYAQTRHNAGQWYVSQLASQENIQLKAEPKFYGLTGRIQFAGNDLRLLVP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E L+ HD+LDL G + K GGG GHNGLK I +K
Sbjct: 67 TTFMNLSGKAVAAMANFYRI-KPEEILIAHDELDLLPGIAKFKLGGGHGGHNGLKDIIQK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G KN+ RLRIGIG P D + +VLG S E+ + ID AR +L +
Sbjct: 126 LGNDKNFYRLRIGIGHPGDKNRVSGYVLGKAPSSEQNLIDQSIDEAARCTHILGQ 180
>gi|145634610|ref|ZP_01790319.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittAA]
gi|145268155|gb|EDK08150.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittAA]
Length = 194
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+ + KF + + ++G L+ P
Sbjct: 6 LIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALASFYRI-KPEEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S +R L ++D + ++ + V
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEMIFRDGMVK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|325473599|gb|EGC76790.1| peptidyl-tRNA hydrolase [Treponema denticola F0402]
Length = 203
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 13/163 (7%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKF---HAEISEGQLDGLRTILI 59
++ LGN G +Y RHN ++ D I W+ KF +A++ G L+
Sbjct: 4 LIVFLGNYGKKYENTRHNAAWILCDSIE-IGSNAVWQGKFKGQYAKLPSSMTPGRAVHLL 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+T+MNLSG+S++ +F++L EN L++HD+L+L G L K GG GHNGL+SI
Sbjct: 63 KPETYMNLSGESVIAAASFFRL-KPENILIVHDELELKPGILSFKWSGGLGGHNGLRSIK 121
Query: 120 EKCG-KNYKRLRIGIGRPPDTAH-------IIRHVLGNFSSPE 154
++ RLRIGIGRP ++ I +VL F+ E
Sbjct: 122 SVLNTADFFRLRIGIGRPDFSSQGGDASPDISGYVLSRFAQSE 164
>gi|161523691|ref|YP_001578703.1| peptidyl-tRNA hydrolase [Burkholderia multivorans ATCC 17616]
gi|189351545|ref|YP_001947173.1| peptidyl-tRNA hydrolase [Burkholderia multivorans ATCC 17616]
gi|221211190|ref|ZP_03584169.1| peptidyl-tRNA hydrolase [Burkholderia multivorans CGD1]
gi|238687045|sp|A9AEY6|PTH_BURM1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|160341120|gb|ABX14206.1| Aminoacyl-tRNA hydrolase [Burkholderia multivorans ATCC 17616]
gi|189335567|dbj|BAG44637.1| PTH1 family peptidyl-tRNA hydrolase [Burkholderia multivorans ATCC
17616]
gi|221168551|gb|EEE01019.1| peptidyl-tRNA hydrolase [Burkholderia multivorans CGD1]
Length = 199
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 88/139 (63%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLIDQLAREAGATLRDERRFHGFYAKARLYGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ + +F+K LP+ LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 64 QTYMNRSGQSVVALAHFFKILPD--QILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 121
Query: 121 K-CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 122 HLSSQQYWRLRIGIGHPRD 140
>gi|218549105|ref|YP_002382896.1| peptidyl-tRNA hydrolase [Escherichia fergusonii ATCC 35469]
gi|226723255|sp|B7LSI6|PTH_ESCF3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|218356646|emb|CAQ89272.1| peptidyl-tRNA hydrolase [Escherichia fergusonii ATCC 35469]
gi|324113963|gb|EGC07937.1| peptidyl-tRNA hydrolase [Escherichia fergusonii B253]
gi|325497521|gb|EGC95380.1| peptidyl-tRNA hydrolase [Escherichia fergusonii ECD227]
Length = 194
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 92/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L+G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDFLAERLRAPLREEPKFFGYTSRINLEGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVTEQKLIDEAIDEAAR 171
>gi|237731790|ref|ZP_04562271.1| peptidyl-tRNA hydrolase [Citrobacter sp. 30_2]
gi|226907329|gb|EEH93247.1| peptidyl-tRNA hydrolase [Citrobacter sp. 30_2]
Length = 194
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P + KF S L+G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLRDEPKFFGYTSRVTLEGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVGAMASFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLR+GIG P D ++ VLG E+ + ID AR +L K
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEILFK 178
>gi|332111765|gb|EGJ11745.1| peptidyl-tRNA hydrolase [Rubrivivax benzoatilyticus JA2]
Length = 213
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 94/178 (52%), Gaps = 10/178 (5%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIH---SFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
GLGNPG EY RHN GF ++ + P ++ + A + L++P
Sbjct: 7 GLGNPGPEYEATRHNAGFWWLEALADKLGARLVP--ERGYQALAARVNTPHGPVWLLEPM 64
Query: 63 TFMNLSGQSLLEVMNFYKL-PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG S+ + F+K+ PN LV+HD+LDL G ++K GG AGHNGLK I +
Sbjct: 65 TYMNRSGFSVATLARFFKIAPN--EILVVHDELDLQPGEAKIKLGGSAAGHNGLKDIHSQ 122
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID-NIARSLPLLAKRED 177
G ++ RLR+GIG P A ++ VL S R + I+ ++A S LLA D
Sbjct: 123 LGTLDFWRLRLGIGHPGVRAEVVNWVLKKPSPDHREAIAKAIEQSLAASDLLLAGEMD 180
>gi|325524745|gb|EGD02727.1| peptidyl-tRNA hydrolase [Burkholderia sp. TJI49]
Length = 199
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 88/139 (63%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLIDQLAREAGATLRDERRFHGFYAKARLHGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ + +F+K +P+ LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 64 QTYMNRSGQSVVALAHFFKIMPD--QILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 121
Query: 121 K-CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 122 HLSSQQYWRLRIGIGHPRD 140
>gi|304397551|ref|ZP_07379428.1| peptidyl-tRNA hydrolase [Pantoea sp. aB]
gi|304354723|gb|EFM19093.1| peptidyl-tRNA hydrolase [Pantoea sp. aB]
Length = 195
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 96/185 (51%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + H ++ KF+ + + G L+ P
Sbjct: 6 LIVGLANPGAEYAATRHNAGAWYLDLLAERHNQSLKEEGKFYGYTARLMIAGEDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 66 TTFMNLSGKAVAAMATFYRIAP-EEILVAHDELDLPPGVAKFKQGGGHGGHNGLKDIISK 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P D + VLG + E+ + ID R L K + +
Sbjct: 125 LGNNNNFHRLRIGIGHPGDRNKVTGFVLGKPPASEQKLIDDAIDEAVRCTELWLKEDRIK 184
Query: 180 FLNHI 184
+N +
Sbjct: 185 AMNRL 189
>gi|88861338|ref|ZP_01135968.1| peptidyl-tRNA hydrolase [Pseudoalteromonas tunicata D2]
gi|88816604|gb|EAR26429.1| peptidyl-tRNA hydrolase [Pseudoalteromonas tunicata D2]
Length = 189
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 97/175 (55%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G I+ + + ++ K+H + + +L+ P
Sbjct: 1 MLVGLANPGPEYSKTRHNAGAWFIEELAARYNCILKHDPKYHGLTGKIFIQDQEFLLLIP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ + NF+K+P +EN LV HD++DL G + K GGG GHNGLK I K
Sbjct: 61 TTYMNLSGKSVSALANFFKIP-VENILVAHDEMDLPTGVAKFKRGGGHGGHNGLKDIIAK 119
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
N + RLR+GIG P + VLG S E+ + +D R + +LAK
Sbjct: 120 MANNKEFLRLRVGIGHPGHREMVTGWVLGKASKAEQEQMDAAVDEAVRCMEILAK 174
>gi|107023737|ref|YP_622064.1| peptidyl-tRNA hydrolase [Burkholderia cenocepacia AU 1054]
gi|116690824|ref|YP_836447.1| peptidyl-tRNA hydrolase [Burkholderia cenocepacia HI2424]
gi|119390917|sp|Q1BTG4|PTH_BURCA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199312|sp|A0KAM7|PTH_BURCH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|105893926|gb|ABF77091.1| peptidyl-tRNA hydrolase [Burkholderia cenocepacia AU 1054]
gi|116648913|gb|ABK09554.1| peptidyl-tRNA hydrolase [Burkholderia cenocepacia HI2424]
Length = 199
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 87/139 (62%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLIDQLAREAGTTLRDERRFHGFYAKARLHGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ + F+K LP+ LV HD+LDL GT++LK GGG GHNGLK I+
Sbjct: 64 QTYMNRSGQSVVALAQFFKILPD--QILVAHDELDLPPGTVKLKLGGGSGGHNGLKDITA 121
Query: 121 K-CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 122 HLSSQQYWRLRIGIGHPRD 140
>gi|291085269|ref|ZP_06352585.2| aminoacyl-tRNA hydrolase [Citrobacter youngae ATCC 29220]
gi|291071445|gb|EFE09554.1| aminoacyl-tRNA hydrolase [Citrobacter youngae ATCC 29220]
Length = 202
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P + KF S L+G L+ P
Sbjct: 13 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLRDEPKFFGYTSRVTLEGEDVRLLVP 72
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 73 TTFMNLSGKAVGAMASFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 131
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLR+GIG P D ++ VLG E+ + ID AR +L K
Sbjct: 132 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEILFK 186
>gi|314969388|gb|EFT13486.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL037PA1]
Length = 200
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 15/167 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFH--------AEISEGQ 50
++V GLGNPG Y RHN+G I R PA ++ A +
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 51 LDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
+D IL++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LRLK GGGD
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGITR-DHLIVVHDEIDLDPGRLRLKKGGGDN 123
Query: 111 GHNGLKSISE--KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
GHNGLKSI + G ++ R+R+G+GRPP VL + +R
Sbjct: 124 GHNGLKSIRAHLRTG-DFIRVRLGVGRPPGHQDPADWVLARVPARQR 169
>gi|260914450|ref|ZP_05920919.1| aminoacyl-tRNA hydrolase [Pasteurella dagmatis ATCC 43325]
gi|260631551|gb|EEX49733.1| aminoacyl-tRNA hydrolase [Pasteurella dagmatis ATCC 43325]
Length = 194
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 98/175 (56%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G IDR+ F+F + KF + + ++G + P
Sbjct: 6 LIVGLGNPGDKYADTRHNAGEWLIDRLARQFNFTLNPENKFFGKTARVVINGNEVRFLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LVIHD+LDL G ++K GGG GHNGL+ +
Sbjct: 66 TTFMNLSGKAISALANFYRI-KPEEILVIHDELDLPPGVAKIKQGGGYGGHNGLRDTIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
KN+ RLR+GIG P D + +VL S + + +D + + +L K
Sbjct: 125 LANNKNFYRLRVGIGHPGDKNLVAAYVLNKPSPADWQLIDKALDEASTCVEILIK 179
>gi|78067603|ref|YP_370372.1| peptidyl-tRNA hydrolase [Burkholderia sp. 383]
gi|170734149|ref|YP_001766096.1| peptidyl-tRNA hydrolase [Burkholderia cenocepacia MC0-3]
gi|206559195|ref|YP_002229955.1| peptidyl-tRNA hydrolase [Burkholderia cenocepacia J2315]
gi|254247175|ref|ZP_04940496.1| Peptidyl-tRNA hydrolase [Burkholderia cenocepacia PC184]
gi|119390919|sp|Q39CT8|PTH_BURS3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238688612|sp|B1JYQ1|PTH_BURCC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238693088|sp|B4EAR1|PTH_BURCJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|77968348|gb|ABB09728.1| peptidyl-tRNA hydrolase [Burkholderia sp. 383]
gi|124871951|gb|EAY63667.1| Peptidyl-tRNA hydrolase [Burkholderia cenocepacia PC184]
gi|169817391|gb|ACA91974.1| Aminoacyl-tRNA hydrolase [Burkholderia cenocepacia MC0-3]
gi|198035232|emb|CAR51106.1| peptidyl-tRNA hydrolase [Burkholderia cenocepacia J2315]
Length = 199
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 87/139 (62%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLIDQLAREAGTTLRDERRFHGFYAKARLHGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ + F+K LP+ LV HD+LDL GT++LK GGG GHNGLK I+
Sbjct: 64 QTYMNRSGQSVVALAQFFKILPD--QILVAHDELDLPPGTVKLKLGGGSGGHNGLKDITA 121
Query: 121 K-CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 122 HLSSQQYWRLRIGIGHPRD 140
>gi|319945391|ref|ZP_08019652.1| aminoacyl-tRNA hydrolase [Lautropia mirabilis ATCC 51599]
gi|319741384|gb|EFV93810.1| aminoacyl-tRNA hydrolase [Lautropia mirabilis ATCC 51599]
Length = 216
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 94/179 (52%), Gaps = 11/179 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK---KFHAEISEGQLDGLRTILI 59
++ GLGNP ++ +RHN GF ID + +P + KF ++ E ++ L+
Sbjct: 6 LIVGLGNPTDQHAHDRHNAGFWFIDAL--LRHYPGQMRPDAKFLGDVGEVRIGTQVVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SGQS+ + FY+L + LV +D+LDL G+ RLK GG HNGL+ I+
Sbjct: 64 KPMTYMNRSGQSVGALARFYRL-EPADILVAYDELDLMPGSARLKLGGSST-HNGLRDIT 121
Query: 120 EKCGK-NYKRLRIGIGRPPD---TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G Y RLR+GIG P ++ VLG S ++ + D LP+L +
Sbjct: 122 AHLGTPRYWRLRLGIGHPRSLNLNKSVVDFVLGKPSQSDQQLIDQATDRSVDHLPILMR 180
>gi|296128742|ref|YP_003635992.1| peptidyl-tRNA hydrolase [Cellulomonas flavigena DSM 20109]
gi|296020557|gb|ADG73793.1| peptidyl-tRNA hydrolase [Cellulomonas flavigena DSM 20109]
Length = 206
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 104/183 (56%), Gaps = 16/183 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-------AWKKKFHAEISE------ 48
++V GLGNPG +Y NRHN+G M +D + P ++ A ++
Sbjct: 6 WLVVGLGNPGPQYAGNRHNVGQMVLDELSRRTGAPFVSRGGGLLGRRPQAATADARLGTL 65
Query: 49 -GQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGG 107
G + G R +L KP T+MN+SG + + ++ + +E +V+HD+LD+ F +RLK GG
Sbjct: 66 PGGVPGPRVVLAKPSTYMNVSGGPVAALARYHDV-PVERVVVVHDELDIPFADVRLKRGG 124
Query: 108 GDAGHNGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
G+ GHNGL+ S+ G K+Y R+R+G+GRPP VL +FS PER L ++D A
Sbjct: 125 GEGGHNGLRDTSKALGSKDYVRVRVGVGRPPGRQDPADFVLKDFSGPERKDLPWLVDRAA 184
Query: 167 RSL 169
++
Sbjct: 185 DAV 187
>gi|300781629|ref|ZP_07091483.1| aminoacyl-tRNA hydrolase [Corynebacterium genitalium ATCC 33030]
gi|300533336|gb|EFK54397.1| aminoacyl-tRNA hydrolase [Corynebacterium genitalium ATCC 33030]
Length = 213
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 87/154 (56%), Gaps = 13/154 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMC----IDRIHSFHFFPAWKKKFHAEISEGQLDGLRTI 57
++V GLGNPG Y +HN+G+M +D++ + P K +++G
Sbjct: 27 WLVVGLGNPGARYDATKHNVGYMVQDILLDQVAAT-LAPLNGHKVTVAVADG------VA 79
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
+ TFMNLSG+ + + + ++ +V+HD+LDL G +R+K GG + GHNGLKS
Sbjct: 80 YARSTTFMNLSGEGIAPLARELGI-TPDHVVVLHDELDLPPGKVRIKLGGNENGHNGLKS 138
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNF 150
++E G ++Y R+RIGIGRPP + VL +
Sbjct: 139 LTEHLGTRDYVRIRIGIGRPPKGMPVPEWVLSSL 172
>gi|124514472|gb|EAY55985.1| Peptidyl-tRNA hydrolase [Leptospirillum rubarum]
Length = 187
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 89/172 (51%), Gaps = 8/172 (4%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
+ GLGNPG EY RHN G + +D + P +K A+ EG+ G + IL+ P T
Sbjct: 6 IVGLGNPGREYERTRHNAGKIFLDSLSERVGIPLNHQKPIAQWGEGEWKGEKLILVFPLT 65
Query: 64 FMNLSGQSLLEV-MNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
+MNLSG+ + + M LP E+ LVI DD+D+ G LR + G G GL SI +
Sbjct: 66 YMNLSGKVIPWLRMKGVHLP--EDLLVILDDMDIPLGALRFREKGRSGGQKGLSSIIDAL 123
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL----LPIIDNIARSL 169
G + R++IGIGRP + +VLG+ E L P D + R L
Sbjct: 124 GGDRISRIKIGIGRPIEGQDPSDYVLGSLHPEESRLLEKARQPFFDIVDRWL 175
>gi|203288214|ref|YP_002223229.1| peptidyl-tRNA hydrolase [Borrelia recurrentis A1]
gi|226694248|sp|B5RQC4|PTH_BORRA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|201085434|gb|ACH95008.1| peptidyl-tRNA hydrolase [Borrelia recurrentis A1]
Length = 188
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 79/133 (59%), Gaps = 3/133 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG + RHN+GF ID++ + K K + E ++ +D R +LIKP
Sbjct: 4 LIVGLGNPGSNFLHTRHNVGFGLIDKLVMKNALSLRKAK-NYEYADFNVDSRRIVLIKPL 62
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG V + + + + N LV+ D++DL G RL+ GG + HNGL+SISE
Sbjct: 63 TYMNLSGNIFPCVFSKFYMK-INNLLVVVDNVDLPLGKCRLRKVGGASTHNGLRSISESL 121
Query: 123 GKN-YKRLRIGIG 134
G Y RL IG+G
Sbjct: 122 GSTKYGRLYIGVG 134
>gi|288803708|ref|ZP_06409137.1| aminoacyl-tRNA hydrolase [Prevotella melaninogenica D18]
gi|288333797|gb|EFC72243.1| aminoacyl-tRNA hydrolase [Prevotella melaninogenica D18]
Length = 186
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 94/172 (54%), Gaps = 5/172 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG+EY RHN GFM +D ++ K + ++E + G + IL+KP
Sbjct: 1 MICGLGNPGYEYEGTRHNTGFMVLDAFAKASNI-VFEDKRYGFVAETTVKGRKIILLKPT 59
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG ++ +N + + LV+ DD+ L G RLK G + GHNGL I +
Sbjct: 60 TFMNLSGNAVRYWLNKENI-DQSRLLVVSDDVALPLGAFRLKGNGSNGGHNGLGHIQQLI 118
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID---NIARSLPL 171
G+NY RLR+G+G + VLG +S E L P ID +I +S L
Sbjct: 119 GQNYARLRMGVGNDYPRGGQVDWVLGRYSDEEMKELQPAIDLGVDIIKSFAL 170
>gi|50842020|ref|YP_055247.1| peptidyl-tRNA hydrolase [Propionibacterium acnes KPA171202]
gi|289424236|ref|ZP_06426019.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes SK187]
gi|289428385|ref|ZP_06430071.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes J165]
gi|295130102|ref|YP_003580765.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes SK137]
gi|68052928|sp|Q6AAC7|PTH_PROAC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|50839622|gb|AAT82289.1| peptidyl-tRNA hydrolase [Propionibacterium acnes KPA171202]
gi|289154933|gb|EFD03615.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes SK187]
gi|289158357|gb|EFD06574.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes J165]
gi|291375619|gb|ADD99473.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes SK137]
gi|313765347|gb|EFS36711.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL013PA1]
gi|313792870|gb|EFS40937.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA1]
gi|313802677|gb|EFS43899.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA2]
gi|313806690|gb|EFS45197.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL087PA2]
gi|313814602|gb|EFS52316.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL025PA1]
gi|313815246|gb|EFS52960.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL059PA1]
gi|313817233|gb|EFS54947.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL046PA2]
gi|313821705|gb|EFS59419.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL036PA1]
gi|313824404|gb|EFS62118.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL036PA2]
gi|313826761|gb|EFS64475.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL063PA1]
gi|313828551|gb|EFS66265.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL063PA2]
gi|313840313|gb|EFS78027.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL086PA1]
gi|314916010|gb|EFS79841.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL005PA4]
gi|314916915|gb|EFS80746.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL050PA1]
gi|314921556|gb|EFS85387.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL050PA3]
gi|314931120|gb|EFS94951.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL067PA1]
gi|314954823|gb|EFS99229.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL027PA1]
gi|314958989|gb|EFT03091.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL002PA1]
gi|314961284|gb|EFT05385.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL002PA2]
gi|314964288|gb|EFT08388.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL082PA1]
gi|314980490|gb|EFT24584.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL072PA2]
gi|314987503|gb|EFT31594.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL005PA2]
gi|314989031|gb|EFT33122.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL005PA3]
gi|315078696|gb|EFT50727.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL053PA2]
gi|315081844|gb|EFT53820.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL078PA1]
gi|315082663|gb|EFT54639.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL027PA2]
gi|315086372|gb|EFT58348.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL002PA3]
gi|315087620|gb|EFT59596.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL072PA1]
gi|315099744|gb|EFT71720.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL059PA2]
gi|315101951|gb|EFT73927.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL046PA1]
gi|315106542|gb|EFT78518.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL030PA1]
gi|315110330|gb|EFT82306.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL030PA2]
gi|327445368|gb|EGE92022.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL013PA2]
gi|327454825|gb|EGF01480.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL087PA3]
gi|327455682|gb|EGF02337.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL083PA2]
gi|327456829|gb|EGF03484.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL092PA1]
gi|328755881|gb|EGF69497.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL087PA1]
gi|328756664|gb|EGF70280.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL025PA2]
gi|328758615|gb|EGF72231.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL020PA1]
Length = 200
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 15/167 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFH--------AEISEGQ 50
++V GLGNPG Y RHN+G I R PA ++ A +
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 51 LDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
+D IL++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LRLK GGGD
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGI-TPDHLIVVHDEIDLDPGRLRLKKGGGDN 123
Query: 111 GHNGLKSISE--KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
GHNGLKSI + G ++ R+R+G+GRPP VL + +R
Sbjct: 124 GHNGLKSIRAHLRTG-DFIRVRLGVGRPPGHQDPADWVLARVPARQR 169
>gi|319898084|ref|YP_004136281.1| peptidyl-tRNA hydrolase [Haemophilus influenzae F3031]
gi|317433590|emb|CBY81974.1| peptidyl-tRNA hydrolase [Haemophilus influenzae F3031]
Length = 194
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+ + KF + + ++G L+ P
Sbjct: 6 LIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALASFYRI-KPEEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S +R L ++D + ++ + +
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRNALEKVLDEATDCVEMIFRDGMIK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|113969351|ref|YP_733144.1| peptidyl-tRNA hydrolase [Shewanella sp. MR-4]
gi|114046578|ref|YP_737128.1| peptidyl-tRNA hydrolase [Shewanella sp. MR-7]
gi|119391004|sp|Q0HLI0|PTH_SHESM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391005|sp|Q0HXT4|PTH_SHESR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|113884035|gb|ABI38087.1| peptidyl-tRNA hydrolase [Shewanella sp. MR-4]
gi|113888020|gb|ABI42071.1| peptidyl-tRNA hydrolase [Shewanella sp. MR-7]
Length = 195
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 100/191 (52%), Gaps = 8/191 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG EY + RHN G ++ RI P K+ + L G L+
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVEELARICGVSLVP--DSKYFGLTARAVLHGKDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSG+++ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 64 IPTTYMNLSGKAVGALANFFRI-TPEEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDII 122
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
K KN+ RLRIGIG P D + +VLG + E+ + +D RS +L K +
Sbjct: 123 AKLANDKNFYRLRIGIGHPGDKNKVSGYVLGKAPAKEQELINAAVDEAVRSTEVLFKEDM 182
Query: 178 VSFLNHIVSVR 188
V + + S +
Sbjct: 183 VKAMTRLHSFK 193
>gi|254251378|ref|ZP_04944696.1| Peptidyl-tRNA hydrolase [Burkholderia dolosa AUO158]
gi|124893987|gb|EAY67867.1| Peptidyl-tRNA hydrolase [Burkholderia dolosa AUO158]
Length = 199
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 110/187 (58%), Gaps = 15/187 (8%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF ID++ +++FH ++ ++ G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLIDQLAREAGATLRDERRFHGFYAKARVHGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ + +F+K LP+ LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 64 QTYMNRSGQSVVALAHFFKILPD--QILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 121
Query: 121 K-CGKNYKRLRIGIGRP----PDTAHI-IRHVLGNFS-SPERYFLLPIID-NIARSL--- 169
+ Y RLRIGIG P P++A + + NF P R +ID +I R+L
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRREEQDVIDASIERALAVM 181
Query: 170 PLLAKRE 176
P++ K E
Sbjct: 182 PMIVKGE 188
>gi|117919460|ref|YP_868652.1| peptidyl-tRNA hydrolase [Shewanella sp. ANA-3]
gi|166229454|sp|A0KTX7|PTH_SHESA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|117611792|gb|ABK47246.1| peptidyl-tRNA hydrolase [Shewanella sp. ANA-3]
Length = 195
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 100/191 (52%), Gaps = 8/191 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG EY + RHN G ++ RI P K+ + L G L+
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVEELARICGVSLVP--DSKYFGLTARAVLHGKDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSG+++ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 64 IPTTYMNLSGKAVGALANFFRI-TPEEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDII 122
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
K KN+ RLRIGIG P D + +VLG + E+ + +D RS +L K +
Sbjct: 123 AKLANDKNFYRLRIGIGHPGDKNKVSGYVLGKAPAKEQELINAAVDEAVRSTEVLFKEDM 182
Query: 178 VSFLNHIVSVR 188
V + + S +
Sbjct: 183 VKAMTRLHSFK 193
>gi|327333604|gb|EGE75324.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes HL096PA3]
Length = 200
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 15/167 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFH--------AEISEGQ 50
++V GLGNPG Y RHN+G I R PA ++ A +
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 51 LDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
+D IL++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LRLK GGGD
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGI-TPDHLIVVHDEIDLDPGRLRLKKGGGDN 123
Query: 111 GHNGLKSISE--KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
GHNGLKSI + G ++ R+R+G+GRPP VL + +R
Sbjct: 124 GHNGLKSIRAHLRTG-DFIRVRLGVGRPPGHQDPADWVLARVPARQR 169
>gi|314926810|gb|EFS90641.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL036PA3]
Length = 200
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 92/170 (54%), Gaps = 15/170 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFH--------AEISEGQ 50
++V GLGNPG Y RHN+G I R PA ++ A +
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 51 LDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
+D IL++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LRLK GGGD
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGI-TPDHLIVVHDEIDLDPGRLRLKKGGGDN 123
Query: 111 GHNGLKSISE--KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
GHNGLKSI + G ++ R+R+G+GRPP VL + +R +
Sbjct: 124 GHNGLKSIRAHIRTG-DFIRVRLGVGRPPGHQDPADWVLARVPARQRAEM 172
>gi|302338329|ref|YP_003803535.1| peptidyl-tRNA hydrolase [Spirochaeta smaragdinae DSM 11293]
gi|301635514|gb|ADK80941.1| peptidyl-tRNA hydrolase [Spirochaeta smaragdinae DSM 11293]
Length = 197
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 6/152 (3%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHA--EISEGQLDGLRTILIKPQT 63
GLGNPG +Y E RHN+GF+ ++ + + F W+K F + + + L++P T
Sbjct: 8 GLGNPGPQYRETRHNVGFLVLEAL-AKEFGVEWRKPFFSPYRFARHRHSNAMLFLVQPLT 66
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
FMN SG L ++ + E+ ++ D+LDL G +R++ GG DAGHNGLKS+ G
Sbjct: 67 FMNRSGDVLSAILKKSGASS-ESMFLVCDNLDLAPGQVRIRMGGSDAGHNGLKSVIAAAG 125
Query: 124 K-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+ R+ +GIGR P I+ HVLG S E
Sbjct: 126 TGEFLRIYVGIGR-PKGGTIVDHVLGIPSEGE 156
>gi|256821849|ref|YP_003145812.1| peptidyl-tRNA hydrolase [Kangiella koreensis DSM 16069]
gi|256795388|gb|ACV26044.1| peptidyl-tRNA hydrolase [Kangiella koreensis DSM 16069]
Length = 197
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 96/168 (57%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y RHN G ++ + + P + KFH +G +DG +L+ P
Sbjct: 6 LIVGLANPGTQYDGTRHNAGAWYVEELARAYSIPLKTESKFHGLFGKGFIDGHEVMLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ V NFYK+ E LV HD+LD+D GTL+LK GGG GHNGL+
Sbjct: 66 TTFMNLSGKAIQAVANFYKV-EPEQILVAHDELDIDPGTLKLKKGGGHGGHNGLRDTISS 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N + RLR+GIG P + + +VL S +R ++ ID R
Sbjct: 125 LGNNKEFMRLRVGIGHPGHKSQVTGYVLSKPSPDDRNAIILAIDEAVR 172
>gi|238913684|ref|ZP_04657521.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
Length = 194
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L+G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLR+GIG P D ++ VLGN E+ + ID AR L K
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGNPPVSEQKLIDEAIDEAARCTELWFK 178
>gi|313772664|gb|EFS38630.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL074PA1]
gi|313810887|gb|EFS48601.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL083PA1]
gi|313832006|gb|EFS69720.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL007PA1]
gi|313834454|gb|EFS72168.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL056PA1]
gi|314974456|gb|EFT18551.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL053PA1]
gi|314977354|gb|EFT21449.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL045PA1]
gi|314985547|gb|EFT29639.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL005PA1]
gi|315097620|gb|EFT69596.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL038PA1]
gi|327331621|gb|EGE73360.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes HL096PA2]
gi|327446982|gb|EGE93636.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL043PA1]
gi|327449981|gb|EGE96635.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL043PA2]
gi|328761612|gb|EGF75128.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes HL099PA1]
Length = 200
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 15/167 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFH--------AEISEGQ 50
++V GLGNPG Y RHN+G I R PA ++ A +
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 51 LDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
+D IL++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LRLK GGGD
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGI-TPDHLIVVHDEIDLDPGRLRLKKGGGDY 123
Query: 111 GHNGLKSISE--KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
GHNGLKSI + G ++ R+R+G+GRPP VL + +R
Sbjct: 124 GHNGLKSIRAHLRTG-DFIRVRLGVGRPPGHQDPADWVLARVPARQR 169
>gi|47459376|ref|YP_016238.1| peptidyl-tRNA hydrolase [Mycoplasma mobile 163K]
gi|47458706|gb|AAT28027.1| peptidyl-tRNA hydrolase [Mycoplasma mobile 163K]
Length = 190
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 94/170 (55%), Gaps = 11/170 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP +Y +NRHN+G+M +D+I K+KF + + I+ K
Sbjct: 12 MKLIIGLGNPDPKYQKNRHNVGYMVVDKILENLRLKINKEKFSGIFVKTE----EFIIAK 67
Query: 61 PQTFMNLSGQSLLEVMNFYKL-PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSG + + ++K+ PN N L+I+DD+ + G +K GG G NG+K I
Sbjct: 68 PTTYMNLSGDFVKNISTYFKVSPN--NILIIYDDMSYEVGQAAIKPKGGSNGQNGIKDIL 125
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
K + RL+IGIG+ + A +HVL +F+ E + +I+ A +
Sbjct: 126 LKMNTEEIPRLKIGIGKNQEAA---KHVLSDFTLEEFKIIDLVINQAAEA 172
>gi|327542673|gb|EGF29144.1| peptidyl-tRNA hydrolase [Rhodopirellula baltica WH47]
Length = 167
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 41 KFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGT 100
KF EISE +++ + +++ P T+MN SGQS+ + M+FYKL + E+ LVI DDL+L+ G
Sbjct: 18 KFEGEISECRIENEKVLVLCPHTYMNASGQSVRKAMDFYKL-SPEDILVICDDLNLETGR 76
Query: 101 LRLKTGGGDAGHNGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
+RL+ G G GL I G + + RL+IGIGRPP + +VLG F E
Sbjct: 77 VRLRRSGSAGGQKGLVDIIRHLGSEQWARLKIGIGRPPAKWQVSDYVLGKFDKTE 131
>gi|83719915|ref|YP_441030.1| peptidyl-tRNA hydrolase [Burkholderia thailandensis E264]
gi|167579759|ref|ZP_02372633.1| peptidyl-tRNA hydrolase [Burkholderia thailandensis TXDOH]
gi|167617835|ref|ZP_02386466.1| peptidyl-tRNA hydrolase [Burkholderia thailandensis Bt4]
gi|257140317|ref|ZP_05588579.1| peptidyl-tRNA hydrolase [Burkholderia thailandensis E264]
gi|119390920|sp|Q2T1B9|PTH_BURTA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|83653740|gb|ABC37803.1| peptidyl-tRNA hydrolase [Burkholderia thailandensis E264]
Length = 201
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 87/139 (62%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLYGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ + +F+K LPN LV HD+LDL G ++LK GGG GHNGLK IS
Sbjct: 64 QTYMNRSGQSVVALAHFFKILPN--EILVAHDELDLPPGAVKLKLGGGSGGHNGLKDISA 121
Query: 121 K-CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 122 HLSSQQYWRLRIGIGHPRD 140
>gi|329296258|ref|ZP_08253594.1| peptidyl-tRNA hydrolase [Plautia stali symbiont]
Length = 195
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 96/185 (51%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + S H ++ KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAATRHNAGAWYVDLLCSRHNQSLKEEPKFFGYTARLSLAGEDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TF+NLSG+++ + FY++ E LV HD++DL G + K GGG GHNGLK I K
Sbjct: 66 TTFINLSGKAVAAMATFYRI-TPEEILVAHDEMDLPPGVAKFKQGGGHGGHNGLKDIISK 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLR+GIG P D + VLG + E+ + +D R L K + +
Sbjct: 125 LGNNNNFHRLRVGIGHPGDRNKVTGFVLGKAPASEQKLIDDAVDEAVRCTELWLKEDKIK 184
Query: 180 FLNHI 184
+N +
Sbjct: 185 AMNRL 189
>gi|326692374|ref|ZP_08229379.1| peptidyl-tRNA hydrolase [Leuconostoc argentinum KCTC 3773]
Length = 189
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G +Y + RHNIGFM +D + H K A ++ + G + +L+K
Sbjct: 1 MKYIIGLGNIGSKYEQTRHNIGFMAVDAFAAAHQVAFSPSKHFALTAKVTVAGEQVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-S 119
P T+MN SG+++ V++++ ++ LV+ DD+DL FG LR + G GHNGLKSI +
Sbjct: 61 PTTYMNDSGKAVRAVLDYFGGAIDDDVLVLVDDMDLPFGKLRFRGKGSAGGHNGLKSIMA 120
Query: 120 EKCGKNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ + RL+ G+G P D +I +VLG F+ E + ++D ++ K DV
Sbjct: 121 HTDSQTFLRLKFGLGHPERDKQAVINYVLGKFTPAEMPAVEQMLDRSVAAMTDWIKGADV 180
Query: 179 SFLNH 183
+ L++
Sbjct: 181 AQLSN 185
>gi|218704726|ref|YP_002412245.1| peptidyl-tRNA hydrolase [Escherichia coli UMN026]
gi|293404747|ref|ZP_06648739.1| peptidyl-tRNA hydrolase [Escherichia coli FVEC1412]
gi|298380390|ref|ZP_06989989.1| PTH1 family peptidyl-tRNA hydrolase [Escherichia coli FVEC1302]
gi|300896591|ref|ZP_07115111.1| peptidyl-tRNA hydrolase [Escherichia coli MS 198-1]
gi|226723252|sp|B7N415|PTH_ECOLU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|218431823|emb|CAR12708.1| peptidyl-tRNA hydrolase [Escherichia coli UMN026]
gi|291426955|gb|EFE99981.1| peptidyl-tRNA hydrolase [Escherichia coli FVEC1412]
gi|298277832|gb|EFI19346.1| PTH1 family peptidyl-tRNA hydrolase [Escherichia coli FVEC1302]
gi|300359571|gb|EFJ75441.1| peptidyl-tRNA hydrolase [Escherichia coli MS 198-1]
Length = 194
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPLGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 171
>gi|254780007|ref|YP_003058114.1| peptidyl-tRNA hydrolase [Helicobacter pylori B38]
gi|254001920|emb|CAX30173.1| Peptidyl-tRNA hydrolase (PTH) [Helicobacter pylori B38]
Length = 186
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 103/194 (53%), Gaps = 19/194 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLR 55
M ++ GLGNP Y RHN GF +D + SF F P K +A + +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSP----KHNACLCVYK----D 52
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
IL+KPQT+MNLSG+S+L NFYK L L++HDDLDL G +R K GGG+ GHNGL
Sbjct: 53 FILLKPQTYMNLSGESVLSAKNFYKPKEL---LIVHDDLDLPLGVVRFKKGGGNGGHNGL 109
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KSI C +Y RLR+GI + +I HVL F E ++ +L +
Sbjct: 110 KSIDLLCSNSYYRLRVGISK---GIGVIEHVLSKFHKNEEPLKNAAFEHAKNALKFFIES 166
Query: 176 EDVSFLNHIVSVRK 189
D + + + +++K
Sbjct: 167 HDFNAMQNRFTLKK 180
>gi|119953562|ref|YP_945772.1| peptidyl-tRNA hydrolase [Borrelia turicatae 91E135]
gi|254783854|sp|A1R0L0|PTH_BORT9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119862333|gb|AAX18101.1| peptidyl-tRNA hydrolase [Borrelia turicatae 91E135]
Length = 188
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 86/153 (56%), Gaps = 4/153 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG + RHN+GF ID++ H + KK + E S+ + R +LIKP
Sbjct: 4 LIVGLGNPGSNFFHTRHNVGFGLIDKLVVKHGL-SLKKVKNYEYSDFNFENKRIVLIKPL 62
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG V + + + N L++ D++DL G +L+ GG + HNGL+SIS
Sbjct: 63 TYMNLSGNIFPSVFARFYMK-MTNLLIVVDNVDLPLGKCKLRKVGGTSTHNGLRSISGSL 121
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G Y RL IG+G +++ + VL FS E
Sbjct: 122 GSTKYSRLYIGVGNNNESS-LRDFVLAKFSDSE 153
>gi|16272343|ref|NP_438556.1| peptidyl-tRNA hydrolase [Haemophilus influenzae Rd KW20]
gi|260580543|ref|ZP_05848371.1| peptidyl-tRNA hydrolase [Haemophilus influenzae RdAW]
gi|1172722|sp|P44682|PTH_HAEIN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|1573366|gb|AAC22053.1| peptidyl-tRNA hydrolase (pth) [Haemophilus influenzae Rd KW20]
gi|260092885|gb|EEW76820.1| peptidyl-tRNA hydrolase [Haemophilus influenzae RdAW]
Length = 194
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+ + KF + + ++G L+ P
Sbjct: 6 LIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALASFYRI-KPEEILVIHDELDLPPGTAKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S +R L ++D + ++ + V
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEMIFRDGMVK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|183219659|ref|YP_001837655.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189909796|ref|YP_001961351.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167774472|gb|ABZ92773.1| Aminoacyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167778081|gb|ABZ96379.1| Peptidyl-tRNA hydrolase (PTH) [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 187
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NR NIGF +D I + KK + I G +G +L+K
Sbjct: 1 MKLIVGLGNPGDRYNNNRSNIGFKILDVIANNIGIEIKTKKKKSLIGRGDFEGDEVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTF LSG+S+L + +F K+ +++ +VIH+DL+L+ G + + GG + + G+ SIS
Sbjct: 61 PQTFSELSGESVLYIASFLKI-QVKDIVVIHEDLELELGQIVVTKGGENDSNPGVNSISV 119
Query: 121 KC-GKNYKRLRIGI 133
N+ R+RIG+
Sbjct: 120 SLRSPNFIRIRIGV 133
>gi|229844443|ref|ZP_04464583.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 6P18H1]
gi|229812692|gb|EEP48381.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 6P18H1]
Length = 194
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F + KF + + ++G L+ P
Sbjct: 6 LIVGLGNPGEKYADTRHNAGEWLIERLARRFKVLLNPENKFFGKTARTLVNGKEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ E LVIHD+LDL G +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPAGVAKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S +R L ++D + ++ K V
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEMIFKDGMVK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNCLNSFK 193
>gi|293189924|ref|ZP_06608604.1| aminoacyl-tRNA hydrolase [Actinomyces odontolyticus F0309]
gi|292821143|gb|EFF80090.1| aminoacyl-tRNA hydrolase [Actinomyces odontolyticus F0309]
Length = 200
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 93/162 (57%), Gaps = 9/162 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL-------DGL 54
++V GLGNPG +Y RHN+G++ +D + S + ++ +L G
Sbjct: 7 WLVVGLGNPGAQYAFTRHNVGYLTLDVLASRGGATLTSHRSRTHTADVRLGIGPGGVPGP 66
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R IL + ++MN SG + + F+K+ + LVIHDD+DL TLRLK GGG+ GHNG
Sbjct: 67 RVILARSDSYMNTSGGPISALATFHKI-DPSRILVIHDDMDLPAHTLRLKVGGGEGGHNG 125
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
LKS+S+ G ++Y RLRIG+GRPP +VL S ER
Sbjct: 126 LKSLSQHLGTRDYARLRIGVGRPPGRMDPADYVLATLPSKER 167
>gi|317181180|dbj|BAJ58966.1| peptidyl-tRNA hydrolase [Helicobacter pylori F32]
Length = 186
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 102/194 (52%), Gaps = 19/194 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLR 55
M ++ GLGNP Y RHN GF +D + SF F P K +A + +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSP----KHNACLCVYK----D 52
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
I +KPQT+MNLSG+S+L NFYK L L++HDDLDL G +R K GGG+ GHNGL
Sbjct: 53 FIFLKPQTYMNLSGESVLSTKNFYKTKEL---LIVHDDLDLPLGVVRFKNGGGNGGHNGL 109
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KSI C +Y RLR+GI + +I HVL F E + ++ +L +
Sbjct: 110 KSIDLLCSNSYYRLRVGISK---GIGVIEHVLSKFHKNEEPLKNAVFEHAKNALKFFIES 166
Query: 176 EDVSFLNHIVSVRK 189
D + + +++K
Sbjct: 167 HDFNATQNRFTLKK 180
>gi|319775677|ref|YP_004138165.1| peptidyl-tRNA hydrolase [Haemophilus influenzae F3047]
gi|317450268|emb|CBY86484.1| peptidyl-tRNA hydrolase [Haemophilus influenzae F3047]
Length = 194
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 104/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+ + KF + + ++G L+ P
Sbjct: 6 LIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ E LVIHD+LDL G +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPAGVAKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S +R L ++D + ++ K V
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEMIFKDGMVK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|187922590|ref|YP_001894232.1| peptidyl-tRNA hydrolase [Burkholderia phytofirmans PsJN]
gi|238689574|sp|B2SXG3|PTH_BURPP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|187713784|gb|ACD15008.1| Aminoacyl-tRNA hydrolase [Burkholderia phytofirmans PsJN]
Length = 200
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 87/139 (62%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLAREAGTTLRDERRFHGFYAKARLHGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ V F+K LP+ LV HD+LDL G+++LK GGG GHNGLK I+
Sbjct: 64 QTYMNRSGQSVVAVAQFFKILPD--EILVAHDELDLPPGSIKLKLGGGSGGHNGLKDITA 121
Query: 121 K-CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 122 HLSSQQYWRLRIGIGHPRD 140
>gi|317011632|gb|ADU85379.1| peptidyl-tRNA hydrolase [Helicobacter pylori SouthAfrica7]
Length = 186
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 91/160 (56%), Gaps = 19/160 (11%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLR 55
M ++ GLGNP Y RHN GF +D + SF F P K + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDLLVGELDLSFIFSP--KHNAYLRIYKD------ 52
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
IL+KPQT+MNLSG+S+L V NFYK L L++HDDLDL G ++ K GGG+ GHNGL
Sbjct: 53 FILLKPQTYMNLSGESVLSVKNFYKPKEL---LIVHDDLDLPLGVVKFKNGGGNGGHNGL 109
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
KSI C +Y RLR+GI + +I HVL F + E
Sbjct: 110 KSIDLLCSNSYYRLRVGISK---GFNITEHVLSKFHNNEE 146
>gi|154507724|ref|ZP_02043366.1| hypothetical protein ACTODO_00206 [Actinomyces odontolyticus ATCC
17982]
gi|153797358|gb|EDN79778.1| hypothetical protein ACTODO_00206 [Actinomyces odontolyticus ATCC
17982]
Length = 200
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 93/162 (57%), Gaps = 9/162 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL-------DGL 54
++V GLGNPG +Y RHN+G++ +D + S + ++ +L G
Sbjct: 7 WLVVGLGNPGAQYAFTRHNVGYLTLDVLASRGGATLTSHRSRTHTADVRLGIGPGGVPGP 66
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R IL + ++MN SG + + F+K+ + LVIHDD+DL TLRLK GGG+ GHNG
Sbjct: 67 RVILARSDSYMNTSGGPISALATFHKI-DPSRILVIHDDMDLPAHTLRLKVGGGEGGHNG 125
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
LKS+S+ G ++Y RLRIG+GRPP +VL S ER
Sbjct: 126 LKSLSQHLGTRDYARLRIGVGRPPGRMDPADYVLATLPSKER 167
>gi|308050541|ref|YP_003914107.1| peptidyl-tRNA hydrolase [Ferrimonas balearica DSM 9799]
gi|307632731|gb|ADN77033.1| peptidyl-tRNA hydrolase [Ferrimonas balearica DSM 9799]
Length = 198
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 96/176 (54%), Gaps = 10/176 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKF---HAEISEGQLDGLRTIL 58
++ GL NPG EY RHN G + + H + KF I G D LR L
Sbjct: 7 LIVGLANPGPEYAHTRHNAGEWLVKELARAHNVTLKSESKFFGLTGRIQSGSQD-LR--L 63
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+ P TFMNLSG+++ + NFY L E LV HD+LDL G R+K GGG GHNGLK I
Sbjct: 64 LVPTTFMNLSGKAVGAMANFYGL-EPEQILVAHDELDLPPGVARIKQGGGHGGHNGLKDI 122
Query: 119 SEKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ G N + RLRIGIG P D + +VLG +PE+ + +D +RS+ +L
Sbjct: 123 IKALGNNKEFYRLRIGIGHPGDRNRVSGYVLGKAPAPEQRAIDEAVDEASRSIDIL 178
>gi|282858293|ref|ZP_06267478.1| putative peptidyl-tRNA hydrolase [Prevotella bivia JCVIHMP010]
gi|282588924|gb|EFB94044.1| putative peptidyl-tRNA hydrolase [Prevotella bivia JCVIHMP010]
Length = 190
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 92/162 (56%), Gaps = 2/162 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG+EY RHN GFM +D + ++ K + ++E L G + IL+KP
Sbjct: 4 YLICGLGNPGNEYEGTRHNTGFMVLDALAKASNI-VFEDKRYGFVAEFTLKGRKIILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + LVI DD+ L G RLK G + GHNGL +I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENIEQ-SRLLVISDDVALPLGAFRLKGNGSNGGHNGLGNIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G+NY RLR+G+G + VLG+++ + L P ID
Sbjct: 122 IGQNYARLRMGVGNNYPRGGQVDWVLGHYTDEDMKELQPSID 163
>gi|117620789|ref|YP_857655.1| peptidyl-tRNA hydrolase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|166199300|sp|A0KN04|PTH_AERHH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|117562196|gb|ABK39144.1| peptidyl-tRNA hydrolase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 198
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G ++++ +H ++ KF + Q+DG L+ P
Sbjct: 7 LIVGLGNPGPEYAKTRHNAGAWYVEQLARWHNVSLREEPKFFGHTARIQVDGQDVRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK I +
Sbjct: 67 NTYMNLSGKAVAALARFYQI-EPEAMLVAHDELDLPPGIAKFKQGGGHGGHNGLKDIIAR 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLR+GIG P + VL S E+ + +D R+ +L K++
Sbjct: 126 MGNNNNFFRLRLGIGHPGTKELVAGFVLTKAPSSEQSLIDAALDESLRATDILFKQDMTK 185
Query: 180 FLNHIVSVR 188
+N + S +
Sbjct: 186 AMNRLHSFK 194
>gi|15646106|ref|NP_208288.1| peptidyl-tRNA hydrolase [Helicobacter pylori 26695]
gi|2499985|sp|P56077|PTH_HELPY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|2314676|gb|AAD08538.1| peptidyl-tRNA hydrolase (pth) [Helicobacter pylori 26695]
Length = 186
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 102/194 (52%), Gaps = 19/194 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLR 55
M ++ GLGNP Y RHN GF +D + SF F P K +A + +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSP----KHNAFLCVYK----D 52
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
I +KPQT+MNLSG+S+L NFYK L L++HDDLDL G +R K GGG+ GHNGL
Sbjct: 53 FIFLKPQTYMNLSGESVLSAKNFYKTKEL---LIVHDDLDLPLGVVRFKNGGGNGGHNGL 109
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KSI C +Y RLR+GI + +I HVL F E ++ +L +
Sbjct: 110 KSIDLLCSNSYYRLRVGISK---GIGVIEHVLSKFHKNEEPLKNAAFEHAKNALKFFIES 166
Query: 176 EDVSFLNHIVSVRK 189
D + + + +++K
Sbjct: 167 HDFNAMQNRFTLKK 180
>gi|167627809|ref|YP_001678309.1| peptidyl-tRNA hydrolase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189038291|sp|B0TZF5|PTH_FRAP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|167597810|gb|ABZ87808.1| Aminoacyl-tRNA hydrolase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 191
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 100/166 (60%), Gaps = 7/166 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGN G EY RHN+G I +I ++ +F + K + I++ ++ IL+
Sbjct: 6 MIVGLGNIGKEYENTRHNVGEWFIAKIAKDNNENF--SLNSKLNCNIAKVNINYNNIILV 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMN SG ++ +V NFYK+ E LV+HD+LD+D G +RLK GGG GHNGL+SI
Sbjct: 64 FPTTFMNNSGLAVSKVANFYKIE-PEEILVVHDELDIDSGEIRLKKGGGHGGHNGLRSIH 122
Query: 120 EKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
+ G N Y RLRIGIG P + + +VL N S ++ + IDN
Sbjct: 123 QHLGTNDYLRLRIGIGHPGHKSKVSNYVLSNPSVAQKNDIDNAIDN 168
>gi|119505829|ref|ZP_01627895.1| peptidyl-tRNA hydrolase [marine gamma proteobacterium HTCC2080]
gi|119458327|gb|EAW39436.1| peptidyl-tRNA hydrolase [marine gamma proteobacterium HTCC2080]
Length = 200
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN G ++ + + KF+ + + G L++P
Sbjct: 6 LIVGLGNPGKSYEGTRHNAGAFFVEELARQCSSALTTESKFNGDTARINFAGHDLRLLRP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ + NFY++ E L+ HD+LD+ GT R K GGG GHNGL+ I
Sbjct: 66 STFMNKSGLAVAALANFYRIAP-EAILIAHDELDITPGTARFKQGGGHGGHNGLRDIIPA 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + RLR+GIG P + + +VL S +R + I+D SLPLL + + V
Sbjct: 125 LGGNREFHRLRVGIGHPGHASEVSNYVLAKPSKADRQAIDAIVDEAVASLPLLLEGDAVK 184
Query: 180 FLNHIVSV 187
+ + SV
Sbjct: 185 AMTRLHSV 192
>gi|88856043|ref|ZP_01130704.1| peptidyl-tRNA hydrolase [marine actinobacterium PHSC20C1]
gi|88814611|gb|EAR24472.1| peptidyl-tRNA hydrolase [marine actinobacterium PHSC20C1]
Length = 167
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 90/136 (66%), Gaps = 4/136 (2%)
Query: 41 KFHAEISEGQL--DGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDF 98
K +A ++EG+ DG + IL KP +FMNLSG + +M FYK+P +E +V+HD+LD+DF
Sbjct: 18 KANAAVAEGRSFGDGPKLILAKPNSFMNLSGGPVSALMRFYKIP-VERLIVVHDELDIDF 76
Query: 99 GTLRLKTGGGDAGHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYF 157
T++LKTGGG GHNG++ I+ G ++ R+R+GIGRPP VL +FS ER
Sbjct: 77 DTVKLKTGGGHGGHNGIRDIAAAVGSPDFMRVRVGIGRPPGRQPAADFVLRDFSGEERSV 136
Query: 158 LLPIIDNIARSLPLLA 173
L ++ + + ++ LLA
Sbjct: 137 LPNLLTDASDAVVLLA 152
>gi|241668370|ref|ZP_04755948.1| peptidyl-tRNA hydrolase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876903|ref|ZP_05249613.1| peptidyl-tRNA hydrolase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842924|gb|EET21338.1| peptidyl-tRNA hydrolase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 191
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 100/166 (60%), Gaps = 7/166 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGN G EY RHN+G I +I ++ +F + K + I++ ++ IL+
Sbjct: 6 MIVGLGNIGKEYENTRHNVGEWFIAKIAKDNNENF--SLNSKLNCNIAKVNINYNNIILV 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMN SG ++ +V NFYK+ E LV+HD+LD+D G +RLK GGG GHNGL+SI
Sbjct: 64 FPTTFMNNSGLAVSKVANFYKIE-PEEILVVHDELDIDSGEIRLKKGGGHGGHNGLRSIH 122
Query: 120 EKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
+ G N Y RLRIGIG P + + +VL N S ++ + IDN
Sbjct: 123 QHLGTNDYLRLRIGIGHPGHKSKVSNYVLSNPSVAQKNDIDNAIDN 168
>gi|187251695|ref|YP_001876177.1| aminoacyl-tRNA hydrolase [Elusimicrobium minutum Pei191]
gi|226723254|sp|B2KE94|PTH_ELUMP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|186971855|gb|ACC98840.1| Aminoacyl-tRNA hydrolase [Elusimicrobium minutum Pei191]
Length = 187
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 84/159 (52%), Gaps = 6/159 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR--IHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y RHN GFM +D + F A+K E + + G L K
Sbjct: 4 LIVGLGNPGPQYAVTRHNAGFMIVDNLAVKLGVNFNAYKN--LGEYVKTTIGGQDVFLAK 61
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+ + + FYK+ E LV DD+ ++ G +R++ G G NG+K+I E
Sbjct: 62 PLTFMNLSGRMVTHLAGFYKIKPQE-ILVCFDDISINLGAVRIRKDGSAGGQNGMKNIIE 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G ++ RLR G+G P+ +VL FS + L
Sbjct: 121 LFGTQDIPRLRFGVGPKPERFDSADYVLSKFSKSDEKLL 159
>gi|322832992|ref|YP_004213019.1| peptidyl-tRNA hydrolase [Rahnella sp. Y9602]
gi|321168193|gb|ADW73892.1| peptidyl-tRNA hydrolase [Rahnella sp. Y9602]
Length = 191
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 96/175 (54%), Gaps = 8/175 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG EY + RHN G +D R H+ + KF + L G L+
Sbjct: 1 MIVGLANPGAEYAQTRHNAGAWYVDLLARQHNQQL--KEESKFFGYTARLSLAGQDVRLL 58
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMNLSG+++L + FY++ + LV HD+LD+ G ++K GGG+ GHNGLK I
Sbjct: 59 VPTTFMNLSGKAVLAMAQFYRI-EPDEILVAHDELDIPPGMAKIKLGGGNGGHNGLKDIQ 117
Query: 120 EKCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
K G N+ RLRIGIG P D + ++ VLG + E+ + ID R LL
Sbjct: 118 SKFGNNPNFYRLRIGIGHPGDKSKVVGFVLGKPPANEQKLIDDAIDESLRCTELL 172
>gi|300692632|ref|YP_003753627.1| peptidyl-tRNA hydrolase [Ralstonia solanacearum PSI07]
gi|299079692|emb|CBJ52369.1| peptidyl-tRNA hydrolase [Ralstonia solanacearum PSI07]
Length = 200
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 98/180 (54%), Gaps = 12/180 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ H + +FH + L G L++P
Sbjct: 4 LIVGLGNPGAEYAATRHNAGFWLVDQLARMGHVTLRNETRFHGYAARATLWGHEVWLLQP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QTFMN SG + + + FYK LP + LV HD+LDL G ++LK GGG GHNGLK I+
Sbjct: 64 QTFMNRSGLATVALARFYKILP--DEILVAHDELDLPPGAVKLKLGGGSGGHNGLKDIAA 121
Query: 121 K-CGKNYKRLRIGIGR-----PPDTAHIIRHVLGNF--SSPERYFLLPIIDNIARSLPLL 172
+ + RLR+GIG PP TA +H + NF +P R I I RSL L
Sbjct: 122 HLTTQQFWRLRLGIGHPRNLLPPGTAPSGQHDVANFVLKAPRREEQELIDRAIDRSLDAL 181
>gi|307137818|ref|ZP_07497174.1| peptidyl-tRNA hydrolase [Escherichia coli H736]
gi|331641733|ref|ZP_08342868.1| aminoacyl-tRNA hydrolase [Escherichia coli H736]
gi|331038531|gb|EGI10751.1| aminoacyl-tRNA hydrolase [Escherichia coli H736]
Length = 194
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDSLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 171
>gi|330842881|ref|XP_003293397.1| hypothetical protein DICPUDRAFT_41953 [Dictyostelium purpureum]
gi|325076287|gb|EGC30086.1| hypothetical protein DICPUDRAFT_41953 [Dictyostelium purpureum]
Length = 184
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 4/134 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+ GLGNPG +Y + RHN+GF +DRI F K + I + + IL+KP
Sbjct: 1 YILVGLGNPGDKYLDTRHNVGFKVVDRI--CELFEQEKSQKKDNIIKPSKIIKQVILLKP 58
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q FMN SG S+ + + +P EN LV HD++ D G + +K GG + HNG+K I ++
Sbjct: 59 QNFMNRSGASIRNISTEFDVPT-ENILVFHDEITQDTGNIIMKANGGASNHNGVKDIIDR 117
Query: 122 C-GKNYKRLRIGIG 134
+ + R ++G+G
Sbjct: 118 LKTQKFSRFKLGVG 131
>gi|194246618|ref|YP_002004257.1| peptidyl-tRNA hydrolase [Candidatus Phytoplasma mali]
gi|254783882|sp|B3QZM3|PTH_PHYMT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|193806975|emb|CAP18410.1| Peptidyl-tRNA hydrolase [Candidatus Phytoplasma mali]
Length = 176
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 98/180 (54%), Gaps = 21/180 (11%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG Y HNIGFM ID +++ KK ++ I + + + +
Sbjct: 1 MKLIVGLGNPGQNYQFTLHNIGFMMIDYLLNTIITDKKIVKKHNSYIYKANVGSNLVLFV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MN SG ++ +++N YK+ L + LV+ DD+ L G +LK GG GHNGL++I
Sbjct: 61 KPQTYMNSSGHAVKKILNEYKII-LNDLLVLSDDIYLPEGNYKLKLKGGHGGHNGLRNII 119
Query: 120 EKC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN----IARSLPLLA 173
+ C K +KRL+IG+ + + S E Y L PI D + +S P+++
Sbjct: 120 D-CLQTKKFKRLKIGVSQDHNI------------SLEDYLLTPIDDKKKLMVQKSFPIIS 166
>gi|71909344|ref|YP_286931.1| peptidyl-tRNA hydrolase [Dechloromonas aromatica RCB]
gi|119390931|sp|Q479M0|PTH_DECAR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71848965|gb|AAZ48461.1| peptidyl-tRNA hydrolase [Dechloromonas aromatica RCB]
Length = 192
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 100/170 (58%), Gaps = 9/170 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN+GF +D++ A + KF + T L++P
Sbjct: 6 LIVGLGNPGPEYEATRHNVGFWFVDQLADKLKVSLAPQAKFFGRAARTG----ETWLLQP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ++ + NFYK+P + LVIHD+LDL G +RLK GGG+ GHNGLK I K
Sbjct: 62 TTFMNRSGQAVAALANFYKIPA-DEILVIHDELDLPPGGIRLKQGGGNGGHNGLKDIQAK 120
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN-IARSL 169
G ++ RLR+GIG P T ++ + V+ R LP I++ +AR L
Sbjct: 121 LGTPDFWRLRLGIGH-PRTLNLSQQVVDFVLHQPRKEELPDIEHALARCL 169
>gi|238751555|ref|ZP_04613046.1| Peptidyl-tRNA hydrolase [Yersinia rohdei ATCC 43380]
gi|238710273|gb|EEQ02500.1| Peptidyl-tRNA hydrolase [Yersinia rohdei ATCC 43380]
Length = 196
Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 99/190 (52%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEESKFFGYTARLNLAGQDIRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG+++ + FY+ LP E LV HD+LD+ G ++K GGG+ GHNGLK I
Sbjct: 66 STFMNLSGKAVAAMAGFYRILP--EEILVAHDELDIPPGVAKMKLGGGNGGHNGLKDIQS 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N+ RLRIGIG P D + + VLG + E+ + ID R +L
Sbjct: 124 KLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQALIDDTIDESIRCTEILLTEGIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|330445225|ref|ZP_08308877.1| peptidyl-tRNA hydrolase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489416|dbj|GAA03374.1| peptidyl-tRNA hydrolase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 196
Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 95/177 (53%), Gaps = 8/177 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG EY RHN G ++ R+H+ P K+ ++G L+
Sbjct: 7 LLVGLANPGQEYARTRHNAGAWVVEELARVHNVTLRP--DPKYFGLTGRITVNGQDLRLL 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMNLSG+S+ + NF+++ E LV HD+LDL G + K GGG GHNGL+ I
Sbjct: 65 IPTTFMNLSGKSVAALANFFQI-KPEEILVAHDELDLPPGVAKFKKGGGHGGHNGLRDII 123
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
K G K++ RLRI IG P D + +VLG + E+ + +D R + LL K
Sbjct: 124 SKMGNNKDFYRLRIAIGHPGDKNKVAGYVLGKAPAKEQELIDAAVDESVRCIDLLLK 180
>gi|114626795|ref|XP_001150716.1| PREDICTED: peptidyl-tRNA hydrolase 1 homolog isoform 2 [Pan
troglodytes]
Length = 221
Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 91/185 (49%), Gaps = 18/185 (9%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFH--AEISEGQLDGLRTILIK 60
VAGLGNPG RH++G + ++ +W + H A+++ L + +L++
Sbjct: 40 VAGLGNPG--LPGTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVLLR 97
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ MN +G+S+ + L E YLV HD+LD G L LK GG GHNG++S
Sbjct: 98 PRRLMNANGRSVARAAELFGLTAEEVYLV-HDELDKPLGRLALKLGGSARGHNGVRSCIS 156
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
N RLR+GIGRP + HVLG FS E+ LPLL R
Sbjct: 157 CLNSNAMPRLRVGIGRPAHPEAVQAHVLGCFSPAEQEL-----------LPLLLDRATDL 205
Query: 180 FLNHI 184
L+HI
Sbjct: 206 ILDHI 210
>gi|296161526|ref|ZP_06844331.1| peptidyl-tRNA hydrolase [Burkholderia sp. Ch1-1]
gi|295888170|gb|EFG67983.1| peptidyl-tRNA hydrolase [Burkholderia sp. Ch1-1]
Length = 200
Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 87/139 (62%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLAREAGTTLRDERRFHGFYAKARLHGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ V F+K LP+ LV HD+LD+ G+++LK GGG GHNGLK I+
Sbjct: 64 QTYMNRSGQSVVAVAQFFKILPD--EILVAHDELDMPPGSVKLKLGGGSGGHNGLKDITA 121
Query: 121 K-CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 122 HLSSQQYWRLRIGIGHPRD 140
>gi|149038990|gb|EDL93210.1| rCG45678, isoform CRA_b [Rattus norvegicus]
Length = 204
Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 89/167 (53%), Gaps = 7/167 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKK--KFHAEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + +I W + + A+++ + +L
Sbjct: 21 WLVAGLGNPGMPG--TRHSVGMAVLGQIAQRLGVAENWARDSRCAADLALAPFGDAQLVL 78
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS- 117
++P+ MN++G+S+ + + L E YLV HD+LD G L LK GG GHNG++S
Sbjct: 79 LRPRRLMNVNGRSVAKAAELFGLSAEEIYLV-HDELDKPLGKLALKLGGSARGHNGVRSC 137
Query: 118 ISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
IS RL +GIGRP + HVLG FS E+ L P++D
Sbjct: 138 ISCLNSNAMPRLLVGIGRPTHPNMVETHVLGCFSPEEQELLSPLMDQ 184
>gi|15612455|ref|NP_224108.1| peptidyl-tRNA hydrolase [Helicobacter pylori J99]
gi|7388027|sp|Q9ZJC3|PTH_HELPJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|4156010|gb|AAD06971.1| PEPTIDYL-TRNA HYDROLASE [Helicobacter pylori J99]
Length = 186
Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 91/160 (56%), Gaps = 19/160 (11%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLR 55
M ++ GLGNP Y RHN GF +D + SF F P K +A + +
Sbjct: 1 MTLLVGLGNPTLRYDHTRHNAGFDILDSLVSELDLSFIFSP----KHNAYLCVYK----D 52
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
IL+KPQT+MNLSG+S+L NFYK L L++HDDLDL G ++ K GGG+ GHNGL
Sbjct: 53 FILLKPQTYMNLSGESVLSAKNFYKTKEL---LIVHDDLDLPLGVVKFKKGGGNGGHNGL 109
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
KSI C +Y RLR+GI + +I HVL F + E
Sbjct: 110 KSIDALCSNSYYRLRVGISK---GINITEHVLSKFHNNEE 146
>gi|170691506|ref|ZP_02882671.1| Aminoacyl-tRNA hydrolase [Burkholderia graminis C4D1M]
gi|170143711|gb|EDT11874.1| Aminoacyl-tRNA hydrolase [Burkholderia graminis C4D1M]
Length = 200
Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 87/139 (62%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLARDAGTTLRDERRFHGFYAKARLHGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ V F+K LP+ LV HD+LD+ G+++LK GGG GHNGLK I+
Sbjct: 64 QTYMNRSGQSVVAVAQFFKILPD--EILVAHDELDMPPGSVKLKLGGGSGGHNGLKDITA 121
Query: 121 K-CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 122 HLSSQQYWRLRIGIGHPRD 140
>gi|317152593|ref|YP_004120641.1| peptidyl-tRNA hydrolase [Desulfovibrio aespoeensis Aspo-2]
gi|316942844|gb|ADU61895.1| peptidyl-tRNA hydrolase [Desulfovibrio aespoeensis Aspo-2]
Length = 210
Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 105/193 (54%), Gaps = 15/193 (7%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD---------G 53
++ GLGNPG +Y + RHNIGFM + S A +K H E E D G
Sbjct: 6 VIVGLGNPGPKYEKTRHNIGFMLVG---SLLATGAGRKSMHLERLEESGDYELWQVKFGG 62
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
+L KPQT+MNLSG+++ + + + + +V+HD+LDL G ++LK GGG+ GHN
Sbjct: 63 AFRLLAKPQTYMNLSGKAVARICGRHGI-TPDAVMVVHDELDLSVGRIKLKQGGGNNGHN 121
Query: 114 GLKSISEKCGK-NYKRLRIGIGRPPDT-AHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
GLKSI E G ++ RLRIGIGRP A I VL FS + + I+ + + L L
Sbjct: 122 GLKSIEECLGTPDFHRLRIGIGRPATQYADISGWVLEPFSDADAAHIPAILAHAIKGLDL 181
Query: 172 LAKREDVSFLNHI 184
+R + HI
Sbjct: 182 FYRRGPAFAVQHI 194
>gi|261340158|ref|ZP_05968016.1| aminoacyl-tRNA hydrolase [Enterobacter cancerogenus ATCC 35316]
gi|288317673|gb|EFC56611.1| aminoacyl-tRNA hydrolase [Enterobacter cancerogenus ATCC 35316]
Length = 194
Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 90/168 (53%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF+ S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFYGYTSRINLAGADVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMATFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLR+GIG P D ++ VLG E+ + +D R
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAVDEAVR 171
>gi|52424611|ref|YP_087748.1| peptidyl-tRNA hydrolase [Mannheimia succiniciproducens MBEL55E]
gi|68052916|sp|Q65V47|PTH_MANSM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|52306663|gb|AAU37163.1| Pth protein [Mannheimia succiniciproducens MBEL55E]
Length = 194
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 97/175 (55%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G ++R+ F+F + KF + + + G + P
Sbjct: 6 LIVGLGNPGDKYADTRHNAGEWLVERLARRFNFNLKDEAKFFGKTARAVIGGEEVRFLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E LVIHD+LDL G ++K GGG GHNGLK +
Sbjct: 66 TTFMNLSGKAVGALATFYRI-KPEEILVIHDELDLPPGVAKIKQGGGHGGHNGLKDTIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
KN+ RLRIGIG P D + +VL S +R + +D A + +L K
Sbjct: 125 LANNKNFYRLRIGIGHPGDKNLVSAYVLSKPSPIDRSAIDKALDEAASCMEILLK 179
>gi|253688506|ref|YP_003017696.1| peptidyl-tRNA hydrolase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259535213|sp|C6DHY7|PTH_PECCP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|251755084|gb|ACT13160.1| peptidyl-tRNA hydrolase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 195
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 99/185 (53%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +DR+ + P + KF S L G L+ P
Sbjct: 6 LIVGLANPGAEYAATRHNAGAWFVDRLADAYRQPLKEESKFFGYTSRLNLAGQDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ + LV HD+LDL G +LK GGG GHNGLK I K
Sbjct: 66 TTFMNLSGKAVAAMATFYRI-QPDEILVAHDELDLLPGIAKLKLGGGHGGHNGLKDIISK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P D + + VLG + E+ + ID R +L K + +
Sbjct: 125 LGNNPNFHRLRIGIGHPGDKSKVTGFVLGKPPTSEQTLIDDAIDEAVRCTEILMKEDMIK 184
Query: 180 FLNHI 184
+N +
Sbjct: 185 AMNRL 189
>gi|227111323|ref|ZP_03824979.1| peptidyl-tRNA hydrolase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|227329559|ref|ZP_03833583.1| peptidyl-tRNA hydrolase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 195
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 99/185 (53%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +DR+ + P + KF S L G L+ P
Sbjct: 6 LIVGLANPGAEYAATRHNAGAWFVDRLADAYRQPLKEESKFFGYTSRLNLAGQDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ + LV HD+LDL G +LK GGG GHNGLK I K
Sbjct: 66 TTFMNLSGKAVAAMATFYRI-QPDEILVAHDELDLLPGIAKLKLGGGHGGHNGLKDIISK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P D + + VLG + E+ + ID R +L K + +
Sbjct: 125 LGNNPNFHRLRIGIGHPGDKSKVTGFVLGKPPTSEQTLIDDAIDEAVRCTEILMKEDMIK 184
Query: 180 FLNHI 184
+N +
Sbjct: 185 AMNRL 189
>gi|115453001|ref|NP_001050101.1| Os03g0347800 [Oryza sativa Japonica Group]
gi|122247022|sp|Q10LI6|CRS2L_ORYSJ RecName: Full=CRS2-like protein, chloroplastic; AltName:
Full=Chloroplastic RNA splicing factor 2-like protein;
Flags: Precursor
gi|108708119|gb|ABF95914.1| Peptidyl-tRNA hydrolase, putative, expressed [Oryza sativa Japonica
Group]
gi|113548572|dbj|BAF12015.1| Os03g0347800 [Oryza sativa Japonica Group]
gi|215707163|dbj|BAG93623.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 186
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GF ID + F A EG ++G+ +L KP
Sbjct: 61 WLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLAKP 120
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
QT+MNLSG+S+ + +YKLP L LV DD+DL G LRL+ GG HNG
Sbjct: 121 QTYMNLSGESVGPLAAYYKLP-LNRVLVAFDDMDLPCGVLRLQPKGGYGRHNG 172
>gi|307638153|gb|ADN80603.1| Peptidyl-tRNA hydrolase [Helicobacter pylori 908]
gi|325996752|gb|ADZ52157.1| Peptidyl-tRNA hydrolase [Helicobacter pylori 2018]
gi|325998347|gb|ADZ50555.1| Peptidyl-tRNA hydrolase [Helicobacter pylori 2017]
Length = 186
Score = 94.0 bits (232), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSSKHNAYLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK L L++HDDLDL G ++ K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYKPKEL---LIVHDDLDLPLGVVKFKKGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F + E ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GFNITEHVLSKFHNNEEPLKNAAFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|194434913|ref|ZP_03067158.1| peptidyl-tRNA hydrolase [Shigella dysenteriae 1012]
gi|194416846|gb|EDX32970.1| peptidyl-tRNA hydrolase [Shigella dysenteriae 1012]
Length = 194
Score = 94.0 bits (232), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNTGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 171
>gi|325983635|ref|YP_004296037.1| peptidyl-tRNA hydrolase [Nitrosomonas sp. AL212]
gi|325533154|gb|ADZ27875.1| peptidyl-tRNA hydrolase [Nitrosomonas sp. AL212]
Length = 189
Score = 94.0 bits (232), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 102/177 (57%), Gaps = 5/177 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG EY RHN GF +DR+ P + +FH ++ + + L+
Sbjct: 1 MKLIVGLGNPGREYAGTRHNAGFEWVDRLSQMLHAPLKAEVRFHGLCTQIRQKDIDLWLL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+PQTFMN SGQ+++ + FYK LP+ +V+HD+LDL G +LK GGG GHNGLK I
Sbjct: 61 EPQTFMNRSGQAVVALCQFYKILPD--EIIVVHDELDLPPGIAKLKKGGGLGGHNGLKDI 118
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ + G +++ RLRIGIG P D ++ +VL E + I PL+A+
Sbjct: 119 AARLGTQDFWRLRIGIGHPGDRNAVVGYVLHPPRKEETSLIDEAIQKSLEVWPLIAQ 175
>gi|332173411|gb|AEE22665.1| peptidyl-tRNA hydrolase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 194
Score = 94.0 bits (232), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 5/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G ++ + H + + KF + G L+ P
Sbjct: 6 LIVGLGNPGLEYKYTRHNAGTWLVENLARMHNCTLSLQSKFFGYTGRVTIGGQDIRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++P E+ LV +D+LDL G + K G + NG++ I
Sbjct: 66 TTYMNKSGQAVAALAGFYRIPP-ESILVAYDELDLPPGIAKFKF-SGSSSQNGIRDIVSS 123
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLR+GIG P + +VLG + E+ + ID R + +L K +
Sbjct: 124 LGNNKDFYRLRVGIGHPGHKGKVSGYVLGKAPAKEQEQMDAAIDEGVRCVEILIKDDLKK 183
Query: 180 FLNHIVSVR 188
+N + S +
Sbjct: 184 AMNRLHSFK 192
>gi|209519641|ref|ZP_03268431.1| Aminoacyl-tRNA hydrolase [Burkholderia sp. H160]
gi|209499927|gb|EDZ99992.1| Aminoacyl-tRNA hydrolase [Burkholderia sp. H160]
Length = 201
Score = 94.0 bits (232), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 87/139 (62%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLTRETGTTLRDERRFHGFYAKARLHGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ + F+K LP+ LV HD+LD+ G+++LK GGG GHNGLK IS
Sbjct: 64 QTYMNRSGQSVVALAQFFKILPD--EILVAHDELDMPPGSVKLKLGGGSGGHNGLKDISA 121
Query: 121 K-CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 122 HLSSQQYWRLRIGIGHPRD 140
>gi|330961720|gb|EGH61980.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 194
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 96/173 (55%), Gaps = 8/173 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY + RHN G + ++RI + + P ++KF G L+
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGALFVERIAAAQRVNLVP--ERKFFGLTGRFAHQGQDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LKTGGG GHNGL+ I
Sbjct: 64 IPTTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKTGGGHGGHNGLRDII 122
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ G + RLR+GIG P D + + VLG E+ L ID LP
Sbjct: 123 AQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|283785507|ref|YP_003365372.1| Peptidyl-tRNA hydrolase [Citrobacter rodentium ICC168]
gi|282948961|emb|CBG88564.1| Peptidyl-tRNA hydrolase [Citrobacter rodentium ICC168]
Length = 194
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEAKFFGYTSRVTLAGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVGAMASFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLR+GIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 171
>gi|187927355|ref|YP_001897842.1| peptidyl-tRNA hydrolase [Ralstonia pickettii 12J]
gi|309779944|ref|ZP_07674698.1| aminoacyl-tRNA hydrolase [Ralstonia sp. 5_7_47FAA]
gi|238691838|sp|B2UER4|PTH_RALPJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|187724245|gb|ACD25410.1| Aminoacyl-tRNA hydrolase [Ralstonia pickettii 12J]
gi|308921303|gb|EFP66946.1| aminoacyl-tRNA hydrolase [Ralstonia sp. 5_7_47FAA]
Length = 200
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ + + +FH + L G L++P
Sbjct: 4 LIVGLGNPGAEYAATRHNAGFWLVDQLARMGNVTLRNETRFHGYAARANLWGNEVWLLQP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QTFMN SG + + + FYK +P + LV+HD+LDL GT++LK GGG GHNGLK I+
Sbjct: 64 QTFMNRSGLATVALARFYKVMP--DEILVVHDELDLPPGTVKLKLGGGSGGHNGLKDIAA 121
Query: 121 K-CGKNYKRLRIGIGR-----PPDTAHIIRHVLGNF 150
+ + RLR+GIG PP TA +H + NF
Sbjct: 122 HLTTQQFWRLRLGIGHPRNLLPPGTAASGQHDVANF 157
>gi|269957487|ref|YP_003327276.1| peptidyl-tRNA hydrolase [Xylanimonas cellulosilytica DSM 15894]
gi|269306168|gb|ACZ31718.1| peptidyl-tRNA hydrolase [Xylanimonas cellulosilytica DSM 15894]
Length = 202
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 113/184 (61%), Gaps = 18/184 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS-----FHFFPAWKKKFHAEISEGQLD---- 52
++V GLGNPG +Y NRHN+G M +D + F P + A + EG+L
Sbjct: 6 WLVVGLGNPGAQYAGNRHNVGQMVLDLLAERAGARFSRHP----RAQAVVGEGRLGVLPG 61
Query: 53 ---GLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGD 109
G R ++ KP T+MN+SG + + +Y + + ++ +V+HD++D+ F T++LKTGGG+
Sbjct: 62 GRPGPRVVVAKPTTYMNVSGGPVANLAKYYGI-DADHVVVVHDEVDIPFDTIKLKTGGGE 120
Query: 110 AGHNGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
GHNGL+ IS+ G ++Y R+R+G+GRPP +VL +F+ PER L ++D+ A +
Sbjct: 121 GGHNGLRDISKALGTRDYVRVRVGVGRPPGRMDTADYVLRDFAGPERKDLPILLDDAADA 180
Query: 169 LPLL 172
+ ++
Sbjct: 181 VEMV 184
>gi|224583728|ref|YP_002637526.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224468255|gb|ACN46085.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 202
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L+G L+ P
Sbjct: 13 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVP 72
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ +++FY++ + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 73 TTFMNLSGKAVGAMVSFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 131
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 132 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFK 186
>gi|119364640|sp|Q57NM8|PTH_SALCH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 194
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L+G L+ P
Sbjct: 5 LIVGLANPGTEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ +++FY++ + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVGAMVSFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFK 178
>gi|311246504|ref|XP_003122235.1| PREDICTED: probable peptidyl-tRNA hydrolase-like [Sus scrofa]
Length = 341
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 91/168 (54%), Gaps = 11/168 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKK--KFHAEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W + + A+++ L + +L
Sbjct: 158 WLVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWARDARCAADLALASLGDAQVVL 215
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN +G+S+ + L E YLV HD+LD G L LK GG GHNG++S
Sbjct: 216 LRPRRLMNNNGRSVARAAELFGLTAEEVYLV-HDELDKPLGKLALKLGGSARGHNGVRSC 274
Query: 119 SEKCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIID 163
N RLR+GIGRP PDT +VLG FS E+ L P+++
Sbjct: 275 ISCLNSNAMPRLRVGIGRPTHPDTVQA--YVLGRFSLAEQELLPPLLE 320
>gi|15801433|ref|NP_287450.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 EDL933]
gi|15830963|ref|NP_309736.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. Sakai]
gi|16129167|ref|NP_415722.1| peptidyl-tRNA hydrolase [Escherichia coli str. K-12 substr. MG1655]
gi|26247527|ref|NP_753567.1| peptidyl-tRNA hydrolase [Escherichia coli CFT073]
gi|74312456|ref|YP_310875.1| peptidyl-tRNA hydrolase [Shigella sonnei Ss046]
gi|89108049|ref|AP_001829.1| peptidyl-tRNA hydrolase [Escherichia coli str. K-12 substr. W3110]
gi|91210425|ref|YP_540411.1| peptidyl-tRNA hydrolase [Escherichia coli UTI89]
gi|110641434|ref|YP_669164.1| peptidyl-tRNA hydrolase [Escherichia coli 536]
gi|110805209|ref|YP_688729.1| peptidyl-tRNA hydrolase [Shigella flexneri 5 str. 8401]
gi|157156333|ref|YP_001462456.1| peptidyl-tRNA hydrolase [Escherichia coli E24377A]
gi|157160709|ref|YP_001458027.1| peptidyl-tRNA hydrolase [Escherichia coli HS]
gi|168750763|ref|ZP_02775785.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4113]
gi|168756565|ref|ZP_02781572.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4401]
gi|168764412|ref|ZP_02789419.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4501]
gi|168771091|ref|ZP_02796098.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4486]
gi|168782558|ref|ZP_02807565.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4076]
gi|168787706|ref|ZP_02812713.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC869]
gi|168802106|ref|ZP_02827113.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC508]
gi|170020429|ref|YP_001725383.1| peptidyl-tRNA hydrolase [Escherichia coli ATCC 8739]
gi|170080832|ref|YP_001730152.1| peptidyl-tRNA hydrolase [Escherichia coli str. K-12 substr. DH10B]
gi|170681473|ref|YP_001743990.1| peptidyl-tRNA hydrolase [Escherichia coli SMS-3-5]
gi|188494692|ref|ZP_03001962.1| peptidyl-tRNA hydrolase [Escherichia coli 53638]
gi|191168523|ref|ZP_03030309.1| peptidyl-tRNA hydrolase [Escherichia coli B7A]
gi|191171008|ref|ZP_03032559.1| peptidyl-tRNA hydrolase [Escherichia coli F11]
gi|193066741|ref|ZP_03047766.1| peptidyl-tRNA hydrolase [Escherichia coli E22]
gi|193071180|ref|ZP_03052103.1| peptidyl-tRNA hydrolase [Escherichia coli E110019]
gi|194425799|ref|ZP_03058355.1| peptidyl-tRNA hydrolase [Escherichia coli B171]
gi|194437104|ref|ZP_03069203.1| peptidyl-tRNA hydrolase [Escherichia coli 101-1]
gi|195938853|ref|ZP_03084235.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4024]
gi|208806611|ref|ZP_03248948.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4206]
gi|208815492|ref|ZP_03256671.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4045]
gi|208822157|ref|ZP_03262476.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4042]
gi|209398573|ref|YP_002270138.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4115]
gi|209918445|ref|YP_002292529.1| peptidyl-tRNA hydrolase [Escherichia coli SE11]
gi|215486436|ref|YP_002328867.1| peptidyl-tRNA hydrolase [Escherichia coli O127:H6 str. E2348/69]
gi|217328364|ref|ZP_03444446.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. TW14588]
gi|218553758|ref|YP_002386671.1| peptidyl-tRNA hydrolase [Escherichia coli IAI1]
gi|218558133|ref|YP_002391046.1| peptidyl-tRNA hydrolase [Escherichia coli S88]
gi|218689151|ref|YP_002397363.1| peptidyl-tRNA hydrolase [Escherichia coli ED1a]
gi|218694718|ref|YP_002402385.1| peptidyl-tRNA hydrolase [Escherichia coli 55989]
gi|218699911|ref|YP_002407540.1| peptidyl-tRNA hydrolase [Escherichia coli IAI39]
gi|227886374|ref|ZP_04004179.1| aminoacyl-tRNA hydrolase [Escherichia coli 83972]
gi|237705166|ref|ZP_04535647.1| peptidyl-tRNA hydrolase [Escherichia sp. 3_2_53FAA]
gi|238900435|ref|YP_002926231.1| peptidyl-tRNA hydrolase [Escherichia coli BW2952]
gi|253773797|ref|YP_003036628.1| peptidyl-tRNA hydrolase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254161286|ref|YP_003044394.1| peptidyl-tRNA hydrolase [Escherichia coli B str. REL606]
gi|254792674|ref|YP_003077511.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. TW14359]
gi|256018546|ref|ZP_05432411.1| peptidyl-tRNA hydrolase [Shigella sp. D9]
gi|256023119|ref|ZP_05436984.1| peptidyl-tRNA hydrolase [Escherichia sp. 4_1_40B]
gi|260843496|ref|YP_003221274.1| peptidyl-tRNA hydrolase [Escherichia coli O103:H2 str. 12009]
gi|260854865|ref|YP_003228756.1| peptidyl-tRNA hydrolase [Escherichia coli O26:H11 str. 11368]
gi|260867609|ref|YP_003234011.1| peptidyl-tRNA hydrolase [Escherichia coli O111:H- str. 11128]
gi|261224936|ref|ZP_05939217.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. FRIK2000]
gi|261257207|ref|ZP_05949740.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. FRIK966]
gi|291282229|ref|YP_003499047.1| Peptidyl-tRNA hydrolase [Escherichia coli O55:H7 str. CB9615]
gi|293409591|ref|ZP_06653167.1| peptidyl-tRNA hydrolase [Escherichia coli B354]
gi|293414481|ref|ZP_06657130.1| peptidyl-tRNA hydrolase [Escherichia coli B185]
gi|293433520|ref|ZP_06661948.1| peptidyl-tRNA hydrolase [Escherichia coli B088]
gi|297516813|ref|ZP_06935199.1| peptidyl-tRNA hydrolase [Escherichia coli OP50]
gi|300816895|ref|ZP_07097115.1| peptidyl-tRNA hydrolase [Escherichia coli MS 107-1]
gi|300821026|ref|ZP_07101175.1| peptidyl-tRNA hydrolase [Escherichia coli MS 119-7]
gi|300921830|ref|ZP_07137987.1| peptidyl-tRNA hydrolase [Escherichia coli MS 182-1]
gi|300928250|ref|ZP_07143787.1| peptidyl-tRNA hydrolase [Escherichia coli MS 187-1]
gi|300939560|ref|ZP_07154217.1| peptidyl-tRNA hydrolase [Escherichia coli MS 21-1]
gi|300951671|ref|ZP_07165495.1| peptidyl-tRNA hydrolase [Escherichia coli MS 116-1]
gi|300955603|ref|ZP_07167961.1| peptidyl-tRNA hydrolase [Escherichia coli MS 175-1]
gi|300971927|ref|ZP_07171715.1| peptidyl-tRNA hydrolase [Escherichia coli MS 45-1]
gi|300996001|ref|ZP_07181335.1| peptidyl-tRNA hydrolase [Escherichia coli MS 200-1]
gi|301017236|ref|ZP_07182017.1| peptidyl-tRNA hydrolase [Escherichia coli MS 69-1]
gi|301029494|ref|ZP_07192575.1| peptidyl-tRNA hydrolase [Escherichia coli MS 196-1]
gi|301046853|ref|ZP_07193970.1| peptidyl-tRNA hydrolase [Escherichia coli MS 185-1]
gi|301327080|ref|ZP_07220362.1| peptidyl-tRNA hydrolase [Escherichia coli MS 78-1]
gi|301648143|ref|ZP_07247896.1| peptidyl-tRNA hydrolase [Escherichia coli MS 146-1]
gi|306813898|ref|ZP_07448071.1| peptidyl-tRNA hydrolase [Escherichia coli NC101]
gi|307310041|ref|ZP_07589691.1| peptidyl-tRNA hydrolase [Escherichia coli W]
gi|312966444|ref|ZP_07780666.1| peptidyl-tRNA hydrolase [Escherichia coli 2362-75]
gi|312971391|ref|ZP_07785566.1| peptidyl-tRNA hydrolase [Escherichia coli 1827-70]
gi|331646522|ref|ZP_08347625.1| aminoacyl-tRNA hydrolase [Escherichia coli M605]
gi|331657255|ref|ZP_08358217.1| aminoacyl-tRNA hydrolase [Escherichia coli TA206]
gi|331667588|ref|ZP_08368452.1| aminoacyl-tRNA hydrolase [Escherichia coli TA271]
gi|331672739|ref|ZP_08373525.1| aminoacyl-tRNA hydrolase [Escherichia coli TA280]
gi|331676984|ref|ZP_08377680.1| aminoacyl-tRNA hydrolase [Escherichia coli H591]
gi|331682693|ref|ZP_08383312.1| aminoacyl-tRNA hydrolase [Escherichia coli H299]
gi|67471520|sp|P0A7D1|PTH_ECOLI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|67471521|sp|P0A7D2|PTH_ECOL6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|67471524|sp|P0A7D3|PTH_ECO57 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390937|sp|Q0TIG6|PTH_ECOL5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390938|sp|Q1RCN4|PTH_ECOUT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391008|sp|Q3Z0S2|PTH_SHISS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|122957492|sp|Q0T5J1|PTH_SHIF8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|167011992|sp|A7ZKX7|PTH_ECO24 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|167011993|sp|A7ZZE0|PTH_ECOHS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038290|sp|B1IU89|PTH_ECOLC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226694252|sp|B5YXM2|PTH_ECO5E RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226694253|sp|B6I9R9|PTH_ECOSE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226723249|sp|B7MKA6|PTH_ECO45 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226723250|sp|B7NUX0|PTH_ECO7I RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226723251|sp|B7LXB9|PTH_ECO8A RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226723253|sp|B1LH96|PTH_ECOSM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|229470296|sp|B1XAP5|PTH_ECODH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783867|sp|B7UQ92|PTH_ECO27 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783868|sp|B7LGW4|PTH_ECO55 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783869|sp|B7MTY8|PTH_ECO81 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|259535173|sp|C4ZTP5|PTH_ECOBW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|12514917|gb|AAG56062.1|AE005338_2 peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EDL933]
gi|26107928|gb|AAN80127.1|AE016759_401 Peptidyl-tRNA hydrolase [Escherichia coli CFT073]
gi|581202|emb|CAA43945.1| peptidyl-tRNA hydrolase [Escherichia coli K-12]
gi|1651597|dbj|BAA36062.1| peptidyl-tRNA hydrolase [Escherichia coli str. K12 substr. W3110]
gi|1787455|gb|AAC74288.1| peptidyl-tRNA hydrolase [Escherichia coli str. K-12 substr. MG1655]
gi|13361174|dbj|BAB35132.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. Sakai]
gi|73855933|gb|AAZ88640.1| peptidyl-tRNA hydrolase [Shigella sonnei Ss046]
gi|91071999|gb|ABE06880.1| peptidyl-tRNA hydrolase [Escherichia coli UTI89]
gi|110343026|gb|ABG69263.1| peptidyl-tRNA hydrolase [Escherichia coli 536]
gi|110614757|gb|ABF03424.1| peptidyl-tRNA hydrolase [Shigella flexneri 5 str. 8401]
gi|157066389|gb|ABV05644.1| peptidyl-tRNA hydrolase [Escherichia coli HS]
gi|157078363|gb|ABV18071.1| peptidyl-tRNA hydrolase [Escherichia coli E24377A]
gi|169755357|gb|ACA78056.1| Aminoacyl-tRNA hydrolase [Escherichia coli ATCC 8739]
gi|169888667|gb|ACB02374.1| peptidyl-tRNA hydrolase [Escherichia coli str. K-12 substr. DH10B]
gi|170519191|gb|ACB17369.1| peptidyl-tRNA hydrolase [Escherichia coli SMS-3-5]
gi|188015067|gb|EDU53189.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4113]
gi|188489891|gb|EDU64994.1| peptidyl-tRNA hydrolase [Escherichia coli 53638]
gi|188999990|gb|EDU68976.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4076]
gi|189356406|gb|EDU74825.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4401]
gi|189360056|gb|EDU78475.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4486]
gi|189365581|gb|EDU83997.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4501]
gi|189372477|gb|EDU90893.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC869]
gi|189375858|gb|EDU94274.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC508]
gi|190901421|gb|EDV61184.1| peptidyl-tRNA hydrolase [Escherichia coli B7A]
gi|190908740|gb|EDV68328.1| peptidyl-tRNA hydrolase [Escherichia coli F11]
gi|192925611|gb|EDV80280.1| peptidyl-tRNA hydrolase [Escherichia coli E22]
gi|192955512|gb|EDV85992.1| peptidyl-tRNA hydrolase [Escherichia coli E110019]
gi|194415854|gb|EDX32120.1| peptidyl-tRNA hydrolase [Escherichia coli B171]
gi|194424087|gb|EDX40075.1| peptidyl-tRNA hydrolase [Escherichia coli 101-1]
gi|208726412|gb|EDZ76013.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4206]
gi|208732140|gb|EDZ80828.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4045]
gi|208737642|gb|EDZ85325.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4042]
gi|209159973|gb|ACI37406.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4115]
gi|209772598|gb|ACI84611.1| peptidyl-tRNA hydrolase [Escherichia coli]
gi|209772600|gb|ACI84612.1| peptidyl-tRNA hydrolase [Escherichia coli]
gi|209772602|gb|ACI84613.1| peptidyl-tRNA hydrolase [Escherichia coli]
gi|209772604|gb|ACI84614.1| peptidyl-tRNA hydrolase [Escherichia coli]
gi|209772606|gb|ACI84615.1| peptidyl-tRNA hydrolase [Escherichia coli]
gi|209911704|dbj|BAG76778.1| peptidyl-tRNA hydrolase [Escherichia coli SE11]
gi|215264508|emb|CAS08875.1| peptidyl-tRNA hydrolase [Escherichia coli O127:H6 str. E2348/69]
gi|217318791|gb|EEC27217.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. TW14588]
gi|218351450|emb|CAU97158.1| peptidyl-tRNA hydrolase [Escherichia coli 55989]
gi|218360526|emb|CAQ98084.1| peptidyl-tRNA hydrolase [Escherichia coli IAI1]
gi|218364902|emb|CAR02598.1| peptidyl-tRNA hydrolase [Escherichia coli S88]
gi|218369897|emb|CAR17672.1| peptidyl-tRNA hydrolase [Escherichia coli IAI39]
gi|218426715|emb|CAR07552.1| peptidyl-tRNA hydrolase [Escherichia coli ED1a]
gi|222033003|emb|CAP75743.1| Peptidyl-tRNA hydrolase [Escherichia coli LF82]
gi|226899923|gb|EEH86182.1| peptidyl-tRNA hydrolase [Escherichia sp. 3_2_53FAA]
gi|227836578|gb|EEJ47044.1| aminoacyl-tRNA hydrolase [Escherichia coli 83972]
gi|238861995|gb|ACR63993.1| peptidyl-tRNA hydrolase [Escherichia coli BW2952]
gi|242376983|emb|CAQ31706.1| peptidyl-tRNA hydrolase [Escherichia coli BL21(DE3)]
gi|253324841|gb|ACT29443.1| peptidyl-tRNA hydrolase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253973187|gb|ACT38858.1| peptidyl-tRNA hydrolase [Escherichia coli B str. REL606]
gi|253977401|gb|ACT43071.1| peptidyl-tRNA hydrolase [Escherichia coli BL21(DE3)]
gi|254592074|gb|ACT71435.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. TW14359]
gi|257753514|dbj|BAI25016.1| peptidyl-tRNA hydrolase [Escherichia coli O26:H11 str. 11368]
gi|257758643|dbj|BAI30140.1| peptidyl-tRNA hydrolase [Escherichia coli O103:H2 str. 12009]
gi|257763965|dbj|BAI35460.1| peptidyl-tRNA hydrolase [Escherichia coli O111:H- str. 11128]
gi|260449661|gb|ACX40083.1| Aminoacyl-tRNA hydrolase [Escherichia coli DH1]
gi|284921016|emb|CBG34081.1| Peptidyl-tRNA hydrolase [Escherichia coli 042]
gi|290762102|gb|ADD56063.1| Peptidyl-tRNA hydrolase [Escherichia coli O55:H7 str. CB9615]
gi|291324339|gb|EFE63761.1| peptidyl-tRNA hydrolase [Escherichia coli B088]
gi|291434539|gb|EFF07512.1| peptidyl-tRNA hydrolase [Escherichia coli B185]
gi|291470059|gb|EFF12543.1| peptidyl-tRNA hydrolase [Escherichia coli B354]
gi|294489958|gb|ADE88714.1| peptidyl-tRNA hydrolase [Escherichia coli IHE3034]
gi|299877602|gb|EFI85813.1| peptidyl-tRNA hydrolase [Escherichia coli MS 196-1]
gi|300301221|gb|EFJ57606.1| peptidyl-tRNA hydrolase [Escherichia coli MS 185-1]
gi|300304608|gb|EFJ59128.1| peptidyl-tRNA hydrolase [Escherichia coli MS 200-1]
gi|300317532|gb|EFJ67316.1| peptidyl-tRNA hydrolase [Escherichia coli MS 175-1]
gi|300400367|gb|EFJ83905.1| peptidyl-tRNA hydrolase [Escherichia coli MS 69-1]
gi|300411052|gb|EFJ94590.1| peptidyl-tRNA hydrolase [Escherichia coli MS 45-1]
gi|300421756|gb|EFK05067.1| peptidyl-tRNA hydrolase [Escherichia coli MS 182-1]
gi|300449117|gb|EFK12737.1| peptidyl-tRNA hydrolase [Escherichia coli MS 116-1]
gi|300455564|gb|EFK19057.1| peptidyl-tRNA hydrolase [Escherichia coli MS 21-1]
gi|300463719|gb|EFK27212.1| peptidyl-tRNA hydrolase [Escherichia coli MS 187-1]
gi|300526325|gb|EFK47394.1| peptidyl-tRNA hydrolase [Escherichia coli MS 119-7]
gi|300530669|gb|EFK51731.1| peptidyl-tRNA hydrolase [Escherichia coli MS 107-1]
gi|300846333|gb|EFK74093.1| peptidyl-tRNA hydrolase [Escherichia coli MS 78-1]
gi|301073729|gb|EFK88535.1| peptidyl-tRNA hydrolase [Escherichia coli MS 146-1]
gi|305852535|gb|EFM52983.1| peptidyl-tRNA hydrolase [Escherichia coli NC101]
gi|306909759|gb|EFN40253.1| peptidyl-tRNA hydrolase [Escherichia coli W]
gi|307553259|gb|ADN46034.1| peptidyl-tRNA hydrolase [Escherichia coli ABU 83972]
gi|307627273|gb|ADN71577.1| peptidyl-tRNA hydrolase [Escherichia coli UM146]
gi|309701503|emb|CBJ00810.1| Peptidyl-tRNA hydrolase [Escherichia coli ETEC H10407]
gi|310335988|gb|EFQ01188.1| peptidyl-tRNA hydrolase [Escherichia coli 1827-70]
gi|312288897|gb|EFR16795.1| peptidyl-tRNA hydrolase [Escherichia coli 2362-75]
gi|312945834|gb|ADR26661.1| peptidyl-tRNA hydrolase [Escherichia coli O83:H1 str. NRG 857C]
gi|315060455|gb|ADT74782.1| peptidyl-tRNA hydrolase [Escherichia coli W]
gi|315135840|dbj|BAJ42999.1| peptidyl-tRNA hydrolase [Escherichia coli DH1]
gi|315288575|gb|EFU47973.1| peptidyl-tRNA hydrolase [Escherichia coli MS 110-3]
gi|315290782|gb|EFU50154.1| peptidyl-tRNA hydrolase [Escherichia coli MS 153-1]
gi|315297338|gb|EFU56618.1| peptidyl-tRNA hydrolase [Escherichia coli MS 16-3]
gi|315615954|gb|EFU96580.1| peptidyl-tRNA hydrolase [Escherichia coli 3431]
gi|320174894|gb|EFW50013.1| Peptidyl-tRNA hydrolase [Shigella dysenteriae CDC 74-1112]
gi|320181789|gb|EFW56699.1| Peptidyl-tRNA hydrolase [Shigella boydii ATCC 9905]
gi|320185607|gb|EFW60369.1| Peptidyl-tRNA hydrolase [Shigella flexneri CDC 796-83]
gi|320187996|gb|EFW62663.1| Peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC1212]
gi|320195786|gb|EFW70411.1| Peptidyl-tRNA hydrolase [Escherichia coli WV_060327]
gi|320637356|gb|EFX07163.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. G5101]
gi|320643218|gb|EFX12419.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H- str. 493-89]
gi|320648155|gb|EFX16831.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H- str. H 2687]
gi|320653989|gb|EFX22063.1| peptidyl-tRNA hydrolase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320659468|gb|EFX27037.1| peptidyl-tRNA hydrolase [Escherichia coli O55:H7 str. USDA 5905]
gi|320664605|gb|EFX31756.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. LSU-61]
gi|323153198|gb|EFZ39460.1| peptidyl-tRNA hydrolase [Escherichia coli EPECa14]
gi|323162271|gb|EFZ48129.1| peptidyl-tRNA hydrolase [Escherichia coli E128010]
gi|323168374|gb|EFZ54055.1| peptidyl-tRNA hydrolase [Shigella sonnei 53G]
gi|323172443|gb|EFZ58080.1| peptidyl-tRNA hydrolase [Escherichia coli LT-68]
gi|323185634|gb|EFZ70995.1| peptidyl-tRNA hydrolase [Escherichia coli 1357]
gi|323378981|gb|ADX51249.1| peptidyl-tRNA hydrolase [Escherichia coli KO11]
gi|323937925|gb|EGB34189.1| peptidyl-tRNA hydrolase [Escherichia coli E1520]
gi|323942483|gb|EGB38651.1| peptidyl-tRNA hydrolase [Escherichia coli E482]
gi|323947513|gb|EGB43517.1| peptidyl-tRNA hydrolase [Escherichia coli H120]
gi|323949679|gb|EGB45565.1| peptidyl-tRNA hydrolase [Escherichia coli H252]
gi|323953941|gb|EGB49740.1| peptidyl-tRNA hydrolase [Escherichia coli H263]
gi|323962782|gb|EGB58360.1| peptidyl-tRNA hydrolase [Escherichia coli H489]
gi|323973398|gb|EGB68585.1| peptidyl-tRNA hydrolase [Escherichia coli TA007]
gi|324006007|gb|EGB75226.1| peptidyl-tRNA hydrolase [Escherichia coli MS 57-2]
gi|324015646|gb|EGB84865.1| peptidyl-tRNA hydrolase [Escherichia coli MS 60-1]
gi|324017546|gb|EGB86765.1| peptidyl-tRNA hydrolase [Escherichia coli MS 117-3]
gi|324117248|gb|EGC11155.1| peptidyl-tRNA hydrolase [Escherichia coli E1167]
gi|326342752|gb|EGD66522.1| Peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. 1044]
gi|326346395|gb|EGD70132.1| Peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. 1125]
gi|330911071|gb|EGH39581.1| peptidyl-tRNA hydrolase [Escherichia coli AA86]
gi|331045274|gb|EGI17401.1| aminoacyl-tRNA hydrolase [Escherichia coli M605]
gi|331055503|gb|EGI27512.1| aminoacyl-tRNA hydrolase [Escherichia coli TA206]
gi|331065173|gb|EGI37068.1| aminoacyl-tRNA hydrolase [Escherichia coli TA271]
gi|331069960|gb|EGI41329.1| aminoacyl-tRNA hydrolase [Escherichia coli TA280]
gi|331075673|gb|EGI46971.1| aminoacyl-tRNA hydrolase [Escherichia coli H591]
gi|331080324|gb|EGI51503.1| aminoacyl-tRNA hydrolase [Escherichia coli H299]
gi|332094742|gb|EGI99786.1| peptidyl-tRNA hydrolase [Shigella boydii 3594-74]
gi|332101958|gb|EGJ05304.1| peptidyl-tRNA hydrolase [Shigella sp. D9]
Length = 194
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 171
>gi|114331140|ref|YP_747362.1| peptidyl-tRNA hydrolase [Nitrosomonas eutropha C91]
gi|122313983|sp|Q0AGY5|PTH_NITEC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|114308154|gb|ABI59397.1| peptidyl-tRNA hydrolase [Nitrosomonas eutropha C91]
Length = 195
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 100/177 (56%), Gaps = 9/177 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFH---AEISEGQLDGLRTIL 58
+V GLGNPG +Y RHNIG +DR+ A +F A I + D L
Sbjct: 7 LVVGLGNPGDKYTSTRHNIGSDWLDRLADAQRVSFALDIRFRGLCARIVQSDTD---IWL 63
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KPQT+MN SG S+ + +YK+ E LV+HD+LDL G ++LK+GGG GHNGLKSI
Sbjct: 64 LKPQTYMNASGMSVGAMCRYYKI-TPEQILVVHDELDLQPGIIKLKSGGGTGGHNGLKSI 122
Query: 119 -SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
++ + + RLRIG+G P D ++ +VL E + ID+ + PL+A+
Sbjct: 123 VADLSTQVFWRLRIGVGHPGDRNQVVDYVLHLPRREEAALIDEAIDHSIQVWPLIAR 179
>gi|311087637|gb|ADP67716.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 182
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 83/156 (53%), Gaps = 4/156 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIG-FMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NP EY RHN+G + S+ +KKF + ++ L+ P
Sbjct: 6 MIVGLSNPKKEYHSTRHNVGSWYLYSLAESYLRNFKNEKKFFGFTTSLNIESNYIRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMN++GQS+ ++ +FY + NL L++HDDL+L G +LK G GHNGL+ I
Sbjct: 66 NIFMNINGQSVFKMASFYNI-NLSEILIVHDDLELQPGISKLKYSYGHNGHNGLRDIVNT 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K N+ R RIGIGRP + I VL N + E+
Sbjct: 125 FNKNINFYRFRIGIGRPINRDQIASFVLSNPTKKEK 160
>gi|170768141|ref|ZP_02902594.1| peptidyl-tRNA hydrolase [Escherichia albertii TW07627]
gi|170122907|gb|EDS91838.1| peptidyl-tRNA hydrolase [Escherichia albertii TW07627]
gi|323964702|gb|EGB60173.1| peptidyl-tRNA hydrolase [Escherichia coli M863]
gi|323977225|gb|EGB72312.1| peptidyl-tRNA hydrolase [Escherichia coli TW10509]
gi|327253894|gb|EGE65523.1| peptidyl-tRNA hydrolase [Escherichia coli STEC_7v]
Length = 194
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 171
>gi|84497835|ref|ZP_00996632.1| peptidyl-tRNA hydrolase [Janibacter sp. HTCC2649]
gi|84381335|gb|EAP97218.1| peptidyl-tRNA hydrolase [Janibacter sp. HTCC2649]
Length = 196
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 100/178 (56%), Gaps = 9/178 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-------FHFFPAWKKKFHAEISEGQLDGLR 55
+V GLGNPG Y NRHN+G M ID + S H A + G + G
Sbjct: 1 MVVGLGNPGPTYAGNRHNVGAMVIDELASRTKSALRTHKARAVAAQVRIGTGPGGVPGPS 60
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
++ P ++MN SG + +M F+ + + +VIHD+LD+ G +RLK GGG+ GHNGL
Sbjct: 61 AVIAVPGSYMNESGGPVKALMGFFSV-EPDRLVVIHDELDIPAGDVRLKLGGGEGGHNGL 119
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+SIS+ G K+Y R+R+GIGRPP VL +FS ER L ++ + A ++ +L
Sbjct: 120 RSISKSLGTKDYLRVRVGIGRPPGRQDAADFVLKDFSPVERKELPFLLGDAADAVEML 177
>gi|332092244|gb|EGI97321.1| peptidyl-tRNA hydrolase [Shigella boydii 5216-82]
Length = 194
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 171
>gi|62180347|ref|YP_216764.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62127980|gb|AAX65683.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322714822|gb|EFZ06393.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 202
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L+G L+ P
Sbjct: 13 LIVGLANPGTEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVP 72
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ +++FY++ + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 73 TTFMNLSGKAVGAMVSFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 131
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 132 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFK 186
>gi|157835761|pdb|2PTH|A Chain A, Peptidyl-Trna Hydrolase From Escherichia Coli
Length = 193
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 4 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 64 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 122
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 123 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 170
>gi|229846481|ref|ZP_04466589.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 7P49H1]
gi|229810574|gb|EEP46292.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 7P49H1]
Length = 194
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 104/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I+R+ F+ + KF + + ++G L+ P
Sbjct: 6 LIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LVIHD+LDL GT +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGALANFYRIKP-EEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S + L ++D + ++ + V
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSLADCDALEKVLDEATDCVEMIFRDGMVK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|332098233|gb|EGJ03206.1| peptidyl-tRNA hydrolase [Shigella dysenteriae 155-74]
Length = 190
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 1 MIVGLANPGAEYAATRHNTGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 61 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 119
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 120 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 167
>gi|331662607|ref|ZP_08363530.1| aminoacyl-tRNA hydrolase [Escherichia coli TA143]
gi|331061029|gb|EGI32993.1| aminoacyl-tRNA hydrolase [Escherichia coli TA143]
Length = 194
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 171
>gi|317048563|ref|YP_004116211.1| peptidyl-tRNA hydrolase [Pantoea sp. At-9b]
gi|316950180|gb|ADU69655.1| peptidyl-tRNA hydrolase [Pantoea sp. At-9b]
Length = 195
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 94/189 (49%), Gaps = 12/189 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLRTI 57
++ GL NPG EY RHN G +D + S P KF + L G
Sbjct: 6 LIVGLANPGAEYAATRHNAGAWYVDLLAERNNQSLKDEP----KFFGYTARLSLAGEDVR 61
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+ P TFMNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK
Sbjct: 62 LLVPTTFMNLSGKAVAAMATFYRIAP-EEILVAHDELDLPPGVAKFKQGGGHGGHNGLKD 120
Query: 118 ISEKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
I K G N+ RLR+GIG P D + VLG + E+ + +D R L K
Sbjct: 121 IISKLGNNNNFHRLRVGIGHPGDRNKVTGFVLGKPPASEQKLIDDAVDEAVRCTELWLKE 180
Query: 176 EDVSFLNHI 184
+ + +N +
Sbjct: 181 DKIKAMNRL 189
>gi|17545112|ref|NP_518514.1| peptidyl-tRNA hydrolase [Ralstonia solanacearum GMI1000]
gi|17427403|emb|CAD13921.1| peptidyl-trna hydrolase (pth) protein [Ralstonia solanacearum
GMI1000]
Length = 217
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 98/180 (54%), Gaps = 12/180 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ H + +FH + L L++P
Sbjct: 21 LIVGLGNPGAEYAATRHNAGFWLVDQLARMGHVTLRNETRFHGYAARATLWSHEVWLLQP 80
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QTFMN SG + + + FYK LP + LV+HD+LDL G ++LK GGG GHNGLK I+
Sbjct: 81 QTFMNRSGLATVALARFYKILP--DEILVVHDELDLLPGAVKLKLGGGSGGHNGLKDIAA 138
Query: 121 K-CGKNYKRLRIGIGR-----PPDTAHIIRHVLGNF--SSPERYFLLPIIDNIARSLPLL 172
+ + RLR+GIG PP TA +H + NF +P R I I RSL L
Sbjct: 139 HLTTQQFWRLRVGIGHPRNLLPPGTAPSGQHDVANFVLKAPRREEQELIDRAIDRSLDAL 198
>gi|1093598|prf||2104267B peptidyl-tRNA hydrolase
Length = 194
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 171
>gi|257068517|ref|YP_003154772.1| peptidyl-tRNA hydrolase [Brachybacterium faecium DSM 4810]
gi|256559335|gb|ACU85182.1| peptidyl-tRNA hydrolase [Brachybacterium faecium DSM 4810]
Length = 204
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 96/174 (55%), Gaps = 7/174 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEIS-EGQLDGL----RT 56
++V GLGNPG Y RHNIG M +D I + + EG+L R
Sbjct: 11 YLVVGLGNPGPRYAATRHNIGQMVLDHIADAGGGRFAAARRAQAVVLEGRLGNPGADERV 70
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
IL K TFMN+SG + + +Y +P + +HD++D+ F +RLK GGG+ GHNGL+
Sbjct: 71 ILAKTTTFMNVSGGPVKALAAYYDIPP-ARVVAVHDEVDIPFDAVRLKLGGGEGGHNGLR 129
Query: 117 SISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
I++ G K+Y R+R+G+GRP HVL FS+ ER L ++ + A ++
Sbjct: 130 DITKALGTKDYLRVRVGVGRPTGGRDTADHVLAPFSATERKSLDLLVADAADAV 183
>gi|198283911|ref|YP_002220232.1| peptidyl-tRNA hydrolase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665738|ref|YP_002426545.1| peptidyl-tRNA hydrolase [Acidithiobacillus ferrooxidans ATCC 23270]
gi|226694245|sp|B5EKJ0|PTH_ACIF5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226723245|sp|B7J502|PTH_ACIF2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|198248432|gb|ACH84025.1| Aminoacyl-tRNA hydrolase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218517951|gb|ACK78537.1| peptidyl-tRNA hydrolase [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 189
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 97/176 (55%), Gaps = 12/176 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCI----DRIHSFHFFPAWKKKFHAEISEGQLDGLRTI 57
+++AGLGNPG EY RHN GF + DR+ + +K++H + + GL
Sbjct: 3 WLLAGLGNPGAEYARTRHNAGFWTLQTLADRVGASLRM---EKRWHCLAATARASGLELG 59
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L PQ FMN SG + + FYK+ E LV+HD+LDL G RLK GGG GHNGL+
Sbjct: 60 LCMPQDFMNRSGGPVQAMAAFYKV-AAERILVMHDELDLPPGAARLKRGGGHGGHNGLRD 118
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ G ++Y RLRIGIG P +I +VL S+P I + I RSL +L
Sbjct: 119 LDRALGTRDYWRLRIGIGHPGHKDAVIPYVL---SAPPPADKTLIDEAIERSLGVL 171
>gi|331652242|ref|ZP_08353261.1| aminoacyl-tRNA hydrolase [Escherichia coli M718]
gi|331050520|gb|EGI22578.1| aminoacyl-tRNA hydrolase [Escherichia coli M718]
Length = 194
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFFRV-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 171
>gi|327335129|gb|EGE76840.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes HL097PA1]
Length = 200
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 15/149 (10%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFH--------AEISEGQ 50
++V GLGNPG Y RHN+G I R PA ++ A +
Sbjct: 5 WLVIGLGNPGPRYAGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 51 LDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
+D IL++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LRLK GGGD
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGI-TPDHLIVVHDEIDLDPGRLRLKKGGGDN 123
Query: 111 GHNGLKSISE--KCGKNYKRLRIGIGRPP 137
GHNGLKSI + G ++ R+R+G+GR P
Sbjct: 124 GHNGLKSIRAHLRTG-DFIRVRLGVGRSP 151
>gi|146311990|ref|YP_001177064.1| peptidyl-tRNA hydrolase [Enterobacter sp. 638]
gi|167011994|sp|A4WBD3|PTH_ENT38 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145318866|gb|ABP61013.1| peptidyl-tRNA hydrolase [Enterobacter sp. 638]
Length = 194
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRINLAGADVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMATFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G N+ RLR+GIG P D ++ VLG S E+ + +D
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPSSEQKLIDEAVD 167
>gi|326383811|ref|ZP_08205496.1| peptidyl-tRNA hydrolase [Gordonia neofelifaecis NRRL B-59395]
gi|326197575|gb|EGD54764.1| peptidyl-tRNA hydrolase [Gordonia neofelifaecis NRRL B-59395]
Length = 188
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 93/139 (66%), Gaps = 3/139 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG Y + RHN+G M D + S H + K+ A + ++ G ++
Sbjct: 1 MKLIVGLGNPGPAYEKTRHNVGAMVADGLVSSHGEKFSVHKRSGALTATVRIGGEPVLVA 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
K +T+MN++G+ + + ++Y + ++ +V+HD+LD+DFG +RLK GGG+ GHNGL+SIS
Sbjct: 61 KSRTYMNVTGRQIGPLASYYSVAP-QDLIVLHDELDIDFGAVRLKLGGGEGGHNGLRSIS 119
Query: 120 EKCG-KNYKRLRIGIGRPP 137
+ G ++Y R+R+GIGRPP
Sbjct: 120 QTIGTRDYLRVRLGIGRPP 138
>gi|161613718|ref|YP_001587683.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|189038163|sp|A9MVZ4|PTH_SALPB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|161363082|gb|ABX66850.1| hypothetical protein SPAB_01443 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 194
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G ID + P ++ KF S L+G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYIDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFK 178
>gi|323179281|gb|EFZ64851.1| peptidyl-tRNA hydrolase [Escherichia coli 1180]
Length = 190
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 1 MIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 61 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 119
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 120 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 167
>gi|257471247|ref|ZP_05635246.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|311085932|gb|ADP66014.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086503|gb|ADP66584.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087085|gb|ADP67165.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 182
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 83/156 (53%), Gaps = 4/156 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIG-FMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NP EY RHN+G + S+ +KKF + ++ L+ P
Sbjct: 6 MIVGLSNPKKEYHSTRHNVGSWYLYSLAESYLRNFKNEKKFFGFTTSLNIESNYIRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMN++GQS+ ++ +FY + NL L++HDDL+L G +LK G GHNGL+ I
Sbjct: 66 NIFMNINGQSVFKMASFYNI-NLSEILIVHDDLELQPGISKLKYSYGHNGHNGLRDIVNT 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K N+ R RIGIGRP + I VL N + E+
Sbjct: 125 FNKNINFYRFRIGIGRPINRDQIASFVLSNPTKKEK 160
>gi|126175458|ref|YP_001051607.1| peptidyl-tRNA hydrolase [Shewanella baltica OS155]
gi|153001809|ref|YP_001367490.1| peptidyl-tRNA hydrolase [Shewanella baltica OS185]
gi|160876542|ref|YP_001555858.1| peptidyl-tRNA hydrolase [Shewanella baltica OS195]
gi|217972296|ref|YP_002357047.1| peptidyl-tRNA hydrolase [Shewanella baltica OS223]
gi|304410285|ref|ZP_07391904.1| peptidyl-tRNA hydrolase [Shewanella baltica OS183]
gi|307302004|ref|ZP_07581762.1| peptidyl-tRNA hydrolase [Shewanella baltica BA175]
gi|166229450|sp|A3D7M5|PTH_SHEB5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229451|sp|A6WRI8|PTH_SHEB8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038164|sp|A9KZZ0|PTH_SHEB9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783886|sp|B8E6L3|PTH_SHEB2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|125998663|gb|ABN62738.1| peptidyl-tRNA hydrolase [Shewanella baltica OS155]
gi|151366427|gb|ABS09427.1| Aminoacyl-tRNA hydrolase [Shewanella baltica OS185]
gi|160862064|gb|ABX50598.1| Aminoacyl-tRNA hydrolase [Shewanella baltica OS195]
gi|217497431|gb|ACK45624.1| Aminoacyl-tRNA hydrolase [Shewanella baltica OS223]
gi|304351694|gb|EFM16093.1| peptidyl-tRNA hydrolase [Shewanella baltica OS183]
gi|306914042|gb|EFN44463.1| peptidyl-tRNA hydrolase [Shewanella baltica BA175]
gi|315268736|gb|ADT95589.1| peptidyl-tRNA hydrolase [Shewanella baltica OS678]
Length = 195
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 100/191 (52%), Gaps = 8/191 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIG---FMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG EY RHN G + + RI K+ + L G L+
Sbjct: 6 LIVGLANPGAEYAHTRHNAGAWYVLELARICGVTLVA--DSKYFGLTARAVLHGKDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSG+++ + NF+++ E LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 IPTTYMNLSGKAVGALANFFRITP-EEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDII 122
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
K KN+ RLR+GIG P D + +VLG + E+ + ID RS +L K++
Sbjct: 123 AKLANDKNFYRLRLGIGHPGDKNQVSGYVLGKAPAKEQELIDAAIDEAVRSTEILFKQDM 182
Query: 178 VSFLNHIVSVR 188
V +N + S +
Sbjct: 183 VKAMNRLHSFK 193
>gi|219682120|ref|YP_002468504.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219621853|gb|ACL30009.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
Length = 177
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 83/156 (53%), Gaps = 4/156 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIG-FMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NP EY RHN+G + S+ +KKF + ++ L+ P
Sbjct: 1 MIVGLSNPKKEYHSTRHNVGSWYLYSLAESYLRNFKNEKKFFGFTTSLNIESNYIRLLIP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMN++GQS+ ++ +FY + NL L++HDDL+L G +LK G GHNGL+ I
Sbjct: 61 NIFMNINGQSVFKMASFYNI-NLSEILIVHDDLELQPGISKLKYSYGHNGHNGLRDIVNT 119
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K N+ R RIGIGRP + I VL N + E+
Sbjct: 120 FNKNINFYRFRIGIGRPINRDQIASFVLSNPTEKEK 155
>gi|21263845|sp|Q8Y2E3|PTH_RALSO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 200
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 98/180 (54%), Gaps = 12/180 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ H + +FH + L L++P
Sbjct: 4 LIVGLGNPGAEYAATRHNAGFWLVDQLARMGHVTLRNETRFHGYAARATLWSHEVWLLQP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QTFMN SG + + + FYK LP + LV+HD+LDL G ++LK GGG GHNGLK I+
Sbjct: 64 QTFMNRSGLATVALARFYKILP--DEILVVHDELDLLPGAVKLKLGGGSGGHNGLKDIAA 121
Query: 121 K-CGKNYKRLRIGIGR-----PPDTAHIIRHVLGNF--SSPERYFLLPIIDNIARSLPLL 172
+ + RLR+GIG PP TA +H + NF +P R I I RSL L
Sbjct: 122 HLTTQQFWRLRVGIGHPRNLLPPGTAPSGQHDVANFVLKAPRREEQELIDRAIDRSLDAL 181
>gi|15616809|ref|NP_240021.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681562|ref|YP_002467948.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
gi|11133756|sp|P57287|PTH_BUCAI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783857|sp|B8D8Y9|PTH_BUCA5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|25319087|pir||C84952 aminoacyl-tRNA hydrolase (EC 3.1.1.29) [imported] - Buchnera sp.
(strain APS)
gi|10038872|dbj|BAB12907.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219624405|gb|ACL30560.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
Length = 177
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 83/156 (53%), Gaps = 4/156 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIG-FMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NP EY RHN+G + S+ +KKF + ++ L+ P
Sbjct: 1 MIVGLSNPKKEYHSTRHNVGSWYLYSLAESYLRNFKNEKKFFGFTTSLNIESNYIRLLIP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMN++GQS+ ++ +FY + NL L++HDDL+L G +LK G GHNGL+ I
Sbjct: 61 NIFMNINGQSVFKMASFYNI-NLSEILIVHDDLELQPGISKLKYSYGHNGHNGLRDIVNT 119
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K N+ R RIGIGRP + I VL N + E+
Sbjct: 120 FNKNINFYRFRIGIGRPINRDQIASFVLSNPTKKEK 155
>gi|114319447|ref|YP_741130.1| peptidyl-tRNA hydrolase [Alkalilimnicola ehrlichii MLHE-1]
gi|119390908|sp|Q0ABZ7|PTH_ALHEH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|114225841|gb|ABI55640.1| peptidyl-tRNA hydrolase [Alkalilimnicola ehrlichii MLHE-1]
Length = 197
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 98/169 (57%), Gaps = 8/169 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG Y RHN GF +D R H P ++++HA+++ L + L+
Sbjct: 10 LIVGLGNPGDRYAGTRHNAGFWLLDELLRRHGGALRP--ERRYHADLATLHLGPHQCRLM 67
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+PQT+MN SGQ++ F++LP E+ LV+HD++DL G ++LK GGG GHNGL+ I
Sbjct: 68 RPQTYMNRSGQAVGPYAQFFRLPP-ESILVVHDEIDLPPGQVKLKQGGGHGGHNGLRDII 126
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
G + + R RIG+G P ++ +VL + ER + ++ +A
Sbjct: 127 RALGNERGFCRARIGVGHPGHRDGVVPYVLSRPAPDERRAIADAVEELA 175
>gi|152997608|ref|YP_001342443.1| peptidyl-tRNA hydrolase [Marinomonas sp. MWYL1]
gi|189038155|sp|A6W1C9|PTH_MARMS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|150838532|gb|ABR72508.1| Aminoacyl-tRNA hydrolase [Marinomonas sp. MWYL1]
Length = 194
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 90/157 (57%), Gaps = 5/157 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G I+ + +KKF + + + G L+ P
Sbjct: 6 LLVGLGNPGSEYENTRHNAGAQWIEALARQSQCSLRSEKKFFGQFGKVYIAGEECYLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ V FYK+P E LVIHD+LD+ GT +LK GGG GHNGLK I K
Sbjct: 66 TTYMNLSGKAVQAVCQFYKIPP-EEVLVIHDELDIPPGTAKLKQGGGHGGHNGLKDIISK 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERY 156
N + RLRIGIG P + + +VL ++P+ Y
Sbjct: 125 LANNREFGRLRIGIGHPGHASQVANYVLKK-AAPDDY 160
>gi|91781711|ref|YP_556917.1| peptidyl-tRNA hydrolase [Burkholderia xenovorans LB400]
gi|119390921|sp|Q145X4|PTH_BURXL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|91685665|gb|ABE28865.1| peptidyl-tRNA hydrolase [Burkholderia xenovorans LB400]
Length = 200
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 107/182 (58%), Gaps = 12/182 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLAREAGTTLRDERRFHGFYAKARLHGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ + F+K LP+ LV HD+LD+ G+++LK GGG GHNGLK I+
Sbjct: 64 QTYMNRSGQSVVALAQFFKILPD--EILVAHDELDMPPGSVKLKLGGGSGGHNGLKDITA 121
Query: 121 K-CGKNYKRLRIGIGRP----PDTAHI-IRHVLGNFS-SPERYFLLPIID-NIARSLPLL 172
+ Y RLRIGIG P P++A R + N+ P R +ID +I R+L ++
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGARPDVANYVLKPPRREEQDVIDASIERALAVM 181
Query: 173 AK 174
+
Sbjct: 182 PQ 183
>gi|300906889|ref|ZP_07124563.1| peptidyl-tRNA hydrolase [Escherichia coli MS 84-1]
gi|301305574|ref|ZP_07211665.1| peptidyl-tRNA hydrolase [Escherichia coli MS 124-1]
gi|300401322|gb|EFJ84860.1| peptidyl-tRNA hydrolase [Escherichia coli MS 84-1]
gi|300839163|gb|EFK66923.1| peptidyl-tRNA hydrolase [Escherichia coli MS 124-1]
gi|315254837|gb|EFU34805.1| peptidyl-tRNA hydrolase [Escherichia coli MS 85-1]
Length = 194
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEGVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 171
>gi|186475082|ref|YP_001856552.1| peptidyl-tRNA hydrolase [Burkholderia phymatum STM815]
gi|238689439|sp|B2JCN7|PTH_BURP8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|184191541|gb|ACC69506.1| Aminoacyl-tRNA hydrolase [Burkholderia phymatum STM815]
Length = 200
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 12/180 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLIDQLAREAGTTLRDERRFHGFYAKARLYGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
T+MN SGQS++ + +F+K LP+ LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 64 MTYMNRSGQSVVALAHFFKILPD--QILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 121
Query: 121 KCG-KNYKRLRIGIGRP----PDTAHI-IRHVLGNFS-SPERYFLLPIID-NIARSLPLL 172
+ Y RLRIGIG P PD+A + + NF P R +ID +I R+L ++
Sbjct: 122 HLSTQQYWRLRIGIGHPRDLIPDSARAGAKPDVANFVLKPPRKEEQDLIDASIERALAVM 181
>gi|197284952|ref|YP_002150824.1| peptidyl-tRNA hydrolase [Proteus mirabilis HI4320]
gi|227355354|ref|ZP_03839755.1| peptidyl-tRNA hydrolase [Proteus mirabilis ATCC 29906]
gi|238693173|sp|B4EVR1|PTH_PROMH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|194682439|emb|CAR42332.1| peptidyl-tRNA hydrolase [Proteus mirabilis HI4320]
gi|227164578|gb|EEI49449.1| peptidyl-tRNA hydrolase [Proteus mirabilis ATCC 29906]
Length = 194
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 93/164 (56%), Gaps = 4/164 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y + RHN G +D + H + KF + L+G L+ P
Sbjct: 6 LIVGLANPGADYAQTRHNAGAWYVDLLAQRHQQSLKEESKFFGYTARINLNGNDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++L + NFY++ + LV HD+LDL G +++K GGG+ GHNGLK I K
Sbjct: 66 TTFMNLSGKAVLAMANFYRI-QPDEILVAHDELDLPPGVVKMKLGGGNGGHNGLKDIQSK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
N+ RLRIGIG P D ++ VLG + E+ + ID
Sbjct: 125 FSNNPNFYRLRIGIGHPGDKNKVVGFVLGKPPTSEQKLIDDAID 168
>gi|171464202|ref|YP_001798315.1| Aminoacyl-tRNA hydrolase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|238692825|sp|B1XS66|PTH_POLNS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|171193740|gb|ACB44701.1| Aminoacyl-tRNA hydrolase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 196
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 87/140 (62%), Gaps = 3/140 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ E+RHN GF +D + +K+FH ++++ + +G L+KP
Sbjct: 4 LIVGLGNPGEEHEEDRHNAGFWFVDALAKQLGVRFESEKRFHGKVAKAKWEGEDLFLLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSGQS+ + F+K+ + LV+ D+LD+ G+ RLK GGG GHNGLK I
Sbjct: 64 STYMNLSGQSVGALCRFHKIMP-ADILVVQDELDIKPGSARLKLGGGTGGHNGLKDIQAH 122
Query: 122 CGK-NYKRLRIGIGRPPDTA 140
NY RLR+GIG P D A
Sbjct: 123 LSTPNYWRLRLGIGHPRDIA 142
>gi|291225499|ref|XP_002732734.1| PREDICTED: peptidyl-tRNA hydrolase 1 homolog [Saccoglossus
kowalevskii]
Length = 228
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 95/172 (55%), Gaps = 10/172 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDG-LRTILI 59
+V GLGN + + RH++G ++RI + W K K +++ +DG IL+
Sbjct: 40 LVVGLGN--YTMPDTRHSVGMTTVNRI-ANQMGLTWHKDRKCFGDVAVTTIDGDHHLILL 96
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+ FMN++G S+++ Y+L + YL IHDDLD FG +K G GHNG+KS +
Sbjct: 97 KPRLFMNVNGLSIVKCAKKYELQPSDIYL-IHDDLDRSFGKYSIKLNGSARGHNGVKS-A 154
Query: 120 EKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
C K+ R+RIGIGRP +I +VL F+ + L IID + +L
Sbjct: 155 MNCLKSDAMVRMRIGIGRPTTKNEVINYVLSQFTGEQLLILDGIIDGVVDTL 206
>gi|260912294|ref|ZP_05918845.1| aminoacyl-tRNA hydrolase [Prevotella sp. oral taxon 472 str. F0295]
gi|260633595|gb|EEX51734.1| aminoacyl-tRNA hydrolase [Prevotella sp. oral taxon 472 str. F0295]
Length = 189
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 87/163 (53%), Gaps = 2/163 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GFM +D ++ K + ++ + G + L+KP
Sbjct: 4 YLIVGLGNPGREYEATRHNTGFMILDAFAKASNI-VFEDKRYGFVTSTMVKGRKLFLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ ++ +P E+ LV+ DDL L G LRLK G + GHNGL I +
Sbjct: 63 STFMNLSGNAVRYWLDKENIPQ-EHLLVVVDDLALPLGALRLKGNGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
G Y RLR+GIG + VLG + E L P I+
Sbjct: 122 IGPQYARLRVGIGNEFPRGGQVDWVLGEYDEEELKTLQPAIEQ 164
>gi|82776544|ref|YP_402893.1| peptidyl-tRNA hydrolase [Shigella dysenteriae Sd197]
gi|309789168|ref|ZP_07683761.1| peptidyl-tRNA hydrolase [Shigella dysenteriae 1617]
gi|119391007|sp|Q32H03|PTH_SHIDS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|81240692|gb|ABB61402.1| peptidyl-tRNA hydrolase [Shigella dysenteriae Sd197]
gi|308922922|gb|EFP68436.1| peptidyl-tRNA hydrolase [Shigella dysenteriae 1617]
Length = 194
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV+HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFFRI-NPDEILVVHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID R
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAVR 171
>gi|16760676|ref|NP_456293.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29141565|ref|NP_804907.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56413296|ref|YP_150371.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362221|ref|YP_002141858.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|16420313|gb|AAL20698.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16502972|emb|CAD02138.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137192|gb|AAO68756.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56127553|gb|AAV77059.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197093698|emb|CAR59170.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|261246969|emb|CBG24786.1| PTH [Salmonella enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|323130055|gb|ADX17485.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326627608|gb|EGE33951.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 202
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L+G L+ P
Sbjct: 13 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVP 72
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 73 TTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 131
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 132 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFK 186
>gi|72080543|ref|YP_287601.1| peptidyl-tRNA hydrolase [Mycoplasma hyopneumoniae 7448]
gi|119390962|sp|Q4A8G1|PTH_MYCH7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71913667|gb|AAZ53578.1| peptidyl-tRNA hydrolase [Mycoplasma hyopneumoniae 7448]
Length = 184
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN+G+ +D + ++ +K I Q D IL K
Sbjct: 1 MKLIVGLGNPGEKYAKTKHNVGYWVLDLLAE-KLALSFDQKTENGIYVKQPD---FILAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + E++ FYK+ N ++ ++I+DD++ + G +KT G G G+ I E
Sbjct: 57 PTTFMNKSGDFVEELIKFYKI-NTQDLMIIYDDMNFEVGQAAIKTTGSAGGQRGMAHIIE 115
Query: 121 KC-GKNYKRLRIGIGRPPDTAHII 143
KC K KRL+IGI R + +
Sbjct: 116 KCKTKEIKRLKIGISRGKNAKEYV 139
>gi|54020384|ref|YP_115690.1| peptidyl-tRNA hydrolase [Mycoplasma hyopneumoniae 232]
gi|71893556|ref|YP_279002.1| peptidyl-tRNA hydrolase [Mycoplasma hyopneumoniae J]
gi|68052908|sp|Q601M5|PTH_MYCH2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390963|sp|Q4AAD0|PTH_MYCHJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|53987557|gb|AAV27758.1| peptidyl-tRNA hydrolase [Mycoplasma hyopneumoniae 232]
gi|71851683|gb|AAZ44291.1| peptidyl-tRNA hydrolase [Mycoplasma hyopneumoniae J]
Length = 184
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN+G+ +D + ++ +K I Q D IL K
Sbjct: 1 MKLIVGLGNPGEKYAKTKHNVGYWVLDLLAE-KLALSFDQKTENGIYVKQPD---FILAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + E++ FYK+ N ++ ++I+DD++ + G +KT G G G+ I E
Sbjct: 57 PTTFMNKSGDFVEELIKFYKI-NTQDLMIIYDDMNFEVGQAAIKTTGSAGGQRGMAHIIE 115
Query: 121 KC-GKNYKRLRIGIGRPPDTAHII 143
KC K KRL+IGI R + +
Sbjct: 116 KCKTKEIKRLKIGISRGENAKEYV 139
>gi|313835377|gb|EFS73091.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL037PA2]
gi|314929234|gb|EFS93065.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL044PA1]
gi|314972373|gb|EFT16470.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL037PA3]
Length = 200
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 91/167 (54%), Gaps = 15/167 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKK---FHAEISEGQL---- 51
++V GLGNPG Y RHN+G I R + PA ++ +S L
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVITELCRRVGENLSPARGQRAELVRTRLSSAGLGIPA 64
Query: 52 -DGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
D L++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LR+K GGGD
Sbjct: 65 ADAQTVTLMRSRTYMNESGIAVRKVADFSGI-TPDHLIVVHDEIDLDPGRLRIKKGGGDN 123
Query: 111 GHNGLKSISE--KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
GHNGLKSI + G ++ R+R+G+GRPP VL + +R
Sbjct: 124 GHNGLKSIRVHIRTG-DFIRVRVGVGRPPGRQDPADWVLARVPARQR 169
>gi|326623106|gb|EGE29451.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 202
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L+G L+ P
Sbjct: 13 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVP 72
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 73 TTFMNLSGKAVGTMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 131
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 132 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFK 186
>gi|167561484|ref|ZP_02354400.1| peptidyl-tRNA hydrolase [Burkholderia oklahomensis EO147]
gi|167568714|ref|ZP_02361588.1| peptidyl-tRNA hydrolase [Burkholderia oklahomensis C6786]
Length = 201
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 87/139 (62%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLHGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQ+++ + +F+K LP+ LV HD+LDL G ++LK GGG GHNGLK IS
Sbjct: 64 QTYMNRSGQAVVALAHFFKILPD--EILVAHDELDLPPGAVKLKLGGGSGGHNGLKDISA 121
Query: 121 K-CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 122 HLSSQQYWRLRIGIGHPRD 140
>gi|161503104|ref|YP_001570216.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160864451|gb|ABX21074.1| hypothetical protein SARI_01169 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 202
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L+G L+ P
Sbjct: 13 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVP 72
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 73 TTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 131
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 132 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFK 186
>gi|39546325|ref|NP_460739.2| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167553611|ref|ZP_02347360.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167993230|ref|ZP_02574325.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168233818|ref|ZP_02658876.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168237841|ref|ZP_02662899.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168259988|ref|ZP_02681961.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168462737|ref|ZP_02696668.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168820525|ref|ZP_02832525.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194444828|ref|YP_002041035.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194472071|ref|ZP_03078055.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194737518|ref|YP_002114815.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197250918|ref|YP_002146244.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197264625|ref|ZP_03164699.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|200391080|ref|ZP_03217691.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204927670|ref|ZP_03218871.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205352549|ref|YP_002226350.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856710|ref|YP_002243361.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213027308|ref|ZP_03341755.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213163410|ref|ZP_03349120.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213419000|ref|ZP_03352066.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213426488|ref|ZP_03359238.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213650575|ref|ZP_03380628.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|61230024|sp|P0A281|PTH_SALTY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|61230025|sp|P0A282|PTH_SALTI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119364641|sp|Q5PCR7|PTH_SALPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226709064|sp|B5F4G7|PTH_SALA4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226709066|sp|B5R3J2|PTH_SALEP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226709067|sp|B5R917|PTH_SALG2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238689759|sp|B4TXV1|PTH_SALSV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238693514|sp|B4SUH1|PTH_SALNS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|194403491|gb|ACF63713.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194458435|gb|EDX47274.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194713020|gb|ACF92241.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195634529|gb|EDX52881.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197214621|gb|ACH52018.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197242880|gb|EDY25500.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197289227|gb|EDY28594.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|199603525|gb|EDZ02071.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204323012|gb|EDZ08208.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205272330|emb|CAR37210.1| Peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205321993|gb|EDZ09832.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205328643|gb|EDZ15407.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205332138|gb|EDZ18902.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205342740|gb|EDZ29504.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205350578|gb|EDZ37209.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206708513|emb|CAR32834.1| Peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|267993734|gb|ACY88619.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158307|emb|CBW17806.1| Peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912773|dbj|BAJ36747.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320085715|emb|CBY95493.1| Peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321224414|gb|EFX49477.1| Peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322616779|gb|EFY13687.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322620410|gb|EFY17276.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625688|gb|EFY22507.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322626138|gb|EFY22948.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322633744|gb|EFY30484.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638898|gb|EFY35591.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640881|gb|EFY37530.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322644103|gb|EFY40648.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649174|gb|EFY45612.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322655333|gb|EFY51641.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322660909|gb|EFY57140.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322662793|gb|EFY59000.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322667977|gb|EFY64136.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322674261|gb|EFY70355.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322678542|gb|EFY74600.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322683201|gb|EFY79217.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686894|gb|EFY82872.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323195215|gb|EFZ80395.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323200193|gb|EFZ85279.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323204521|gb|EFZ89525.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323207362|gb|EFZ92310.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323213715|gb|EFZ98497.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323217347|gb|EGA02066.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323219236|gb|EGA03731.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323228013|gb|EGA12158.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231368|gb|EGA15481.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235808|gb|EGA19887.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240377|gb|EGA24420.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323245270|gb|EGA29270.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249841|gb|EGA33740.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252831|gb|EGA36667.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258534|gb|EGA42203.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323266743|gb|EGA50229.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323268949|gb|EGA52405.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 194
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L+G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFK 178
>gi|198243363|ref|YP_002215360.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|226709065|sp|B5FU10|PTH_SALDC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|197937879|gb|ACH75212.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
Length = 194
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L+G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVGTMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFK 178
>gi|207727834|ref|YP_002256228.1| peptidyl-trna hydrolase (pth) protein [Ralstonia solanacearum
MolK2]
gi|206591075|emb|CAQ56687.1| peptidyl-trna hydrolase (pth) protein [Ralstonia solanacearum
MolK2]
Length = 200
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 97/177 (54%), Gaps = 12/177 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ H + +FH + L G L++P
Sbjct: 4 LIVGLGNPGAEYAATRHNAGFWLVDQLARMGHVTLRNETRFHGYAARATLWGHDVWLLQP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-S 119
QTFMN SG + + + FYK LP + LV HD+LDL G ++LK GGG GHNGLK I +
Sbjct: 64 QTFMNRSGLATVALARFYKILP--DEILVAHDELDLPPGAVKLKLGGGSGGHNGLKDIGA 121
Query: 120 EKCGKNYKRLRIGIGR-----PPDTAHIIRHVLGNF--SSPERYFLLPIIDNIARSL 169
+ + RLR+GIG PP TA +H + NF +P R I I RSL
Sbjct: 122 HLTTQQFWRLRLGIGHPRNLLPPGTAPSGQHDVANFVLKAPRREEQELIDRAIDRSL 178
>gi|46447227|ref|YP_008592.1| peptidyl-tRNA hydrolase [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400868|emb|CAF24317.1| putative peptidyl-tRNA hydrolase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 198
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 40 KKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFG 99
K+F+A IS+G ++ LI P T+MNLSG ++ ++F+K P + N V+ DD+ L FG
Sbjct: 21 KRFNALISKGMVENKSVHLILPLTYMNLSGTAVKRYLDFFKFP-MTNLFVVTDDISLSFG 79
Query: 100 TLRLKTGGGDAGHNGLKSISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
L+LKT G GHNGLKS+ G + Y RL++GIG P + + +VL F+ E L
Sbjct: 80 KLKLKTMGSAGGHNGLKSVETHLGTSHYNRLKMGIGHPGE-KNFASYVLDVFTQEELQVL 138
Query: 159 LPIIDNIARSLPLLAKREDVSFLNHI 184
+D L L K +N +
Sbjct: 139 ATFVDRGVEVLLRLIKESVSQVMNAV 164
>gi|254427753|ref|ZP_05041460.1| peptidyl-tRNA hydrolase [Alcanivorax sp. DG881]
gi|196193922|gb|EDX88881.1| peptidyl-tRNA hydrolase [Alcanivorax sp. DG881]
Length = 195
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 96/185 (51%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G +D + F KK+ + +G L+ P
Sbjct: 7 LIVGLGNPGREYEDTRHNAGVWYVDALARRQGVFLTEDKKYFGLTATFSFEGETIRLLVP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ+ + NF+K+P + L+ HD+LDL G R K GGG GHNGL+ I +
Sbjct: 67 TTFMNRSGQATAALANFFKIP-VTQMLIAHDELDLPPGCARFKQGGGHGGHNGLRDIISR 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ RLR+GIG P + HVL S +R + ID A + + +
Sbjct: 126 HGNSRDFYRLRLGIGHPGSADRVTPHVLNKPSKADRDLIDRAIDEAAHYTADMLRGDLNG 185
Query: 180 FLNHI 184
+NH+
Sbjct: 186 AMNHL 190
>gi|325858407|ref|ZP_08172569.1| aminoacyl-tRNA hydrolase [Prevotella denticola CRIS 18C-A]
gi|327313925|ref|YP_004329362.1| aminoacyl-tRNA hydrolase [Prevotella denticola F0289]
gi|325483045|gb|EGC86033.1| aminoacyl-tRNA hydrolase [Prevotella denticola CRIS 18C-A]
gi|326946082|gb|AEA21967.1| aminoacyl-tRNA hydrolase [Prevotella denticola F0289]
Length = 190
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 88/162 (54%), Gaps = 2/162 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG Y RHN G+M +D ++ K + ++E + G + IL+KP
Sbjct: 4 YLICGLGNPGQTYEGTRHNTGYMVLDAFAKASNI-VFEDKRYGFVAETTVKGRKVILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + LV+ DD+ L G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNKEHIDQ-SRLLVVSDDVALPLGAFRLKGSGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G++Y RLR+G+G + VLG++S E L P ID
Sbjct: 122 IGQDYARLRMGVGNDYPRGGQVDWVLGHYSDEEMKVLQPSID 163
>gi|307131087|ref|YP_003883103.1| peptidyl-tRNA hydrolase [Dickeya dadantii 3937]
gi|306528616|gb|ADM98546.1| peptidyl-tRNA hydrolase [Dickeya dadantii 3937]
Length = 195
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 99/185 (53%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G IDR+ + P + KF + + G L+ P
Sbjct: 6 LIVGLANPGAEYATTRHNAGAWYIDRLAEAYRQPLKEESKFFGYTARLSMAGNDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ + LV HD+LDL G +LK GGG GHNGLK I K
Sbjct: 66 TTFMNLSGKAVAAMATFYRI-QPDEILVAHDELDLPPGVAKLKLGGGHGGHNGLKDIVSK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P D ++ VLG + E+ + ID R +L K + +
Sbjct: 125 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPASEQTLIDQAIDESLRCTDILMKEDMIK 184
Query: 180 FLNHI 184
+N +
Sbjct: 185 AMNRL 189
>gi|307728380|ref|YP_003905604.1| peptidyl-tRNA hydrolase [Burkholderia sp. CCGE1003]
gi|323524670|ref|YP_004226823.1| peptidyl-tRNA hydrolase [Burkholderia sp. CCGE1001]
gi|307582915|gb|ADN56313.1| peptidyl-tRNA hydrolase [Burkholderia sp. CCGE1003]
gi|323381672|gb|ADX53763.1| peptidyl-tRNA hydrolase [Burkholderia sp. CCGE1001]
Length = 200
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 87/139 (62%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLAREAGTTLRDERRFHGFYAKARLHGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ + F+K LP+ LV HD+LD+ G+++LK GGG GHNGLK I+
Sbjct: 64 QTYMNRSGQSVVALAQFFKILPD--EILVAHDELDMPPGSVKLKLGGGSGGHNGLKDITA 121
Query: 121 K-CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 122 HLSSQQYWRLRIGIGHPRD 140
>gi|238792544|ref|ZP_04636177.1| Peptidyl-tRNA hydrolase [Yersinia intermedia ATCC 29909]
gi|238728179|gb|EEQ19700.1| Peptidyl-tRNA hydrolase [Yersinia intermedia ATCC 29909]
Length = 196
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 102/190 (53%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H P + KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLAQRHNQPLKEESKFFGYTARLNLAGQDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG+++ + FY+ LP E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 66 STFMNLSGKAVAAMAGFYRILP--EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N+ RLRIGIG P D + + VLG S E+ + ID R +L K +
Sbjct: 124 RLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPSSEQTLIDDAIDESIRCTEILLKEDIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|300920401|ref|ZP_07136836.1| peptidyl-tRNA hydrolase [Escherichia coli MS 115-1]
gi|300412617|gb|EFJ95927.1| peptidyl-tRNA hydrolase [Escherichia coli MS 115-1]
Length = 194
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIIGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 171
>gi|238783262|ref|ZP_04627287.1| Peptidyl-tRNA hydrolase [Yersinia bercovieri ATCC 43970]
gi|238715855|gb|EEQ07842.1| Peptidyl-tRNA hydrolase [Yersinia bercovieri ATCC 43970]
Length = 196
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H ++ KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEEAKFFGYTARLNLAGQDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG++++ + FY++ E LV HD+LD+ G +LK GGG+ GHNGLK I K
Sbjct: 66 STFMNLSGKAVVAMAGFYRI-QPEEILVAHDELDIPPGAAKLKLGGGNGGHNGLKDIQSK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P D + ++ VLG + E+ + ID R +L K +
Sbjct: 125 LGNNPNFYRLRIGIGHPGDKSKVVGFVLGKPPASEQLLIDEAIDEAIRCTEVLMKEDITK 184
Query: 180 FLNHIVSVR 188
+N + S +
Sbjct: 185 AMNRLHSFK 193
>gi|299068048|emb|CBJ39262.1| peptidyl-tRNA hydrolase [Ralstonia solanacearum CMR15]
Length = 200
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 98/180 (54%), Gaps = 12/180 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ H + +FH + L L++P
Sbjct: 4 LIVGLGNPGAEYAATRHNAGFWLVDQLARMGHVTLRNETRFHGYAARATLWSHEVWLLQP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QTFMN SG + + + FYK LP + LV+HD+LDL G ++LK GGG GHNGLK I+
Sbjct: 64 QTFMNRSGLATVALARFYKILP--DEILVVHDELDLLPGAVKLKLGGGSGGHNGLKDIAA 121
Query: 121 K-CGKNYKRLRIGIGR-----PPDTAHIIRHVLGNF--SSPERYFLLPIIDNIARSLPLL 172
+ + RLR+GIG PP TA +H + NF +P R I I RSL L
Sbjct: 122 HLTTQQFWRLRLGIGHPRNLLPPGTAPSGQHDVANFVLKAPRREEQELIDRAIDRSLDAL 181
>gi|254442208|ref|ZP_05055684.1| peptidyl-tRNA hydrolase superfamily [Verrucomicrobiae bacterium
DG1235]
gi|198256516|gb|EDY80824.1| peptidyl-tRNA hydrolase superfamily [Verrucomicrobiae bacterium
DG1235]
Length = 175
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 5/151 (3%)
Query: 26 IDRIHSFHFFPAWKK--KFHAEISEGQLDGL-RTILIKPQTFMNLSGQSLLEVMNFYKLP 82
++ + + H AWKK K EI+ L + IL+KP TFMN SG + ++ +FYK+P
Sbjct: 2 VEALAAKHGADAWKKDRKLKGEIATLSSSKLGKQILVKPTTFMNESGVCVQKLCSFYKIP 61
Query: 83 NLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDT-AH 141
E +V++D+++L G ++L G GHNGL I + + R+R+GIG PD
Sbjct: 62 P-EEVIVVYDEINLSVGEVKLSMSGSAGGHNGLADILGRIAPRFARIRVGIGAKPDKEVP 120
Query: 142 IIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ +VLGNFS+ + + +D S+ LL
Sbjct: 121 LADYVLGNFSNDDASVVAASMDRYVESIELL 151
>gi|1127573|gb|AAB06185.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi]
Length = 194
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L+G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLADGLRAPLREEPKFFGYTSRITLEGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G N+ RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKE 179
>gi|90581722|ref|ZP_01237509.1| peptidyl-tRNA hydrolase [Vibrio angustum S14]
gi|90437076|gb|EAS62280.1| peptidyl-tRNA hydrolase [Vibrio angustum S14]
Length = 196
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 94/177 (53%), Gaps = 8/177 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG EY RHN G ++ R+H+ P K+ +G L+
Sbjct: 7 LLVGLANPGQEYANTRHNAGAWVVEELARVHNVSLRP--DPKYFGLTGRITANGQDLRLL 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMNLSG+S+ + NF+++ E LV HD+LDL G + K GGG GHNGL+ I
Sbjct: 65 IPSTFMNLSGKSVAALANFFQI-KPEEILVAHDELDLPPGVAKFKKGGGHGGHNGLRDII 123
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
K G K++ RLRI IG P D + +VLG + E+ + +D R + +L K
Sbjct: 124 SKMGNNKDFYRLRIAIGHPGDKNKVAGYVLGKAPAKEQELIDAAVDESVRCIDILLK 180
>gi|315453576|ref|YP_004073846.1| peptidyl-tRNA hydrolase [Helicobacter felis ATCC 49179]
gi|315132628|emb|CBY83256.1| peptidyl-tRNA hydrolase [Helicobacter felis ATCC 49179]
Length = 191
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 96/179 (53%), Gaps = 8/179 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNP Y RHN+GF +D + + F A+K H + L L+K
Sbjct: 1 MRLVVGLGNPTPTYAHTRHNVGFDVLDLL-AHRFGVAFKGNAHYLYA--TLPQHACYLLK 57
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSGQ+L + ++ N++ LV+HDDLDL G LR K GGG+ GHNGLKSI E
Sbjct: 58 PMTYMNLSGQALSMFLRHHE--NIDTLLVVHDDLDLPLGALRFKQGGGNGGHNGLKSIEE 115
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K + +L+IGIGR D HVL F + E + +L + +D +
Sbjct: 116 HYQKTFFKLKIGIGRGADAR---SHVLQCFEATEETHKNEVFKQALEALSFYLEHDDFA 171
>gi|238755540|ref|ZP_04616878.1| Peptidyl-tRNA hydrolase [Yersinia ruckeri ATCC 29473]
gi|238706220|gb|EEP98599.1| Peptidyl-tRNA hydrolase [Yersinia ruckeri ATCC 29473]
Length = 196
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 105/190 (55%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +DR+ S + + KF+ + L G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWFVDRLAESNNQSLKEESKFYGYTARLNLAGQDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG+++ + +FY+ LP E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 66 STFMNLSGKAVSAMASFYRILP--EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N+ RLRIGIG P D + + VLG + E+ + ID R +L K +
Sbjct: 124 QLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQALIDETIDEAIRCTDVLLKEDVT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|157376600|ref|YP_001475200.1| peptidyl-tRNA hydrolase [Shewanella sediminis HAW-EB3]
gi|189038166|sp|A8FYZ9|PTH_SHESH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157318974|gb|ABV38072.1| Aminoacyl-tRNA hydrolase [Shewanella sediminis HAW-EB3]
Length = 194
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 91/173 (52%), Gaps = 4/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y + RHN G + + K++ + L G L+ P
Sbjct: 6 LIVGLANPGDKYAQTRHNAGAWYVQELARVCGATLVADSKYYGLTARVTLHGKDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I K
Sbjct: 66 STFMNLSGKSVGALANFFRIEP-EEILVAHDELDMQPGVAKFKLGGGHGGHNGLKDIIAK 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
N + RLRIGIG P D + +VLG + E+ + +ID RS LL
Sbjct: 125 LANNKGFYRLRIGIGHPGDKNQVSNYVLGKAPASEQTLIETVIDEAVRSTELL 177
>gi|258544624|ref|ZP_05704858.1| aminoacyl-tRNA hydrolase [Cardiobacterium hominis ATCC 15826]
gi|258520132|gb|EEV88991.1| aminoacyl-tRNA hydrolase [Cardiobacterium hominis ATCC 15826]
Length = 190
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 96/172 (55%), Gaps = 6/172 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y + RHN GF +D++ + A KKF E + L L+KP
Sbjct: 4 LIVGLGNPGARYQKTRHNAGFWLLDQLAAAEGGRLAEDKKFQGEYGKIALAYQPVHLLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ + FY L E LV+HD+LDL G ++LK GGG GHNGL+ I
Sbjct: 64 LTFMNASGRAVSALAKFYDLAP-EEILVVHDELDLQEGAVKLKYGGGHGGHNGLRDIIAA 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K++ RLR+GI P D ++ +VL P + I D IAR L +L
Sbjct: 123 LGSKDFYRLRLGINHPGDRNQVVDYVL---HPPGKAEQEKIDDAIARGLAIL 171
>gi|257094306|ref|YP_003167947.1| peptidyl-tRNA hydrolase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257046830|gb|ACV36018.1| Aminoacyl-tRNA hydrolase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 191
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 103/174 (59%), Gaps = 9/174 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISE-GQLDGLRTILIK 60
++ GLGNPG EY +NRHN+GF ID++ P A + KF ++ G+L L++
Sbjct: 6 LIVGLGNPGGEYEDNRHNVGFWFIDQLAQRLRAPLAPQGKFLGRVARVGEL-----WLLQ 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSGQ++ + FYK+ + LV+HDDLDL GT RLK GGG+ GHNGLK I
Sbjct: 61 PMTYMNLSGQAVAALARFYKI-GADETLVVHDDLDLPPGTTRLKLGGGNGGHNGLKDIQA 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
+ ++ RLR+GIG P + ++ +VL E+ + ID + P LA
Sbjct: 120 RLATPDFWRLRLGIGHPGERDAVVGYVLKAPRREEQELIDRAIDRCLLAWPDLA 173
>gi|328947529|ref|YP_004364866.1| peptidyl-tRNA hydrolase [Treponema succinifaciens DSM 2489]
gi|328447853|gb|AEB13569.1| Peptidyl-tRNA hydrolase [Treponema succinifaciens DSM 2489]
Length = 220
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 97/183 (53%), Gaps = 30/183 (16%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEIS----EGQLDGLRTI- 57
++A LGN G EY RHN+ ++ +++ F +W+ K +E S E L+ L+
Sbjct: 4 LIAFLGNYGKEYSGTRHNVPWIFEEQL-PFASKISWQSKHKSEFSCVDYEDFLNWLKDFS 62
Query: 58 ---------------------LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDL 96
+KP T+MNLSG+++ E F+K+ EN L++HD+++L
Sbjct: 63 LIKLRQDGTLPIASNVPDKIYFMKPLTYMNLSGEAVGEAARFFKI-KPENILILHDEIEL 121
Query: 97 DFGTLRLKTGGGDAGHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
GT+ LK GG GHNGL+SI E G ++ RLR G+G+P + + VLG FS E+
Sbjct: 122 PLGTVSLKWSGGLGGHNGLRSIKEHLGTADFWRLRFGVGKPVHGS-VADFVLGIFSEDEK 180
Query: 156 YFL 158
L
Sbjct: 181 IIL 183
>gi|145298187|ref|YP_001141028.1| peptidyl-tRNA hydrolase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142850959|gb|ABO89280.1| peptidyl-tRNA hydrolase [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 203
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G ++++ +H ++ KF + Q++G L+ P
Sbjct: 12 LIVGLGNPGPEYAKTRHNAGAWYVEQLARWHNVSLREEPKFFGHTARIQVEGQDVRLLIP 71
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK I +
Sbjct: 72 NTYMNLSGKAVAALARFYQI-EPEAMLVAHDELDLPPGIAKFKQGGGHGGHNGLKDIIAR 130
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLR+GIG P + VL S E+ + +D R+ +L K++
Sbjct: 131 MGNNNNFFRLRLGIGHPGAKELVAGFVLTKAPSSEQNLIDAALDKSLRATDILFKQDMTK 190
Query: 180 FLNHIVSVR 188
+N + S +
Sbjct: 191 AMNRLHSFK 199
>gi|120555279|ref|YP_959630.1| aminoacyl-tRNA hydrolase [Marinobacter aquaeolei VT8]
gi|166199357|sp|A1U374|PTH_MARAV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|120325128|gb|ABM19443.1| peptidyl-tRNA hydrolase [Marinobacter aquaeolei VT8]
Length = 196
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTI 57
+ +V GLGNPG +Y RHN G + ++ R P +KK+H + Q GL
Sbjct: 5 IVMVVGLGNPGSDYENTRHNAGALFVEALAREAGQTLRP--EKKYHGLYARIQWQGLDLH 62
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+ P TFMN SG ++ + +F+K+ + E LV HD+LDL GT +LK GGG GHNGL+
Sbjct: 63 LLNPSTFMNRSGTAIKALADFFKI-SPEQILVAHDELDLPPGTAKLKKGGGHGGHNGLRD 121
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G N ++RLR+GIG P D+ + VLG E L + D + R LP A +
Sbjct: 122 TIAHLGTNDFQRLRLGIGHPGDSRKVTGFVLGRLGKQETEQLTAVFDEVMRVLPDAASGK 181
Query: 177 DVSFLNHIVSVR 188
+ +N + S +
Sbjct: 182 LAAAMNRLHSFK 193
>gi|311693596|gb|ADP96469.1| peptidyl-tRNA hydrolase [marine bacterium HP15]
Length = 195
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 105/192 (54%), Gaps = 7/192 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTI 57
+ +V GLGNPG +Y RHN G + ++ R P +KK+H + Q GL
Sbjct: 5 IVMVVGLGNPGADYENTRHNAGALFVEALARTAGQTLRP--EKKYHGLYARIQWQGLDLH 62
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+ P TFMN SG ++ + +F+K+ + L+ HD+LDL GT +LK GGG GHNGL+
Sbjct: 63 LLNPTTFMNRSGLAIKALADFFKI-QPQQILIAHDELDLPPGTAKLKKGGGHGGHNGLRD 121
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G N ++RLRIGIG P D+ + +VLG E L +ID I R LP A +
Sbjct: 122 AIAHLGTNDFQRLRIGIGHPGDSRRVTGYVLGRLGKQETEELNAVIDEIMRVLPDAASGK 181
Query: 177 DVSFLNHIVSVR 188
+ +N + S +
Sbjct: 182 LPAAMNRLHSFK 193
>gi|156393358|ref|XP_001636295.1| predicted protein [Nematostella vectensis]
gi|156223397|gb|EDO44232.1| predicted protein [Nematostella vectensis]
Length = 176
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 94/169 (55%), Gaps = 7/169 (4%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILIKP 61
V GLGN H RH++G ++ + + W KK+ ++ Q+ IL+KP
Sbjct: 1 VVGLGN--HSMPNTRHSVGMAVVNHL-AEKLGAEWSFSKKYQGYLAMTQIPQQNIILLKP 57
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-ISE 120
+ MN++G+S++ V++ Y + + +++HD+LD G +K GG GH G+KS I++
Sbjct: 58 KLLMNVNGRSIVRVVSAYNI-QPSHVILVHDELDKALGKFSIKYGGSAGGHKGVKSSINQ 116
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
RLR+GIGRP D + + +VL +FS E+ L +++ ++++
Sbjct: 117 LMSLEMVRLRVGIGRPVDRSQVSDYVLQDFSESEKPILTCVLEECSQTI 165
>gi|271500551|ref|YP_003333576.1| peptidyl-tRNA hydrolase [Dickeya dadantii Ech586]
gi|270344106|gb|ACZ76871.1| peptidyl-tRNA hydrolase [Dickeya dadantii Ech586]
Length = 195
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 98/185 (52%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +DR+ + P + KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAATRHNAGAWYVDRLADAYRQPLKEESKFFGYTARLSLAGNDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ + LV HD+LDL G +LK GGG GHNGLK I K
Sbjct: 66 TTFMNLSGKAVAAMATFYRI-QPDEILVAHDELDLPPGVAKLKLGGGHGGHNGLKDIVSK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P D ++ VLG E+ + ID R +L K + V
Sbjct: 125 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQTLIDQAIDESLRCTDILMKEDMVK 184
Query: 180 FLNHI 184
+N +
Sbjct: 185 AMNRL 189
>gi|50121111|ref|YP_050278.1| peptidyl-tRNA hydrolase [Pectobacterium atrosepticum SCRI1043]
gi|68052943|sp|Q6D557|PTH_ERWCT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|49611637|emb|CAG75086.1| peptidyl-tRNA hydrolase [Pectobacterium atrosepticum SCRI1043]
Length = 195
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 98/185 (52%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +DR+ S+ + KF S L G L+ P
Sbjct: 6 LIVGLANPGAEYAATRHNAGAWFVDRLAESYRQSLKEESKFFGYTSRLNLAGQDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ + LV HD+LDL G +LK GGG GHNGLK I K
Sbjct: 66 TTFMNLSGKAVAAMATFYRI-QPDEILVAHDELDLLPGIAKLKLGGGHGGHNGLKDIISK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P D + + VLG E+ + ID R +L K + +
Sbjct: 125 LGNNPNFHRLRIGIGHPGDKSKVTGFVLGKPPMSEQTLIDEAIDEAVRCTEILMKEDMIK 184
Query: 180 FLNHI 184
+N +
Sbjct: 185 AMNRL 189
>gi|87301942|ref|ZP_01084776.1| peptidyl-tRNA hydrolase [Synechococcus sp. WH 5701]
gi|87283510|gb|EAQ75465.1| peptidyl-tRNA hydrolase [Synechococcus sp. WH 5701]
Length = 208
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 102/187 (54%), Gaps = 19/187 (10%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI--HSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN+GFM +D++ F A K I++ R L+K
Sbjct: 13 LLIGLGNPGEKYAQTRHNVGFMALDQLAQRDGASFRA-NGKLQGTIADLGQGSDRLRLLK 71
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P T+MN SG+S+ ++++ L + LV+ DD+DL G LRL+ G GHNGL+S IS
Sbjct: 72 PSTYMNESGRSIRATLDWFGL-RPDQMLVLVDDMDLPLGRLRLRRSGSAGGHNGLRSTIS 130
Query: 120 EKCGKNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+++ RLRIGIG P A I HVLG F + E LP++ + L
Sbjct: 131 HLGSQDFARLRIGIGAPALDPALRKARTISHVLGRFEADE----LPLLQQV-----LTEV 181
Query: 175 REDVSFL 181
E VSF+
Sbjct: 182 LEGVSFI 188
>gi|291408311|ref|XP_002720515.1| PREDICTED: peptidyl-tRNA hydrolase 1 homolog [Oryctolagus
cuniculus]
Length = 231
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 92/187 (49%), Gaps = 18/187 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKK--KFHAEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W + + A+++ L + +L
Sbjct: 48 WLVAGLGNPG--LPGTRHSVGMAVLGQLARRLGVAESWARDPRCAADLALAPLGDAQLVL 105
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS- 117
++P+ MN +G+S+ + L YLV HD+LD G L LK GG GHNG+ S
Sbjct: 106 LRPRRLMNSNGRSVARAAELFGLTADAVYLV-HDELDKPLGKLALKLGGSARGHNGVCSC 164
Query: 118 ISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
IS RLR+GIGRP + HVLG FS E+ LPLL R
Sbjct: 165 ISCLNSSAMPRLRVGIGRPATADAVQAHVLGRFSPAEQEL-----------LPLLLDRAT 213
Query: 178 VSFLNHI 184
L+HI
Sbjct: 214 DLLLDHI 220
>gi|224052914|ref|XP_002297633.1| predicted protein [Populus trichocarpa]
gi|222844891|gb|EEE82438.1| predicted protein [Populus trichocarpa]
Length = 210
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 84/156 (53%), Gaps = 15/156 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG ++ RHN ++ ++ P K F EG + +L KP
Sbjct: 23 WLFVGLGNPGEKFKGTRHN-AWISMN-------IPLCKALF----GEGFVGDAPVLLAKP 70
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QT+MNLSG+S + +YKLP L +V HDD++L G LRL+ GG H GLKS+
Sbjct: 71 QTYMNLSGESAGPLAAYYKLP-LNRVIVFHDDMELPCGVLRLQEKGGHGCHRGLKSVINH 129
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + + RLRIGIGRPP +L F++ R
Sbjct: 130 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATAR 165
>gi|92113646|ref|YP_573574.1| peptidyl-tRNA hydrolase [Chromohalobacter salexigens DSM 3043]
gi|119390925|sp|Q1QXD3|PTH_CHRSD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|91796736|gb|ABE58875.1| peptidyl-tRNA hydrolase [Chromohalobacter salexigens DSM 3043]
Length = 194
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 92/170 (54%), Gaps = 4/170 (2%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKPQ 62
+ GLGNPG EY RHN G ++ + P ++KF + ++ + G L+ P
Sbjct: 7 IIGLGNPGTEYDATRHNAGAWVVEALARDSLTPLRAERKFLGQYAKVRYAGHDVHLLVPS 66
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG+++ + F+KL + L+ HD+LD+ GT R K GGG GHNGL+
Sbjct: 67 TYMNRSGKAVAALCQFFKL-TPDELLIAHDELDIAPGTARYKHGGGHGGHNGLRDTVSAL 125
Query: 123 G--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G K++ RLRIGIG P ++ +VLG ER + ID R+LP
Sbjct: 126 GNDKSFHRLRIGIGHPGSAKQVVNYVLGRPGKAERAAIDAAIDECLRTLP 175
>gi|85059859|ref|YP_455561.1| peptidyl-tRNA hydrolase [Sodalis glossinidius str. 'morsitans']
gi|119391010|sp|Q2NRR9|PTH_SODGM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|84780379|dbj|BAE75156.1| peptidyl-tRNA hydrolase [Sodalis glossinidius str. 'morsitans']
Length = 194
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 100/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G ++ + + + KF+ L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVELLAERYRQTLKEESKFYGYTGRLTLGGQDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E+ LV HD+LDL G+ RLK GGG GHNGLK I +
Sbjct: 65 TTFMNLSGKAVAAMATFYRIAP-EDILVAHDELDLLPGSARLKLGGGHGGHNGLKDIISR 123
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + RLRIGI P D ++ VLG + ER + ID R +L ++ V
Sbjct: 124 LGNNPQFHRLRIGISHPGDKNQVVGFVLGKPPTAERQLIDSAIDEAVRCTEILVTQDAVK 183
Query: 180 FLNHIVSVR 188
+N + + R
Sbjct: 184 AMNRLHAYR 192
>gi|289647280|ref|ZP_06478623.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. aesculi str.
2250]
Length = 194
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 95/173 (54%), Gaps = 8/173 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY + RHN G ++RI + + P ++KF G L+
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVP--ERKFFGLTGHFTHQGQDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I+
Sbjct: 64 IPTTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIT 122
Query: 120 EKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ G + RLR+GIG P D + + VLG E+ L ID LP
Sbjct: 123 AQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|260598223|ref|YP_003210794.1| peptidyl-tRNA hydrolase [Cronobacter turicensis z3032]
gi|260217400|emb|CBA31466.1| Peptidyl-tRNA hydrolase [Cronobacter turicensis z3032]
Length = 192
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 91/170 (53%), Gaps = 4/170 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILI 59
M ++ GL NPG EY RHN G +D + P ++ KF S ++G L+
Sbjct: 1 MKLIVGLANPGAEYAATRHNAGAWYVDLLADRFRAPLKEEAKFFGYTSRININGNDVRLL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK I
Sbjct: 61 VPTTFMNLSGKAVAAMATFYRIAPDE-ILVAHDELDLPPGVAKFKLGGGHGGHNGLKDII 119
Query: 120 EKCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
K G N+ RLR+GIG P D ++ VLG E+ + +D AR
Sbjct: 120 SKLGNNPNFHRLRLGIGHPGDKNKVVGFVLGKPPVSEQKLIDDAVDEAAR 169
>gi|24372767|ref|NP_716809.1| peptidyl-tRNA hydrolase [Shewanella oneidensis MR-1]
gi|38503270|sp|Q8EHN5|PTH_SHEON RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|24346845|gb|AAN54254.1|AE015562_4 peptidyl-tRNA hydrolase [Shewanella oneidensis MR-1]
Length = 195
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + K+ + L G L+ P
Sbjct: 6 LIVGLANPGAEYVQTRHNAGAWYVEELARICGVSLVADSKYFGLTARAVLHGKDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I K
Sbjct: 66 TTYMNLSGKAVGALANFFRI-TPEEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIAK 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
KN+ RLRIGIG P D + +VLG + E+ + +D RS +L K + V
Sbjct: 125 LANDKNFYRLRIGIGHPGDKNKVSGYVLGKAPAKEQELINAAVDEAVRSTEILFKEDMVK 184
Query: 180 FLNHIVSVR 188
+ + S +
Sbjct: 185 AMTRLHSFK 193
>gi|94676649|ref|YP_588743.1| peptidyl-tRNA hydrolase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|119390913|sp|Q1LTH1|PTH_BAUCH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|94219799|gb|ABF13958.1| peptidyl-tRNA hydrolase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 193
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG++Y RHN+G ++++ +++H K F + R L+ P
Sbjct: 5 LIVGLANPGNKYLLTRHNVGSWYVNQLANNYHVSLINKSSFLGYTGYLNIGKRRIFLLIP 64
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
FMN +GQ++ + FY +P E L+ HD+L+ G R K GG GHNGLK +
Sbjct: 65 TIFMNYNGQAVAAIAKFYNIMP--EEILIAHDELNFLPGYARFKYSGGHGGHNGLKDVIY 122
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVL 147
+ G N+ RLRIGIG P D +I+ VL
Sbjct: 123 RLGDNNNFYRLRIGIGHPGDKNKVIKFVL 151
>gi|294142161|ref|YP_003558139.1| peptidyl-tRNA hydrolase [Shewanella violacea DSS12]
gi|293328630|dbj|BAJ03361.1| peptidyl-tRNA hydrolase [Shewanella violacea DSS12]
Length = 194
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 99/191 (51%), Gaps = 8/191 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG +Y + RHN G + RI K++ + L G L+
Sbjct: 6 LIVGLANPGEKYAQTRHNAGAWYVQELARICGATLIA--DSKYYGLTARVSLHGKDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMNLSG+S+ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 64 IPSTFMNLSGKSVGAMANFFRIQAGE-ILVAHDELDMPPGVAKFKLGGGHGGHNGLKDII 122
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G K + RLRIGIG P D + +VLG + E+ + P++D RS +L +
Sbjct: 123 SSLGNDKGFHRLRIGIGHPGDRNQVSNYVLGKAPAVEQTQIEPVLDEAVRSTQILFTEDM 182
Query: 178 VSFLNHIVSVR 188
+N + S +
Sbjct: 183 AKAMNRLHSFK 193
>gi|241661894|ref|YP_002980254.1| peptidyl-tRNA hydrolase [Ralstonia pickettii 12D]
gi|240863921|gb|ACS61582.1| peptidyl-tRNA hydrolase [Ralstonia pickettii 12D]
Length = 200
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ + + +FH + L G L++P
Sbjct: 4 LIVGLGNPGAEYAATRHNAGFWLVDQLARMGNVTLRNETRFHGYAARANLWGNEVWLLQP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QTFMN SG + + + FYK +P + LV+HD+LDL G ++LK GGG GHNGLK I+
Sbjct: 64 QTFMNRSGLATVALARFYKVMP--DEILVVHDELDLPPGAVKLKLGGGSGGHNGLKDIAA 121
Query: 121 K-CGKNYKRLRIGIGR-----PPDTAHIIRHVLGNF 150
+ + RLR+GIG PP TA +H + NF
Sbjct: 122 HLTTQQFWRLRLGIGHPRNLLPPGTAASGQHDVANF 157
>gi|110833377|ref|YP_692236.1| peptidyl-tRNA hydrolase [Alcanivorax borkumensis SK2]
gi|119390907|sp|Q0VS84|PTH_ALCBS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110646488|emb|CAL15964.1| aminoacyl-tRNA hydrolase [Alcanivorax borkumensis SK2]
Length = 195
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G +D + F KK+ + +G L+ P
Sbjct: 7 LIVGLGNPGREYEDTRHNAGVWYVDALARRQGVFLTEDKKYFGLTATFSFEGETIRLLVP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ+ + NF+K+P + LV HD+LDL G R K GGG GHNGL+ I +
Sbjct: 67 TTFMNRSGQATAALANFFKIP-VTQILVAHDELDLPPGCARFKQGGGHGGHNGLRDIISR 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G +++ RLR+GIG P + HVL S +R + ID
Sbjct: 126 HGNSRDFYRLRLGIGHPGSADRVTPHVLSKPSKADRDLIDRAID 169
>gi|303250512|ref|ZP_07336709.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307251554|ref|ZP_07533461.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|302650500|gb|EFL80659.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306861018|gb|EFM93024.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
Length = 194
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 96/175 (54%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y + RHN G I+ I F+ + KF ++++ G L+ P
Sbjct: 6 LIVGLANPGTKYEDTRHNAGEWLINEIARQFNVSLKEEAKFFGKVAKINAAGGEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LV HD+LDL G ++K GGG GHNGLK I
Sbjct: 66 TTFMNLSGKAVGALANFYRIKP-EEILVAHDELDLPLGVAKIKQGGGHGGHNGLKDIIAS 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ R+RIGIG P + +VLG S ++ + +D R + LL K
Sbjct: 125 LGNSNNFYRVRIGIGHPGSKELVAGYVLGKPSPQDQEKINAAVDEAGRCVDLLLK 179
>gi|326796207|ref|YP_004314027.1| peptidyl-tRNA hydrolase [Marinomonas mediterranea MMB-1]
gi|326546971|gb|ADZ92191.1| Peptidyl-tRNA hydrolase [Marinomonas mediterranea MMB-1]
Length = 194
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 104/190 (54%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G I+ + +KKF E ++ + G L+ P
Sbjct: 6 LLVGLGNPGSEYENTRHNAGAQWIEALARQSQCSLRSEKKFFGEFAKAYIGGEECYLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
T+MNLSG+S+ V FYK LP E LVIHD+LD+ GT++LK GGG GHNGLK I
Sbjct: 66 TTYMNLSGKSVQAVCQFYKILP--EQVLVIHDELDIPPGTVKLKKGGGHGGHNGLKDIIS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P + + +VL + E + ID R + + E
Sbjct: 124 KLGNNRDFGRLRIGIGHPGHASQVASYVLKKAPTEEYDQIEKTIDESLRYCDDIVRGELS 183
Query: 179 SFLNHIVSVR 188
+ +NH+ S +
Sbjct: 184 NAMNHLHSFK 193
>gi|323187434|gb|EFZ72743.1| peptidyl-tRNA hydrolase [Escherichia coli RN587/1]
Length = 194
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ + + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFFRI-SPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 171
>gi|30519902|ref|NP_848710.1| probable peptidyl-tRNA hydrolase [Mus musculus]
gi|81913689|sp|Q8BW00|PTH_MOUSE RecName: Full=Probable peptidyl-tRNA hydrolase; Short=PTH
gi|26344690|dbj|BAC35994.1| unnamed protein product [Mus musculus]
gi|68085781|gb|AAH98218.1| Peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) [Mus musculus]
gi|123858283|emb|CAM16629.1| peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) [Mus musculus]
gi|148676630|gb|EDL08577.1| peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) [Mus musculus]
Length = 204
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 88/167 (52%), Gaps = 7/167 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKK--KFHAEISEGQLDGLRTIL 58
++VAGLGN H RH++G + +I W + + A+++ L + +L
Sbjct: 21 WLVAGLGN--HGMPGTRHSVGMAVLGQIARRLGVAENWTRDSRCAADLALAPLGDAQLVL 78
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS- 117
++P+ MN++G+S+ + L E YLV HD+LD G L LK GG GHNG++S
Sbjct: 79 LRPRRLMNVNGRSVARAAELFGLTAEEIYLV-HDELDKPLGKLALKLGGSARGHNGVRSC 137
Query: 118 ISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
IS RL +GIGRP + HVLG FS E+ L P++D
Sbjct: 138 ISCLNSNAMPRLLVGIGRPTHPNMVENHVLGCFSPEEQELLSPLMDQ 184
>gi|224073398|ref|XP_002194186.1| PREDICTED: similar to peptidyl-tRNA hydrolase 1 homolog
[Taeniopygia guttata]
Length = 632
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 59/156 (37%), Positives = 84/156 (53%), Gaps = 7/156 (4%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWK--KKFHAEISEGQLDGLRTILIK 60
VAGLGN G RH++G +D++ W+ ++ A+++ GL +L+K
Sbjct: 21 VAGLGNYGLR--GTRHSVGMEVLDQLARQLAVAEGWRVDRRCCADVALATAHGLELVLLK 78
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-IS 119
P+ FMNL+G S+ Y L + YLV HDDLD G + +K GG GHNG++S IS
Sbjct: 79 PRRFMNLNGLSVASAAEIYSLGPKDIYLV-HDDLDKALGKVAIKLGGSARGHNGVQSCIS 137
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
RLRIGIGRP + +VL F++ ER
Sbjct: 138 ALHSNEMTRLRIGIGRPEGDVTVPSYVLSPFTAGER 173
>gi|163752629|ref|ZP_02159804.1| peptidyl-tRNA hydrolase [Shewanella benthica KT99]
gi|161327482|gb|EDP98693.1| peptidyl-tRNA hydrolase [Shewanella benthica KT99]
Length = 194
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 98/187 (52%), Gaps = 8/187 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG +Y + RHN G + RI + K++ + L G L+
Sbjct: 6 LIVGLANPGEKYAQTRHNAGAWYVQELARICTATLIA--DSKYYGLTARVNLHGKDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMNLSG+S+ + NF+++ + LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 64 IPSTFMNLSGKSVGAMANFFRI-QADEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDII 122
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G K + RLRIGIG P D + + +VLG + E+ + ++D RS LL +
Sbjct: 123 ASLGNDKGFYRLRIGIGHPGDRSQVSNYVLGKAPAVEQIQIETVLDEAVRSTELLFTEDM 182
Query: 178 VSFLNHI 184
+N +
Sbjct: 183 AKAMNRL 189
>gi|68052930|sp|Q6AJL9|PTH_DESPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 197
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 104/175 (59%), Gaps = 9/175 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY + RHN G + +D + S +K+++ + ++ G L++P
Sbjct: 6 YLLVGLGNPGREYQDTRHNAGSLLLDDLSSRWSGSNSIEKYNSTFRKARVAGNSLALMQP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG ++ E + F+K+ EN +VIHDD+D+ G ++L GGG GHNG+KSI+
Sbjct: 66 LTYMNRSGLAVAEYVRFFKIV-AENIIVIHDDIDMAPGRVKLVRGGGAGGHNGIKSINSS 124
Query: 122 CG-KNYKRLRIGIGRP------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +Y RL+IG+GRP P+ + ++VL FS+ + ++ D IA L
Sbjct: 125 LGFVDYYRLKIGVGRPGKHGIHPEIP-VDKYVLAPFSAEQLDIIVGRYDAIAAGL 178
>gi|261749651|ref|YP_003257337.1| peptidyl-tRNA hydrolase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497744|gb|ACX84194.1| peptidyl-tRNA hydrolase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 198
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 92/154 (59%), Gaps = 3/154 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG Y + RHN+GF+ +D+I +F KK IS+ +KP
Sbjct: 10 FLITGLGNPGFLYQKTRHNLGFLILDKISEKYFLSFSIKKL-GFISKLIYKEKLLFFLKP 68
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T++N SG+S+ MN K+ LEN LVI DD+ L+FG +RL+ GGD GHNGLKSI ++
Sbjct: 69 STYVNESGKSVKYWMNKKKIA-LENILVISDDIYLNFGNIRLRGKGGDGGHNGLKSIEKE 127
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + Y R+R GI + I +VLGN+ E
Sbjct: 128 LGTSHYARMRFGIKNHFYQDNKIDYVLGNWKEEE 161
>gi|24112603|ref|NP_707113.1| peptidyl-tRNA hydrolase [Shigella flexneri 2a str. 301]
gi|30062728|ref|NP_836899.1| peptidyl-tRNA hydrolase [Shigella flexneri 2a str. 2457T]
gi|46576792|sp|Q83LE1|PTH_SHIFL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|24051507|gb|AAN42820.1| peptidyl-tRNA hydrolase [Shigella flexneri 2a str. 301]
gi|30040976|gb|AAP16706.1| peptidyl-tRNA hydrolase [Shigella flexneri 2a str. 2457T]
gi|281600628|gb|ADA73612.1| Peptidyl-tRNA hydrolase [Shigella flexneri 2002017]
gi|313649393|gb|EFS13824.1| peptidyl-tRNA hydrolase [Shigella flexneri 2a str. 2457T]
Length = 194
Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 90/168 (53%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGSEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 171
>gi|157145516|ref|YP_001452835.1| peptidyl-tRNA hydrolase [Citrobacter koseri ATCC BAA-895]
gi|166199324|sp|A8AFY6|PTH_CITK8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157082721|gb|ABV12399.1| hypothetical protein CKO_01259 [Citrobacter koseri ATCC BAA-895]
Length = 194
Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L+G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRVTLEGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVGAMASFYRI-MPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIINK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLR+GIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDDAIDEAAR 171
>gi|53718159|ref|YP_107145.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei K96243]
gi|167737030|ref|ZP_02409804.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 14]
gi|167814139|ref|ZP_02445819.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 91]
gi|254187801|ref|ZP_04894313.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei Pasteur 52237]
gi|254296081|ref|ZP_04963538.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 406e]
gi|68052913|sp|Q63XM0|PTH_BURPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|52208573|emb|CAH34509.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei K96243]
gi|157805711|gb|EDO82881.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 406e]
gi|157935481|gb|EDO91151.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei Pasteur 52237]
Length = 201
Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 85/138 (61%), Gaps = 3/138 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLFGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SGQ+++ + +F+K+ E LV HD+LDL G +LK GGG GHNGLK IS
Sbjct: 64 QTYMNRSGQAVVALAHFFKILPTE-ILVAHDELDLPPGAAKLKLGGGSGGHNGLKDISAH 122
Query: 122 -CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 123 LSSQQYWRLRIGIGHPRD 140
>gi|189218768|ref|YP_001939409.1| Peptidyl-tRNA hydrolase [Methylacidiphilum infernorum V4]
gi|259535210|sp|B3E0Q7|PTH_METI4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189185626|gb|ACD82811.1| Peptidyl-tRNA hydrolase [Methylacidiphilum infernorum V4]
Length = 186
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
IV GLGNPG EY + RHNIG+ ++ + + F K K E + + +
Sbjct: 6 IVVGLGNPGQEYEKTRHNIGWRVVEELVKRQNLSFKIDKKAKSKVAFKE------KLVFV 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSGQ+L ++ K + ++ LVI DD+ L G LR + G GH GL+SI
Sbjct: 60 LPLTYMNLSGQALSYLLQKEKCSS-KDILVILDDISLPLGKLRFRPKGSSGGHKGLESII 118
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
E+ ++ RLR+GIG P+ + +VL F E+
Sbjct: 119 EELHTEDIPRLRLGIGPLPEGEQLADYVLKPFLEEEK 155
>gi|76809605|ref|YP_332165.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 1710b]
gi|124384025|ref|YP_001027483.1| peptidyl-tRNA hydrolase [Burkholderia mallei NCTC 10229]
gi|126439060|ref|YP_001057620.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 668]
gi|126448794|ref|YP_001082449.1| peptidyl-tRNA hydrolase [Burkholderia mallei NCTC 10247]
gi|126453669|ref|YP_001064866.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 1106a]
gi|134279603|ref|ZP_01766315.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 305]
gi|167718013|ref|ZP_02401249.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei DM98]
gi|167822664|ref|ZP_02454135.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 9]
gi|167844235|ref|ZP_02469743.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei B7210]
gi|167892745|ref|ZP_02480147.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 7894]
gi|167909459|ref|ZP_02496550.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 112]
gi|167917487|ref|ZP_02504578.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei BCC215]
gi|217419442|ref|ZP_03450948.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei 576]
gi|226199544|ref|ZP_03795101.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei Pakistan 9]
gi|237810770|ref|YP_002895221.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei MSHR346]
gi|242317999|ref|ZP_04817015.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei 1106b]
gi|254181867|ref|ZP_04888464.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 1655]
gi|254196577|ref|ZP_04903001.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei S13]
gi|254261190|ref|ZP_04952244.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei 1710a]
gi|254357506|ref|ZP_04973780.1| peptidyl-tRNA hydrolase [Burkholderia mallei 2002721280]
gi|119390918|sp|Q3JW88|PTH_BURP1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199313|sp|A3MQB3|PTH_BURM7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199314|sp|A2S6B4|PTH_BURM9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199316|sp|A3NR95|PTH_BURP0 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199317|sp|A3N5J9|PTH_BURP6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|76579058|gb|ABA48533.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 1710b]
gi|124292045|gb|ABN01314.1| aminoacyl-tRNA hydrolase [Burkholderia mallei NCTC 10229]
gi|126218553|gb|ABN82059.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei 668]
gi|126227311|gb|ABN90851.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 1106a]
gi|126241664|gb|ABO04757.1| aminoacyl-tRNA hydrolase [Burkholderia mallei NCTC 10247]
gi|134248803|gb|EBA48885.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 305]
gi|148026570|gb|EDK84655.1| peptidyl-tRNA hydrolase [Burkholderia mallei 2002721280]
gi|169653320|gb|EDS86013.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei S13]
gi|184212405|gb|EDU09448.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 1655]
gi|217396746|gb|EEC36762.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei 576]
gi|225928425|gb|EEH24455.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei Pakistan 9]
gi|237506418|gb|ACQ98736.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei MSHR346]
gi|242141238|gb|EES27640.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei 1106b]
gi|254219879|gb|EET09263.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei 1710a]
Length = 201
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 85/138 (61%), Gaps = 3/138 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLFGEEVHLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SGQ+++ + +F+K+ E LV HD+LDL G +LK GGG GHNGLK IS
Sbjct: 64 QTYMNRSGQAVVALAHFFKILPTE-ILVAHDELDLPPGAAKLKLGGGSGGHNGLKDISAH 122
Query: 122 -CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 123 LSSQQYWRLRIGIGHPRD 140
>gi|187918639|ref|YP_001884205.1| peptidyl-tRNA hydrolase [Borrelia hermsii DAH]
gi|238689298|sp|B2S1C9|PTH_BORHD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119861487|gb|AAX17282.1| peptidyl-tRNA hydrolase [Borrelia hermsii DAH]
Length = 188
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 85/153 (55%), Gaps = 4/153 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG + RHN+GF +D + + + KK + E S+ + R +LIKP
Sbjct: 4 LIVGLGNPGSNFFHTRHNVGFELVDNLVIKNGL-SLKKVKNYEYSDFNFENKRIVLIKPL 62
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG V + + + N LV+ D++DL G +L+ GG + HNGL+SIS
Sbjct: 63 TYMNLSGNIFPSVFAKFYMK-IANLLVVVDNVDLPLGKCKLRKVGGTSTHNGLRSISLSL 121
Query: 123 GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G NY RL IG+G +++ + VL F E
Sbjct: 122 GSTNYGRLYIGVGSNNESS-LREFVLAKFRGSE 153
>gi|300705253|ref|YP_003746856.1| peptidyl-tRNA hydrolase [Ralstonia solanacearum CFBP2957]
gi|299072917|emb|CBJ44273.1| peptidyl-tRNA hydrolase [Ralstonia solanacearum CFBP2957]
Length = 200
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 97/180 (53%), Gaps = 12/180 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ H + + H + L G L++P
Sbjct: 4 LIVGLGNPGAEYAATRHNAGFWLVDQLARMGHVTLRNETRVHGYAARATLWGHDVWLLQP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QTFMN SG + + + FYK LP + LV HD+LDL G ++LK GGG GHNGLK I+
Sbjct: 64 QTFMNRSGLATVALARFYKILP--DEILVAHDELDLPPGAVKLKLGGGSGGHNGLKDIAA 121
Query: 121 K-CGKNYKRLRIGIGR-----PPDTAHIIRHVLGNF--SSPERYFLLPIIDNIARSLPLL 172
+ + RLR+GIG PP TA +H + NF +P R I I RSL L
Sbjct: 122 HLTTQQFWRLRLGIGHPRNLLPPGTAPSGQHDVANFVLKAPRREEQELIDRAIDRSLDAL 181
>gi|301060861|ref|ZP_07201670.1| aminoacyl-tRNA hydrolase [delta proteobacterium NaphS2]
gi|300445035|gb|EFK08991.1| aminoacyl-tRNA hydrolase [delta proteobacterium NaphS2]
Length = 191
Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 100/194 (51%), Gaps = 20/194 (10%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--------- 51
M+++AGLGNPG Y RHN+G +++ W K A + G+
Sbjct: 1 MYLIAGLGNPGPPYEHTRHNVGLKSVEQ---------WGKSLGATLRNGRFCSKHALVNF 51
Query: 52 DGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG 111
G + IL+ P TFMN SG+S+ + +++Y L L+ LVIHDDLDL G +++ GG G
Sbjct: 52 RGTKIILLCPLTFMNRSGESVGDCLHYYDLA-LDRLLVIHDDLDLPLGRIKVIKHGGAGG 110
Query: 112 HNGLKSISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
H G+ SI E G + + R++IGIGRP I +VL +F E+ +I +
Sbjct: 111 HKGVLSIIEILGSSEFSRVKIGIGRPCHGEPIADYVLSDFYDNEKKLAENVIRTAIDAAE 170
Query: 171 LLAKREDVSFLNHI 184
+ + +NHI
Sbjct: 171 MFVLEGVQTAMNHI 184
>gi|114777714|ref|ZP_01452674.1| peptidyl-tRNA hydrolase [Mariprofundus ferrooxydans PV-1]
gi|114551930|gb|EAU54464.1| peptidyl-tRNA hydrolase [Mariprofundus ferrooxydans PV-1]
Length = 185
Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 101/183 (55%), Gaps = 20/183 (10%)
Query: 7 LGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
+GNPG +Y E RHNIGF +D + F A +FHAE + R +L+KPQT
Sbjct: 1 MGNPGSKYEETRHNIGFRFLDLLAKSEGLRFDAA--PRFHAETAVWNRPEGRVLLVKPQT 58
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC- 122
FMN SG+S+ + +Y++ + +V++DDLDL G LRLK GGG GHNGL+S+++
Sbjct: 59 FMNNSGESVAALARYYQV-ETDQIVVVYDDLDLPAGKLRLKHGGGHGGHNGLRSLNQHLP 117
Query: 123 GKNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPER-------YFLLPIIDNI-ARSLPLL 172
NY R + GIGRP AH I VLG +R LL ID I + LP
Sbjct: 118 DNNYIRAKAGIGRP---AHGDITPWVLGRADEGDRADEARVFAALLNEIDTILSGQLPQA 174
Query: 173 AKR 175
A R
Sbjct: 175 ANR 177
>gi|150020071|ref|YP_001305425.1| aminoacyl-tRNA hydrolase [Thermosipho melanesiensis BI429]
gi|149792592|gb|ABR30040.1| Aminoacyl-tRNA hydrolase [Thermosipho melanesiensis BI429]
Length = 158
Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 13/134 (9%)
Query: 21 IGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYK 80
+GFM +DRI + W+KK++ E S + L+KP T+MNLSG E+ N+
Sbjct: 1 MGFMFLDRIAN-----NWRKKYNYEFSIKE----NLFLVKPLTYMNLSG----EIFNYIN 47
Query: 81 LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTA 140
+ + +V++DD+ L G +R++ G GH G+KSI G ++ R+RIGIG PD
Sbjct: 48 PKDFGDIIVVYDDVSLPLGKIRIRKKGSHGGHKGVKSIISHLGTDFNRIRIGIGPLPDNE 107
Query: 141 HIIRHVLGNFSSPE 154
++ VLG FS+ E
Sbjct: 108 DLVNFVLGEFSNRE 121
>gi|296190876|ref|XP_002743381.1| PREDICTED: probable peptidyl-tRNA hydrolase-like [Callithrix
jacchus]
Length = 228
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 84/169 (49%), Gaps = 7/169 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRT--IL 58
++VAGLGNPG RH++G + ++ +W + H +L
Sbjct: 45 WMVAGLGNPG--LPGTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALALLGDAQLVL 102
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN +G+S+ + L E YLV HD+LD G L LK GG GHNG++S
Sbjct: 103 LRPRRLMNANGRSVARAAELFGLTAEEVYLV-HDELDKPLGKLALKLGGSARGHNGVRSC 161
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
N RLR+GIGRP + HVLG+FS E+ L ++D A
Sbjct: 162 INCLNSNAMPRLRVGIGRPTHPEAVQAHVLGSFSPAEQELLPLLLDRAA 210
>gi|251789668|ref|YP_003004389.1| peptidyl-tRNA hydrolase [Dickeya zeae Ech1591]
gi|247538289|gb|ACT06910.1| peptidyl-tRNA hydrolase [Dickeya zeae Ech1591]
Length = 195
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 98/185 (52%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +DR+ + P + KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAATRHNAGAWYVDRLAEAYRQPLKEESKFFGYTARLSLAGNDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ + LV HD+LDL G +LK GGG GHNGLK I K
Sbjct: 66 TTFMNLSGKAVAAMATFYRI-QPDEILVAHDELDLLPGVAKLKLGGGHGGHNGLKDIVSK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P D ++ VLG E+ + ID R +L K + +
Sbjct: 125 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQTLIDQAIDESLRCTDILMKEDMIK 184
Query: 180 FLNHI 184
+N +
Sbjct: 185 AMNRL 189
>gi|28868317|ref|NP_790936.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|37999393|sp|Q888C8|PTH_PSESM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|28851554|gb|AAO54631.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 194
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 94/173 (54%), Gaps = 8/173 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY + RHN G ++RI + + P ++KF G L+
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVP--ERKFFGLTGRFTHQGQDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I
Sbjct: 64 IPTTYMNRSGQAVAALAGFYRIP-IESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDII 122
Query: 120 EKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ G + RLR+GIG P D + + VLG E+ L ID LP
Sbjct: 123 AQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|76630832|ref|XP_582005.2| PREDICTED: peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)-like
isoform 2 [Bos taurus]
gi|297480754|ref|XP_002691673.1| PREDICTED: peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)-like
isoform 1 [Bos taurus]
gi|296482109|gb|DAA24224.1| peptidyl-tRNA hydrolase 1 homolog-like isoform 1 [Bos taurus]
Length = 225
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKK--KFHAEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W++ + A++++ L + +L
Sbjct: 31 WLVAGLGNPG--LPGTRHSVGMAVLGQLARRLGVAESWERDRRCAADLAQASLGDAQLVL 88
Query: 59 IKPQTFMNLSGQSLLEVM-----------NFYKLPNLENYLVIHDDLDLDFGTLRLKTGG 107
++P+ MNL+G S+ + + + L E YLV HD+LD G + LK GG
Sbjct: 89 LRPRRLMNLNGHSVAQAVVTGATVSLGQVELFGLTAEEVYLV-HDELDKPLGKVALKLGG 147
Query: 108 GDAGHNGLKSISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
GHNG++S N RL++GIGRP + +VLG FS E+ L P+++
Sbjct: 148 SARGHNGVRSCMSCLNSNAMPRLQVGIGRPTHRDAVQAYVLGRFSPAEQELLPPVLE 204
>gi|156933667|ref|YP_001437583.1| peptidyl-tRNA hydrolase [Cronobacter sakazakii ATCC BAA-894]
gi|166199330|sp|A7MNK0|PTH_ENTS8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|156531921|gb|ABU76747.1| hypothetical protein ESA_01489 [Cronobacter sakazakii ATCC BAA-894]
Length = 194
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 90/168 (53%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S ++G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLADRFRAPLKEEAKFFGYTSRINVNGNDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMATFYRIAPDE-ILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLR+GIG P D ++ VLG E+ + +D AR
Sbjct: 124 LGNNPNFHRLRLGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAVDEAAR 171
>gi|71735978|ref|YP_273261.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|213967231|ref|ZP_03395380.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tomato T1]
gi|257482000|ref|ZP_05636041.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|301381033|ref|ZP_07229451.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tomato Max13]
gi|302134875|ref|ZP_07260865.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|302186451|ref|ZP_07263124.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. syringae 642]
gi|119390979|sp|Q48MW1|PTH_PSE14 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71556531|gb|AAZ35742.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|213928073|gb|EEB61619.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tomato T1]
gi|320327398|gb|EFW83412.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330881889|gb|EGH16038.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330899762|gb|EGH31181.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. japonica str.
M301072PT]
gi|330941709|gb|EGH44466.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. pisi str. 1704B]
gi|330972807|gb|EGH72873.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. aceris str.
M302273PT]
gi|330975569|gb|EGH75635.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|331018129|gb|EGH98185.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 194
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 94/173 (54%), Gaps = 8/173 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY + RHN G ++RI + + P ++KF G L+
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVP--ERKFFGLTGRFTHQGQDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I
Sbjct: 64 IPTTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDII 122
Query: 120 EKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ G + RLR+GIG P D + + VLG E+ L ID LP
Sbjct: 123 AQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|160871789|ref|ZP_02061921.1| peptidyl-tRNA hydrolase [Rickettsiella grylli]
gi|159120588|gb|EDP45926.1| peptidyl-tRNA hydrolase [Rickettsiella grylli]
Length = 198
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
++AGL NPG +Y ++RHN G I+ + K+ KFHA IS L ++ ++
Sbjct: 8 LIAGLANPGKDYAKSRHNAGAWLIETLLQQRDLTPLKRENKFHALISAWSLSAVKCWILI 67
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ + +FY +P + L++HDDLDL G R K GGGD GHNGLK I
Sbjct: 68 PTTFMNESGRAIKAIAHFYHIP-VSAILIVHDDLDLLPGIARYKHGGGDGGHNGLKDIMR 126
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
K++ RLR+GIG P + +VL + S ++ + I++ +L L A+
Sbjct: 127 HLQSKDFWRLRLGIGHPGHRDKVHHYVLSSPSIADKQRINQAIEDANSTLRLFAE 181
>gi|51246584|ref|YP_066468.1| peptidyl-tRNA hydrolase [Desulfotalea psychrophila LSv54]
gi|50877621|emb|CAG37461.1| related to peptidyl-tRNA hydrolase (PTH) [Desulfotalea psychrophila
LSv54]
Length = 215
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 104/175 (59%), Gaps = 9/175 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY + RHN G + +D + S +K+++ + ++ G L++P
Sbjct: 24 YLLVGLGNPGREYQDTRHNAGSLLLDDLSSRWSGSNSIEKYNSTFRKARVAGNSLALMQP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG ++ E + F+K+ EN +VIHDD+D+ G ++L GGG GHNG+KSI+
Sbjct: 84 LTYMNRSGLAVAEYVRFFKIV-AENIIVIHDDIDMAPGRVKLVRGGGAGGHNGIKSINSS 142
Query: 122 CG-KNYKRLRIGIGRP------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G +Y RL+IG+GRP P+ + ++VL FS+ + ++ D IA L
Sbjct: 143 LGFVDYYRLKIGVGRPGKHGIHPEIP-VDKYVLAPFSAEQLDIIVGRYDAIAAGL 196
>gi|206602647|gb|EDZ39128.1| Peptidyl-tRNA hydrolase [Leptospirillum sp. Group II '5-way CG']
Length = 187
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 87/172 (50%), Gaps = 8/172 (4%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
+ GLGNPG EY RHN G + +D + P +K + EG+ G + IL+ P T
Sbjct: 6 IIGLGNPGREYERTRHNAGKIFLDSLSERVGIPLNHQKPIVQWGEGEWKGEKLILVFPLT 65
Query: 64 FMNLSGQSLLEV-MNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
+MNLSG+ + + M LP+ + LVI DD+D+ G LR + G G GL SI +
Sbjct: 66 YMNLSGKVIPWLRMKGVHLPD--DLLVILDDMDIPLGMLRFREKGRSGGQKGLSSIIDAL 123
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL----LPIIDNIARSL 169
G + R++IGIGRP + +VLG E L P D + R L
Sbjct: 124 GGDRISRIKIGIGRPIEGQDPSDYVLGALHPEESRLLEKARQPFFDIVDRWL 175
>gi|253997199|ref|YP_003049263.1| peptidyl-tRNA hydrolase [Methylotenera mobilis JLW8]
gi|253983878|gb|ACT48736.1| peptidyl-tRNA hydrolase [Methylotenera mobilis JLW8]
Length = 191
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 98/177 (55%), Gaps = 12/177 (6%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEIS----EGQLD-GLRTILIK 60
GLGNPG +Y RHN GF ID++ + A K + G+L + LIK
Sbjct: 9 GLGNPGEKYAATRHNAGFWWIDQVAA-----ATNSKLAVDAKFFGFAGKLSPTADSWLIK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ + N+YK+ E LVIHD+LDL G++++K GGG GHNGL+ I
Sbjct: 64 PTTFMNASGKAVAALANYYKISPAE-ILVIHDELDLPAGSIKMKFGGGHGGHNGLRDIHS 122
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G +Y RLR+GIG P ++ VL + E++ + I + + + L+ K E
Sbjct: 123 ALGTADYWRLRVGIGHPGSKNEVVNFVLKAPTKDEQHVIDDSIYDSCKLVDLMLKGE 179
>gi|254482885|ref|ZP_05096122.1| peptidyl-tRNA hydrolase [marine gamma proteobacterium HTCC2148]
gi|214036966|gb|EEB77636.1| peptidyl-tRNA hydrolase [marine gamma proteobacterium HTCC2148]
Length = 195
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 91/173 (52%), Gaps = 4/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++AGLGNPG EY RHN G ++ + P + KF G LI P
Sbjct: 6 LIAGLGNPGSEYRGTRHNAGADFVEELARQCSTPLQAESKFFGLAGRVNYAGYDLRLIIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ + +FYK+ E L+ HD+LD+ GT R K GGG GHNGL+ I
Sbjct: 66 TTFMNRSGKAVAAIASFYKIAP-EEILIAHDELDIPAGTARFKQGGGHGGHNGLRDIVPA 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G KN+ RLRIGI P + + +VL S +R + ID +LPLL
Sbjct: 125 LGNNKNFHRLRIGIDHPGHASKVSGYVLSQPSQVDRTRIEACIDEAIAALPLL 177
>gi|127513848|ref|YP_001095045.1| peptidyl-tRNA hydrolase [Shewanella loihica PV-4]
gi|166229452|sp|A3QH38|PTH_SHELP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|126639143|gb|ABO24786.1| peptidyl-tRNA hydrolase [Shewanella loihica PV-4]
Length = 195
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y + RHN G ++ + K++ + L G L+ P
Sbjct: 6 LIVGLANPGDKYEQTRHNAGAWYVNELARVCGVSLVADSKYYGLTARATLYGKDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + NF+++ + LV HD+LD+ G + K GGG GHNGLK I K
Sbjct: 66 TTFMNLSGKSVGALANFFRIAP-DEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIAK 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K + RLRIGIG P D + + +VLG E+ + +ID R+ +L K ED+S
Sbjct: 125 LANDKGFYRLRIGIGHPGDKSMVSNYVLGKAPQTEQRLIEEVIDEAVRATEVLFK-EDMS 183
Query: 180 FLNH 183
H
Sbjct: 184 KAMH 187
>gi|281340092|gb|EFB15676.1| hypothetical protein PANDA_004444 [Ailuropoda melanoleuca]
Length = 198
Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 16/165 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++VAGLGNPG RH++G + ++ ++ A+++ L + +L++P
Sbjct: 27 WLVAGLGNPG--LPGTRHSVGLAVLGQLA--------QRLGAADLALASLGDAQLVLLRP 76
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-ISE 120
MN +G+S+ + L E YLV HD+LD G L LK GG GH G++S I+
Sbjct: 77 WRLMNNNGRSVARAAELFGLTAEEVYLV-HDELDKPLGKLALKLGGSSRGHKGVRSCITC 135
Query: 121 KCGKNYKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIID 163
RLR+GIGRP PDT HVLG FS+ E+ L P+++
Sbjct: 136 LNSSAMPRLRVGIGRPTHPDTVQA--HVLGYFSAAEKELLPPLLE 178
>gi|295675402|ref|YP_003603926.1| peptidyl-tRNA hydrolase [Burkholderia sp. CCGE1002]
gi|295435245|gb|ADG14415.1| peptidyl-tRNA hydrolase [Burkholderia sp. CCGE1002]
Length = 201
Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 86/139 (61%), Gaps = 5/139 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G +D++ +++FH ++ +L G L++P
Sbjct: 4 LIVGLGNPGAEYTATRHNAGCWLVDQLAREAGTTLRDERRFHGFYAKARLHGEEVHLLQP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
QT+MN SGQS++ + F+K LP+ LV HD+LD+ G+++LK GGG GHNGLK IS
Sbjct: 64 QTYMNRSGQSVVALAQFFKILPD--EILVAHDELDMPPGSVKLKLGGGSGGHNGLKDISA 121
Query: 121 K-CGKNYKRLRIGIGRPPD 138
+ Y RLRIGIG P D
Sbjct: 122 HLSSQQYWRLRIGIGHPRD 140
>gi|330828696|ref|YP_004391648.1| peptidyl-tRNA hydrolase [Aeromonas veronii B565]
gi|328803832|gb|AEB49031.1| Peptidyl-tRNA hydrolase [Aeromonas veronii B565]
Length = 198
Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 102/189 (53%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G ++++ +H ++ KF + ++G L+ P
Sbjct: 7 LIVGLGNPGPEYAKTRHNAGAWYVEQLARWHNVSLREEPKFFGHTARILVEGQDVRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 67 NTYMNLSGKAVAALARFYQI-EPEAILVAHDELDLPPGIAKFKQGGGHGGHNGLKDIIAK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLR+GIG P + VL S E+ + +D R+ +L K++
Sbjct: 126 MGNNNNFFRLRLGIGHPGSKELVAGFVLTKAPSSEQNLIDAALDESLRATDILFKQDMTK 185
Query: 180 FLNHIVSVR 188
+N + S +
Sbjct: 186 AMNRLHSFK 194
>gi|66044195|ref|YP_234036.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. syringae B728a]
gi|81308516|sp|Q4ZXX4|PTH_PSEU2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|63254902|gb|AAY35998.1| Peptidyl-tRNA hydrolase [Pseudomonas syringae pv. syringae B728a]
Length = 194
Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 93/173 (53%), Gaps = 8/173 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH---FFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY + RHN G ++RI + P ++KF G L+
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVDLVP--ERKFFGLTGRFTHQGQDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I
Sbjct: 64 IPTTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDII 122
Query: 120 EKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ G + RLR+GIG P D + + VLG E+ L ID LP
Sbjct: 123 AQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|269102021|ref|ZP_06154718.1| peptidyl-tRNA hydrolase [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268161919|gb|EEZ40415.1| peptidyl-tRNA hydrolase [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 196
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + K+ +G L+ P
Sbjct: 7 LLVGLANPGQEYAKTRHNAGAWVVEELARVHNVTLREDAKYFGLTGRITTNGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+++ E LV HD+LDL G + K GGG GHNGL+ I K
Sbjct: 67 TTFMNLSGKSVAALAKFFQI-QPEEILVAHDELDLPPGVAKFKKGGGHGGHNGLRDIISK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K++ RLRIGIG P D + VLG + E+ + +D R + +L K
Sbjct: 126 MGNNKDFYRLRIGIGHPGDKNKVAGFVLGKAPAKEQELIDAAVDEAVRCMDILLK 180
>gi|301761926|ref|XP_002916374.1| PREDICTED: probable peptidyl-tRNA hydrolase-like [Ailuropoda
melanoleuca]
Length = 195
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 16/165 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++VAGLGNPG RH++G + ++ ++ A+++ L + +L++P
Sbjct: 15 WLVAGLGNPG--LPGTRHSVGLAVLGQLA--------QRLGAADLALASLGDAQLVLLRP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-ISE 120
MN +G+S+ + L E YLV HD+LD G L LK GG GH G++S I+
Sbjct: 65 WRLMNNNGRSVARAAELFGLTAEEVYLV-HDELDKPLGKLALKLGGSSRGHKGVRSCITC 123
Query: 121 KCGKNYKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIID 163
RLR+GIGRP PDT HVLG FS+ E+ L P+++
Sbjct: 124 LNSSAMPRLRVGIGRPTHPDTVQA--HVLGYFSAAEKELLPPLLE 166
>gi|53729108|ref|ZP_00134069.2| COG0193: Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126207521|ref|YP_001052746.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae L20]
gi|307244834|ref|ZP_07526933.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|307253788|ref|ZP_07535642.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|307258244|ref|ZP_07539987.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 11
str. 56153]
gi|307260485|ref|ZP_07542179.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 12
str. 1096]
gi|166199299|sp|A3MYA5|PTH_ACTP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|126096313|gb|ABN73141.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
gi|306854279|gb|EFM86485.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|306863272|gb|EFM95212.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|306867704|gb|EFM99549.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 11
str. 56153]
gi|306869797|gb|EFN01580.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 12
str. 1096]
Length = 194
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 96/175 (54%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y + RHN G I+ I F+ + KF ++++ G L+ P
Sbjct: 6 LIVGLANPGTKYEDTRHNAGEWLINEIARQFNVSLKEEAKFFGKVAKINAAGGEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LV HD+LDL G ++K GGG GHNGLK I
Sbjct: 66 TTFMNLSGKAVGALANFYRI-KPEEILVAHDELDLPPGVAKIKQGGGHGGHNGLKDIIAS 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ R+RIGIG P + +VLG S ++ + +D R + LL K
Sbjct: 125 LGNSNNFYRVRIGIGHPGSKELVAGYVLGKPSPQDQEKINAAVDEAGRCVDLLLK 179
>gi|168241369|ref|ZP_02666301.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194450126|ref|YP_002045828.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|238690687|sp|B4TKB3|PTH_SALHS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|194408430|gb|ACF68649.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205339480|gb|EDZ26244.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 194
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L+G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLR+GIG P D + ++ VLG E+ + I AR L K
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKSKVVGFVLGKPPVSEQKLIDEAIYEAARCTELWFK 178
>gi|123442673|ref|YP_001006650.1| peptidyl-tRNA hydrolase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|166229466|sp|A1JRW1|PTH_YERE8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|122089634|emb|CAL12484.1| peptidyl-tRNA hydrolase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 197
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 102/190 (53%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLALRHNQQLKEESKFFGYTARLNLAGQDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG+++ + FY+ LP E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 66 STFMNLSGKAVAAMAGFYRILP--EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N+ RLRIGIG P D + + VLGN + E+ + ID R +L K +
Sbjct: 124 KLGNNPNFYRLRIGIGHPGDKSKVTGFVLGNPPASEQTLIDDAIDESIRCTEVLLKEDIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|330873314|gb|EGH07463.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 194
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 94/173 (54%), Gaps = 8/173 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY + RHN G ++RI + + P ++KF G L+
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVP--ERKFFGLTGRFTHQGQDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I
Sbjct: 64 IPTTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDII 122
Query: 120 EKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ G + RLR+GIG P D + + VLG E+ L ID LP
Sbjct: 123 AQLGNQNTFHRLRLGIGHPCDASKVSGFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|331008860|gb|EGH88916.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 194
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 94/173 (54%), Gaps = 8/173 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY + RHN G ++RI + + P ++KF G L+
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVP--ERKFFGLTGRFTHQGQDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I
Sbjct: 64 IPTTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDII 122
Query: 120 EKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ G + RLR+GIG P D + + VLG E+ L ID LP
Sbjct: 123 AQLGNQNTFHRLRLGIGPPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|118594522|ref|ZP_01551869.1| peptidyl-tRNA hydrolase [Methylophilales bacterium HTCC2181]
gi|118440300|gb|EAV46927.1| peptidyl-tRNA hydrolase [Methylophilales bacterium HTCC2181]
Length = 190
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 87/149 (58%), Gaps = 4/149 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
+ GLGNPG +Y RHN GF ID + H K K+ E S Q +G +KP
Sbjct: 6 LFVGLGNPGDKYLTTRHNAGFWWIDFVALNHRLSFKKSSKYFGEHSNYQDNG-DIHFLKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+S+ + FYK+ E L+IHD+LD+ G ++LK GGG GHNG+K IS +
Sbjct: 65 STFMNDSGKSVQAITKFYKIKP-EEILIIHDELDIIPGKVKLKLGGGHGGHNGVKDISNQ 123
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGN 149
G N + RLRIGIG P D + +VL N
Sbjct: 124 LGSNNFWRLRIGIGHPGDKNEVSDYVLKN 152
>gi|330951111|gb|EGH51371.1| peptidyl-tRNA hydrolase [Pseudomonas syringae Cit 7]
Length = 175
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 94/173 (54%), Gaps = 8/173 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY + RHN G ++RI + + P ++KF G L+
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVP--ERKFFGLTGRFTHQGQDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I
Sbjct: 64 IPTTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDII 122
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ G + RLR+GIG P D + + VLG E+ L ID LP
Sbjct: 123 AQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|301631687|ref|XP_002944929.1| PREDICTED: peptidyl-tRNA hydrolase-like [Xenopus (Silurana)
tropicalis]
Length = 199
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 88/157 (56%), Gaps = 7/157 (4%)
Query: 6 GLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
GLGNPG EY RHN GF ID R + P ++ + ++ + G L++PQ
Sbjct: 7 GLGNPGPEYEATRHNAGFCWIDALARELGANLVP--ERGYWGLVARTSVQGESRWLLQPQ 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S+ + F+K+ E LV HD+LD G ++LK GGG GHNGL+ I +
Sbjct: 65 TFMNLSGKSVAALARFFKIAP-EEILVAHDELDFAPGQIKLKCGGGHGGHNGLRDIHAQL 123
Query: 123 GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G +Y RLRIGIG P A ++ VL +R +
Sbjct: 124 GSADYWRLRIGIGHPGVKAEVLHWVLKKPPPDQRTLI 160
>gi|289627925|ref|ZP_06460879.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|330868891|gb|EGH03600.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 194
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 94/173 (54%), Gaps = 8/173 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY + RHN G ++RI + + P ++KF G L+
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVP--ERKFFGLTGHFTHQGQDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I
Sbjct: 64 IPTTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDII 122
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ G + RLR+GIG P D + + VLG E+ L ID LP
Sbjct: 123 AQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|116327329|ref|YP_797049.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116120073|gb|ABJ78116.1| Aminoacyl-tRNA hydrolase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 187
Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NR NIGF +D I + KK + I G +G +L+K
Sbjct: 1 MKLIVGLGNPGDRYNNNRSNIGFKILDVIANNINVEIKTKKKKSLIGRGDFEGEEVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTF +LSG+S+L + +F K+ + LVI +D L G + + G + H G+KSI +
Sbjct: 61 PQTFSDLSGESVLYIASFLKI-QVGEILVIQEDWTLTLGRIVVDKGTQETDHPGVKSIVQ 119
Query: 121 KC-GKNYKRLRIGI 133
N+ R+RIGI
Sbjct: 120 SLRSPNFIRIRIGI 133
>gi|254796687|ref|YP_003081523.1| peptidyl-tRNA hydrolase [Neorickettsia risticii str. Illinois]
gi|254589913|gb|ACT69275.1| peptidyl-tRNA hydrolase [Neorickettsia risticii str. Illinois]
Length = 168
Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 85/149 (57%), Gaps = 3/149 (2%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
M ID I FP + KF +S G++ L KP FMN SG+ L++++NFYK+
Sbjct: 1 MLIDYIRCTFSFPEFLPKFSGLLSSGRVSSSLLYLFKPVAFMNNSGRPLVQLVNFYKVEP 60
Query: 84 LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHII 143
EN +V HDD+DLDF +++K GGG GHNGLKS+ G++Y R R G+GR
Sbjct: 61 -ENVIVFHDDIDLDFAKVKIKRGGGSGGHNGLKSLDANLGRDYWRFRFGVGR--GVGEPA 117
Query: 144 RHVLGNFSSPERYFLLPIIDNIARSLPLL 172
HVL F+S E L + I +LPLL
Sbjct: 118 EHVLSCFTSLELERLNKLFGFIGTNLPLL 146
>gi|146306087|ref|YP_001186552.1| peptidyl-tRNA hydrolase [Pseudomonas mendocina ymp]
gi|166229438|sp|A4XR54|PTH_PSEMY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145574288|gb|ABP83820.1| peptidyl-tRNA hydrolase [Pseudomonas mendocina ymp]
Length = 196
Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 94/171 (54%), Gaps = 4/171 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++R+ S A +K+ + + G L+ P
Sbjct: 6 LIVGLGNPGPEYDQTRHNAGALFVERVAESQRVNLAVDRKYFGLVGKFNHQGREVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + NF+K+ E LV HD+LD+ G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALANFFKI-KPEEILVAHDELDMPPGVAKLKQGGGHGGHNGLRDIISQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G N+ RLR+GIG P + + +VLG E+ L ID LP
Sbjct: 125 LGNQNNFHRLRLGIGHPGHASLVSGYVLGRAPRSEQELLDQSIDFALDVLP 175
>gi|189485711|ref|YP_001956652.1| peptidyl-tRNA hydrolase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287670|dbj|BAG14191.1| peptidyl-tRNA hydrolase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 194
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHF--FPAWKKKFHAEISEGQLDGLRTILIKPQT 63
GLGNPG +Y RHN+GF+ +D I F W AE+S R +KP T
Sbjct: 12 GLGNPGQKYENTRHNLGFIILDEIVDLKHLKFKMWND--MAEVSFYGEPDFRVWFLKPVT 69
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC- 122
FMNLSG ++ YK+ E V +DD + FG R+K G GHNG+ SI E
Sbjct: 70 FMNLSGIAVSSFAKCYKI-KPEEIFVFYDDFLIPFGEYRVKMSGSSGGHNGMSSIIESLH 128
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
N R+++GIG P VL F+ ++
Sbjct: 129 SDNLPRMKLGIGPLPKFIPAADFVLSKFAREDK 161
>gi|302060385|ref|ZP_07251926.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tomato K40]
Length = 173
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 92/166 (55%), Gaps = 8/166 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY + RHN G ++RI + + P ++KF G L+
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVP--ERKFFGLTGRFTHQGQDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I
Sbjct: 64 IPTTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDII 122
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+ G + RLR+GIG P D + + VLG E+ L ID
Sbjct: 123 AQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASID 168
>gi|291614809|ref|YP_003524966.1| peptidyl-tRNA hydrolase [Sideroxydans lithotrophicus ES-1]
gi|291584921|gb|ADE12579.1| peptidyl-tRNA hydrolase [Sideroxydans lithotrophicus ES-1]
Length = 192
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 96/161 (59%), Gaps = 9/161 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY RHN GF +D R H+ +F KFH ++ + G L+
Sbjct: 7 LIVGLGNPGSEYEATRHNAGFWWLDELAREHNANFRT--DNKFHGLVARTTMHGHEVHLL 64
Query: 60 KPQTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
KPQTFMN+SG++++ + FYK LPN LV+HD+LDL G +LK GGG GHNGLK I
Sbjct: 65 KPQTFMNVSGRAVVALALFYKILPN--QILVVHDELDLPPGGAKLKLGGGHGGHNGLKDI 122
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G K + RLRIGIG P + A ++ +VL E+ +
Sbjct: 123 IAHLGTKEFWRLRIGIGHPGERAEVVNYVLKAPRKEEQVLI 163
>gi|289678417|ref|ZP_06499307.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. syringae FF5]
Length = 188
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 93/172 (54%), Gaps = 8/172 (4%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG EY + RHN G ++RI + + P ++KF G L+
Sbjct: 1 IVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVP--ERKFFGLTGRFTHQGQDVRLLI 58
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I
Sbjct: 59 PTTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIA 117
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ G + RLR+GIG P D + + VLG E+ L ID LP
Sbjct: 118 QLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLP 169
>gi|237809048|ref|YP_002893488.1| peptidyl-tRNA hydrolase [Tolumonas auensis DSM 9187]
gi|259535291|sp|C4L932|PTH_TOLAT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|237501309|gb|ACQ93902.1| peptidyl-tRNA hydrolase [Tolumonas auensis DSM 9187]
Length = 197
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G + + ++ K+ Q++G L+ P
Sbjct: 7 LIVGLGNPGPEYANTRHNAGAWYVASLAERYNGSLREDPKYFGLTGRIQINGQDVRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S++ + F+++P E+ LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 67 TTFMNLSGKSVVALAKFFQIPP-ESILVAHDELDLPPGVAKFKQGGGHGGHNGLKDIINK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + RLR+GIG P ++ VL E+ + +D R+ +L +
Sbjct: 126 LGNNNQFHRLRLGIGHPGTKEQVVGFVLTKAPKAEQQLIDDALDEAVRATDILFTNDMTK 185
Query: 180 FLNHIVSVR 188
+N + S +
Sbjct: 186 AMNRLHSFK 194
>gi|320532197|ref|ZP_08033063.1| peptidyl-tRNA hydrolase [Actinomyces sp. oral taxon 171 str. F0337]
gi|320135575|gb|EFW27657.1| peptidyl-tRNA hydrolase [Actinomyces sp. oral taxon 171 str. F0337]
Length = 184
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 11/166 (6%)
Query: 14 YCENRHNIGFMCIDRI--HSFHFFPAWKKKFHAEISEGQL-------DGLRTILIKPQTF 64
Y NRHN+G++ +D + + F + KK A ++EG+L G R IL +P
Sbjct: 1 YARNRHNVGYLVLDVLAERTGSRF-SQHKKARARVAEGRLGMMPGGAPGPRVILAEPSVL 59
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG- 123
MNLSG + ++++Y + LV+HD+LDL LRLK GGG+ GHNGL+SIS+
Sbjct: 60 MNLSGGPVAGLVSYYGIDPASRLLVVHDELDLPAHDLRLKRGGGEGGHNGLRSISKSVST 119
Query: 124 KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
K+Y RLR+GIGRPP VL +F ER L ++ A ++
Sbjct: 120 KDYARLRVGIGRPPGRQDPSDFVLSDFPGRERADLGVTLEQAADAV 165
>gi|116332056|ref|YP_801774.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116125745|gb|ABJ77016.1| Aminoacyl-tRNA hydrolase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 187
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NR NIGF +D I + KK + I G +G +L+K
Sbjct: 1 MKLIVGLGNPGDRYNNNRSNIGFKILDVIANNINVEIKTKKKKSLIGRGDFEGEEVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTF +LSG+S+L + +F K+ + LVI +D L G + + G + H G+KSI +
Sbjct: 61 PQTFSDLSGESVLYIASFLKI-QVGEILVIQEDWTLPLGRIVVDKGTQETDHPGVKSIVQ 119
Query: 121 KC-GKNYKRLRIGI 133
N+ R+RIGI
Sbjct: 120 SLRSPNFIRIRIGI 133
>gi|298485674|ref|ZP_07003753.1| Peptidyl-tRNA hydrolase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298159700|gb|EFI00742.1| Peptidyl-tRNA hydrolase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 194
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 8/173 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG +Y + RHN G ++RI + + P ++KF G L+
Sbjct: 6 LIVGLGNPGAQYEQTRHNAGAFFVERIAAAQRVNLVP--ERKFFGLTGRFTHQGQDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I
Sbjct: 64 IPTTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDII 122
Query: 120 EKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ G + RLR+GIG P D + + VLG E+ L ID LP
Sbjct: 123 AQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|170728022|ref|YP_001762048.1| peptidyl-tRNA hydrolase [Shewanella woodyi ATCC 51908]
gi|238688643|sp|B1KDV1|PTH_SHEWM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169813369|gb|ACA87953.1| Aminoacyl-tRNA hydrolase [Shewanella woodyi ATCC 51908]
Length = 194
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 95/185 (51%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y + RHN G + + K+ + L G L+ P
Sbjct: 6 LIVGLANPGEKYAQTRHNAGAWYVQELARVCGATLVADSKYFGLTARVTLHGKDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + NF+++ + LV HD+LD++ G + K GGG GHNGLK I
Sbjct: 66 STFMNLSGKSVGAMANFFRI-EADEILVAHDELDMEPGVAKFKLGGGHGGHNGLKDIIAS 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
N + RLRIGIG P D + + +VLG E+ + +ID RS +L ++
Sbjct: 125 LANNKGFYRLRIGIGHPGDKSQVSNYVLGKAPGTEQAAIEDVIDEAVRSTEVLFNQDMAK 184
Query: 180 FLNHI 184
+N +
Sbjct: 185 AMNRL 189
>gi|226946188|ref|YP_002801261.1| peptidyl-tRNA hydrolase [Azotobacter vinelandii DJ]
gi|259535141|sp|C1DEV7|PTH_AZOVD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226721115|gb|ACO80286.1| peptidyl-tRNA hydrolase [Azotobacter vinelandii DJ]
Length = 194
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 94/171 (54%), Gaps = 4/171 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++R+ S + KK+ + + G L+ P
Sbjct: 6 LIVGLGNPGPEYEQTRHNAGALFVERVASAKGVRLSADKKYFGLVGKFSHQGRDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + NF+++P LV HD+LD+ GT RLK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALANFFRIPPAA-ILVAHDELDMPPGTARLKQGGGHGGHNGLRDIIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G ++ RLR+GIG P D + VLG E+ L ID LP
Sbjct: 125 FGNQNSFYRLRLGIGHPGDKNLVSGFVLGRAPRSEQEKLEACIDFALDVLP 175
>gi|209694367|ref|YP_002262295.1| peptidyl-tRNA hydrolase [Aliivibrio salmonicida LFI1238]
gi|226694246|sp|B6EHH0|PTH_ALISL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|208008318|emb|CAQ78470.1| peptidyl-tRNA hydrolase [Aliivibrio salmonicida LFI1238]
Length = 196
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G ++ + H P ++ KF Q +G L+ P
Sbjct: 7 LLVGLANPGLEYKRTRHNAGAWVVEELARIHNIPMREEAKFFGLTGRIQTNGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGL+ K
Sbjct: 67 TTFMNLSGKAIASIAKFYQI-KPEEILVAHDELDLPPGVAKFKKGGGHGGHNGLRDTISK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
K + RLRIGIG P + VLG + E+ + +D R L +L K
Sbjct: 126 LANTKEFYRLRIGIGHPGHKDKVAGFVLGKAPTKEQELIDAAVDESTRCLDILLK 180
>gi|320094384|ref|ZP_08026170.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319978685|gb|EFW10242.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 200
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 92/162 (56%), Gaps = 9/162 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL-------DGL 54
++V GLGNPG +Y RHN+G + ID + + + +++ +L G
Sbjct: 8 WLVVGLGNPGAQYASTRHNVGHLTIDVLAARAGAVLKTHRSRTRVADVRLGVGPGGVPGP 67
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L + +T+MN +G + + +F + + LV+HDDLDL LRLK GGG+ GHNG
Sbjct: 68 RAVLARSETYMNTTGGPIRRLADFLGI-GAQRILVVHDDLDLPPHELRLKAGGGEGGHNG 126
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
LKS+++ G ++Y RLRIGIGRPP +VL + ER
Sbjct: 127 LKSLTQALGTRDYHRLRIGIGRPPGRMDPADYVLAPIPAKER 168
>gi|237799720|ref|ZP_04588181.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022575|gb|EGI02632.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 194
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 94/173 (54%), Gaps = 8/173 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY + RHN G ++RI + + P ++KF G L+
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVP--ERKFFGLTGRFTHQGQDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SGQ++ + FY++ +E+ LV HD+LDL G +LKTGGG GHNGL+ I
Sbjct: 64 IPTTYMNRSGQAVAALAGFYRIA-VESILVAHDELDLPPGVAKLKTGGGHGGHNGLRDII 122
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ G + RLR+GIG P D + + VLG E+ L ID LP
Sbjct: 123 AQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|294506807|ref|YP_003570865.1| peptidyl-tRNA hydrolase [Salinibacter ruber M8]
gi|294343135|emb|CBH23913.1| Peptidyl-tRNA hydrolase [Salinibacter ruber M8]
Length = 188
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG EY + RHN+G ID + S + + + A + G+ + L P
Sbjct: 6 LLAIGLGNPGAEYEDTRHNVGHQVIDGL-SGRLDISLQHQSDALVGWGRYVDQKIGLAVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG ++ + Y LP ++ LVI DDL L GT+RL+ G GHNGL ++++
Sbjct: 65 LTYMNRSGDAVAGLRAHYDLP-IDRLLVIVDDLHLPVGTIRLRPTGSSGGHNGLAHVAQR 123
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G ++ RLR+GIG +VL F+ +R
Sbjct: 124 LGTTDFSRLRVGIGNDFPEGRQSDYVLSPFTDEQR 158
>gi|262404529|ref|ZP_06081084.1| peptidyl-tRNA hydrolase [Vibrio sp. RC586]
gi|262349561|gb|EEY98699.1| peptidyl-tRNA hydrolase [Vibrio sp. RC586]
Length = 196
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + KF ++G ++ P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRMLINGQELRVLVP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E +V HD+LDL G + K GGG GHNGLK K
Sbjct: 67 TTFMNLSGKAIAALANFYQI-KPEEIMVAHDELDLPPGIAKFKQGGGHGGHNGLKDTISK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N + RLR+GIG P ++ +VLG + E+ L +D R L +L K
Sbjct: 126 LGNNKEFYRLRLGIGHPGHKDNVAGYVLGKAPTKEQECLDAAVDESVRCLEILMK 180
>gi|90408737|ref|ZP_01216884.1| Peptidyl-tRNA hydrolase [Psychromonas sp. CNPT3]
gi|90310154|gb|EAS38292.1| Peptidyl-tRNA hydrolase [Psychromonas sp. CNPT3]
Length = 196
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 100/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G ++++ S + + KF+ Q G L+ P
Sbjct: 7 LLVGLANPGPEYENTRHNAGQRFLNQLVSQENVHLKAEAKFYGLTGRIQFAGNDLRLLVP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + NFY++ E L+ HD+LDL G + K GGG GHNGL+ I +
Sbjct: 67 TTFMNLSGKSVAAMANFYRIKP-EEILIAHDELDLPPGIAKFKLGGGHGGHNGLRDIISQ 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G KN+ RLRIGIG P D + VLG S E+ + ID AR +L +
Sbjct: 126 LGNNKNFYRLRIGIGHPGDRNRVSGFVLGKASRTEQDLIDQSIDEAARCTLILGQDGLAK 185
Query: 180 FLNHIVSVR 188
+N + S +
Sbjct: 186 AMNRLHSFK 194
>gi|289207532|ref|YP_003459598.1| peptidyl-tRNA hydrolase [Thioalkalivibrio sp. K90mix]
gi|288943163|gb|ADC70862.1| peptidyl-tRNA hydrolase [Thioalkalivibrio sp. K90mix]
Length = 203
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 97/185 (52%), Gaps = 8/185 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG Y E RHN GF +D R +S F + +F E + L L+
Sbjct: 5 LIVGLGNPGPRYAETRHNAGFWFVDALARRYSTEFRS--ESRFDGEGARLTLPEGDCWLL 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP +FMN SG + + +FY++ E LV+HD+LDLD G RLK GGG GHNGL+ +
Sbjct: 63 KPMSFMNKSGLPVRKCADFYRIAP-EEILVVHDELDLDPGVARLKMGGGHGGHNGLRDLH 121
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKRED 177
G NY RLR+GIG P ++ VL + + ID +P L+A R D
Sbjct: 122 RHMGGPNYARLRLGIGHPGHRDDVVPFVLDRPGRDDARAIEDAIDAALDQVPALIAGRWD 181
Query: 178 VSFLN 182
+ N
Sbjct: 182 EAVRN 186
>gi|24216519|ref|NP_714000.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str.
56601]
gi|45656330|ref|YP_000416.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|24197830|gb|AAN51018.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str.
56601]
gi|45599564|gb|AAS69053.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
Length = 187
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NR NIGF +D I + KK + I G +G +L+K
Sbjct: 1 MKLIVGLGNPGDRYNNNRSNIGFKILDVIANNINVEIKTKKKKSLIGRGDFEGEEVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTF +LSG+S+L + +F K+ + LVI +D L G + + G + H G+KSI +
Sbjct: 61 PQTFSDLSGESVLYIASFLKI-QVGEILVIQEDWTLPLGRIVVDKGTQETDHPGVKSIVQ 119
Query: 121 KC-GKNYKRLRIGI 133
N+ R+RIGI
Sbjct: 120 SLRSPNFIRIRIGI 133
>gi|262170837|ref|ZP_06038515.1| peptidyl-tRNA hydrolase [Vibrio mimicus MB-451]
gi|261891913|gb|EEY37899.1| peptidyl-tRNA hydrolase [Vibrio mimicus MB-451]
Length = 196
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + KF ++G ++ P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLINGQELRVLVP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E +V HD+LDL G + K GGG GHNGLK K
Sbjct: 67 TTFMNLSGKAIAALANFYQI-KPEEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTISK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N + RLR+GIG P + +VLG + E+ L +D R L +L K
Sbjct: 126 LGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEILMK 180
>gi|83815615|ref|YP_444949.1| peptidyl-tRNA hydrolase [Salinibacter ruber DSM 13855]
gi|119391001|sp|Q2S4D2|PTH_SALRD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|83757009|gb|ABC45122.1| peptidyl-tRNA hydrolase [Salinibacter ruber DSM 13855]
Length = 188
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG EY + RHN+G ID + S + + + A + G+ + L P
Sbjct: 6 LLAIGLGNPGAEYEDTRHNVGHQVIDGL-SGRLDISLQHQSDALVGWGRYVDQKIGLAVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG ++ + Y LP ++ LVI DDL L GT+RL+ G GHNGL ++++
Sbjct: 65 LTYMNRSGDAVAGLRAHYDLP-IDRLLVIVDDLHLPVGTIRLRPTGSSGGHNGLAHVAQR 123
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + RLR+GIG +VL F+ +R
Sbjct: 124 LGTTEFSRLRVGIGNDFPEGRQSDYVLSPFTDEQR 158
>gi|332161445|ref|YP_004298022.1| peptidyl-tRNA hydrolase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325665675|gb|ADZ42319.1| peptidyl-tRNA hydrolase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330863242|emb|CBX73368.1| peptidyl-tRNA hydrolase [Yersinia enterocolitica W22703]
Length = 197
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 102/190 (53%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLAQRHNQQLKEESKFFGYTARLNLAGQDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG++++ + FY+ LP E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 66 STFMNLSGKAVVAMAGFYRILP--EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N+ RLRIGIG P D + + VLG + E+ + ID R +L K +
Sbjct: 124 KFGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQTLIDDAIDESIRCTEVLLKEDIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 RAMNRLHSFK 193
>gi|332038114|gb|EGI74561.1| peptidyl-tRNA hydrolase [Pseudoalteromonas haloplanktis ANT/505]
Length = 194
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G I++I + ++ K+H + + G L+ P
Sbjct: 6 MLVGLANPGPEYANTRHNAGAWFIEQIAARYNCTLKHDPKYHGLTGKVIIQGQEFKLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + NF+K+P +E+ LV HD+LDLD G +LK GGG GHNGLK I K
Sbjct: 66 TTYMNLSGKAVSSLANFFKIP-VEDILVAHDELDLDPGVAKLKKGGGHGGHNGLKDIIAK 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
K++ RLRIG+G P + VLG + ++ + +D R + +LAK
Sbjct: 125 MANQKDFMRLRIGVGHPGHREMVTGWVLGKAAKEDQEKMDAAVDEAVRCMEILAK 179
>gi|258621060|ref|ZP_05716094.1| Peptidyl-tRNA hydrolase [Vibrio mimicus VM573]
gi|258586448|gb|EEW11163.1| Peptidyl-tRNA hydrolase [Vibrio mimicus VM573]
Length = 196
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + KF ++G ++ P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLVNGQELRVLVP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E +V HD+LDL G + K GGG GHNGLK K
Sbjct: 67 TTFMNLSGKAIAALANFYQI-KPEEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTISK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N + RLR+GIG P + +VLG + E+ L +D R L +L K
Sbjct: 126 LGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEILMK 180
>gi|148245096|ref|YP_001219790.1| peptidyl-tRNA hydrolase [Candidatus Vesicomyosocius okutanii HA]
gi|166229464|sp|A5CVE8|PTH_VESOH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146326923|dbj|BAF62066.1| peptidyl-tRNA hydrolase, PTH1 family [Candidatus Vesicomyosocius
okutanii HA]
Length = 193
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y +RHN+GF D + + K+ KF E+++ + + L+KP
Sbjct: 5 LIVGLGNPGKNYKYHRHNVGFWFCDALAKLYAGNFKKRTKFFGEVTQINIFNHKIQLLKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK-SISE 120
TFMN SGQS+ + NFY++ N + L++HD+L+++ G ++K+GG GHNGLK +I
Sbjct: 65 TTFMNCSGQSIQSIANFYQI-NADEILIVHDELNINPGIAKIKSGGSHGGHNGLKNTIKI 123
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K + RLRIGIG P + I+ VL ++P + L I + + SL ++ EDV
Sbjct: 124 LETKAFYRLRIGIGHPGNKLPIVDFVL---NTPSKDELDKIQNALNNSLQVI---EDV 175
>gi|37679109|ref|NP_933718.1| peptidyl-tRNA hydrolase [Vibrio vulnificus YJ016]
gi|37197851|dbj|BAC93689.1| Peptidyl-tRNA hydrolase [Vibrio vulnificus YJ016]
gi|224184702|gb|ACN39577.1| Pth [Vibrio vulnificus]
Length = 211
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + KF+ ++G L+ P
Sbjct: 22 LLVGLANPGPEYAKTRHNAGAWVVEELARVHNITLKNEAKFYGLTGRIVMNGQELRLLIP 81
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E +V HD+LDL G + K GGG GHNGL+ K
Sbjct: 82 TTFMNLSGKAIAALAKFYQI-QPEEIMVAHDELDLPPGIAKFKKGGGHGGHNGLRDTISK 140
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N + RLRIGIG P + VLG + E+ L +D R L +L K
Sbjct: 141 LGNNKEFYRLRIGIGHPGHKDKVAGFVLGKAPASEQSLLDATVDESVRCLDILIK 195
>gi|320157144|ref|YP_004189523.1| peptidyl-tRNA hydrolase [Vibrio vulnificus MO6-24/O]
gi|326423676|ref|NP_759267.2| peptidyl-tRNA hydrolase [Vibrio vulnificus CMCP6]
gi|31340303|sp|Q8DFF4|PTH_VIBVU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|46576704|sp|Q7MMZ2|PTH_VIBVY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|319932456|gb|ADV87320.1| peptidyl-tRNA hydrolase [Vibrio vulnificus MO6-24/O]
gi|319999031|gb|AAO08794.2| peptidyl-tRNA hydrolase [Vibrio vulnificus CMCP6]
Length = 196
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + KF+ ++G L+ P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARVHNITLKNEAKFYGLTGRIVMNGQELRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E +V HD+LDL G + K GGG GHNGL+ K
Sbjct: 67 TTFMNLSGKAIAALAKFYQI-QPEEIMVAHDELDLPPGIAKFKKGGGHGGHNGLRDTISK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N + RLRIGIG P + VLG + E+ L +D R L +L K
Sbjct: 126 LGNNKEFYRLRIGIGHPGHKDKVAGFVLGKAPASEQSLLDATVDESVRCLDILIK 180
>gi|32491099|ref|NP_871353.1| peptidyl-tRNA hydrolase [Wigglesworthia glossinidia endosymbiont of
Glossina brevipalpis]
gi|31340302|sp|Q8D2K4|PTH_WIGBR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|25166306|dbj|BAC24496.1| pth [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 191
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 4/177 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIKP 61
++ GL NP + Y RHNIG I + + K KK+ + ++ + L+ P
Sbjct: 5 LIVGLSNPINLYYNTRHNIGSWYIKFLAKKYKKNLIKNKKYCFYYIDVKIGDYYSKLVIP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN++G + + NFYK+ + E L++HDDLDLD G R K ++ HNG+KSI +
Sbjct: 65 DTYMNVNGTIIYNITNFYKIYSNE-MLIVHDDLDLDTGIARFKFNHKNSTHNGIKSIYKS 123
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G + LRIGIGRP +I ++L N S E + I + +L K+
Sbjct: 124 FGAKCIFNTLRIGIGRPKLNKNINSYLLNNPSPKEEILIKKTITKCIKCTDVLIKKN 180
>gi|226939243|ref|YP_002794314.1| Pth [Laribacter hongkongensis HLHK9]
gi|254783873|sp|C1DBA8|PTH_LARHH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226714167|gb|ACO73305.1| Pth [Laribacter hongkongensis HLHK9]
Length = 189
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 92/172 (53%), Gaps = 11/172 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEIS-EGQLDGLRTILIK 60
++ GLGNPG EY RHN G D+ H P + KF + G+L +
Sbjct: 6 LIVGLGNPGPEYAATRHNAGAWFTDQAARREHATPRLESKFFGLYARSGELH-----FVW 60
Query: 61 PQTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
PQT+MN SG+S+ V FYK LP E LV+HD+LDL G+ R K GGG GHNGL+ I
Sbjct: 61 PQTYMNASGKSVAAVARFYKILP--EEILVVHDELDLPPGSARFKKGGGHGGHNGLRDIH 118
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G +Y RLR+GIG P D + + VL S E+ + I + +LP
Sbjct: 119 SALGTPDYWRLRLGIGHPGDKSQVAHFVLKPPRSEEQTLIDIAIGHALDTLP 170
>gi|238756929|ref|ZP_04618117.1| Peptidyl-tRNA hydrolase [Yersinia aldovae ATCC 35236]
gi|238704759|gb|EEP97288.1| Peptidyl-tRNA hydrolase [Yersinia aldovae ATCC 35236]
Length = 196
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 103/190 (54%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H ++ KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEEPKFFGYTARLNLAGQDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG++++ + FY+ LP E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 66 STFMNLSGKAVVAMAGFYRILP--EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N+ RLRIGIG P D + + VLG + E+ + ID R +L + +
Sbjct: 124 KLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQALIDDAIDESIRCTEVLLQEDIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|315606043|ref|ZP_07881074.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315312325|gb|EFU60411.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 203
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 93/163 (57%), Gaps = 11/163 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL-------DGL 54
++V GLGNPG +Y RHN+G++ +D + S + ++ +L G
Sbjct: 7 WLVVGLGNPGAQYASTRHNVGYLTLDVLASRGGASLTSHRSRTHTADVRLGVGPGGVPGP 66
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
R +L + ++MN SG + + +F K LP+ LVIHDD+DL TLRLK GGG+ GHN
Sbjct: 67 RVVLARADSYMNTSGGPIAALASFLKILPS--RILVIHDDMDLPAHTLRLKVGGGEGGHN 124
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
GLKS+S G ++Y RLRIG+GRPP +VL + ER
Sbjct: 125 GLKSLSSHLGTRDYARLRIGVGRPPGRMDPADYVLSALPAKER 167
>gi|260767758|ref|ZP_05876693.1| peptidyl-tRNA hydrolase [Vibrio furnissii CIP 102972]
gi|260617267|gb|EEX42451.1| peptidyl-tRNA hydrolase [Vibrio furnissii CIP 102972]
Length = 196
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + KF ++G L+ P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARIHNVVLKNEPKFFGLTGRIMVNGDDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ N E ++ HD+LDL G + K GGG GHNGLK K
Sbjct: 67 TTFMNLSGKAVGALAKFYQI-NPEEIMIAHDELDLPPGVAKFKKGGGHGGHNGLKDTISK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N + RLRIGIG P + +VLG + E+ L ++D R L +L K
Sbjct: 126 LGNNKEFYRLRIGIGHPGHKDKVAGYVLGKAPAKEQECLDAVVDESVRCLDILFK 180
>gi|322513907|ref|ZP_08066984.1| aminoacyl-tRNA hydrolase [Actinobacillus ureae ATCC 25976]
gi|322120242|gb|EFX92195.1| aminoacyl-tRNA hydrolase [Actinobacillus ureae ATCC 25976]
Length = 194
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 97/175 (55%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y + RHN G I+ I F+ + KF ++++ G L+ P
Sbjct: 6 LIVGLANPGAKYEDTRHNAGEWLINEIARQFNVSLKEEAKFFGKVAKINAAGGEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LV HD+LDL G ++K GGG GHNGLK I
Sbjct: 66 TTFMNLSGKAIGALANFYRI-KPEEILVAHDELDLPPGAAKIKQGGGHGGHNGLKDIIAC 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ R+RIGIG P + +VLG S ++ + +D +R + +L K
Sbjct: 125 LGNSNNFYRVRIGIGHPGSKELVAGYVLGKPSPQDQEKINAAVDEASRCVDVLFK 179
>gi|254495953|ref|ZP_05108861.1| peptidyl-tRNA hydrolase [Legionella drancourtii LLAP12]
gi|254354831|gb|EET13458.1| peptidyl-tRNA hydrolase [Legionella drancourtii LLAP12]
Length = 191
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 98/174 (56%), Gaps = 7/174 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIG---FMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG Y RHN G + + HS F +KK AE++E +L+ L+
Sbjct: 7 LIIGLRNPGSAYEHTRHNAGGWLTAALAQRHSTSF--KLEKKMQAELAELKLNNHTGKLV 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMN SGQ + FY++ E LV+HD+LDL G ++LKTGGG GHNGL+ I
Sbjct: 65 LPLTFMNHSGQPTRLISQFYRI-QPEEILVVHDELDLPAGRIKLKTGGGHGGHNGLRDII 123
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ G ++ RLRIGIG P + ++VLG S+ +R + ID +PL+
Sbjct: 124 AQLGSPHFHRLRIGIGHPGHKDLVHQYVLGKPSAHDRQQIYDAIDRGIAVMPLV 177
>gi|238788560|ref|ZP_04632353.1| Peptidyl-tRNA hydrolase [Yersinia frederiksenii ATCC 33641]
gi|238723473|gb|EEQ15120.1| Peptidyl-tRNA hydrolase [Yersinia frederiksenii ATCC 33641]
Length = 196
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 101/190 (53%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEESKFFGYTARLNLAGQDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG+++ + FY+ LP E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 66 STFMNLSGKAVAAMAGFYRILP--EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N+ RLRIGIG P D + + VLG + E+ + ID R +L K +
Sbjct: 124 RLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQTLIDDAIDESIRCTEVLLKEDIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|330502026|ref|YP_004378895.1| peptidyl-tRNA hydrolase [Pseudomonas mendocina NK-01]
gi|328916312|gb|AEB57143.1| peptidyl-tRNA hydrolase [Pseudomonas mendocina NK-01]
Length = 196
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 94/171 (54%), Gaps = 4/171 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++R+ + + +K+ + + G L+ P
Sbjct: 6 LIVGLGNPGPEYDQTRHNAGALFVERVAASQRVNLSVDRKYFGLVGKFNHQGREVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + NF+K+ E LV HD+LD+ G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALANFFKI-KPEEILVAHDELDMPPGVAKLKQGGGHGGHNGLRDIIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G N+ RLR+GIG P + + +VLG E+ L ID LP
Sbjct: 125 LGNQNNFHRLRLGIGHPGHASLVSGYVLGRAPRSEQELLDKSIDFALDVLP 175
>gi|240948404|ref|ZP_04752782.1| peptidyl-tRNA hydrolase [Actinobacillus minor NM305]
gi|240297230|gb|EER47788.1| peptidyl-tRNA hydrolase [Actinobacillus minor NM305]
Length = 194
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y E RHN G ++ + F+ + K+ ++++ L+ P
Sbjct: 6 LIVGLANPGAKYEETRHNAGEWLVNELARMFNATLKDEAKYFGKVAKINTPQGEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LV HD+LDL G ++K GGG GHNGLK I
Sbjct: 66 TTFMNLSGKAVGALANFYRI-KPEEILVAHDELDLPPGVAKIKQGGGHGGHNGLKDIIAA 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ R+RIGIG P + +VLG SS ++ + +D +R + LL K V
Sbjct: 125 LGNSNNFYRVRIGIGHPGHKDLVASYVLGKPSSTDQPLINAAVDEASRCVELLFKEGIVK 184
Query: 180 FLNHI 184
N +
Sbjct: 185 ATNRL 189
>gi|152987749|ref|YP_001350653.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa PA7]
gi|166229437|sp|A6VC68|PTH_PSEA7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|150962907|gb|ABR84932.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa PA7]
Length = 194
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 97/171 (56%), Gaps = 4/171 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++R+ H+ ++K+ + + G L+ P
Sbjct: 6 LIVGLGNPGPEYDQTRHNAGALFVERLAHAQGISLVAERKYFGLVGKFSHQGKDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + F+++P + LV HD+LD+ G +LKTGGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALAGFFRIPP-DAILVAHDELDMPPGVAKLKTGGGHGGHNGLRDIIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G ++ RLR+GIG P ++ + +VLG E+ L ID LP
Sbjct: 125 LGNQNSFHRLRLGIGHPGHSSLVSGYVLGRAPRSEQELLDTSIDFALGVLP 175
>gi|28897512|ref|NP_797117.1| peptidyl-tRNA hydrolase [Vibrio parahaemolyticus RIMD 2210633]
gi|31076864|sp|Q87RN9|PTH_VIBPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|28805724|dbj|BAC59001.1| peptidyl-tRNA hydrolase [Vibrio parahaemolyticus RIMD 2210633]
Length = 196
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + KF ++G L+ P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARVHNVTLKNEPKFFGLTGRIMVNGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E +V HD+LDL G + K GGG GHNGL+ K
Sbjct: 67 TTFMNLSGKAIAALAKFYQI-KPEEIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDTISK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K++ RLRIGIG P + VLG + E+ L D RSL +L K
Sbjct: 126 LGNNKDFYRLRIGIGHPGHKDKVAGFVLGKAPAKEQELLDAAADEAVRSLDILIK 180
>gi|238763007|ref|ZP_04623974.1| Peptidyl-tRNA hydrolase [Yersinia kristensenii ATCC 33638]
gi|238698765|gb|EEP91515.1| Peptidyl-tRNA hydrolase [Yersinia kristensenii ATCC 33638]
Length = 196
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 101/190 (53%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLAQRHNQQLKEESKFFGYTARLNLAGQDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG+++ + FY+ LP E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 66 STFMNLSGKAVAAMAGFYRILP--EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N+ RLRIGIG P D + + VLG + E+ + ID R +L K +
Sbjct: 124 RLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQTLIDDAIDESIRCTEVLLKEDIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|258626132|ref|ZP_05720980.1| Peptidyl-tRNA hydrolase [Vibrio mimicus VM603]
gi|258581487|gb|EEW06388.1| Peptidyl-tRNA hydrolase [Vibrio mimicus VM603]
Length = 196
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + KF ++G ++ P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLINGQELRVLVP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E +V HD+LDL G + K GGG GHNGLK K
Sbjct: 67 TTFMNLSGKAIAALANFYQI-KPEEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTISK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N + RLR+GIG P + +VLG + E+ L +D R L L K
Sbjct: 126 LGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLETLMK 180
>gi|320199243|gb|EFW73834.1| Peptidyl-tRNA hydrolase [Escherichia coli EC4100B]
Length = 189
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 90/167 (53%), Gaps = 4/167 (2%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKPQ 62
++ L NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 1 MSALANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVPT 60
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+++ + +F+++ + + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 61 TFMNLSGKAVAVMASFFRI-SPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKL 119
Query: 123 GK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 120 GNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 166
>gi|238797824|ref|ZP_04641317.1| Peptidyl-tRNA hydrolase [Yersinia mollaretii ATCC 43969]
gi|238718352|gb|EEQ10175.1| Peptidyl-tRNA hydrolase [Yersinia mollaretii ATCC 43969]
Length = 196
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 102/190 (53%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H ++ KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEEAKFFGYTARLNLAGQDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG++++ + FY+ LP E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 66 STFMNLSGKAVVAMAGFYRILP--EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N+ RLRIGIG P D + ++ VLG + E+ + ID R +L
Sbjct: 124 KLGNNPNFYRLRIGIGHPGDKSKVVGFVLGKPPTSEQTLIDDAIDESIRCTEVLMTEGIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|188591107|ref|YP_001795707.1| peptidyl-tRNA hydrolase [Cupriavidus taiwanensis LMG 19424]
gi|238692926|sp|B2AGT6|PTH_CUPTR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|170938001|emb|CAP62985.1| peptidyl-tRNA hydrolase [Cupriavidus taiwanensis LMG 19424]
Length = 198
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 104/197 (52%), Gaps = 13/197 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ + +FH + +L L+KP
Sbjct: 4 LIVGLGNPGAEYEATRHNAGFWLVDQLARMGGATLRVEGRFHGLAARARLWDQEVWLLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMN SG +++ + FYK LP+ +V+HD++DL G+ +LK GGG GHNGLK IS
Sbjct: 64 STFMNRSGLAVVSLARFYKILPD--EIVVVHDEMDLPAGSAKLKRGGGAGGHNGLKDISA 121
Query: 121 KCG-KNYKRLRIGIGRP---PDTAHIIRHVLGNF-----SSPERYFLLPIIDNIARSLPL 171
G ++Y RLR+G+G P P A R + NF E+ + +D L L
Sbjct: 122 HLGTQDYWRLRLGVGHPRNAPGGAGAGREDVVNFVLKPPRREEQEAIDAALDRCIEPLGL 181
Query: 172 LAKREDVSFLNHIVSVR 188
LA+ + + + + R
Sbjct: 182 LARGDAERAMAQLHTAR 198
>gi|306837765|ref|ZP_07470631.1| peptidyl-tRNA hydrolase [Brucella sp. NF 2653]
gi|306407150|gb|EFM63363.1| peptidyl-tRNA hydrolase [Brucella sp. NF 2653]
Length = 186
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 84/126 (66%), Gaps = 6/126 (4%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-----S 119
MNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+KSI S
Sbjct: 1 MNLSGQSIGEAMRFYKL-TPADLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDAHMQS 59
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+RED S
Sbjct: 60 FPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLLSAVADNVAMLARREDNS 119
Query: 180 FLNHIV 185
F+N I
Sbjct: 120 FMNRIA 125
>gi|160902896|ref|YP_001568477.1| aminoacyl-tRNA hydrolase [Petrotoga mobilis SJ95]
gi|160360540|gb|ABX32154.1| Aminoacyl-tRNA hydrolase [Petrotoga mobilis SJ95]
Length = 191
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 92/174 (52%), Gaps = 7/174 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+V GLGNPG Y +HN+GF+ +D+ + KK + EG I IKP
Sbjct: 4 LVIGLGNPGPRYVFTKHNVGFLALDKYEENKKNISNIKKISGKNFEG-FSIENDIFIKPL 62
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVI-HDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+ L V F K +E LVI +DD+ L+ G +R++ G D GHNGLKSI
Sbjct: 63 TYMNASGEVLPYV--FKKFGKIEESLVIIYDDIWLNLGEIRIRKNGSDGGHNGLKSIIAI 120
Query: 122 C-GKNYKRLRIGI--GRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
++ R+RIGI G + ++ +VL F+ E L +D + ++ L+
Sbjct: 121 LKSTDFPRIRIGINNGYEHGSGNLANYVLTPFTQEEWIILDKALDYVTITIDLI 174
>gi|152993637|ref|YP_001359358.1| peptidyl-tRNA hydrolase [Sulfurovum sp. NBC37-1]
gi|166229462|sp|A6QBZ2|PTH_SULNB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|151425498|dbj|BAF73001.1| peptidyl-tRNA hydrolase, PTH1 family [Sulfurovum sp. NBC37-1]
Length = 189
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 91/152 (59%), Gaps = 6/152 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M + GLGNPG +Y + RHNIGF ID + K F E+ T+ +
Sbjct: 1 MTLFVGLGNPGSKYEDTRHNIGFKVIDSLVDDLGARNISKNAFQGELYRIA----NTLFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG+S+ V F+K+ LE+ +VIHDD+DL FG +R K GGG GHNGL+S+
Sbjct: 57 KPTTFMNLSGKSIETVKQFFKI-ELEDIIVIHDDIDLPFGAVRFKRGGGHGGHNGLRSLD 115
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFS 151
GK Y R+RIG+G+P + + +VL FS
Sbjct: 116 AHIGKEYIRVRIGVGKPEHKSQVADYVLHRFS 147
>gi|330887872|gb|EGH20533.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. mori str. 301020]
Length = 194
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 93/173 (53%), Gaps = 8/173 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY + RHN G ++RI + + P ++KF G L+
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVP--ERKFFGLTGRFTHQGQDVRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I
Sbjct: 64 IPTTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDII 122
Query: 120 EKC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ + RLR+GIG P D + + VLG E+ L ID LP
Sbjct: 123 AQLRNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|167031779|ref|YP_001667010.1| peptidyl-tRNA hydrolase [Pseudomonas putida GB-1]
gi|189038159|sp|B0KND4|PTH_PSEPG RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166858267|gb|ABY96674.1| Aminoacyl-tRNA hydrolase [Pseudomonas putida GB-1]
Length = 194
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++RI S KK+ ++ G L+ P
Sbjct: 6 LIVGLGNPGPEYEQTRHNAGALFVERIASAQRVSLTADKKYFGLTAKFSHQGNDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + NF+++ E LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALANFFRI-KPEAILVAHDELDLPPGVAKLKRGGGHGGHNGLRDIIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G ++ RLR+GIG P D + VLG E+ L ID LP
Sbjct: 125 LGNQNDFHRLRLGIGHPGDAKLVSNFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|24215049|ref|NP_712530.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str.
56601]
gi|45657470|ref|YP_001556.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|46576821|sp|Q8F3Q2|PTH_LEPIN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|59798053|sp|Q72RZ0|PTH_LEPIC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|24196101|gb|AAN49548.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str.
56601]
gi|45600709|gb|AAS70193.1| peptidyl tRNA hydrolase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
Length = 190
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 94/155 (60%), Gaps = 3/155 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ G+GNPG +Y NRHNIGF I +++ ++ DG+ +KP
Sbjct: 6 LLLVGIGNPGQKYVHNRHNIGF-VILDSLLDSSSVSYQTNSKYSLARTDEDGVTIFYLKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMNLSG+S+ E+ + + EN L+IHD++D +FG L+LK GGG AGHNGL++I EK
Sbjct: 65 LEFMNLSGKSVAEIAKKNGI-SPENILIIHDEIDFEFGKLKLKGGGGHAGHNGLRNIVEK 123
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G N + RLR G+G+P T+ + +VL NF E+
Sbjct: 124 LGTNTFFRLRFGVGKPSITSEVPDYVLSNFLPNEK 158
>gi|146421069|ref|XP_001486486.1| hypothetical protein PGUG_02157 [Meyerozyma guilliermondii ATCC
6260]
gi|146389901|gb|EDK38059.1| hypothetical protein PGUG_02157 [Meyerozyma guilliermondii ATCC
6260]
Length = 209
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 87/172 (50%), Gaps = 10/172 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF---FPAWK--KKFHAEISEGQLDGLRT 56
+V +GNP +Y + RHN+G I+ +H + + W K F EIS DG
Sbjct: 27 VLVVSIGNPEPQYKDTRHNVGHWIINELHRNNVPIEYGPWADDKTFGGEISTSS-DGNVV 85
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA-GHNGL 115
+ ++MN G+ + ++ Y + LV+HD+L D G L+L+ G A GHNGL
Sbjct: 86 LARSIGSYMNTQGKPVSKITQRYGKD--KTLLVVHDELQKDLGKLQLRGPGTSARGHNGL 143
Query: 116 KSISEKCGKNYKRLRIGIGRP-PDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
KSI G Y +L +GIGRP + +VL F++ ER L +++ +
Sbjct: 144 KSIDSAMGNKYTKLSVGIGRPNKGQKEVSDYVLSKFTTSERAELEKVLEKAS 195
>gi|52842859|ref|YP_096658.1| peptidyl-tRNA hydrolase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|68052907|sp|Q5ZS66|PTH_LEGPH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|52629970|gb|AAU28711.1| peptidyl tRNA hydrolase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
Length = 189
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 101/186 (54%), Gaps = 7/186 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG Y + RHN G + + H+ HF KK AE++E ++ L+
Sbjct: 5 LIVGLRNPGSAYEQTRHNAGAWLVTALAQRHNSHF--KIDKKMQAELTEIDINNHPCRLV 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMN SGQ+ + FYK+ E L++HD+LDL G ++LKTGGG GHNGL+ I+
Sbjct: 63 LPLTFMNHSGQTTRIISQFYKIEPGE-ILIVHDELDLPVGRIKLKTGGGHGGHNGLRDIT 121
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G + RLRIGIG P + ++VL S +R + ID +P++ +
Sbjct: 122 AQLGTGEFHRLRIGIGHPGHKDLVHQYVLSRPSMHDRQQIYDAIDRGIAIIPIVLSGDMA 181
Query: 179 SFLNHI 184
+N +
Sbjct: 182 RAMNQV 187
>gi|307611528|emb|CBX01205.1| hypothetical protein LPW_29041 [Legionella pneumophila 130b]
Length = 189
Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 101/186 (54%), Gaps = 7/186 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG Y + RHN G + + H+ HF KK AE++E ++ L+
Sbjct: 5 LIVGLRNPGSAYEQTRHNAGAWLVTALAQRHNSHF--KIDKKMQAELTEIDINNHPCRLV 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMN SGQ+ + FYK+ E L++HD+LDL G ++LKTGGG GHNGL+ I+
Sbjct: 63 LPLTFMNHSGQTTRIISQFYKIEPGE-ILIVHDELDLPVGRIKLKTGGGHGGHNGLRDIT 121
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G + RLRIGIG P + ++VL S +R + ID +P++ +
Sbjct: 122 AQLGTGEFHRLRIGIGHPGHKDLVHQYVLSRPSMHDRQQIYDAIDRGIAIIPIVLSGDIA 181
Query: 179 SFLNHI 184
+N +
Sbjct: 182 RAMNQV 187
>gi|311279346|ref|YP_003941577.1| peptidyl-tRNA hydrolase [Enterobacter cloacae SCF1]
gi|308748541|gb|ADO48293.1| peptidyl-tRNA hydrolase [Enterobacter cloacae SCF1]
Length = 194
Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S + G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERFRAPLREESKFFGYTSRINVAGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + F+++ + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMATFFRIAP-DEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLR+GIG P D ++ VLG E+ + +D R + K
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPLSEQKLIDEAVDEATRCTEIWLK 178
>gi|323465803|gb|ADX69490.1| Peptidyl-tRNA hydrolase [Lactobacillus helveticus H10]
Length = 162
Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 82/144 (56%), Gaps = 3/144 (2%)
Query: 39 KKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDF 98
K KF ++ Q++G IL++P+T+MN SG+S+ ++ NF+K+ E+ L+I DD+D+
Sbjct: 16 KDKFEGHWTKQQINGEDVILLEPKTYMNESGRSVSQIANFFKVAP-EDVLIIQDDMDMPI 74
Query: 99 GTLRLKTGGGDAGHNGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYF 157
G +R++ G GHNG+KSI G + + RL+IGI P +T ++ VL F+ ++
Sbjct: 75 GKIRIRANGKSGGHNGIKSIIRDLGTEKFNRLKIGIRHPKNTT-VVSWVLTPFNDEQQKL 133
Query: 158 LLPIIDNIARSLPLLAKREDVSFL 181
+ D + + D +L
Sbjct: 134 MDDAFDTSVKIIDDFIAGRDSQYL 157
>gi|289805455|ref|ZP_06536084.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 162
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 4/149 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L+G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLG 148
G N+ RLR+GIG P D ++ VLG
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKNKVVGFVLG 152
>gi|12044935|ref|NP_072745.1| peptidyl-tRNA hydrolase [Mycoplasma genitalium G37]
gi|255660106|ref|ZP_05405515.1| peptidyl-tRNA hydrolase [Mycoplasma genitalium G37]
gi|1346896|sp|P47329|PTH_MYCGE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|3844670|gb|AAC71301.1| peptidyl-tRNA hydrolase [Mycoplasma genitalium G37]
gi|166078836|gb|ABY79454.1| peptidyl-tRNA hydrolase [synthetic Mycoplasma genitalium JCVI-1.0]
Length = 189
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 96/177 (54%), Gaps = 15/177 (8%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FH--FFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGN G +Y + RHN GFM +DR+ S FH F K + I E IL
Sbjct: 6 LIVGLGNLGKKYEKTRHNAGFMVLDRLASLFHLNFDKTNKLGDYLFIKEKA-----AILA 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG + + + +++P L N +++HD++ D G +RLK G HNG+KS+
Sbjct: 61 KPATFMNNSGLFVKWLQDHFQIP-LANIMIVHDEIAFDLGVIRLKMQGSANNHNGIKSVI 119
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHII-RHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ + RLR GI + +T++I+ V+ F + E L + I +S+ LL +
Sbjct: 120 RHLDTEQFNRLRFGI-KSQNTSNILHEQVMSEFQNSE---LTKLEVAITKSVELLKR 172
>gi|167856607|ref|ZP_02479308.1| peptidyl-tRNA hydrolase [Haemophilus parasuis 29755]
gi|167852273|gb|EDS23586.1| peptidyl-tRNA hydrolase [Haemophilus parasuis 29755]
Length = 194
Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y E RHN G ++ + F+ + K+ ++++ L+ P
Sbjct: 6 LIVGLANPGAKYEETRHNAGEWLVNELARMFNVTLKEEAKYFGKVAKINTPQGEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LV HD+LDL G ++K GGG GHNGLK I
Sbjct: 66 TTFMNLSGKAVGSLANFYRI-KPEEILVAHDELDLPPGVAKIKQGGGHGGHNGLKDIIAA 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ R+RIGIG P + +VLG S ++ + +D +R + LL K V
Sbjct: 125 LGNSNNFYRVRIGIGHPGHKDLVASYVLGKPSPSDQPLINVAVDEASRCVELLFKEGIVK 184
Query: 180 FLNHI 184
N +
Sbjct: 185 ATNRL 189
>gi|165975491|ref|YP_001651084.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|190149302|ref|YP_001967827.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|303251856|ref|ZP_07338027.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307247009|ref|ZP_07529063.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|307249232|ref|ZP_07531229.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|307256054|ref|ZP_07537842.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 10
str. D13039]
gi|307262615|ref|ZP_07544245.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 13
str. N273]
gi|238687506|sp|B0BRJ2|PTH_ACTPJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238692367|sp|B3GZM3|PTH_ACTP7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|165875592|gb|ABY68640.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|189914433|gb|ACE60685.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|302649286|gb|EFL79471.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|306856461|gb|EFM88610.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|306858756|gb|EFM90815.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|306865476|gb|EFM97371.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 10
str. D13039]
gi|306872038|gb|EFN03752.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 13
str. N273]
Length = 194
Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 95/175 (54%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL N G +Y + RHN G I+ I F+ + KF ++++ G L+ P
Sbjct: 6 LIVGLANSGTKYEDTRHNAGEWLINEIARQFNVSLKEEAKFFGKVAKINAAGGEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LV HD+LDL G ++K GGG GHNGLK I
Sbjct: 66 TTFMNLSGKAVGALANFYRI-KPEEILVAHDELDLPPGVAKIKQGGGHGGHNGLKDIIAS 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ R+RIGIG P + +VLG S ++ + +D R + LL K
Sbjct: 125 LGNSNNFYRVRIGIGHPGSKELVAGYVLGKPSPQDQEKINAAVDEAGRCVDLLLK 179
>gi|315634932|ref|ZP_07890214.1| aminoacyl-tRNA hydrolase [Aggregatibacter segnis ATCC 33393]
gi|315476484|gb|EFU67234.1| aminoacyl-tRNA hydrolase [Aggregatibacter segnis ATCC 33393]
Length = 194
Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I R+ F+ + KF ++ + ++G + P
Sbjct: 6 LIVGLGNPGDKYEDTRHNAGEWLIARLARRFNVTLNAENKFFGKVGKTLMNGKEIRFLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LV+HD+LDL G+++LK GGG GHNGLK I
Sbjct: 66 TTFMNLSGKAVGALANFYRI-KPEEILVLHDELDLPPGSVKLKLGGGHGGHNGLKDIVAA 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S ER L +D A + LL K V
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPSEREALENALDEAANCVELLFKDGIVK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|302205840|gb|ADL10182.1| Peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis C231]
Length = 135
Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
Query: 47 SEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTG 106
+E ++ + IL P+ FMNLSG + + NF+ +P +V+ DDL+L+F ++ K G
Sbjct: 3 AETRIGNTKVILATPRCFMNLSGGPVRSIANFFNIPP-SRVIVLFDDLELNFSEVKAKIG 61
Query: 107 GGDAGHNGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
GGD GHNGL+S+++ G K+Y R+ IGIGRPP VL FS E
Sbjct: 62 GGDHGHNGLRSVTQSLGTKDYFRVGIGIGRPPGRMEPKTFVLKPFSKKE 110
>gi|323492382|ref|ZP_08097535.1| peptidyl-tRNA hydrolase [Vibrio brasiliensis LMG 20546]
gi|323313429|gb|EGA66540.1| peptidyl-tRNA hydrolase [Vibrio brasiliensis LMG 20546]
Length = 196
Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G ++ + H + KF ++G L+ P
Sbjct: 7 LLVGLANPGPEYARTRHNAGAWVVEELARIHNVTLKNEAKFFGLSGRIMVNGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + FY++ E +V HD+LDL G + K GGG GHNGL+ K
Sbjct: 67 TTFMNLSGKSIAALAKFYQI-KPEEIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDTISK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K++ RLRIGIG P + +VLG + E+ L D R L +L K
Sbjct: 126 LGNCKDFYRLRIGIGHPGHKDKVAGYVLGKAPAKEQELLDAAADESVRCLDILIK 180
>gi|126665170|ref|ZP_01736153.1| peptidyl-tRNA hydrolase [Marinobacter sp. ELB17]
gi|126630540|gb|EBA01155.1| peptidyl-tRNA hydrolase [Marinobacter sp. ELB17]
Length = 196
Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLR 55
+ +V GLGNPG +Y RHN G + ++ + S +KK+H + Q GL
Sbjct: 5 IVMVVGLGNPGADYENTRHNAGALFVEALARDAGQSLRL----EKKYHGLYARIQWQGLE 60
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
L+ P TFMN SG + + +F+K+ + E L+ HD+LDL GT +LK GGG GHNGL
Sbjct: 61 LHLLNPLTFMNRSGLPVKALADFFKI-SPEQILIAHDELDLPPGTAKLKKGGGHGGHNGL 119
Query: 116 K-SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ SI+ N++RLR+GIG P + + +VLG E L + D R LP
Sbjct: 120 RDSIAHLGTNNFQRLRLGIGHPGEARQVTGYVLGRLGKQEAEALTAVFDETMRVLP 175
>gi|170723624|ref|YP_001751312.1| peptidyl-tRNA hydrolase [Pseudomonas putida W619]
gi|229485510|sp|B1JEQ3|PTH_PSEPW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169761627|gb|ACA74943.1| Aminoacyl-tRNA hydrolase [Pseudomonas putida W619]
Length = 194
Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++RI S +K+ ++ G L+ P
Sbjct: 6 LIVGLGNPGPEYEQTRHNAGALFVERIASAQRVSLTADRKYFGLTAKFSHQGNDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + NF+++ E LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALANFFRI-KPEAILVAHDELDLPPGVAKLKRGGGHGGHNGLRDIIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G ++ RLR+GIG P D + VLG E+ L ID LP
Sbjct: 125 LGNQNDFHRLRLGIGHPGDAKLVSNFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|90022898|ref|YP_528725.1| peptidyl-tRNA hydrolase [Saccharophagus degradans 2-40]
gi|119391000|sp|Q21FL6|PTH_SACD2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|89952498|gb|ABD82513.1| peptidyl-tRNA hydrolase [Saccharophagus degradans 2-40]
Length = 197
Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 87/155 (56%), Gaps = 4/155 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG+EY RHN G ++ + P + KF S ++G L+ P
Sbjct: 10 LIVGLGNPGNEYEHTRHNAGQDFVEELARDLGQPLSPTPKFFGHFSRLNINGKDVRLLVP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ V FYK+P E LV+HD+LDL G RLK GGG GHNGL+ I
Sbjct: 70 TTYMNRSGQAVAAVCQFYKIPP-EAVLVVHDELDLPPGKARLKIGGGHGGHNGLRDIISS 128
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G K++ RLR+GIG P + + +VL S E
Sbjct: 129 LGNNKDFGRLRLGIGHPGNAKLVSNYVLKKAPSEE 163
>gi|261821683|ref|YP_003259789.1| peptidyl-tRNA hydrolase [Pectobacterium wasabiae WPP163]
gi|261605696|gb|ACX88182.1| peptidyl-tRNA hydrolase [Pectobacterium wasabiae WPP163]
Length = 195
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 97/185 (52%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + S+ + KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAATRHNAGAWFVDCLAESYRQSLKEENKFFGYTARLNLAGQDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ + LV HD+LDL G +LK GGG GHNGLK I K
Sbjct: 66 TTFMNLSGKAVAAMATFYRI-QPDEILVAHDELDLLPGIAKLKLGGGHGGHNGLKDIISK 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P D + + VLG E+ + ID R +L K + +
Sbjct: 125 LGNNPNFHRLRIGIGHPGDKSKVTGFVLGKPPMSEQTLIDGAIDEAVRCTEILMKEDMIK 184
Query: 180 FLNHI 184
+N +
Sbjct: 185 AMNRL 189
>gi|325277192|ref|ZP_08142835.1| peptidyl-tRNA hydrolase [Pseudomonas sp. TJI-51]
gi|324097678|gb|EGB95881.1| peptidyl-tRNA hydrolase [Pseudomonas sp. TJI-51]
Length = 194
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++RI S KK+ ++ G L+ P
Sbjct: 6 LIVGLGNPGPEYEQTRHNAGALFVERIASAQRVSLTADKKYFGLTAKFSHQGNDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + NF+++ E LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALANFFRI-KPEAILVAHDELDLPPGVAKLKRGGGHGGHNGLRDIIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G ++ RLR+GIG P D + VLG E+ L ID LP
Sbjct: 125 LGNQNDFHRLRLGIGHPGDAKLVSNFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|26987456|ref|NP_742881.1| peptidyl-tRNA hydrolase [Pseudomonas putida KT2440]
gi|148546000|ref|YP_001266102.1| peptidyl-tRNA hydrolase [Pseudomonas putida F1]
gi|37999417|sp|Q88PX8|PTH_PSEPK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229439|sp|A5VYF8|PTH_PSEP1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|24982119|gb|AAN66345.1|AE016263_2 peptidyl-tRNA hydrolase [Pseudomonas putida KT2440]
gi|148510058|gb|ABQ76918.1| peptidyl-tRNA hydrolase [Pseudomonas putida F1]
gi|313497086|gb|ADR58452.1| Pth [Pseudomonas putida BIRD-1]
Length = 194
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++R+ S KK+ ++ G L+ P
Sbjct: 6 LIVGLGNPGPEYEQTRHNAGALFVERLASAQRVSLTADKKYFGLTAKFSHQGNDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + NF+++ E LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALANFFRI-KPEAILVAHDELDLPPGVAKLKRGGGHGGHNGLRDIIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G ++ RLR+GIG P D + VLG E+ L ID LP
Sbjct: 125 LGNQNDFHRLRLGIGHPGDAKLVSNFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|189024650|ref|YP_001935418.1| Peptidyl-tRNA hydrolase [Brucella abortus S19]
gi|189020222|gb|ACD72944.1| Peptidyl-tRNA hydrolase [Brucella abortus S19]
Length = 186
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 84/126 (66%), Gaps = 6/126 (4%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI-----S 119
MNLSGQS+ E M FYK+ + +VI+D+LDL G LR+KTGGG GHNG+KSI S
Sbjct: 1 MNLSGQSIGEAMRFYKM-TPADLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDAHMQS 59
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+RED S
Sbjct: 60 FPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLMGAVADNVAMLARREDNS 119
Query: 180 FLNHIV 185
F+N I
Sbjct: 120 FMNRIA 125
>gi|54295491|ref|YP_127906.1| peptidyl-tRNA hydrolase [Legionella pneumophila str. Lens]
gi|68052899|sp|Q5WTE7|PTH_LEGPL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|53755323|emb|CAH16819.1| hypothetical protein lpl2578 [Legionella pneumophila str. Lens]
Length = 189
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 101/186 (54%), Gaps = 7/186 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG Y + RHN G + + H+ HF KK AE++E ++ L+
Sbjct: 5 LIVGLRNPGSAYEQTRHNAGAWLVTALAQRHNSHF--KIDKKMQAELTEIDINNHPCRLL 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMN SGQ+ + FYK+ E L++HD+LDL G ++LKTGGG GHNGL+ I+
Sbjct: 63 LPLTFMNHSGQTTRIISQFYKIEPGE-ILIVHDELDLPVGRIKLKTGGGHGGHNGLRDIT 121
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G + RLRIGIG P + ++VL S +R + ID +P++ +
Sbjct: 122 AQLGTGEFHRLRIGIGHPGHKDLVHQYVLSRPSMHDRQQIYDAIDRGIAIIPIVLSGDIA 181
Query: 179 SFLNHI 184
+N +
Sbjct: 182 RAMNQV 187
>gi|223041598|ref|ZP_03611797.1| peptidyl-tRNA hydrolase [Actinobacillus minor 202]
gi|223017573|gb|EEF15985.1| peptidyl-tRNA hydrolase [Actinobacillus minor 202]
Length = 194
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y E RHN G ++ + F+ + K+ ++++ L+ P
Sbjct: 6 LIVGLANPGAKYEETRHNAGEWLVNELARMFNATLKDEAKYFGKVAKINTPQGEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LV HD+LDL G ++K GGG GHNGLK I
Sbjct: 66 TTFMNLSGKAVGALANFYRI-KPEEILVAHDELDLPPGVAKIKQGGGHGGHNGLKDIIAA 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ R+RIGIG P + +VLG S ++ + +D +R + LL K V
Sbjct: 125 LGNSNNFYRVRIGIGHPGHKDLVASYVLGKPSPTDQPLINAAVDEASRCVELLFKEGIVK 184
Query: 180 FLNHI 184
N +
Sbjct: 185 ATNRL 189
>gi|262394977|ref|YP_003286831.1| peptidyl-tRNA hydrolase [Vibrio sp. Ex25]
gi|269965460|ref|ZP_06179579.1| Peptidyl-tRNA hydrolase [Vibrio alginolyticus 40B]
gi|262338571|gb|ACY52366.1| peptidyl-tRNA hydrolase [Vibrio sp. Ex25]
gi|269829939|gb|EEZ84169.1| Peptidyl-tRNA hydrolase [Vibrio alginolyticus 40B]
Length = 196
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 89/175 (50%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G ++ + H + KF ++G L+ P
Sbjct: 7 LLVGLANPGPEYARTRHNAGAWVVEELARVHNVTLKNEPKFFGLTGRIMVNGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + FY++ E +V HD+LDL G + K GGG GHNGL+ K
Sbjct: 67 TTFMNLSGKSIAALAKFYQI-KPEEIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDTISK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K++ RLRIGIG P + VLG + E+ L D R L +L K
Sbjct: 126 LGNNKDFYRLRIGIGHPGHKDKVAGFVLGKAPAKEQELLDAAADEAVRCLDILIK 180
>gi|323496824|ref|ZP_08101861.1| peptidyl-tRNA hydrolase [Vibrio sinaloensis DSM 21326]
gi|323318083|gb|EGA71057.1| peptidyl-tRNA hydrolase [Vibrio sinaloensis DSM 21326]
Length = 196
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 89/175 (50%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G ++ + H + KF ++G L+ P
Sbjct: 7 LLVGLANPGPEYARTRHNAGAWVVEELARVHNITLKNEAKFFGLTGRIMMNGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + FY++ E +V HD+LDL G + K GGG GHNGL+ K
Sbjct: 67 TTFMNLSGKSIAALAKFYQI-KPEEIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDTISK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K++ RLRIGIG P + VLG + E+ L D R L +L K
Sbjct: 126 LGNCKDFYRLRIGIGHPGHKDKVAGFVLGKAPAKEQELLDAAADESVRCLDILIK 180
>gi|15642183|ref|NP_231815.1| peptidyl-tRNA hydrolase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121730803|ref|ZP_01682882.1| peptidyl-tRNA hydrolase [Vibrio cholerae V52]
gi|147675550|ref|YP_001217700.1| peptidyl-tRNA hydrolase [Vibrio cholerae O395]
gi|227082309|ref|YP_002810860.1| peptidyl-tRNA hydrolase [Vibrio cholerae M66-2]
gi|229507738|ref|ZP_04397243.1| peptidyl-tRNA hydrolase [Vibrio cholerae BX 330286]
gi|229512026|ref|ZP_04401505.1| peptidyl-tRNA hydrolase [Vibrio cholerae B33]
gi|229519162|ref|ZP_04408605.1| peptidyl-tRNA hydrolase [Vibrio cholerae RC9]
gi|229607283|ref|YP_002877931.1| peptidyl-tRNA hydrolase [Vibrio cholerae MJ-1236]
gi|254849263|ref|ZP_05238613.1| peptidyl-tRNA hydrolase [Vibrio cholerae MO10]
gi|255745087|ref|ZP_05419036.1| peptidyl-tRNA hydrolase [Vibrio cholera CIRS 101]
gi|262166826|ref|ZP_06034560.1| peptidyl-tRNA hydrolase [Vibrio cholerae RC27]
gi|298497801|ref|ZP_07007608.1| peptidyl-tRNA hydrolase [Vibrio cholerae MAK 757]
gi|14195083|sp|Q9KQ21|PTH_VIBCH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|172047626|sp|A5F686|PTH_VIBC3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783896|sp|C3LPI9|PTH_VIBCM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|9656739|gb|AAF95329.1| peptidyl-tRNA hydrolase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121627624|gb|EAX60305.1| peptidyl-tRNA hydrolase [Vibrio cholerae V52]
gi|146317433|gb|ABQ21972.1| peptidyl-tRNA hydrolase [Vibrio cholerae O395]
gi|227010197|gb|ACP06409.1| peptidyl-tRNA hydrolase [Vibrio cholerae M66-2]
gi|227014080|gb|ACP10290.1| peptidyl-tRNA hydrolase [Vibrio cholerae O395]
gi|229343851|gb|EEO08826.1| peptidyl-tRNA hydrolase [Vibrio cholerae RC9]
gi|229351991|gb|EEO16932.1| peptidyl-tRNA hydrolase [Vibrio cholerae B33]
gi|229355243|gb|EEO20164.1| peptidyl-tRNA hydrolase [Vibrio cholerae BX 330286]
gi|229369938|gb|ACQ60361.1| peptidyl-tRNA hydrolase [Vibrio cholerae MJ-1236]
gi|254844968|gb|EET23382.1| peptidyl-tRNA hydrolase [Vibrio cholerae MO10]
gi|255736917|gb|EET92313.1| peptidyl-tRNA hydrolase [Vibrio cholera CIRS 101]
gi|262024741|gb|EEY43412.1| peptidyl-tRNA hydrolase [Vibrio cholerae RC27]
gi|297542134|gb|EFH78184.1| peptidyl-tRNA hydrolase [Vibrio cholerae MAK 757]
Length = 196
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + KF ++ ++ P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLINSQELRVLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E +V HD+LDL G + K GGG GHNGLK K
Sbjct: 67 TTFMNLSGKAIAALANFYQI-KPEEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTISK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N + RLR+GIG P + +VLG + E+ L +D R L +L K
Sbjct: 126 LGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEILMK 180
>gi|260779390|ref|ZP_05888282.1| peptidyl-tRNA hydrolase [Vibrio coralliilyticus ATCC BAA-450]
gi|260605554|gb|EEX31849.1| peptidyl-tRNA hydrolase [Vibrio coralliilyticus ATCC BAA-450]
Length = 228
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 89/175 (50%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G ++ + H + KF ++G L+ P
Sbjct: 39 LLVGLANPGPEYARTRHNAGAWVVEELARVHNITLKNEAKFFGLTGRIMMNGQDLRLLIP 98
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + FY++ E +V HD+LDL G + K GGG GHNGL+ K
Sbjct: 99 TTFMNLSGKSIAALAKFYQI-KPEEIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDTISK 157
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K++ RLRIGIG P + VLG + E+ L D R L +L K
Sbjct: 158 LGNCKDFYRLRIGIGHPGHKDKVAGFVLGKAPAKEQELLDAAADESVRCLDILIK 212
>gi|212636641|ref|YP_002313166.1| peptidyl-tRNA hydrolase [Shewanella piezotolerans WP3]
gi|212558125|gb|ACJ30579.1| Peptidyl-tRNA hydrolase [Shewanella piezotolerans WP3]
Length = 219
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y RHN G ++ + K+ + L G L+ P
Sbjct: 31 LIVGLANPGAQYERTRHNAGAWYVEELARVCGASLTLDSKYFGMTARATLHGKDVRLLIP 90
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I K
Sbjct: 91 TTFMNLSGKSVGALANFFRIAP-EEILVAHDELDMSPGVAKFKLGGGHGGHNGLKDIIAK 149
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
K + RLRIGIG P D + +VL S ++ + ID RS +L
Sbjct: 150 LANDKGFYRLRIGIGHPGDKNQVSNYVLSKASPTDQELMDAAIDEAVRSTEIL 202
>gi|104780083|ref|YP_606581.1| peptidyl-tRNA hydrolase [Pseudomonas entomophila L48]
gi|123255952|sp|Q1IEY8|PTH_PSEE4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|95109070|emb|CAK13766.1| peptidyl-tRNA hydrolase [Pseudomonas entomophila L48]
Length = 194
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++R+ S KK+ ++ G L+ P
Sbjct: 6 LIVGLGNPGPEYEQTRHNAGALFVERLASAQRVSLTADKKYFGLTAKFSHQGNDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + NF+++ E LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALANFFRI-KPEAILVAHDELDLPPGVAKLKRGGGHGGHNGLRDIIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G ++ RLR+GIG P D + VLG E+ L ID
Sbjct: 125 LGNQNDFHRLRLGIGHPGDAKLVSNFVLGRAPRAEQEKLDASID 168
>gi|260906160|ref|ZP_05914482.1| peptidyl-tRNA hydrolase [Brevibacterium linens BL2]
Length = 199
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 96/179 (53%), Gaps = 10/179 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--------DG 53
++V GLGNPG +Y RHNIG M I + + K + + +L G
Sbjct: 6 WLVFGLGNPGPKYETTRHNIGQMVIAELAHRIGVNLTRTKLRSNVGTSRLPTGSIPGVPG 65
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
R +L +MN SG + ++ +FY + + + + +HDD+D+ + T++ K GGG+ GHN
Sbjct: 66 PRVVLATSTGYMNESGGPVRQLADFYSI-DTDRIIAVHDDVDIPYDTIKAKVGGGEGGHN 124
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
GL+S++ G KNY R+R G+GRP +VL FS ER L I +IA ++ +
Sbjct: 125 GLRSMTSALGTKNYPRIRAGVGRPLGRQDTADYVLKPFSKDERATLPIFISDIADAVEM 183
>gi|315127048|ref|YP_004069051.1| peptidyl-tRNA hydrolase [Pseudoalteromonas sp. SM9913]
gi|315015562|gb|ADT68900.1| peptidyl-tRNA hydrolase [Pseudoalteromonas sp. SM9913]
Length = 194
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 98/175 (56%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G I + + ++ K+H + + G L+ P
Sbjct: 6 MLVGLANPGPEYANTRHNAGAWFIQELAARYNCTLKHDPKYHGLTGKVIIQGKEFKLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + NF+K+P +E+ LV HD+LDLD G +LK GGG GHNGLK I K
Sbjct: 66 TTYMNLSGKAVSSLANFFKIP-VEDILVAHDELDLDPGVAKLKKGGGHGGHNGLKDIIAK 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
K++ RLRIG+G P + VLG + ++ + +D R + +LAK
Sbjct: 125 MANQKDFMRLRIGVGHPGHREMVTGWVLGKAAKDDQEKMDAAVDEAVRCMEILAK 179
>gi|229513830|ref|ZP_04403292.1| peptidyl-tRNA hydrolase [Vibrio cholerae TMA 21]
gi|229522135|ref|ZP_04411552.1| peptidyl-tRNA hydrolase [Vibrio cholerae TM 11079-80]
gi|229524180|ref|ZP_04413585.1| peptidyl-tRNA hydrolase [Vibrio cholerae bv. albensis VL426]
gi|229337761|gb|EEO02778.1| peptidyl-tRNA hydrolase [Vibrio cholerae bv. albensis VL426]
gi|229341060|gb|EEO06065.1| peptidyl-tRNA hydrolase [Vibrio cholerae TM 11079-80]
gi|229349011|gb|EEO13968.1| peptidyl-tRNA hydrolase [Vibrio cholerae TMA 21]
gi|327484706|gb|AEA79113.1| Peptidyl-tRNA hydrolase [Vibrio cholerae LMA3894-4]
Length = 196
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + KF ++ ++ P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLINSQELRVLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E +V HD+LDL G + K GGG GHNGLK K
Sbjct: 67 TTFMNLSGKAIAALANFYQI-KPEEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTISK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N + RLR+GIG P + +VLG + E+ L +D R L +L K
Sbjct: 126 LGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEILLK 180
>gi|297685405|ref|XP_002820280.1| PREDICTED: LOW QUALITY PROTEIN: probable peptidyl-tRNA
hydrolase-like [Pongo abelii]
Length = 235
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 92/194 (47%), Gaps = 25/194 (12%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFH--AEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W + H A+++ L + +L
Sbjct: 45 WMVAGLGNPG--LPGTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 102
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA-------G 111
++P+ MN +G+S+ + L E YLV HD+LD G L GG + G
Sbjct: 103 LRPRRLMNANGRSVARAAELFGLTAEEVYLV-HDELDKPLGRXTLPPGGTNCPSHIPXRG 161
Query: 112 HNGLKSISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
HNG++S N RLR+GIGRP + HVLG FS E+ LP
Sbjct: 162 HNGVRSCISCLNSNAMPRLRVGIGRPTHPEAVQAHVLGCFSPAEQEL-----------LP 210
Query: 171 LLAKREDVSFLNHI 184
LL R L+HI
Sbjct: 211 LLLDRATDLILDHI 224
>gi|328473490|gb|EGF44338.1| peptidyl-tRNA hydrolase [Vibrio parahaemolyticus 10329]
Length = 196
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + KF ++G L+ P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARVHNVTLKNEPKFFGLTGRIMVNGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E +V HD+LDL G + K GGG GHNGL+ K
Sbjct: 67 TTFMNLSGKAIAALAKFYQI-KPEEIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDTISK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K++ RLRIGIG P + VLG + E+ L D R L +L K
Sbjct: 126 LGNNKDFYRLRIGIGHPGHKDKVAGFVLGKAPAKEQELLDAAADEAVRCLDILIK 180
>gi|54309999|ref|YP_131019.1| peptidyl-tRNA hydrolase [Photobacterium profundum SS9]
gi|68052961|sp|Q6LNA9|PTH_PHOPR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|46914438|emb|CAG21217.1| putative peptidyl-tRNA hydrolase [Photobacterium profundum SS9]
Length = 196
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G + + H ++ K+ +G L+ P
Sbjct: 7 LLVGLANPGAEYAKTRHNAGAWVVQELARVHNVSLREESKYFGVTGRITTNGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ + NF+++ E L+ HD+LDL G + K GGG GHNGL+ K
Sbjct: 67 TTYMNLSGKSVAALANFFQIKP-EEILIAHDELDLPPGVAKFKKGGGHGGHNGLRDTISK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N + RLR+GIG P D + VLG E+ + +D R + +L K
Sbjct: 126 MGNNKEFYRLRVGIGHPGDKNKVANFVLGKAPVKEQECIDAAVDEAVRCMDILLK 180
>gi|219870978|ref|YP_002475353.1| peptidyl-tRNA hydrolase [Haemophilus parasuis SH0165]
gi|254783871|sp|B8F503|PTH_HAEPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219691182|gb|ACL32405.1| peptidyl-tRNA hydrolase [Haemophilus parasuis SH0165]
Length = 194
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y E RHN G ++ + F+ + K+ ++++ L+ P
Sbjct: 6 LIVGLANPGAKYEETRHNAGEWLVNELARVFNVTLKEEAKYFGKVAKINTPQGEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LV HD+LDL G ++K GGG GHNGLK I
Sbjct: 66 TTFMNLSGKAVGSLANFYRI-KPEEILVAHDELDLLPGVAKIKQGGGHGGHNGLKDIIAA 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ R+RIGIG P + +VLG S ++ + +D +R + LL K V
Sbjct: 125 LGNSNNFYRVRIGIGHPGHKDLVASYVLGKPSPSDQPLINVAVDEASRCVELLFKEGIVK 184
Query: 180 FLNHI 184
N +
Sbjct: 185 ATNRL 189
>gi|47227662|emb|CAG09659.1| unnamed protein product [Tetraodon nigroviridis]
Length = 232
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 12/162 (7%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQL----DGLRTI 57
+V GLGNPG + RH++G + + + W+ H G++ + +
Sbjct: 62 LVVGLGNPGMD--GTRHSVGMAVLGALAARLRVADRWRPDKHVS---GEVIVCEEPTSVV 116
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L++P+ MN++G S+ Y + E+ L++HD+LD G + +K GG GHNG++S
Sbjct: 117 LLRPRLLMNVNGVSVARAAGKYGI-QPEDILLVHDELDKPLGKISIKQGGSPRGHNGVRS 175
Query: 118 ISEKCGKNY-KRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+ + RLR+GIGRP + + RHVLG FS E+ L
Sbjct: 176 CIDCLQTDVMPRLRVGIGRPAGKSSVERHVLGRFSCEEKKVL 217
>gi|54298642|ref|YP_125011.1| peptidyl-tRNA hydrolase [Legionella pneumophila str. Paris]
gi|68052900|sp|Q5X1N7|PTH_LEGPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|53752427|emb|CAH13859.1| hypothetical protein lpp2706 [Legionella pneumophila str. Paris]
Length = 189
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 100/186 (53%), Gaps = 7/186 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG Y + RHN G + + H+ HF KK AE++E ++ L
Sbjct: 5 LIVGLRNPGSAYEQTRHNAGAWLVTALAQRHNSHF--KIDKKMQAELTEIDINNHPCRLA 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMN SGQ+ + FYK+ E L++HD+LDL G ++LKTGGG GHNGL+ I+
Sbjct: 63 LPLTFMNHSGQTTRIISQFYKIEPGE-ILIVHDELDLPVGRIKLKTGGGHGGHNGLRDIT 121
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G + RLRIGIG P + ++VL S +R + ID +P++ +
Sbjct: 122 AQLGTGEFHRLRIGIGHPGHKDLVHQYVLSRPSMHDRQQIYDAIDRGIAIIPIVLSGDMA 181
Query: 179 SFLNHI 184
+N +
Sbjct: 182 RAMNQV 187
>gi|148358612|ref|YP_001249819.1| peptidyl tRNA hydrolase [Legionella pneumophila str. Corby]
gi|296108298|ref|YP_003619999.1| peptidyl-tRNA hydrolase, PTH1 family [Legionella pneumophila
2300/99 Alcoy]
gi|166199356|sp|A5IAS3|PTH_LEGPC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148280385|gb|ABQ54473.1| peptidyl tRNA hydrolase [Legionella pneumophila str. Corby]
gi|295650200|gb|ADG26047.1| peptidyl-tRNA hydrolase, PTH1 family [Legionella pneumophila
2300/99 Alcoy]
Length = 189
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 101/186 (54%), Gaps = 7/186 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GL NPG Y + RHN G + + H+ HF KK AE++E ++ L+
Sbjct: 5 LIVGLRNPGSAYEQTRHNAGAWLVTALAQRHNSHF--KIDKKMQAELTEIDINNHPCRLV 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P +FMN SGQ+ + FYK+ E L++HD+LDL G ++LKTGGG GHNGL+ I+
Sbjct: 63 LPLSFMNHSGQTTRIISQFYKIEPGE-ILIVHDELDLPVGRIKLKTGGGHGGHNGLRDIT 121
Query: 120 EKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G + RLRIGIG P + ++VL S +R + ID +P++ +
Sbjct: 122 AQLGTGVFHRLRIGIGHPGHKDLVHQYVLSRPSMHDRQQIYDAIDRGIAIIPIVLSGDMA 181
Query: 179 SFLNHI 184
+N +
Sbjct: 182 RAMNQV 187
>gi|29655128|ref|NP_820820.1| peptidyl-tRNA hydrolase [Coxiella burnetii RSA 493]
gi|161831131|ref|YP_001597665.1| peptidyl-tRNA hydrolase [Coxiella burnetii RSA 331]
gi|46576785|sp|Q83AP0|PTH_COXBU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038287|sp|A9NAT7|PTH_COXBR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|29542397|gb|AAO91334.1| peptidyl-tRNA hydrolase [Coxiella burnetii RSA 493]
gi|161762998|gb|ABX78640.1| peptidyl-tRNA hydrolase [Coxiella burnetii RSA 331]
Length = 187
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 98/174 (56%), Gaps = 7/174 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++AGLGNPG +Y RHN+G ++ + + A + KFH +++ L+KP
Sbjct: 7 LIAGLGNPGDQYARTRHNVGAWFLETLAQQRNQSLAKENKFHGFVAKCN----DYWLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ++ + +FYK+ E L+ HD+LD G +RLK GGG GHNGL++I +
Sbjct: 63 TTFMNESGQAVAALAHFYKIKPSE-ILIAHDELDFPAGDIRLKEGGGHGGHNGLRNIIQH 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G ++ RLRIGI P + +VL S +R +L I+ R +P L +
Sbjct: 122 LGSSDFYRLRIGINHPGHKDRVTPYVLSPPSENDRIAILAAIEKGLRLIPELVQ 175
>gi|187732998|ref|YP_001879987.1| peptidyl-tRNA hydrolase [Shigella boydii CDC 3083-94]
gi|238691753|sp|B2TZV2|PTH_SHIB3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|187429990|gb|ACD09264.1| peptidyl-tRNA hydrolase [Shigella boydii CDC 3083-94]
Length = 194
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 92/168 (54%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G +LK GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKLKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 171
>gi|318605421|emb|CBY26919.1| peptidyl-tRNA hydrolase [Yersinia enterocolitica subsp. palearctica
Y11]
Length = 197
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 101/190 (53%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + L L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGGWYVDLLAQRHNQQLKEESKFFGYTARLNLADQDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG++++ + FY+ LP E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 66 STFMNLSGKAVVAMAGFYRILP--EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N+ RLRIGIG P D + + VLG + E+ + ID R +L K +
Sbjct: 124 KFGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQTLIDDAIDESIRCTEVLLKEDIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 RAMNRLHSFK 193
>gi|118349377|ref|XP_001033565.1| peptidyl-tRNA hydrolase, putative [Tetrahymena thermophila]
gi|89287914|gb|EAR85902.1| peptidyl-tRNA hydrolase, putative [Tetrahymena thermophila SB210]
Length = 228
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 94/190 (49%), Gaps = 19/190 (10%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEIS---EGQL---- 51
F + GLGNP Y + H+IG + I+ R++ F + K F A + G+
Sbjct: 39 FYLYGLGNPSPNYDKTLHSIGKVYINHLARVYKAEFKQSRGKGFFAAFNFANRGEYALIR 98
Query: 52 --DGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGD 109
G + L K +FMNLSG + + N ++HDDL+ G ++K GG
Sbjct: 99 NSKGEQVALFKSDSFMNLSGVPYKQFLKNCDTIQYANQYIVHDDLESKPGKFKIKNGGSP 158
Query: 110 AGHNGLKSISEKCG-KNYKRLRIGIGRP--PDTAHIIRHVLGNFSSPE--RY--FLLPII 162
GHNGLKSI + G K+++RL+IGIGRP D + +V N SS E RY + P I
Sbjct: 159 EGHNGLKSIIDSIGSKDFQRLKIGIGRPDSKDPEVVANYVTSNISSEEYRRYKEEIFPQI 218
Query: 163 DNIARSLPLL 172
D + +L
Sbjct: 219 DEFLKKNNIL 228
>gi|217076516|ref|YP_002334232.1| peptidyl-tRNA hydrolase [Thermosipho africanus TCF52B]
gi|217036369|gb|ACJ74891.1| peptidyl-tRNA hydrolase [Thermosipho africanus TCF52B]
Length = 159
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 80/140 (57%), Gaps = 9/140 (6%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
M IDR+ + +KK+ + + + L G + +KP T+MNLSG E+ + +
Sbjct: 1 MFIDRVCN-----NFKKQNNYKYCQKTLFGKDILFVKPFTYMNLSG----EIFRYLNKED 51
Query: 84 LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHII 143
+ +V++DD++L G +R++ G GHNG+KS+ G+++KR+RIGIG P+ +++
Sbjct: 52 FSDIIVVYDDVNLPLGKIRIRKSGSSGGHNGIKSLISYLGEDFKRIRIGIGPIPENVNLV 111
Query: 144 RHVLGNFSSPERYFLLPIID 163
VLG F E L ++D
Sbjct: 112 DFVLGEFEEDELKVLDKVLD 131
>gi|154707189|ref|YP_001423505.1| peptidyl-tRNA hydrolase [Coxiella burnetii Dugway 5J108-111]
gi|212211869|ref|YP_002302805.1| peptidyl-tRNA hydrolase [Coxiella burnetii CbuG_Q212]
gi|189038286|sp|A9KF13|PTH_COXBN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226694251|sp|B6J330|PTH_COXB2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|154356475|gb|ABS77937.1| peptidyl-tRNA hydrolase [Coxiella burnetii Dugway 5J108-111]
gi|212010279|gb|ACJ17660.1| peptidyl-tRNA hydrolase [Coxiella burnetii CbuG_Q212]
Length = 187
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 97/174 (55%), Gaps = 7/174 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++AGLGNPG +Y RHN+G ++ + + A + KFH +++ L+KP
Sbjct: 7 LIAGLGNPGDQYARTRHNVGAWFLETLAQQRNQSLAKENKFHGFVAKCN----DYWLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ++ + FYK+ E L+ HD+LD G +RLK GGG GHNGL++I +
Sbjct: 63 TTFMNESGQAVAALARFYKIKPSE-ILIAHDELDFPAGDIRLKEGGGHGGHNGLRNIIQH 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G ++ RLRIGI P + +VL S +R +L I+ R +P L +
Sbjct: 122 LGSSDFYRLRIGINHPGHKDRVTPYVLSPPSENDRIAILAAIEKGLRLIPELVQ 175
>gi|330432671|gb|AEC17730.1| peptidyl-tRNA hydrolase [Gallibacterium anatis UMN179]
Length = 195
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 99/176 (56%), Gaps = 6/176 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I R+ F + KF + + + G L+ P
Sbjct: 6 LIVGLGNPGSKYEDTRHNAGEWMIARLARRFSVSLKEENKFFGKTAMATISGKDIRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG+S+ + NFY+ LP E LVIHD+LDL G+++LK GGG GHNGLK I
Sbjct: 66 TTFMNLSGKSVGALANFYRILP--EEILVIHDELDLPPGSVKLKLGGGHGGHNGLKDIIA 123
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ KN+ RLR+GIG P D + +VL + ++ + +D + +L K
Sbjct: 124 QLANNKNFYRLRVGIGHPGDKNLVASYVLSKPAPQDQRLIDKALDEAESCIDILIK 179
>gi|297539289|ref|YP_003675058.1| peptidyl-tRNA hydrolase [Methylotenera sp. 301]
gi|297258636|gb|ADI30481.1| peptidyl-tRNA hydrolase [Methylotenera sp. 301]
Length = 192
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 90/155 (58%), Gaps = 4/155 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GF ID + + + A KF ++ T L+KP
Sbjct: 7 LLVGLGNPGEKYTTTRHNAGFWWIDEVAAQTNSKLALDAKFFG-VAGKLASKADTWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+S+ + N+YK+ E LVIHD+LDL G L+LK GGG GHNGLK I
Sbjct: 66 TTFMNASGKSVAALANYYKITPAE-ILVIHDELDLPAGGLKLKVGGGHGGHNGLKDIETA 124
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G K++ RLR+GIG P D ++ VL + E+
Sbjct: 125 LGTKDFWRLRLGIGHPGDRNEVVNFVLKAPTKDEQ 159
>gi|88810858|ref|ZP_01126115.1| peptidyl-tRNA hydrolase [Nitrococcus mobilis Nb-231]
gi|88792488|gb|EAR23598.1| peptidyl-tRNA hydrolase [Nitrococcus mobilis Nb-231]
Length = 202
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 97/174 (55%), Gaps = 3/174 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN GF +D I F + ++KF ++ ++ + L+KP
Sbjct: 10 LLIGLGNPGPRYSRTRHNAGFWLLDEILRRFGGSFSTQRKFQGDVGRVRIGNIECHLLKP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG ++ + + +Y+L + LV +DD+DL G RLK GGG GHNGL+ +
Sbjct: 70 MTYMNHSGLAIGQFVRYYRL-EPRSILVAYDDIDLLPGVTRLKQGGGHGGHNGLRDTANA 128
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G +++ RLRIG+G P +I +VL S E+ + I + LPL+ +
Sbjct: 129 LGTRDFNRLRIGVGHPGHRDDVIGYVLSAPSREEQEAIEAGITDACGILPLVVE 182
>gi|258591288|emb|CBE67585.1| peptidyl-tRNA hydrolase [NC10 bacterium 'Dutch sediment']
Length = 191
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 91/165 (55%), Gaps = 2/165 (1%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFM 65
GLGNPG EY +RHN+GF +D + + ++ + G + G + +LIKP TFM
Sbjct: 2 GLGNPGPEYEVSRHNVGFRVVDTLADRAGVTLTRCRYRSLFVRGSIHGAQVLLIKPLTFM 61
Query: 66 NLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-K 124
N SG S+ +L + +V+HDDLDL LR++ GGG GH G++S+ E G
Sbjct: 62 NESGFSVSRWQQALRL-DPGRIIVVHDDLDLPPSQLRIRVGGGHGGHRGIRSVIEAIGSS 120
Query: 125 NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
++ R+++GIGRP D + HVLG F + L I A ++
Sbjct: 121 DFLRVKVGIGRPQDGQDAVTHVLGPFEECDGGVLEAAIQRAADAV 165
>gi|269961564|ref|ZP_06175926.1| Peptidyl-tRNA hydrolase [Vibrio harveyi 1DA3]
gi|269833605|gb|EEZ87702.1| Peptidyl-tRNA hydrolase [Vibrio harveyi 1DA3]
Length = 196
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + KF ++G L+ P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARVHNVTLKNEPKFFGLTGRIMVNGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E +V HD+LDL G + K GGG GHNGL+ K
Sbjct: 67 TTFMNLSGKAIAALAKFYQI-KPEEIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDTISK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K++ RLRIGIG P + VLG + E+ L D R L +L K
Sbjct: 126 LGNNKDFYRLRIGIGHPGHKDKVAGFVLGKAPAKEQELLDAAADESVRCLDILIK 180
>gi|229528809|ref|ZP_04418199.1| peptidyl-tRNA hydrolase [Vibrio cholerae 12129(1)]
gi|229332583|gb|EEN98069.1| peptidyl-tRNA hydrolase [Vibrio cholerae 12129(1)]
Length = 196
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + KF ++ ++ P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLINNQELRVLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E +V HD+LDL G + K GGG GHNGLK K
Sbjct: 67 TTFMNLSGKAIAALANFYQI-KPEEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTISK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N + RLR+GIG P + +VLG + E+ L +D R L +L K
Sbjct: 126 LGNNKEFYRLRLGIGHPGHKDKVSGYVLGKAPAKEQECLDAAVDESVRCLEILLK 180
>gi|168777786|ref|ZP_02802793.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4196]
gi|187767042|gb|EDU30886.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4196]
Length = 192
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F P HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAAMASFSAYPTKSGG---HDELDLPPGVAKFKLGGGHGGHNGLKDIISK 121
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G N + RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 122 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 169
>gi|157962951|ref|YP_001502985.1| peptidyl-tRNA hydrolase [Shewanella pealeana ATCC 700345]
gi|157847951|gb|ABV88450.1| Aminoacyl-tRNA hydrolase [Shewanella pealeana ATCC 700345]
Length = 208
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 89/173 (51%), Gaps = 4/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y RHN G ++ + K+ + L G L+ P
Sbjct: 20 LIVGLANPGAQYERTRHNAGAWYVEELARVCGATLTLDSKYFGMTARVTLHGKDVRLLIP 79
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I K
Sbjct: 80 TTFMNLSGKSVGALANFFRIAP-EEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIAK 138
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
K + RLRIGIG P D + + +VL S ++ + ID RS +L
Sbjct: 139 LANDKGFYRLRIGIGHPGDKSQVSNYVLSKASPTDQELMDAAIDEAVRSTEVL 191
>gi|269138750|ref|YP_003295451.1| peptidyl-tRNA hydrolase [Edwardsiella tarda EIB202]
gi|267984411|gb|ACY84240.1| peptidyl-tRNA hydrolase [Edwardsiella tarda EIB202]
gi|304558743|gb|ADM41407.1| Peptidyl-tRNA hydrolase [Edwardsiella tarda FL6-60]
Length = 196
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + L G L+ P
Sbjct: 5 LIVGLANPGAEYAQTRHNAGAWFVDALAERHGQSLKEESKFFGYTARLSLAGHDLRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ + LV HD+LDL G +LK GGG+ GHNGLK I K
Sbjct: 65 TTFMNLSGKAVSALAGFYRIAP-DEILVAHDELDLPPGVAKLKLGGGNGGHNGLKDIQSK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G N+ RLRIGIG P D + ++ VLG + E+ + ID R LL +
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKSKVVGFVLGKPLASEQPLIDEAIDEALRCTDLLMQE 179
>gi|327481914|gb|AEA85224.1| peptidyl-tRNA hydrolase [Pseudomonas stutzeri DSM 4166]
Length = 194
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 93/164 (56%), Gaps = 4/164 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++R+ + + +K+ + + G L+ P
Sbjct: 6 LIVGLGNPGPEYDQTRHNAGALFVERLAAREGVSLSNDRKYFGLVGKFSHQGEDIRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + F+++P E+ LV HD+LD+ G +LK GGG GHNGL+ I K
Sbjct: 66 TTYMNRSGQAVAALAGFFRIPP-ESILVAHDELDMPPGVAKLKQGGGHGGHNGLRDIIAK 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
G ++ RLR+GIG P + + +VLG ER L ID
Sbjct: 125 LGNQNSFHRLRLGIGHPGHASLVSGYVLGRAPQAEREKLDASID 168
>gi|325973181|ref|YP_004250245.1| peptidyl-tRNA hydrolase [Mycoplasma suis str. Illinois]
gi|323651783|gb|ADX97865.1| peptidyl-tRNA hydrolase [Mycoplasma suis str. Illinois]
Length = 194
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 90/159 (56%), Gaps = 6/159 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQ-LDGLRTILI 59
M ++ LGNPG EY RHN+GF +D+ HS H ++ ++IS+G L+G + IL
Sbjct: 3 MKVIIALGNPGKEYENTRHNVGFHILDKFHSLHNCSPFENFLGSQISKGNFLNGNKFILC 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRL-KTGGGDAGHNGLKSI 118
KP FMN SG++ +++ +F KL ++ N L+I+D+LD+ G+ L K HNG++ +
Sbjct: 63 KPYEFMNNSGKTFIKLFHFLKL-DINNVLLIYDELDVPLGSYTLTKRKEKKISHNGVRDL 121
Query: 119 SEKCGKNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPER 155
E L+I +G P + II+ + + SPE
Sbjct: 122 -ENFFPLDSILKIKVGIRPQSGKNLIIKDFVMDKFSPEE 159
>gi|153206248|ref|ZP_01945511.1| peptidyl-tRNA hydrolase [Coxiella burnetii 'MSU Goat Q177']
gi|165918157|ref|ZP_02218243.1| peptidyl-tRNA hydrolase [Coxiella burnetii RSA 334]
gi|212217814|ref|YP_002304601.1| peptidyl-tRNA hydrolase [Coxiella burnetii CbuK_Q154]
gi|226694250|sp|B6J9D9|PTH_COXB1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|120577378|gb|EAX34002.1| peptidyl-tRNA hydrolase [Coxiella burnetii 'MSU Goat Q177']
gi|165918017|gb|EDR36621.1| peptidyl-tRNA hydrolase [Coxiella burnetii RSA 334]
gi|212012076|gb|ACJ19456.1| peptidyl-tRNA hydrolase [Coxiella burnetii CbuK_Q154]
Length = 187
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 97/174 (55%), Gaps = 7/174 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++AGLGNPG +Y RHN+G ++ + + A + KFH +++ L+KP
Sbjct: 7 LIAGLGNPGDQYARTRHNVGAWFLETLAQQRNQSLAKENKFHGFVAKCN----DYWLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ++ + FYK+ E L+ HD+LD G +RLK GGG GHNGL++I +
Sbjct: 63 TTFMNESGQAVAALARFYKIKPSE-ILIAHDELDFPAGDIRLKEGGGHGGHNGLRNIIQH 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G ++ RLRIGI P + +VL S +R +L I+ R +P L +
Sbjct: 122 LGSSDFYRLRIGINHPGYKDRVTPYVLSPPSENDRIAILAAIEKGLRLIPELVQ 175
>gi|90414101|ref|ZP_01222084.1| peptidyl-tRNA hydrolase [Photobacterium profundum 3TCK]
gi|90324896|gb|EAS41424.1| peptidyl-tRNA hydrolase [Photobacterium profundum 3TCK]
Length = 196
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 4/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G + + H ++ K+ +G L+ P
Sbjct: 7 LLVGLANPGAEYAKTRHNAGAWVVQELARVHNVTLREESKYFGVTGRITTNGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ + NF+++ E L+ HD+LDL G + K GGG GHNGL+ K
Sbjct: 67 TTYMNLSGKSVAALANFFQIKP-EEILIAHDELDLPPGVAKFKKGGGHGGHNGLRDTISK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G N + RLR+GIG P D + VLG E+ + +D R + +L
Sbjct: 126 MGNNKEFYRLRVGIGHPGDKNKVANFVLGKAPVKEQECIDAAVDEAVRCMDIL 178
>gi|325989624|ref|YP_004249323.1| peptidyl-tRNA hydrolase (PTH) [Mycoplasma suis KI3806]
gi|323574709|emb|CBZ40365.1| Peptidyl-tRNA hydrolase (PTH) [Mycoplasma suis]
Length = 192
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 90/159 (56%), Gaps = 6/159 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQ-LDGLRTILI 59
M ++ LGNPG EY RHN+GF +D+ HS H ++ ++IS+G L+G + IL
Sbjct: 1 MKVIIALGNPGKEYENTRHNVGFHILDKFHSLHNCSPFENFLGSQISKGNFLNGNKFILC 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRL-KTGGGDAGHNGLKSI 118
KP FMN SG++ +++ +F KL ++ N L+I+D+LD+ G+ L K HNG++ +
Sbjct: 61 KPYEFMNNSGKTFIKLFHFLKL-DINNVLLIYDELDVPLGSYTLTKRKEKKISHNGVRDL 119
Query: 119 SEKCGKNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPER 155
E L+I +G P + II+ + + SPE
Sbjct: 120 -ENFFPLDSILKIKVGIRPQSGKNLIIKDFVMDKFSPEE 157
>gi|254787719|ref|YP_003075148.1| peptidyl-tRNA hydrolase [Teredinibacter turnerae T7901]
gi|259535283|sp|C5BT03|PTH_TERTT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|237687265|gb|ACR14529.1| aminoacyl-tRNA hydrolase [Teredinibacter turnerae T7901]
Length = 193
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 84/155 (54%), Gaps = 4/155 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFH-AEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G ++ + P H + L G L+ P
Sbjct: 7 MIVGLGNPGTEYANTRHNAGQDFVENLARALGQPLVNTPKHFGFTTRISLAGKDVRLLVP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ++ + NF+K+ +N LV+HD+LDL GT +LK GGG GHNGL+ I
Sbjct: 67 TTFMNRSGQAVASLANFFKIAP-DNILVVHDELDLPPGTAKLKIGGGHGGHNGLRDIIAA 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G N + RLRIGIG P + + +VL + E
Sbjct: 126 LGNNKEFGRLRIGIGHPGNAKQVASYVLKKAPADE 160
>gi|238919462|ref|YP_002932977.1| peptidyl-tRNA hydrolase, putative [Edwardsiella ictaluri 93-146]
gi|259535175|sp|C5B806|PTH_EDWI9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238869031|gb|ACR68742.1| peptidyl-tRNA hydrolase, putative [Edwardsiella ictaluri 93-146]
Length = 196
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 95/175 (54%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + L G L+ P
Sbjct: 5 LIVGLANPGAEYAQTRHNAGAWFVDALAERHGQSLKEESKFFGYTARLSLAGHDLRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E LV HD+LDL G +LK GGG+ GHNGLK I K
Sbjct: 65 TTFMNLSGKAVSALAGFYRIAPDE-ILVAHDELDLPPGVAKLKLGGGNGGHNGLKDIQSK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLRIGIG P D + ++ VLG + E+ + ID R LL +
Sbjct: 124 LGNNPNFHRLRIGIGHPGDKSKVVGFVLGKPLASEQPLIDDAIDEALRCTDLLMQ 178
>gi|167625131|ref|YP_001675425.1| peptidyl-tRNA hydrolase [Shewanella halifaxensis HAW-EB4]
gi|189038165|sp|B0TR35|PTH_SHEHH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|167355153|gb|ABZ77766.1| Aminoacyl-tRNA hydrolase [Shewanella halifaxensis HAW-EB4]
Length = 194
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 89/173 (51%), Gaps = 4/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y RHN G ++ + K+ + L G L+ P
Sbjct: 6 LIVGLANPGAQYERTRHNAGAWYVEELARVCGATLTLDSKYFGMTARVTLHGKDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I K
Sbjct: 66 TTFMNLSGKSVGALANFFRIAP-EEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIAK 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
K + RLRIGIG P D + + +VL S ++ + +D RS +L
Sbjct: 125 LANDKGFYRLRIGIGHPGDKSQVSNYVLSKASPTDQELMDAAVDEAVRSTEVL 177
>gi|269115196|ref|YP_003302959.1| Peptidyl-tRNA hydrolase [Mycoplasma hominis]
gi|268322821|emb|CAX37556.1| Peptidyl-tRNA hydrolase [Mycoplasma hominis ATCC 23114]
Length = 186
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 95/175 (54%), Gaps = 19/175 (10%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGL-----R 55
M ++ GLGNPG EY + RHN GFM ID++ +K H ++E + +G+
Sbjct: 1 MKLIVGLGNPGVEYEKTRHNTGFMVIDKLA---------EKLHTPLTEKKFNGIYYIDKE 51
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
IL KP TFMN SG + + ++Y + + + +V DLDL G ++ G GHNG+
Sbjct: 52 VILAKPLTFMNNSGDFVRAIKDYYNIVDDDIIIVYD-DLDLPVGKAVIRQKGSSGGHNGM 110
Query: 116 KSISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
K I K + KRL+IGIGR + +I +VLG FS + + IID + +L
Sbjct: 111 KDIIAKLKTDEIKRLKIGIGRGQN---VINYVLGKFSYQDFCTIEKIIDIASDAL 162
>gi|293391725|ref|ZP_06636059.1| peptidyl-tRNA hydrolase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290952259|gb|EFE02378.1| peptidyl-tRNA hydrolase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 194
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 97/175 (55%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G ++R+ F+ + KF + ++G + P
Sbjct: 6 LIVGLGNPGDKYADTRHNAGVWLMERLARRFNVILNPENKFFGYTARAVVNGKEVRFLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LV+HD+LDL GT +LK GGG GHNGLK I +
Sbjct: 66 TTFMNLSGKAVGTLANFYRI-KPEEILVLHDELDLPPGTAKLKLGGGHGGHNGLKDIVAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLRIGIG P + +VL + ER L +D + LL K
Sbjct: 125 LGNSNNFHRLRIGIGHPGHRDLVAGYVLNKPAPSERDALDKALDEATDCVDLLFK 179
>gi|261253603|ref|ZP_05946176.1| peptidyl-tRNA hydrolase [Vibrio orientalis CIP 102891]
gi|260936994|gb|EEX92983.1| peptidyl-tRNA hydrolase [Vibrio orientalis CIP 102891]
Length = 212
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 89/175 (50%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G ++ + H + KF ++G L+ P
Sbjct: 23 LLVGLANPGPEYARTRHNAGAWVVEELARVHNVTLKNEAKFFGLTGRIMVNGQDLRLLIP 82
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E +V HD+LDL G + K GGG GHNGL+ K
Sbjct: 83 TTFMNLSGKAIAALAKFYQI-KPEEIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDTISK 141
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K++ RLRIGIG P + VLG + E+ L D R L +L K
Sbjct: 142 LGNNKDFYRLRIGIGHPGHKDKVAGFVLGKAPAKEQELLDAAADESVRCLDILIK 196
>gi|116617522|ref|YP_817893.1| peptidyl-tRNA hydrolase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|122272277|sp|Q03Z52|PTH_LEUMM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116096369|gb|ABJ61520.1| peptidyl-tRNA hydrolase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 188
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 101/171 (59%), Gaps = 3/171 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G EY + RHNIGFM +D + + K A +++ + G +L+K
Sbjct: 1 MKFIFGLGNIGAEYDQTRHNIGFMAVDAFATANHMSFSPSKQFALVAKTIIGGESVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +++ Y ++++ LV+ DD+DL FG +R + G GHNGLKSI
Sbjct: 61 PTTYMNDSGKAVRAILD-YYDGDVDDVLVLVDDMDLPFGKMRFRAKGSAGGHNGLKSIMT 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSL 169
G + + RL+ G+G P + ++ +VLG F++ E+ + ++D +++
Sbjct: 120 HTGSQTFLRLKFGLGHPVHEQNVVVNYVLGKFTAAEKPDIDAMLDRSTQAI 170
>gi|262274713|ref|ZP_06052524.1| peptidyl-tRNA hydrolase [Grimontia hollisae CIP 101886]
gi|262221276|gb|EEY72590.1| peptidyl-tRNA hydrolase [Grimontia hollisae CIP 101886]
Length = 196
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 94/178 (52%), Gaps = 10/178 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK----FHAEISEGQLDGLRTIL 58
++ GL NPG EY + RHN G ++ + H + K A IS G D LR L
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARIHNVSLKEDKKYFGLTARISVGGED-LR--L 63
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+ P TFMNLSG+S+ + NF+++ E +V HD+LDL G + K GGG GHNGL+ I
Sbjct: 64 LIPTTFMNLSGKSVSALANFFQI-KPEQIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDI 122
Query: 119 SEKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
K G N + RLR+GIG P + +VL + E + +D R + +L K
Sbjct: 123 ISKLGNNNEFYRLRVGIGHPGHKDKVAGYVLTKAPAHEHSQIEQAVDEAVRCIDILLK 180
>gi|15639995|ref|NP_219448.1| peptidyl-tRNA hydrolase [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189026234|ref|YP_001934006.1| peptidyl-tRNA hydrolase [Treponema pallidum subsp. pallidum SS14]
gi|6647698|sp|O83975|PTH_TREPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238689354|sp|B2S4P8|PTH_TREPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|3323339|gb|AAC65962.1| peptidyl-tRNA hydrolase (pth) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018809|gb|ACD71427.1| peptidyl-tRNA hydrolase [Treponema pallidum subsp. pallidum SS14]
gi|291060368|gb|ADD73103.1| peptidyl-tRNA hydrolase [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 202
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 91/159 (57%), Gaps = 11/159 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEIS-----EGQLDGLRTI 57
++ LGNPG EY E RHN ++ + + P W+ I+ EG +
Sbjct: 5 LIVFLGNPGAEYEETRHNAAWLLLTYLFPSIVLP-WRCGCRGSIARIEGFEGSSE--EVW 61
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KP T+MN SG+S+ F + + + LV+HD+L+L FG + LK GGG GHNGL+S
Sbjct: 62 LLKPLTYMNRSGKSVGAACAFLQ-TDAKQLLVVHDELELPFGVVSLKQGGGLGGHNGLRS 120
Query: 118 ISEKCG-KNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPE 154
I E G ++ RLRIGIGRPP ++ +I ++VL F E
Sbjct: 121 IKEVLGTADFWRLRIGIGRPPSESVNIAQYVLSAFYPAE 159
>gi|289523177|ref|ZP_06440031.1| aminoacyl-tRNA hydrolase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503720|gb|EFD24884.1| aminoacyl-tRNA hydrolase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 175
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 6/157 (3%)
Query: 17 NRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLD--GLRTILIKPQTFMNLSGQSLL 73
RHN+G++ +D + + F ++ + + + G LD G R L+KP TFMNLSG+S++
Sbjct: 2 TRHNVGWLAMDALLEKLNKFAGFQYRCNG-MMWGPLDVEGERVYLLKPLTFMNLSGRSVV 60
Query: 74 EVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK-NYKRLRIG 132
+ + N N L+++DD+ L FG LRL+ G GHNG+ S+ G RLRIG
Sbjct: 61 QAKRELNIDN-NNILIVYDDIYLPFGKLRLRAKGSAGGHNGMASVIGALGTLEIPRLRIG 119
Query: 133 IGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
GR +I VL F E L +++ A+++
Sbjct: 120 TGREEPIEDLIGFVLSPFDEEEMKALPDVLERAAKAI 156
>gi|156973544|ref|YP_001444451.1| peptidyl-tRNA hydrolase [Vibrio harveyi ATCC BAA-1116]
gi|166229465|sp|A7MY77|PTH_VIBHB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|156525138|gb|ABU70224.1| hypothetical protein VIBHAR_01245 [Vibrio harveyi ATCC BAA-1116]
Length = 196
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + KF ++G L+ P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARVHNVTLKNEPKFFGLTGRIMVNGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E +V HD+LDL G + K GGG GHNGL+ K
Sbjct: 67 TTFMNLSGKAIAALAKFYQI-KPEEIMVAHDELDLLPGVAKFKKGGGHGGHNGLRDTISK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K++ RLRIGIG P + VLG + E+ L D R L +L K
Sbjct: 126 LGNNKDFYRLRIGIGHPGHKDKVAGFVLGKAPAKEQELLDAAADESVRCLDILIK 180
>gi|145519768|ref|XP_001445745.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413211|emb|CAK78348.1| unnamed protein product [Paramecium tetraurelia]
Length = 188
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 75/138 (54%), Gaps = 14/138 (10%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT----IL 58
++ GLGNPG Y RHN G + F K+F+ ++S+GQ + + IL
Sbjct: 23 LIVGLGNPGKIYENTRHNAGQL---------FIKHLAKEFNIKMSDGQNGAIGSFQHIIL 73
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
P +FMN SG + ++ + + N +++HDDLD G ++K GG GHNGLKSI
Sbjct: 74 FNPLSFMNSSGHPIKKIADKANI-QTSNIIIVHDDLDNLPGRCKIKQGGSAEGHNGLKSI 132
Query: 119 SEKCGKNYKRLRIGIGRP 136
+ + RL+IGIGRP
Sbjct: 133 IQYMDDKFIRLKIGIGRP 150
>gi|15599867|ref|NP_253361.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa PAO1]
gi|107099661|ref|ZP_01363579.1| hypothetical protein PaerPA_01000679 [Pseudomonas aeruginosa PACS2]
gi|116052817|ref|YP_793134.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa UCBPP-PA14]
gi|218893769|ref|YP_002442638.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa LESB58]
gi|254238588|ref|ZP_04931911.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa C3719]
gi|254244436|ref|ZP_04937758.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa 2192]
gi|296391493|ref|ZP_06880968.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa PAb1]
gi|14195078|sp|Q9HVC3|PTH_PSEAE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|122257172|sp|Q02G02|PTH_PSEAB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226723259|sp|B7V0L8|PTH_PSEA8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|9950928|gb|AAG08059.1|AE004881_2 peptidyl-tRNA hydrolase [Pseudomonas aeruginosa PAO1]
gi|115588038|gb|ABJ14053.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170519|gb|EAZ56030.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa C3719]
gi|126197814|gb|EAZ61877.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa 2192]
gi|218773997|emb|CAW29812.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa LESB58]
Length = 194
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 4/171 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++R+ H+ +K+ + + G L+ P
Sbjct: 6 LIVGLGNPGPEYDQTRHNAGALFVERLAHAQGVSLVADRKYFGLVGKFSHQGKDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + F+++ + LV HD+LD+ G +LKTGGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALAGFFRIAP-DAILVAHDELDMPPGVAKLKTGGGHGGHNGLRDIIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G ++ RLR+GIG P ++ + +VLG E+ L ID LP
Sbjct: 125 LGNQNSFHRLRLGIGHPGHSSLVSGYVLGRAPRSEQELLDTSIDFALGVLP 175
>gi|218961880|ref|YP_001741655.1| peptidyl-tRNA hydrolase [Candidatus Cloacamonas acidaminovorans]
gi|167730537|emb|CAO81449.1| peptidyl-tRNA hydrolase [Candidatus Cloacamonas acidaminovorans]
Length = 198
Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 105/188 (55%), Gaps = 18/188 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL-DGL---RT 56
M ++ GLGNPG E+ NRHN+GF+C+DR W ++G + D + R
Sbjct: 1 MKLIIGLGNPGKEFANNRHNLGFICLDR---------WALGRERNFAKGDVFDYIVLKRA 51
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+LIKP+T+MN SG+++ + + + + Y+VI+DD++L +R++ GGGD GHNG+K
Sbjct: 52 VLIKPKTWMNRSGEAIKQALKQWI---ISEYMVIYDDIELPVAKIRIRQGGGDGGHNGIK 108
Query: 117 S-ISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
S ++ + KR+RIGIGR + +VL + E L P +D + + L K
Sbjct: 109 SLLAVIPPEELKRIRIGIGR-NNEIDPQNYVLSDILPEEWELLNPALDQAGKFIDLYIKY 167
Query: 176 EDVSFLNH 183
+ + LN
Sbjct: 168 DFNAVLNE 175
>gi|261868210|ref|YP_003256132.1| peptidyl-tRNA hydrolase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261413542|gb|ACX82913.1| peptidyl-tRNA hydrolase [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 227
Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 97/175 (55%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ G+GNPG +Y + RHN G ++R+ F+ + KF + ++G + P
Sbjct: 39 LIVGIGNPGDKYADTRHNAGVWLMERLARRFNVILNPENKFFGYTAHAVVNGKEVRFLVP 98
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LV+HD+LDL GT +LK GGG GHNGLK I +
Sbjct: 99 TTFMNLSGKAVGTLANFYRI-KPEEILVLHDELDLPPGTAKLKLGGGHGGHNGLKDIVAQ 157
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLRIGIG P + +VL + ER L +D + LL K
Sbjct: 158 LGNSNNFHRLRIGIGHPGHRDLVAGYVLNKPAPSERDALDKALDEATDCVELLFK 212
>gi|51596325|ref|YP_070516.1| peptidyl-tRNA hydrolase [Yersinia pseudotuberculosis IP 32953]
gi|149366057|ref|ZP_01888092.1| peptidyl-tRNA hydrolase [Yersinia pestis CA88-4125]
gi|167470769|ref|ZP_02335473.1| peptidyl-tRNA hydrolase [Yersinia pestis FV-1]
gi|218929122|ref|YP_002346997.1| peptidyl-tRNA hydrolase [Yersinia pestis CO92]
gi|229894720|ref|ZP_04509900.1| peptidyl-tRNA hydrolase [Yersinia pestis Pestoides A]
gi|229897420|ref|ZP_04512576.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229898063|ref|ZP_04513214.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229901932|ref|ZP_04517053.1| peptidyl-tRNA hydrolase [Yersinia pestis Nepal516]
gi|21263849|sp|Q8ZEY4|PTH_YERPE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052918|sp|Q66AY1|PTH_YERPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391038|sp|Q1C861|PTH_YERPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391039|sp|Q1CJK8|PTH_YERPN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|51589607|emb|CAH21237.1| peptidyl-tRNA hydrolase [Yersinia pseudotuberculosis IP 32953]
gi|115347733|emb|CAL20648.1| peptidyl-tRNA hydrolase [Yersinia pestis CO92]
gi|149292470|gb|EDM42544.1| peptidyl-tRNA hydrolase [Yersinia pestis CA88-4125]
gi|229680828|gb|EEO76923.1| peptidyl-tRNA hydrolase [Yersinia pestis Nepal516]
gi|229689104|gb|EEO81169.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229693757|gb|EEO83806.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229702193|gb|EEO90212.1| peptidyl-tRNA hydrolase [Yersinia pestis Pestoides A]
gi|320015313|gb|ADV98884.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 196
Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEESKFFGYTARLNLAGQDIRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG+++ + +FY+ LP E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 66 ATFMNLSGKAVAAMASFYRILP--EEILVAHDELDILPGMAKLKLGGGNGGHNGLKDIQN 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
K G N+ RLRIGIG P D + + VLG + E+ + ID R +L
Sbjct: 124 KLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQTLIDDAIDESIRCTEVL 177
>gi|227432634|ref|ZP_03914610.1| peptidyl-tRNA hydrolase [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
gi|227351604|gb|EEJ41854.1| peptidyl-tRNA hydrolase [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
Length = 193
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 99/166 (59%), Gaps = 3/166 (1%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFM 65
GLGN G EY + RHNIGFM +D + + K A +++ + G +L+KP T+M
Sbjct: 11 GLGNIGAEYDQTRHNIGFMAVDAFATANHMSFSPSKQFALVAKTIIGGESVMLVKPTTYM 70
Query: 66 NLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-K 124
N SG+++ +++ Y ++++ LV+ DD+DL FG +R + G GHNGLKSI G +
Sbjct: 71 NNSGKAVRAILD-YYDGDVDDVLVLVDDMDLPFGKMRFRAKGSAGGHNGLKSIMTHTGSQ 129
Query: 125 NYKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ RL+ G+G P + ++ +VLG F++ E+ + ++D +++
Sbjct: 130 TFLRLKFGLGHPVHEQNVVVNYVLGKFTAAEKPDIDAMLDRSTQAI 175
>gi|119904150|ref|XP_001252706.1| PREDICTED: peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)-like
isoform 1 [Bos taurus]
gi|297480756|ref|XP_002691674.1| PREDICTED: peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)-like
isoform 2 [Bos taurus]
gi|296482110|gb|DAA24225.1| peptidyl-tRNA hydrolase 1 homolog-like isoform 2 [Bos taurus]
Length = 165
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 4/130 (3%)
Query: 37 AWKK--KFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDL 94
+W++ + A++++ L + +L++P+ MNL+G S+ + + + L E YLV HD+L
Sbjct: 16 SWERDRRCAADLAQASLGDAQLVLLRPRRLMNLNGHSVAQAVELFGLTAEEVYLV-HDEL 74
Query: 95 DLDFGTLRLKTGGGDAGHNGLKSISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSP 153
D G + LK GG GHNG++S N RL++GIGRP + +VLG FS
Sbjct: 75 DKPLGKVALKLGGSARGHNGVRSCMSCLNSNAMPRLQVGIGRPTHRDAVQAYVLGRFSPA 134
Query: 154 ERYFLLPIID 163
E+ L P+++
Sbjct: 135 EQELLPPVLE 144
>gi|94309232|ref|YP_582442.1| peptidyl-tRNA hydrolase [Cupriavidus metallidurans CH34]
gi|119390987|sp|Q1LRQ3|PTH_RALME RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|93353084|gb|ABF07173.1| peptidyl-tRNA hydrolase [Cupriavidus metallidurans CH34]
Length = 198
Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 5/137 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ + +FH +L L+KP
Sbjct: 4 LIVGLGNPGAEYEATRHNAGFWLVDQLARMGGTTLRVESRFHGLAGRARLWDQDVWLLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMN SG S++ + FYK LP+ +V HD++DL G+ +LK GGG GHNGLK IS
Sbjct: 64 STFMNRSGLSVVSLARFYKILPD--EIVVAHDEMDLPAGSAKLKRGGGSGGHNGLKDISA 121
Query: 121 K-CGKNYKRLRIGIGRP 136
++Y RLRIG+G P
Sbjct: 122 HLTTQDYWRLRIGVGHP 138
>gi|317491746|ref|ZP_07950181.1| peptidyl-tRNA hydrolase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920180|gb|EFV41504.1| peptidyl-tRNA hydrolase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 196
Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + + + KF+ + L G L+ P
Sbjct: 5 LIVGLANPGAEYAQTRHNAGAWFVDALAERNGQSLKEESKFYGYTARLNLAGNDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ + LV HD+LDL G +LK GGG+ GHNGLK I K
Sbjct: 65 TTFMNLSGKAVAALATFYRI-QPDEILVAHDELDLPPGVAKLKLGGGNGGHNGLKDIQSK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G N+ RLRIGIG P D ++ VLG + E+ + ID R +L K
Sbjct: 124 LGNNPNFYRLRIGIGHPGDKNKVVGFVLGKPLASEQPLIDDAIDEALRCTEVLLKE 179
>gi|22126182|ref|NP_669605.1| peptidyl-tRNA hydrolase [Yersinia pestis KIM 10]
gi|45441663|ref|NP_993202.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Microtus str.
91001]
gi|108807390|ref|YP_651306.1| peptidyl-tRNA hydrolase [Yersinia pestis Antiqua]
gi|108811655|ref|YP_647422.1| peptidyl-tRNA hydrolase [Yersinia pestis Nepal516]
gi|145598403|ref|YP_001162479.1| peptidyl-tRNA hydrolase [Yersinia pestis Pestoides F]
gi|162419541|ref|YP_001606885.1| peptidyl-tRNA hydrolase [Yersinia pestis Angola]
gi|165926493|ref|ZP_02222325.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165938866|ref|ZP_02227420.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
IP275]
gi|166009227|ref|ZP_02230125.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166210569|ref|ZP_02236604.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401435|ref|ZP_02306932.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167420300|ref|ZP_02312053.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424700|ref|ZP_02316453.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|186895367|ref|YP_001872479.1| peptidyl-tRNA hydrolase [Yersinia pseudotuberculosis PB1/+]
gi|270490885|ref|ZP_06207959.1| aminoacyl-tRNA hydrolase [Yersinia pestis KIM D27]
gi|294503917|ref|YP_003567979.1| peptidyl-tRNA hydrolase [Yersinia pestis Z176003]
gi|21959147|gb|AAM85856.1|AE013832_6 peptidyl-tRNA hydrolase [Yersinia pestis KIM 10]
gi|45436525|gb|AAS62079.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Microtus str.
91001]
gi|108775303|gb|ABG17822.1| peptidyl-tRNA hydrolase [Yersinia pestis Nepal516]
gi|108779303|gb|ABG13361.1| peptidyl-tRNA hydrolase [Yersinia pestis Antiqua]
gi|145210099|gb|ABP39506.1| peptidyl-tRNA hydrolase [Yersinia pestis Pestoides F]
gi|162352356|gb|ABX86304.1| peptidyl-tRNA hydrolase [Yersinia pestis Angola]
gi|165913229|gb|EDR31852.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
IP275]
gi|165921714|gb|EDR38911.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165991782|gb|EDR44083.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207749|gb|EDR52229.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166961995|gb|EDR58016.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049131|gb|EDR60539.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056582|gb|EDR66351.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|186698393|gb|ACC89022.1| peptidyl-tRNA hydrolase [Yersinia pseudotuberculosis PB1/+]
gi|262365899|gb|ACY62456.1| peptidyl-tRNA hydrolase [Yersinia pestis D182038]
gi|270339389|gb|EFA50166.1| aminoacyl-tRNA hydrolase [Yersinia pestis KIM D27]
gi|294354376|gb|ADE64717.1| peptidyl-tRNA hydrolase [Yersinia pestis Z176003]
Length = 206
Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + L G L+ P
Sbjct: 16 LIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEESKFFGYTARLNLAGQDIRLLVP 75
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG+++ + +FY+ LP E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 76 ATFMNLSGKAVAAMASFYRILP--EEILVAHDELDILPGMAKLKLGGGNGGHNGLKDIQN 133
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
K G N+ RLRIGIG P D + + VLG + E+ + ID R +L
Sbjct: 134 KLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQTLIDDAIDESIRCTEVL 187
>gi|15829252|ref|NP_326612.1| peptidyl-tRNA hydrolase [Mycoplasma pulmonis UAB CTIP]
gi|21263857|sp|Q98PE2|PTH_MYCPU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|14090196|emb|CAC13954.1| PEPTIDYL-TRNA HYDROLASE (PTH) [Mycoplasma pulmonis]
Length = 186
Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 97/173 (56%), Gaps = 13/173 (7%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY + RHN+GFM ID+I K+KF+ +G+ I+ K
Sbjct: 1 MKLIVGLGNPGDEYDKTRHNLGFMVIDKIAEKLNVKLDKEKFNGIFYKGE----NYIISK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG + ++ NF+ + ++I+D++DL G +K G G G++SI E
Sbjct: 57 PLTYMNNSGNFVYDIKNFFDIEIDNI-IIIYDEIDLKVGQASIKIKGSANGQRGMQSIIE 115
Query: 121 KC-GKNYKRLRIGIGRP---PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
K +N KR++IG+ RP P +++I++ + N E+ +ID +A L
Sbjct: 116 KLKTENIKRIKIGVSRPLYEPVSSYILKKIPEN----EKETFEKVIDELADKL 164
>gi|113866400|ref|YP_724889.1| peptidyl-tRNA hydrolase [Ralstonia eutropha H16]
gi|123033305|sp|Q0KEQ0|PTH_RALEH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|113525176|emb|CAJ91521.1| Peptidyl-tRNA hydrolase [Ralstonia eutropha H16]
Length = 198
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ + +FH + +L L+KP
Sbjct: 4 LIVGLGNPGAEYEATRHNAGFWLVDQLARMGGATMRVEGRFHGLAARARLWDQDIWLLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMN SG +++ + FYK LP+ +V HD++DL G +LK GGG GHNGLK IS
Sbjct: 64 STFMNRSGLAVVSLARFYKVLPD--EIVVAHDEMDLPAGAAKLKRGGGAGGHNGLKDISA 121
Query: 121 KCG-KNYKRLRIGIGRP---PDTAHIIRHVLGNF-----SSPERYFLLPIIDNIARSLPL 171
++Y RLR+G+G P P A R + NF E+ + ID L L
Sbjct: 122 HLSTQDYWRLRLGVGHPRNAPGGAGAGREDVVNFVLKPPRREEQEAIDAAIDRCIEPLGL 181
Query: 172 LAKREDVSFLNHIVSVR 188
LA+ + + + + R
Sbjct: 182 LARGDAERAMAQLHTTR 198
>gi|153950891|ref|YP_001401047.1| peptidyl-tRNA hydrolase [Yersinia pseudotuberculosis IP 31758]
gi|167011998|sp|A7FIG9|PTH_YERP3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|152962386|gb|ABS49847.1| peptidyl-tRNA hydrolase [Yersinia pseudotuberculosis IP 31758]
Length = 196
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + L G L+ P
Sbjct: 6 LIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEESKFFGYTARLNLAGQDIRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG+++ + +FY+ LP E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 66 ATFMNLSGKAVAAMASFYRILP--EEILVAHDELDILPGMAKLKLGGGNGGHNGLKDIQN 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
K G N+ RLRIGIG P D + + VLG + E+ + ID R +L
Sbjct: 124 KLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQTLIDNAIDESIRCTEVL 177
>gi|331005806|ref|ZP_08329164.1| Peptidyl-tRNA hydrolase [gamma proteobacterium IMCC1989]
gi|330420387|gb|EGG94695.1| Peptidyl-tRNA hydrolase [gamma proteobacterium IMCC1989]
Length = 193
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGF-MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G ++ + A KF + G + L+ P
Sbjct: 7 LIVGLGNPGAEYANTRHNAGADFVMELARQYDITLAADSKFFGFVGRGTIQNNDVRLLLP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+S+ + FYK+ E LV HD+LDL RLK GGG GHNGL+ I
Sbjct: 67 TTFMNASGKSVAAIAQFYKV-EPEAILVAHDELDLAPSVARLKIGGGHGGHNGLRDIISC 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G KN+ RLRIGI P + + +VL + E + I + +PL
Sbjct: 126 LGNNKNFARLRIGIDHPGNAKLVSNYVLKKAAPTEYQQIEDSIYQATKVIPL 177
>gi|251793996|ref|YP_003008728.1| peptidyl-tRNA hydrolase [Aggregatibacter aphrophilus NJ8700]
gi|247535395|gb|ACS98641.1| peptidyl-tRNA hydrolase [Aggregatibacter aphrophilus NJ8700]
Length = 194
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 101/189 (53%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G I R+ F+ + KF + + ++ + P
Sbjct: 6 LIVGLGNPGDKYADTRHNAGEWLIARLARRFNVTLNAENKFSGYVGKTLINSKEIRFLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LV+HD+LDL G+++LK GGG GHNGLK I
Sbjct: 66 MTFMNLSGKAVGALANFYRI-KPEEILVLHDELDLPPGSVKLKLGGGHGGHNGLKDIVAA 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG P + +VL S ER L +D + LL K V
Sbjct: 125 LGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPSEREALEKALDEATSCVELLFKDGIVK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|170024417|ref|YP_001720922.1| peptidyl-tRNA hydrolase [Yersinia pseudotuberculosis YPIII]
gi|169750951|gb|ACA68469.1| Aminoacyl-tRNA hydrolase [Yersinia pseudotuberculosis YPIII]
Length = 206
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + L G L+ P
Sbjct: 16 LIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEESKFFGYTARLNLAGQDIRLLVP 75
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG+++ + +FY+ LP E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 76 ATFMNLSGKAVAAMASFYRILP--EEILVAHDELDILPGMAKLKLGGGNGGHNGLKDIQN 133
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
K G N+ RLRIGIG P D + + VLG + E+ + ID R +L
Sbjct: 134 KLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQTLIDNAIDESIRCTEVL 187
>gi|297582077|ref|ZP_06943996.1| peptidyl-tRNA hydrolase [Vibrio cholerae RC385]
gi|297533772|gb|EFH72614.1| peptidyl-tRNA hydrolase [Vibrio cholerae RC385]
Length = 196
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + + + KF ++ ++ P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARINNVTLKNEPKFFGLTGRLLINSQELRVLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E +V HD+LDL G + K GGG GHNGLK K
Sbjct: 67 TTFMNLSGKAIAALANFYQI-KPEEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTISK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N + RLR+GIG P + +VLG + E+ L +D R L +L K
Sbjct: 126 LGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEILLK 180
>gi|293607608|ref|ZP_06689942.1| aminoacyl-tRNA hydrolase [Achromobacter piechaudii ATCC 43553]
gi|292814041|gb|EFF73188.1| aminoacyl-tRNA hydrolase [Achromobacter piechaudii ATCC 43553]
Length = 176
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Query: 46 ISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKT 105
+++ L +L+KP T+MN SGQ++ + FYKL E LV+HD+LDL G ++LK
Sbjct: 28 VAKSHLGADNVLLLKPITYMNKSGQAVGALARFYKLAP-EQVLVLHDELDLLPGQVKLKQ 86
Query: 106 GGGDAGHNGLKSISEKCGK-NYKRLRIGIGRP 136
GGG AGHNGLK I G N+ RLRIGIG P
Sbjct: 87 GGGHAGHNGLKDIQAVLGSPNFWRLRIGIGHP 118
>gi|77359995|ref|YP_339570.1| peptidyl-tRNA hydrolase [Pseudoalteromonas haloplanktis TAC125]
gi|119390982|sp|Q3IK86|PTH_PSEHT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|76874906|emb|CAI86127.1| peptidyl-tRNA hydrolase [Pseudoalteromonas haloplanktis TAC125]
Length = 194
Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 99/175 (56%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G I+++ + ++ K+H + + L+ P
Sbjct: 6 MLVGLANPGPEYANTRHNAGAWFIEQLAARYNCTLKHDPKYHGLTGKVIIQDQEFKLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + NF+K+P +E+ LV HD+LDL+ G +LK GGG GHNGLK I K
Sbjct: 66 TTYMNLSGKAVGSLANFFKIP-VESILVAHDELDLEPGVAKLKKGGGHGGHNGLKDIIAK 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
K++ RLRIG+G P + VLG + ++ + ID R + +LAK
Sbjct: 125 MANQKDFMRLRIGVGHPGHREMVTGWVLGKAAKADQEKMDAAIDEAVRCMEILAK 179
>gi|260950521|ref|XP_002619557.1| hypothetical protein CLUG_00716 [Clavispora lusitaniae ATCC 42720]
gi|238847129|gb|EEQ36593.1| hypothetical protein CLUG_00716 [Clavispora lusitaniae ATCC 42720]
Length = 228
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQLDGLRTI 57
+V G+GNP Y RH++G +D++ +F F S+ Q L +
Sbjct: 32 LVVGIGNPTPTYNGTRHSVGHYILDKMIEEYWTNFGSFKPMALNSSFVYSKSQTAELSNV 91
Query: 58 LIKP--QTFMNLSGQSLLEVMNFYKLPNLEN---YLVIHDDLDLDFGTLRLKTGGGDA-G 111
L+ ++MNLSG + ++ Y NL + +V+HD+L + G ++++ A G
Sbjct: 92 LLAKTVSSYMNLSGTPVSKLWQKYHQQNLNSRPAMVVLHDELQVPLGKIQIRRRNTSARG 151
Query: 112 HNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL-PIIDNIARSLP 170
HNGL+SI + G NY +L IGIG+PP + VL FS E L + +A+++
Sbjct: 152 HNGLRSIDQAIGSNYIKLAIGIGKPPQKTSVSDFVLAKFSPVELETLAEQTMPKVAKAMA 211
Query: 171 LLAKREDV 178
AK + +
Sbjct: 212 EFAKGQHI 219
>gi|213855842|ref|ZP_03384082.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 148
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 81/144 (56%), Gaps = 4/144 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L+G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 65 TTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHII 143
G N+ RLR+GIG P D ++
Sbjct: 124 LGNNPNFHRLRVGIGHPGDKNKVV 147
>gi|197335071|ref|YP_002155524.1| peptidyl-tRNA hydrolase [Vibrio fischeri MJ11]
gi|226709072|sp|B5FBW5|PTH_VIBFM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|197316561|gb|ACH66008.1| peptidyl-tRNA hydrolase [Vibrio fischeri MJ11]
Length = 196
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G ++ + H ++ KF Q +G L+ P
Sbjct: 7 LLVGLANPGLEYKRTRHNAGAWVVEELARVHNVSMREESKFFGLTGRIQSNGDDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+ + + FY++ E LV HD+LDL G + K GGG GHNGL+ K
Sbjct: 67 TTFMNLSGKGIAAMAKFYQIKP-EEILVAHDELDLPPGVAKFKKGGGHGGHNGLRDTISK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
K + RLRIGIG P + VLG + E+ + +D R L +L K
Sbjct: 126 LANTKEFYRLRIGIGHPGHKDKVAGFVLGKAPTKEQELIDAAVDESTRCLDILLK 180
>gi|13507960|ref|NP_109909.1| peptidyl-tRNA hydrolase [Mycoplasma pneumoniae M129]
gi|2499986|sp|P78034|PTH_MYCPN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|1674312|gb|AAB96258.1| peptidyl-tRNA hydrolase [Mycoplasma pneumoniae M129]
gi|301633118|gb|ADK86672.1| aminoacyl-tRNA hydrolase [Mycoplasma pneumoniae FH]
Length = 188
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 22/166 (13%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE----GQLDGLR--- 55
+V GLGN G +Y E RHN GF IDR+ S +H ++ E G+ LR
Sbjct: 6 LVVGLGNLGKQYAETRHNAGFKVIDRLLSL---------YHVQLEERNNLGEFILLRKHK 56
Query: 56 TILIKPQTFMNLSGQSL-LEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
+L KP T+MN SG+ + N+ P + +V++D+L GT+RLK G HNG
Sbjct: 57 VVLAKPNTYMNHSGKFVKWACQNWNIKP--DKVMVVYDELAFPLGTVRLKMQGSANNHNG 114
Query: 115 LKS-ISEKCGKNYKRLRIGIGRPPDTAHIIRH-VLGNFSSPERYFL 158
+KS I+ +++ RLR GI + +T++I+ V+ F+ ER L
Sbjct: 115 IKSVIAHLNTEHFNRLRFGI-KSDNTSNILHEVVMSEFTPAERNLL 159
>gi|38233496|ref|NP_939263.1| peptidyl-tRNA hydrolase [Corynebacterium diphtheriae NCTC 13129]
gi|68052966|sp|Q6NI78|PTH_CORDI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|38199756|emb|CAE49416.1| Putative peptidyl tRNA hydrolase [Corynebacterium diphtheriae]
Length = 184
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 86/130 (66%), Gaps = 6/130 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAW---KKKFHAEISEGQLDGLRTI 57
+++ GLGN G EY + RHNIG+M ID + + PA KK + ++E +L + I
Sbjct: 5 YLIVGLGNLGPEYTKTRHNIGYMAIDELLTRTSPMPATLTVHKKTNTLVAETRLGTQKVI 64
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
+ KP+ FMN++G S+ ++ +F+ + + +V++DDLDL+FG ++ + GGGD GHNGLKS
Sbjct: 65 VAKPRAFMNVTGPSVRKLADFFTV-DRNRIVVLYDDLDLEFGAIKFRHGGGDHGHNGLKS 123
Query: 118 ISEKCG-KNY 126
I++ G K+Y
Sbjct: 124 ITQALGTKDY 133
>gi|255634128|gb|ACU17427.1| unknown [Glycine max]
Length = 179
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG++Y RHN+GF ID + + A I G + + +L KP
Sbjct: 50 WLIIGLGNPGNKYHGTRHNVGFEIIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLAKP 109
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
QT+MN SG+S+ + +Y++P L + L++ D+ L G LRL+ GG HNGLK++
Sbjct: 110 QTYMNFSGESVGPLAAYYQVP-LRHILLVFDETSLPNGVLRLQPNGGHGHHNGLKNV 165
>gi|312884090|ref|ZP_07743803.1| peptidyl-tRNA hydrolase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368260|gb|EFP95799.1| peptidyl-tRNA hydrolase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 196
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 86/175 (49%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G ++ + H KF +DG L+ P
Sbjct: 7 LLVGLANPGPEYTRTRHNAGAWVVEELARNHNVLLKNDSKFFGLTGRIMIDGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ + FY++ E ++ HD+LDL G + K GGG GHNGLK K
Sbjct: 67 TTYMNLSGKSVAAMAKFYQI-KPEEIMIAHDELDLPPGIAKFKKGGGHGGHNGLKDTISK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
K++ RLRIGIG P + VLG E+ L D R + +L K
Sbjct: 126 LANCKDFYRLRIGIGHPGHKDRVAGFVLGKAPEKEQALLDAATDESVRCIDILLK 180
>gi|294635776|ref|ZP_06714236.1| aminoacyl-tRNA hydrolase [Edwardsiella tarda ATCC 23685]
gi|291090876|gb|EFE23437.1| aminoacyl-tRNA hydrolase [Edwardsiella tarda ATCC 23685]
Length = 196
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + L G L+ P
Sbjct: 5 LIVGLANPGAEYAQTRHNAGAWFVDALAERHGQSLKDESKFFGYTARLNLAGHDLRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY + E LV HD+LDL G +LK GGG+ GHNGLK I K
Sbjct: 65 TTFMNLSGKAVSALAGFYHIAPDE-ILVAHDELDLPPGVAKLKLGGGNGGHNGLKDIQSK 123
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N+ RLRIGIG P D + ++ VLG + E+ + ID R +L +
Sbjct: 124 LGNNPNFYRLRIGIGHPGDKSKVVGFVLGKPLASEQPLIDEAIDEALRCTEVLMR 178
>gi|114626797|ref|XP_001150783.1| PREDICTED: similar to Peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae) isoform 3 [Pan troglodytes]
Length = 165
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 75/151 (49%), Gaps = 15/151 (9%)
Query: 37 AWKKKFH--AEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDL 94
+W + H A+++ L + +L++P+ MN +G+S+ + L E YLV HD+L
Sbjct: 16 SWTRDRHCAADLALAPLGDAQLVLLRPRRLMNANGRSVARAAELFGLTAEEVYLV-HDEL 74
Query: 95 DLDFGTLRLKTGGGDAGHNGLKSISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSP 153
D G L LK GG GHNG++S N RLR+GIGRP + HVLG FS
Sbjct: 75 DKPLGRLALKLGGSARGHNGVRSCISCLNSNAMPRLRVGIGRPAHPEAVQAHVLGCFSPA 134
Query: 154 ERYFLLPIIDNIARSLPLLAKREDVSFLNHI 184
E+ LPLL R L+HI
Sbjct: 135 EQEL-----------LPLLLDRATDLILDHI 154
>gi|329897178|ref|ZP_08271918.1| Peptidyl-tRNA hydrolase [gamma proteobacterium IMCC3088]
gi|328921333|gb|EGG28727.1| Peptidyl-tRNA hydrolase [gamma proteobacterium IMCC3088]
Length = 194
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y + RHN G ++ + + H WK K S+ + +L+
Sbjct: 5 LIVGLCNPGTQYDQTRHNAGSWFVESL-AKHHNGQWKSDAKLFGRTSKIVIGSHELLLLL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ +NFYKL + + LV+HD+LDL G R K GGG GHNGL+ I
Sbjct: 64 PDTFMNRSGKSVAAAVNFYKLQSTQ-VLVVHDELDLSPGIARFKDGGGHGGHNGLRDIIP 122
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G ++ RLRIGIG P + +VL ++ + II ++L + +
Sbjct: 123 ALGNKSDFLRLRIGIGHPGHAKAVSNYVLSKPDQGDKTAIEHIIHEAEQTLTYVLADDLA 182
Query: 179 SFLNHIVSV 187
+N + S+
Sbjct: 183 KAMNQLHSI 191
>gi|147676448|ref|YP_001210663.1| peptidyl-tRNA hydrolase [Pelotomaculum thermopropionicum SI]
gi|146272545|dbj|BAF58294.1| peptidyl-tRNA hydrolase [Pelotomaculum thermopropionicum SI]
Length = 165
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
M IDR+ K+ F A + +G++DG + +L KPQT+MNLSG+++ ++N+Y L
Sbjct: 1 MVIDRLAPALGITVGKRMFKALVGQGRIDGEKVVLAKPQTYMNLSGEAVGALLNWYGL-T 59
Query: 84 LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-KNYKRLRIGIGRPPD 138
+ +V++DDLDL G LRL+ GGG GH G++S+ G +N+ R+R+GIGRP +
Sbjct: 60 PADLIVVYDDLDLPPGKLRLRAGGGAGGHKGVQSVIRVLGTENFARVRVGIGRPAE 115
>gi|308233681|ref|ZP_07664418.1| peptidyl-tRNA hydrolase [Atopobium vaginae DSM 15829]
gi|328943607|ref|ZP_08241072.1| aminoacyl-tRNA hydrolase [Atopobium vaginae DSM 15829]
gi|327491576|gb|EGF23350.1| aminoacyl-tRNA hydrolase [Atopobium vaginae DSM 15829]
Length = 201
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 82/147 (55%), Gaps = 3/147 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG-QLDGLRTILIKP 61
+ GLGNPG EY HNIGF D + WK + ++ + DG + KP
Sbjct: 18 CIIGLGNPGAEYARTPHNIGFEACDALARNLHASYWKSQAGCLVAAAPRGDGSMVYIAKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q +MN SG + +++ KL + LV+HDD D+D G ++LK GGG GHNGL+S+++K
Sbjct: 78 QGYMNTSGGPVSKLLRELKL-TTRDMLVLHDDCDMDLGNVKLKWGGGLNGHNGLRSLAQK 136
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVL 147
++ RL+ GIGRP + +VL
Sbjct: 137 LQTSDFARLKCGIGRPSGRMSLATYVL 163
>gi|77460976|ref|YP_350483.1| peptidyl-tRNA hydrolase [Pseudomonas fluorescens Pf0-1]
gi|119390983|sp|Q3K6W2|PTH_PSEPF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|77384979|gb|ABA76492.1| peptidyl-tRNA hydrolase [Pseudomonas fluorescens Pf0-1]
Length = 194
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 90/171 (52%), Gaps = 4/171 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++RI H+ + +K+ G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGALFVERIAHAQNVNLVADRKYFGLTGRFSHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + F+++ E LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFFRI-KPEEILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G + RLR+GIG P + + VLG E+ L ID LP
Sbjct: 125 LGNQNTFHRLRLGIGHPGVASMVSNFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|27904680|ref|NP_777806.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|29611784|sp|P59490|PTH_BUCBP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|27904077|gb|AAO26911.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 207
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 86/160 (53%), Gaps = 5/160 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIKP 61
++ GL NP +Y + RHN+G ++ + + K F +E + ++ P
Sbjct: 6 LIVGLANPIKKYNDTRHNVGSWLVNSLVTQQNKKLKKNNKFLGYSTEINILSKNIHVLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG S+L + NFY + L LV+HD+LDL G ++ + GHNG++++
Sbjct: 66 DTFMNLSGISVLAISNFYNIK-LHEILVVHDELDLKPGNVKFRLRSSHNGHNGIRNVLAV 124
Query: 122 CGKNYK--RLRIGIGRPPDTAH-IIRHVLGNFSSPERYFL 158
G N K R++IGIGRP ++ + I + VL + E+ +
Sbjct: 125 LGTNIKFLRIQIGIGRPINSGYKISKFVLSKPNVSEKLLI 164
>gi|270159182|ref|ZP_06187838.1| peptidyl-tRNA hydrolase [Legionella longbeachae D-4968]
gi|269987521|gb|EEZ93776.1| peptidyl-tRNA hydrolase [Legionella longbeachae D-4968]
Length = 189
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 95/185 (51%), Gaps = 5/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG Y RHN G I + + F +KK AE+ + +L+ L P
Sbjct: 5 LIIGLRNPGPAYEHTRHNAGQWLISALAQRYSIFFKLEKKMQAELVDLELNQHLCKLALP 64
Query: 62 QTFMNLSGQSLLEVMNFYKL-PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMN SGQ + FY++ PN L++HD+LDL G ++LKTGGG GHNGL+ I
Sbjct: 65 TTFMNHSGQPTRLISQFYRIQPN--EILIVHDELDLPAGRIKLKTGGGHGGHNGLRDIIA 122
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + R+RIGIG P + + VL ++ ER ID +P + +
Sbjct: 123 QLGSAEFHRMRIGIGHPGHKDLVHQFVLSKPTAQERQLTYDAIDRGIAVMPFIFSGDFAK 182
Query: 180 FLNHI 184
+N +
Sbjct: 183 AMNQL 187
>gi|295698663|ref|YP_003603318.1| peptidyl-tRNA hydrolase [Candidatus Riesia pediculicola USDA]
gi|291157441|gb|ADD79886.1| peptidyl-tRNA hydrolase [Candidatus Riesia pediculicola USDA]
Length = 199
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 91/180 (50%), Gaps = 5/180 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++AGL NP Y RHN+G + + F KKF +I + + L+
Sbjct: 9 LIAGLSNP-KRYSGTRHNVGELFVKFFSKKFGNKLVQNKKFFGKIDKLSFLNSKVFLLVS 67
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+MN +G ++ NFY + + LV+HD+LDL G+LR+K GG GH G+ S+ EK
Sbjct: 68 DLYMNNNGIAISHFCNFYHICP-KKILVVHDELDLPPGSLRIKIGGSYNGHKGVLSVEEK 126
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + + RLRIGIGRP + VL NF L+ + N + S A ++D+ F
Sbjct: 127 LGSSEFYRLRIGIGRPYKNQKVSEFVL-NFPDRLDRELISLAINRSSSYLYSAIQKDICF 185
>gi|330811726|ref|YP_004356188.1| Aminoacyl-tRNA hydrolase (Peptidyl-tRNA hydrolase) [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327379834|gb|AEA71184.1| Aminoacyl-tRNA hydrolase (Peptidyl-tRNA hydrolase) [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 194
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 88/171 (51%), Gaps = 4/171 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++RI A +K+ G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGALFVERIAQAQGVSLAADRKYFGLTGRFSHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + F+++ E LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFFRI-KPEEILVAHDELDLPPGVAKLKQGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G + RLR+GIG P + + VLG E+ L ID LP
Sbjct: 125 LGNQNTFHRLRLGIGHPGVASMVSNFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|289165990|ref|YP_003456128.1| peptidyl-tRNA hydrolase [Legionella longbeachae NSW150]
gi|288859163|emb|CBJ13092.1| putative peptidyl-tRNA hydrolase [Legionella longbeachae NSW150]
Length = 189
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 91/173 (52%), Gaps = 5/173 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG Y RHN G I + + F +KK AE+ + +L+ L P
Sbjct: 5 LIIGLRNPGPAYEHTRHNAGQWLISALAQRYSIFFKLEKKMQAELVDLELNQHLYKLALP 64
Query: 62 QTFMNLSGQSLLEVMNFYKL-PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMN SGQ + FY++ PN L++HD+LDL G ++LKTGGG GHNGL+ I
Sbjct: 65 TTFMNHSGQPTRLISQFYRIQPN--EILIVHDELDLPAGRIKLKTGGGHGGHNGLRDIIA 122
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ G + R+RIGIG P + + VL ++ ER ID +P +
Sbjct: 123 QLGSAEFHRMRIGIGHPGHKDLVHQFVLSKPTAQERQLTYDAIDRGIAVMPFI 175
>gi|320582847|gb|EFW97064.1| peptidyl-tRNA hydrolase [Pichia angusta DL-1]
Length = 214
Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK----KFHAEISEGQLDGLRT 56
+ +V +GNP +Y RH++G + + + F K+ KF D
Sbjct: 26 LILVVSIGNPEAQYHGTRHSVGHLILKNLCESQGFSQIKQINGFKFRCNT-----DKPDV 80
Query: 57 ILIKPQTFMNLSGQSLLEVMN-FYKLPNLENYLVI-HDDLDLDFGTLRLKTGGGDA-GHN 113
+L + FMNLSG++L + P LV+ HD+LDLD G +R++ A GHN
Sbjct: 81 LLYQTPGFMNLSGKNLAKPWKALMAQPQWNPVLVVLHDELDLDLGKVRVRKQNSSARGHN 140
Query: 114 GLKSISEKCGKNYKRLRIGIG----RPPDTAHIIRHVLGNFSSPE 154
GLKSI + GK Y ++IGIG R D + R+VL FS+ E
Sbjct: 141 GLKSIQQHIGKGYNAIQIGIGRDSNREKDPDAVSRYVLSKFSAQE 185
>gi|192361428|ref|YP_001981163.1| peptidyl-tRNA hydrolase [Cellvibrio japonicus Ueda107]
gi|190687593|gb|ACE85271.1| peptidyl-tRNA hydrolase [Cellvibrio japonicus Ueda107]
Length = 247
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 87/173 (50%), Gaps = 8/173 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID---RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY RHN G ++ R P K+ + G L+
Sbjct: 58 LLVGLGNPGSEYERTRHNAGADLVELLARQLGATLVP--DSKYAGLTARVNYQGRDLRLL 115
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SGQS+ + NF+K+ E LV HD+LDL G+ R K GGG GHNGL+ I
Sbjct: 116 IPTTYMNRSGQSVGALANFFKIAP-EAILVAHDELDLPPGSARFKQGGGHGGHNGLRDII 174
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G N++RLR+GIG P D + VL + E+ + ID LP
Sbjct: 175 AALGNNNNFRRLRLGIGHPGDAKLVANFVLKRAPASEQELIDNAIDRAIACLP 227
>gi|323388151|gb|ADX60347.1| peptidyl-tRNA hydrolase [Pseudomonas fluorescens]
Length = 194
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 89/171 (52%), Gaps = 4/171 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++RI H+ +K+ G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGALFVERIAHAQGVNLVADRKYFGLTGRFSHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + F+++ E LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFFRI-KPEEILVAHDELDLPPGVAKLKQGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G + RLR+GIG P + + VLG E+ L ID LP
Sbjct: 125 LGNQNTFYRLRLGIGHPGVASMVSNFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|254362624|ref|ZP_04978713.1| aminoacyl-tRNA hydrolase [Mannheimia haemolytica PHL213]
gi|261492867|ref|ZP_05989413.1| aminoacyl-tRNA hydrolase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261496783|ref|ZP_05993158.1| aminoacyl-tRNA hydrolase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|153094238|gb|EDN75109.1| aminoacyl-tRNA hydrolase [Mannheimia haemolytica PHL213]
gi|261307622|gb|EEY08950.1| aminoacyl-tRNA hydrolase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311408|gb|EEY12565.1| aminoacyl-tRNA hydrolase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 195
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y E RHN G I+ + + ++ K+ ++++ L+ P
Sbjct: 6 LIVGLANPGVKYEETRHNAGEWLINELARIYNVSLKEEPKYFGKVAKINTAQGEVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY++ E LV HD+LDL G+++LK GGG GHNGLK I
Sbjct: 66 TTFMNLSGKAVGALANFYRI-KPEEILVAHDELDLPPGSVKLKKGGGHGGHNGLKDIIAA 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + R+RIGIG P + +VLG S ++ L +D AR + +L K V
Sbjct: 125 LGNNKEFYRVRIGIGHPGHKDLVANYVLGKPSPSDQTLLNSAVDEAARCVEVLFKDGMVK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 ATNRLNSFK 193
>gi|119390981|sp|Q4K688|PTH_PSEF5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 194
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 88/171 (51%), Gaps = 4/171 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++RI +K+ G L+ P
Sbjct: 6 LIVGLGNPGTEYEQTRHNAGALFVERIAEKQGINLVADRKYFGLTGRFSHQGQDIRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + F+++ E LV HD+LDL G +LKTGGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFFRI-KPEEILVAHDELDLPPGVAKLKTGGGHGGHNGLRDIIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G + RLR+GIG P + + VLG E+ L ID LP
Sbjct: 125 LGNQNTFHRLRLGIGHPGVASMVSNFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|224079331|ref|XP_002305824.1| predicted protein [Populus trichocarpa]
gi|222848788|gb|EEE86335.1| predicted protein [Populus trichocarpa]
Length = 161
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF IDRI + A I G + + +L KP
Sbjct: 50 WLIVGLGNPGTKYHGTRHNVGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAKP 109
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
Q +MN SG+S+ + YK+P L + L+I+D+++L G LR++ GG HNG
Sbjct: 110 QAYMNFSGESVGPLAAHYKIP-LRHILLIYDEMNLPNGILRVQPKGGHGHHNG 161
>gi|25091010|sp|Q8K9V3|PTH_BUCAP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|21623087|gb|AAM67749.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 177
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NP +Y + RHN+G I + ++ +KKF + L+ P
Sbjct: 1 MIVGLSNPKKKYHKTRHNVGSWYIYSLAKNYLSILKEEKKFFGFTGCLNIKSNFIRLLIP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMN++G S+ + +FY + +L L++HDDLDL G ++ K G +GHNGL+ I ++
Sbjct: 61 DIFMNINGFSVHRMASFYNI-SLNQILIVHDDLDLAPGIIKYKYSYGHSGHNGLRHIIKE 119
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLG 148
N+ RLRIGIGRP + I VL
Sbjct: 120 FNTKVNFYRLRIGIGRPKNKNEISSFVLS 148
>gi|70732482|ref|YP_262245.1| peptidyl-tRNA hydrolase [Pseudomonas fluorescens Pf-5]
gi|68346781|gb|AAY94387.1| peptidyl-tRNA hydrolase [Pseudomonas fluorescens Pf-5]
Length = 208
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 88/171 (51%), Gaps = 4/171 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++RI +K+ G L+ P
Sbjct: 20 LIVGLGNPGTEYEQTRHNAGALFVERIAEKQGINLVADRKYFGLTGRFSHQGQDIRLLIP 79
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + F+++ E LV HD+LDL G +LKTGGG GHNGL+ I +
Sbjct: 80 TTYMNRSGQAVAALAGFFRI-KPEEILVAHDELDLPPGVAKLKTGGGHGGHNGLRDIIAQ 138
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G + RLR+GIG P + + VLG E+ L ID LP
Sbjct: 139 LGNQNTFHRLRLGIGHPGVASMVSNFVLGRAPRAEQEKLDASIDFALGVLP 189
>gi|30410817|ref|NP_660538.2| peptidyl-tRNA hydrolase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 182
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NP +Y + RHN+G I + ++ +KKF + L+ P
Sbjct: 6 MIVGLSNPKKKYHKTRHNVGSWYIYSLAKNYLSILKEEKKFFGFTGCLNIKSNFIRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMN++G S+ + +FY + +L L++HDDLDL G ++ K G +GHNGL+ I ++
Sbjct: 66 DIFMNINGFSVHRMASFYNI-SLNQILIVHDDLDLAPGIIKYKYSYGHSGHNGLRHIIKE 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLG 148
N+ RLRIGIGRP + I VL
Sbjct: 125 FNTKVNFYRLRIGIGRPKNKNEISSFVLS 153
>gi|314922166|gb|EFS85997.1| putative peptidyl-tRNA hydrolase [Propionibacterium acnes HL001PA1]
gi|314965249|gb|EFT09348.1| putative peptidyl-tRNA hydrolase [Propionibacterium acnes HL082PA2]
gi|314982386|gb|EFT26479.1| putative peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA3]
gi|315094009|gb|EFT65985.1| putative peptidyl-tRNA hydrolase [Propionibacterium acnes HL060PA1]
gi|327329539|gb|EGE71299.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes HL103PA1]
Length = 136
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
Query: 51 LDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
+D IL++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LRLK GGGD
Sbjct: 1 MDAQTVILMRSRTYMNESGIAVSKVASFAGM-TPDHLIVVHDEIDLDPGRLRLKKGGGDN 59
Query: 111 GHNGLKSISE--KCGKNYKRLRIGIGRPP 137
GHNGLKS+ + G ++ R+R+G+GRPP
Sbjct: 60 GHNGLKSVRAHMRTG-DFIRVRVGVGRPP 87
>gi|33519805|ref|NP_878637.1| peptidyl-tRNA hydrolase [Candidatus Blochmannia floridanus]
gi|33504150|emb|CAD83412.1| peptidyl-tRNA hydrolase [Candidatus Blochmannia floridanus]
Length = 197
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 19/156 (12%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAE--------ISEGQLDGL 54
++AG+GN G +Y RHN G H + + + K K H + I + Q+
Sbjct: 5 LIAGIGNIGAKYINTRHNCG-------HKYIYLLSQKFKVHLKYNNILCGYIGKFQILEH 57
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGG-GDAGHN 113
L+ P +++N SG S+ + +NFY L L LV HD+LDL GT++++ G + H+
Sbjct: 58 TVKLLIPNSYVNNSGISVSKCVNFYGLS-LREILVAHDELDLYPGTIKIQLGKRRNESHH 116
Query: 114 GLKSISEKCGKNYK--RLRIGIGRPPDTAHIIRHVL 147
G+++I +K G Y RLRIGIGRP + II VL
Sbjct: 117 GIQNIIDKLGNRYDFYRLRIGIGRPCNKNEIINFVL 152
>gi|144513|gb|AAA23133.1| putative heat shock protein [Chlamydia muridarum]
Length = 168
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+LIKP T++NL+G+++L F+ + ++E L++ DD++ +FG++R + G GHNGLK
Sbjct: 33 VLIKPSTYVNLTGKAVLAAKRFFGV-SVEGILIVADDINREFGSIRFRQDCGAGGHNGLK 91
Query: 117 SISEKCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPER 155
+ ++ N Y +LR+G+GRP P++ +VL NFS ER
Sbjct: 92 NTTQVLQSNHYWQLRLGVGRPSNPESEGGADYVLSNFSFNER 133
>gi|299473500|emb|CBN77896.1| peptidyl-tRNA hydrolase [Ectocarpus siliculosus]
Length = 175
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 3/165 (1%)
Query: 17 NRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEV 75
RHN GF+ + + H K F E +++ +++P T+MN SG S +V
Sbjct: 2 TRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVRVNDKSVGILRPITYMNNSGMSARKV 61
Query: 76 MNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK-NYKRLRIGIG 134
M+F+KLP + +V+ D++ LDFG LRLK GG GHNGLKS+ Y RLRIG+G
Sbjct: 62 MDFFKLP-MNAAIVLVDEVALDFGQLRLKGKGGAGGHNGLKSLQAHLKTPEYTRLRIGVG 120
Query: 135 RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + HVLG F+ E+ L +I + ++ + ED++
Sbjct: 121 ASKFSEALSDHVLGEFTRTEKKELDNVIADACDAVEHWVEEEDMA 165
>gi|254282271|ref|ZP_04957239.1| peptidyl-tRNA hydrolase [gamma proteobacterium NOR51-B]
gi|219678474|gb|EED34823.1| peptidyl-tRNA hydrolase [gamma proteobacterium NOR51-B]
Length = 198
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 101/191 (52%), Gaps = 8/191 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTILI 59
++ GLGNPG EY RHN G + + + P + KF + + G ++GL +
Sbjct: 6 LIVGLGNPGSEYEGTRHNAGAFFVHALANRAGCRLSP--ESKFFGDTASGTINGLPLRFL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMN SG+++ + +F+K+ N E L+ HD+LD+ G R K GGG GHNGL+ I
Sbjct: 64 IPTTFMNRSGKAVAAMAHFFKI-NPEEILIAHDELDIPPGQARFKHGGGHGGHNGLRDII 122
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G K++ RLR+GIG P + + +VL + +R + ID +LP L +
Sbjct: 123 PALGGSKDFYRLRVGIGHPGHASKVSGYVLRKPGAGDRDAIAASIDAAIEALPKLLAGDM 182
Query: 178 VSFLNHIVSVR 188
V + + S +
Sbjct: 183 VKAMTQLHSFQ 193
>gi|281204723|gb|EFA78918.1| Peptidyl-tRNA hydrolase [Polysphondylium pallidum PN500]
Length = 369
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
IL KP FMNLSG S+ + N Y +P + N L++ DD+ +D G ++L+T GG G NGL+
Sbjct: 240 ILAKPMKFMNLSGGSVRSLHNHYNVP-IGNILIMVDDMAVDLGKVKLRTKGGSGGQNGLE 298
Query: 117 SISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
I + G + + RLRIGIG P I +VL F + I ++ AR + +
Sbjct: 299 DIINRLGTEKFARLRIGIGSPRPGEDIASYVLRKFPLESVQQISMITEHAARVALMWLEC 358
Query: 176 EDVSFLNHI 184
+ V +NH+
Sbjct: 359 DTVFTMNHV 367
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI 29
++V GLGNPG EY RHNIGF+ ID++
Sbjct: 126 YLVVGLGNPGKEYQFTRHNIGFLAIDKL 153
>gi|118387769|ref|XP_001026987.1| hypothetical protein TTHERM_00689840 [Tetrahymena thermophila]
gi|89308757|gb|EAS06745.1| hypothetical protein TTHERM_00689840 [Tetrahymena thermophila
SB210]
Length = 182
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 88/164 (53%), Gaps = 32/164 (19%)
Query: 18 RHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGL-------RTILIKPQTFMNLSGQ 70
RHN+G + I ++ + F A KK I++G L L + L +MN+SG+
Sbjct: 2 RHNVGKLFIS--YTANKFNAQLKK----INQGYLAILNEDTNLPKIGLFNTYCYMNISGK 55
Query: 71 SLLEVM-------NFY---------KLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
S+ EV+ NFY K +EN +V+HDDLD FG +++K GG GHNG
Sbjct: 56 SISEVIKKHQVFQNFYLTLLLNKFEKKVKVENIIVVHDDLDNAFGKVKIKEGGSAEGHNG 115
Query: 115 LKSISEKC-GKNYKRLRIGIGRPP--DTAHIIRHVLGNFSSPER 155
LKSI E K + RL+IGI RP D I +VLGNFS+ ++
Sbjct: 116 LKSIIEYLDTKEFLRLKIGIDRPNSRDPIVISPYVLGNFSTDQQ 159
>gi|145531739|ref|XP_001451636.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419291|emb|CAK84239.1| unnamed protein product [Paramecium tetraurelia]
Length = 188
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 74/138 (53%), Gaps = 14/138 (10%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT----IL 58
++ GLGNPG+ Y RHN G F K+F ++S+G + + I+
Sbjct: 23 LIVGLGNPGNIYENTRHNAGQ---------QFVKHLAKEFGIKMSDGSNGSIGSFQHIIV 73
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
P +FMN SG ++ ++ + + N +++HDDL+ G ++K GG GHNGLKSI
Sbjct: 74 FNPLSFMNSSGHAIKKIADKANI-QTSNIIIVHDDLENLPGRCKIKQGGSAEGHNGLKSI 132
Query: 119 SEKCGKNYKRLRIGIGRP 136
+ + RL+IGIGRP
Sbjct: 133 IQYMDDKFIRLKIGIGRP 150
>gi|289667604|ref|ZP_06488679.1| peptidyl-tRNA hydrolase [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 152
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 41 KFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGT 100
K E ++ + G L+KP TFMNLSG+S+ + F+K+ E+ LV HD+LDL GT
Sbjct: 4 KLFGETAKVDIAGQPVWLLKPATFMNLSGKSVAAALRFWKI-EPEHLLVAHDELDLAPGT 62
Query: 101 LRLKTGGGDAGHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLG 148
RLK GG G NGL+ G + RLR+GIG P ++ VLG
Sbjct: 63 ARLKFDGGHGGQNGLRDTIRLLGHGKFHRLRVGIGHPGHKDRVVSWVLG 111
>gi|171910046|ref|ZP_02925516.1| peptidyl-tRNA hydrolase [Verrucomicrobium spinosum DSM 4136]
Length = 175
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
M +D + + F +W + + + + G L+KP T+MN SG+++ V FYK+
Sbjct: 1 MVVDAL-AGQFSASWGHEKRWDCALAKFSG--GWLLKPFTYMNASGEAVSSVCRFYKI-Q 56
Query: 84 LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-KNYKRLRIGI----GRPPD 138
E L ++DD+DL G++R + G AGHNG++S+ G + + RL++GI GRP
Sbjct: 57 PEEVLAVYDDVDLSLGSMRFRMNGRPAGHNGVRSLISHLGTEEFPRLKVGIAGEQGRPAG 116
Query: 139 TAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
++ HVLG FS E+ + + ++
Sbjct: 117 D-RMVGHVLGRFSEAEQPLVQTAVSRAVEAV 146
>gi|218708750|ref|YP_002416371.1| peptidyl-tRNA hydrolase [Vibrio splendidus LGP32]
gi|254783897|sp|B7VKG8|PTH_VIBSL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|218321769|emb|CAV17724.1| Peptidyl-tRNA hydrolase [Vibrio splendidus LGP32]
Length = 196
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 93/175 (53%), Gaps = 4/175 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + KF + G L+ P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARVHNVTLKNEPKFFGLTGRIMVHGEDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + FY++ E +V HD+LDL G + K GGG GHNGLK I K
Sbjct: 67 TTFMNLSGKAVAALAKFYQI-KPEEIMVAHDELDLPPGIGKFKKGGGHGGHNGLKDIISK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G N + RLR+GIG P + +VLG + E+ + ++D RSL +L K
Sbjct: 126 QGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECIEAVVDESVRSLDILLK 180
>gi|73540046|ref|YP_294566.1| peptidyl-tRNA hydrolase [Ralstonia eutropha JMP134]
gi|119390986|sp|Q476G1|PTH_RALEJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|72117459|gb|AAZ59722.1| peptidyl-tRNA hydrolase [Ralstonia eutropha JMP134]
Length = 199
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D++ + +FH +L L+KP
Sbjct: 4 LIVGLGNPGAEYEATRHNAGFWLVDQLARMGGTTLRVEGRFHGLAGRARLWDQDIWLLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMN SG +++ + FYK LP+ +V HD++DL G +LK GGG GHNGLK I+
Sbjct: 64 STFMNRSGLAVVSLARFYKILPD--EIVVAHDEMDLPPGAAKLKRGGGAGGHNGLKDIAA 121
Query: 121 K-CGKNYKRLRIGIGRP---PDTAHIIRHVLGNF--SSPERYFLLPIIDNIARSL 169
+ + RLR+G+G P P A R + NF P + I + I RS+
Sbjct: 122 HLTTQEFWRLRLGVGHPRNLPGGAGAGREDVVNFVLKPPRKEEQQAIDEAIDRSI 176
>gi|308379937|ref|ZP_07488154.2| putative aminoacyl-tRNA hydrolase [Mycobacterium tuberculosis
SUMu011]
gi|308363124|gb|EFP51975.1| putative aminoacyl-tRNA hydrolase [Mycobacterium tuberculosis
SUMu011]
Length = 130
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
+ KP+ +MN SG+ + + FY + N +VIHDDLDL+FG +RLK GGG+ GHNGL+S
Sbjct: 1 MAKPRCYMNESGRQIGPLAKFYSVAPA-NIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRS 59
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
+ G K+++R+RIGIGRPP VL NF+ ER + I + A + LL
Sbjct: 60 VVAALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELL 115
>gi|308799159|ref|XP_003074360.1| Peptidyl-tRNA hydrolase-like (ISS) [Ostreococcus tauri]
gi|116000531|emb|CAL50211.1| Peptidyl-tRNA hydrolase-like (ISS) [Ostreococcus tauri]
Length = 242
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ V GLGNPG ++ +HN+GF ID + S KK A + R +L+KP
Sbjct: 52 WAVFGLGNPGKKFDGTKHNVGFDVIDVLASALGVEVTAKKHAALVGTWASGDARAVLVKP 111
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ +M +K+P E++ D + R + H
Sbjct: 112 QTFMNLSGKSVRAIMRAHKIPKNESW---RDTAEGQRDARRAQR------HPEYHRRRHG 162
Query: 122 CGKNYKRLRIGIGRP-PDTAHIIRHVLGNF 150
G+++ R+++GIGRP D + +VL F
Sbjct: 163 RGQDFARVKVGIGRPKSDDVPVYEYVLSKF 192
>gi|213618786|ref|ZP_03372612.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 115
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L+G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHN
Sbjct: 65 TTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHN 115
>gi|294655226|ref|XP_457330.2| DEHA2B08602p [Debaryomyces hansenii CBS767]
gi|199429785|emb|CAG85334.2| DEHA2B08602p [Debaryomyces hansenii]
Length = 252
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 17/184 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG-----QLDGLRT 56
++A +GNP +Y RHN+G +D + + H+ + + H I +G +++ L
Sbjct: 47 LMIASIGNPEPQYQGTRHNVGHWALDELITNHWTSFNQFQNHKNIPDGVYSTSRVEDLSD 106
Query: 57 ILIKPQ--TFMNLSG----QSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
I + +FMNL G ++ +V N+ K +V+HD+L + FG +++ A
Sbjct: 107 IFLFKSIYSFMNLQGAPVSKTWQKVSNYQKATRSPALVVLHDELQVPFGKFQIRKQLSSA 166
Query: 111 -GHNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER----YFLLPIIDNI 165
GHNGL+SI G Y ++ IGIG+ P + +VL F+ E+ Y ++P I N+
Sbjct: 167 RGHNGLRSIDSLMGGGYTKISIGIGK-PTAKDLSNYVLSPFTPLEQEVLTYDVMPQIVNV 225
Query: 166 ARSL 169
+ +
Sbjct: 226 LQEM 229
>gi|33152133|ref|NP_873486.1| peptidyl-tRNA hydrolase [Haemophilus ducreyi 35000HP]
gi|33148355|gb|AAP95875.1| peptidyl-tRNA hydrolase [Haemophilus ducreyi 35000HP]
Length = 200
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 98/190 (51%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH--FFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y RHN G ++ + + K F ++G +LI
Sbjct: 12 LIVGLANPGAKYEGTRHNAGEWLVNELARMYNTSLKDEAKYFGKTAKINTVNGDVWLLI- 70
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ E L+ HD+LDL G +LK GGG GHNGLK I
Sbjct: 71 PTTFMNLSGKAVGALAHFFRI-KAEEILIAHDELDLPPGVAKLKQGGGHGGHNGLKDIIS 129
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N+ R+R+GIG P + +VL + ++ + +ID +R L +L K
Sbjct: 130 ALGNNNNFYRIRLGIGHPGHKDQVAGYVLSKPAPQDQQKINAVIDEASRCLEILFKDGVT 189
Query: 179 SFLNHIVSVR 188
S N + S +
Sbjct: 190 SATNRLNSFK 199
>gi|312958843|ref|ZP_07773362.1| Peptidyl-tRNA hydrolase [Pseudomonas fluorescens WH6]
gi|311286613|gb|EFQ65175.1| Peptidyl-tRNA hydrolase [Pseudomonas fluorescens WH6]
Length = 194
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++RI H+ A +K+ G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGALFVERIAHAQGVNLAADRKYFGLTGRFSHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + F+++ E LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFFRI-KPEEILVAHDELDLPPGVAKLKLGGGHGGHNGLRDIIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G N+ RLR+GIG P + + VLG E+ L ID LP
Sbjct: 125 LGNQNNFYRLRLGIGHPGVASMVSNFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|46576747|sp|Q7VMI1|PTH_HAEDU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 194
Score = 77.4 bits (189), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 98/190 (51%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH--FFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y RHN G ++ + + K F ++G +LI
Sbjct: 6 LIVGLANPGAKYEGTRHNAGEWLVNELARMYNTSLKDEAKYFGKTAKINTVNGDVWLLI- 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ E L+ HD+LDL G +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALAHFFRI-KAEEILIAHDELDLPPGVAKLKQGGGHGGHNGLKDIIS 123
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N+ R+R+GIG P + +VL + ++ + +ID +R L +L K
Sbjct: 124 ALGNNNNFYRIRLGIGHPGHKDQVAGYVLSKPAPQDQQKINAVIDEASRCLEILFKDGVT 183
Query: 179 SFLNHIVSVR 188
S N + S +
Sbjct: 184 SATNRLNSFK 193
>gi|229588276|ref|YP_002870395.1| peptidyl-tRNA hydrolase [Pseudomonas fluorescens SBW25]
gi|259535229|sp|C3KCR9|PTH_PSEFS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|229360142|emb|CAY46999.1| peptidyl-tRNA hydrolase [Pseudomonas fluorescens SBW25]
Length = 194
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++RI H+ +K+ G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGALFVERIAHAQGINLVADRKYFGLTGRFSHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + F+++ E LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFFRI-KPEEILVAHDELDLPPGVAKLKLGGGHGGHNGLRDIIAQ 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G N+ RLR+GIG P + + VLG E+ L ID + LP
Sbjct: 125 LGNQNNFYRLRLGIGHPGVASMVSNFVLGRAPRAEQEKLDASIDFVLGVLP 175
>gi|255716448|ref|XP_002554505.1| KLTH0F06930p [Lachancea thermotolerans]
gi|238935888|emb|CAR24068.1| KLTH0F06930p [Lachancea thermotolerans]
Length = 193
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 96/179 (53%), Gaps = 15/179 (8%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK----KFHAEISEGQLDGLRTILI 59
+ G+GNP +Y +RHN G + +D + P K + ++ + Q+D R +L+
Sbjct: 17 ITGIGNPEPQYAMSRHNAGLLMLDLLKQ-QLQPERKAYVPCNANPKVKKCQID--RLLLL 73
Query: 60 KPQ-TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA-GHNGLKS 117
+ ++NLSG++++ + ++KL + ++V+HD+L L G ++L+ G GHNGLK
Sbjct: 74 RADGDYINLSGRTVVPL--WHKLGSNVKHVVVHDELSLPVGKVQLRNPGASVRGHNGLKD 131
Query: 118 ISEKCGKNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
I + G + RL IGIGRP D + +VL F P + D++ +L LL K
Sbjct: 132 IKTRYGDAFYRLAIGIGRPDDRDPNVVANYVLSRF--PPHELAVIESDSLVLALRLLQK 188
>gi|296415249|ref|XP_002837304.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633165|emb|CAZ81495.1| unnamed protein product [Tuber melanosporum]
Length = 188
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 13/168 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK--FHAEISEGQLDGLRTILI 59
+V +GNPG +Y RH+ G + + FP ++K + +S G D T+
Sbjct: 6 ILVCSIGNPG-QYLNTRHSAGHTLSNLLQGTLAFPPFRKSASYGGNVSMGGFDSTYTLFQ 64
Query: 60 KPQTFMNLSGQSLLEVMNFY--KLPNLEN----YLVIHDDLDLDFGTLRLKTGGGDAGHN 113
P + MN+SG+S+ + + +L E +V+HD+L+ G +++K GG GHN
Sbjct: 65 SP-SLMNVSGKSVKKAWKAFMAELSEEEKKNALLVVLHDELEAAPGRVKVKKGGSAKGHN 123
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFL 158
G+ S E G K++ R+ IGIGRP D + +VLG +S E+ L
Sbjct: 124 GIVSCVESLGSKDFCRIGIGIGRPDSRDRETVSGYVLGKMTSHEKDTL 171
>gi|242220553|ref|XP_002476041.1| predicted protein [Postia placenta Mad-698-R]
gi|220724729|gb|EED78752.1| predicted protein [Postia placenta Mad-698-R]
Length = 184
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD---GLRTI- 57
F++AGLGN Y RH++G + +D + + + + + D G + +
Sbjct: 3 FLLAGLGN--SPYPLTRHSVGHLIVDSLATRLGISLRADRSTRGLLATKADVDIGSQIVT 60
Query: 58 --LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
L KP+ MN+SG+ + + M F + E +VIHD L ++ K GG GHNG+
Sbjct: 61 LTLYKPKALMNISGKPVADAMRFLSVSPSET-IVIHDSLSHKPMSMSPKFGGSANGHNGV 119
Query: 116 KSISEKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLP 160
+SI G N + RLR GIGR D + R+VLG S ER F P
Sbjct: 120 RSIVSALGNNMDFHRLRAGIGR--DESDAARYVLGPLSPAEREFWGP 164
>gi|307718727|ref|YP_003874259.1| peptidyl-tRNA hydrolase [Spirochaeta thermophila DSM 6192]
gi|306532452|gb|ADN01986.1| peptidyl-tRNA hydrolase [Spirochaeta thermophila DSM 6192]
Length = 164
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 26 IDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVM-NFYKLPNL 84
++RI S H +K+K + G + G +LIKP T+MN SG ++ + LP
Sbjct: 1 MERIASTHLHAPFKEKALWAEARGTIKGREVVLIKPLTYMNRSGAIFSHLLVDRTWLP-- 58
Query: 85 ENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHII 143
+ +V+ D +DL G RL+ GGG AGHNGLKSI + G ++ R +G+GRPP+ +
Sbjct: 59 RHLVVVCDQVDLTPGNGRLRIGGGHAGHNGLKSIIQHLGSPHFVRYYVGVGRPPEGEDLA 118
Query: 144 RHVL 147
+VL
Sbjct: 119 DYVL 122
>gi|254576859|ref|XP_002494416.1| ZYRO0A00946p [Zygosaccharomyces rouxii]
gi|238937305|emb|CAR25483.1| ZYRO0A00946p [Zygosaccharomyces rouxii]
Length = 191
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 15/161 (9%)
Query: 5 AGLGNPGHEYCENRHNIGFMCID----RIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
G+GNP +Y RHN+G + +D R + P +K + Q+ ++
Sbjct: 12 TGIGNPEPKYAGTRHNVGLIILDLLKNRFDAEQIHP-YKVSSLSPAKYCQISSQLVMIRS 70
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLE--NYLVIHDDLDLDFGTLRL-KTGGGDAGHNGLKS 117
+MNLSG++++ + N +LP+ + ++V+HD+L L G ++L K G GHNGLKS
Sbjct: 71 DGDYMNLSGKTVVPMWN--RLPHRDHVTHVVLHDELSLPLGKVQLRKPGTSLRGHNGLKS 128
Query: 118 ISEKCGK--NYKRLRIGIGRPP--DTAHIIRHVLGNFSSPE 154
I + C + N+ RL +GIGRPP D+ + +VL F E
Sbjct: 129 I-QNCWRNDNFYRLSVGIGRPPQRDSTVVSDYVLSKFDERE 168
>gi|114330910|ref|YP_747132.1| peptidyl-tRNA hydrolase [Nitrosomonas eutropha C91]
gi|114307924|gb|ABI59167.1| peptidyl-tRNA hydrolase [Nitrosomonas eutropha C91]
Length = 630
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 98/180 (54%), Gaps = 17/180 (9%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG E+ HNIG+ +D++ + + W+ + + + L+G+ +L K
Sbjct: 447 VIVGLGNPGKEFENTLHNIGYSVLDKL-AVDYGGIWQNEEEGQTAWIILNGVSVVLFKSD 505
Query: 63 TFMNLSGQSLLEVMNFY-KLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+MN +G L + +LP E+ L+I+DD+D++FGT++ K GGD GH GL+S
Sbjct: 506 AYMNKTGLRLKHYLARTGRLP--EHCLLIYDDMDIEFGTIKFKPDGGDGGHLGLRS---- 559
Query: 122 CGKNYK-----RLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN----IARSLPLL 172
C K+ + RLR G+ P +TA VL F+ E L I+D + +++P L
Sbjct: 560 CLKSLRIYTLPRLRCGVRSPGNTAKAKEQVLAKFNKKELEQLPQILDQAVDMVIKTIPQL 619
>gi|315185671|gb|EFU19439.1| Aminoacyl-tRNA hydrolase [Spirochaeta thermophila DSM 6578]
Length = 164
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 26 IDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVM-NFYKLPNL 84
++RI S H +K+K + G + G +LIKP T+MN SG ++ + LP
Sbjct: 1 MERIASTHLHAPFKEKALWAEARGTIKGREVVLIKPLTYMNRSGAIFSHLLVDRTWLP-- 58
Query: 85 ENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHII 143
+ +V+ D +DL G RL+ GGG AGHNGLKSI + G ++ R +G+GRPP+ +
Sbjct: 59 WHLVVVCDQVDLTPGNGRLRIGGGHAGHNGLKSIIQHLGSPDFVRYYVGVGRPPEGEDLA 118
Query: 144 RHVL 147
+VL
Sbjct: 119 DYVL 122
>gi|196229513|ref|ZP_03128378.1| Aminoacyl-tRNA hydrolase [Chthoniobacter flavus Ellin428]
gi|196226745|gb|EDY21250.1| Aminoacyl-tRNA hydrolase [Chthoniobacter flavus Ellin428]
Length = 157
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 39 KKKFHAEIS-EGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLD 97
+K + AE++ G L +L KP T+MNLSGQ++ + FYK+ LVI DD+ L
Sbjct: 17 EKSWQAEVARSGDL-----LLCKPLTYMNLSGQAVRPLSQFYKI-EPSQVLVILDDMALP 70
Query: 98 FGTLRLKTGGGDAGHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G LR +T G GHNGL S+ E G RLRIGIG ++ HVLG F+ E+
Sbjct: 71 LGKLRFRTNGSAGGHNGLASVIEHFGTPAVPRLRIGIGGA--ERGVVDHVLGRFALEEQ 127
>gi|213582444|ref|ZP_03364270.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 175
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 84/160 (52%), Gaps = 4/160 (2%)
Query: 18 RHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVM 76
RHN G +D + P ++ KF S L+G L+ P TFMNLSG+++ +
Sbjct: 1 RHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMA 60
Query: 77 NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK--NYKRLRIGIG 134
+FY++ + LV HD+LDL G + K GGG GHNGLK I K G N+ RLR+GIG
Sbjct: 61 SFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIG 119
Query: 135 RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
P D ++ VLG E+ + ID AR L K
Sbjct: 120 HPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFK 159
>gi|66814068|ref|XP_641213.1| hypothetical protein DDB_G0280507 [Dictyostelium discoideum AX4]
gi|60469238|gb|EAL67233.1| hypothetical protein DDB_G0280507 [Dictyostelium discoideum AX4]
Length = 452
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
+ IL+KP T+MN SG L + Y +P L+N LV+ DD+ D G ++++T GG AG G
Sbjct: 321 QVILLKPMTYMNASGNPLRTIQQKYNVP-LQNILVLVDDISTDIGVIKMRTKGGSAGQKG 379
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRH--VLGNFSSPERYFLLPIIDNIAR-SLP 170
++S+ + G + + R++ G+G P A IR VL FS + + L ID +R S+
Sbjct: 380 IESVISRLGTEKFSRIKFGVGVP--NAGEIRSNFVLKKFSREKEHLLKESIDKASRYSIM 437
Query: 171 LLAKREDVSF 180
L K D +
Sbjct: 438 WLEKGSDFTM 447
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 19/26 (73%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID 27
+I+ GLGNPG EY RHNIGF ID
Sbjct: 166 YIIVGLGNPGTEYVNTRHNIGFSAID 191
>gi|169835714|ref|ZP_02868902.1| peptidyl-tRNA hydrolase [candidate division TM7 single-cell
isolate TM7a]
Length = 99
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW--KKKFHAEISEGQLDGLRTIL 58
M I+ GNPG++Y + RHNIG+M ID++ A+ K KF A I+E L+G + +L
Sbjct: 1 MKIIFAQGNPGNQYEKTRHNIGWMIIDKLAK-QLNAAFIHKPKFSASIAESSLNGEKILL 59
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDF 98
+KP TF N +G S +++FYK+ N ++ LV+HDD + F
Sbjct: 60 VKPLTFYNDTGVSARALIDFYKI-NTKDILVLHDDFNDRF 98
>gi|319760477|ref|YP_004124415.1| peptidyl-tRNA hydrolase [Candidatus Blochmannia vafer str. BVAF]
gi|318039191|gb|ADV33741.1| peptidyl-tRNA hydrolase [Candidatus Blochmannia vafer str. BVAF]
Length = 194
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 20/165 (12%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE------GQLDGLRT 56
++ G+GN G EY RH+IG H + K K + ++ + G L ++
Sbjct: 5 LIVGIGNIGAEYINTRHSIG-------HRYIHMLTKKYKVNLKLDKILSGFIGSLTICKS 57
Query: 57 ILIK---PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGG-DAGH 112
+ ++ P +++N SG ++ + M Y+L +L+ LV+HD+LDL G +R+K G H
Sbjct: 58 MTVQLLIPNSYINESGLAVYKYMKLYRL-DLKELLVVHDELDLSPGMIRIKLGNKLYESH 116
Query: 113 NGLKSISEKCGKNY--KRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G+++I Y RLRIGIGRP + I+ VL + S E+
Sbjct: 117 RGIQNIINNLSNQYGFYRLRIGIGRPKNKNEIVNFVLSSPSIHEK 161
>gi|68464699|ref|XP_723427.1| hypothetical protein CaO19.4740 [Candida albicans SC5314]
gi|68465074|ref|XP_723236.1| hypothetical protein CaO19.12202 [Candida albicans SC5314]
gi|46445262|gb|EAL04531.1| hypothetical protein CaO19.12202 [Candida albicans SC5314]
gi|46445460|gb|EAL04728.1| hypothetical protein CaO19.4740 [Candida albicans SC5314]
Length = 210
Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 86/165 (52%), Gaps = 12/165 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+A +GNP +Y RHN G ++++ ++ KK +S + +L K
Sbjct: 24 LFIASIGNPEPQYANTRHNAGHRLMNQLIDVYWKDHVYKKGPYYLSTKYSN---LVLFKS 80
Query: 62 Q-TFMNLSGQSLLEVMNFYKLPNLENYLVI-HDDLDLDFGTLRL-KTGGGDAGHNGLKSI 118
+ MNL G + + +F K ++ LV+ HD+L +D G ++ K G GHNGLKSI
Sbjct: 81 NDSLMNLQGLPISK--HFGKHDQGKSALVVLHDELQVDLGKYQIRKPGTSSRGHNGLKSI 138
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+ Y +L IGIGRPP + ++ +VL NFSS E L +ID
Sbjct: 139 DKYLKNRYFKLGIGIGRPPASQSVVHYVLKNFSSQE----LDVID 179
>gi|207110550|ref|ZP_03244712.1| peptidyl-tRNA hydrolase [Helicobacter pylori HPKX_438_CA4C1]
Length = 98
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 56/79 (70%), Gaps = 3/79 (3%)
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
I +KPQT+MNLSG+S+L NFYK L L++HDDLDL G +R K GGG+ GHNGLK
Sbjct: 20 IFLKPQTYMNLSGESVLSAKNFYKTKEL---LIVHDDLDLPLGVVRFKNGGGNGGHNGLK 76
Query: 117 SISEKCGKNYKRLRIGIGR 135
SI C +Y RLR+GI +
Sbjct: 77 SIDLLCSNSYYRLRVGISK 95
>gi|304415230|ref|ZP_07395936.1| peptidyl-tRNA hydrolase [Candidatus Regiella insecticola LSR1]
gi|304282919|gb|EFL91376.1| peptidyl-tRNA hydrolase [Candidatus Regiella insecticola LSR1]
Length = 197
Score = 74.3 bits (181), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 5/190 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y E RHN G ++ + + K K ++ ++ L+ P
Sbjct: 6 LIVGLANPGSQYAETRHNAGAWFVENLAKRYNQSLQKNSKLLGYTAQIKIVNHEIRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ + NFY E LV+HD+LD G + K GGG+ GHNGLK +K
Sbjct: 66 TTFMNLSGNAVKAMTNFYHFL-AEEILVVHDELDFLPGVAKFKFGGGNGGHNGLKRYPKK 124
Query: 122 ---CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
N+ RLRIGIG P + + ++ VL E+ + ID R L+ K
Sbjct: 125 KLDNNANFHRLRIGIGHPGERSKVMDFVLSPPPLSEKKRIDDAIDESLRCTELIFKENMA 184
Query: 179 SFLNHIVSVR 188
+ + ++ S R
Sbjct: 185 TAIQNLHSFR 194
>gi|150863914|ref|XP_001382560.2| hypothetical protein PICST_30021 [Scheffersomyces stipitis CBS
6054]
gi|149385170|gb|ABN64531.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 214
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILI- 59
+ +A +GNP +Y +HNIG +D++ + WK + + I++
Sbjct: 25 LLFIASIGNPEPKYEGTKHNIGHRMLDQLVDIY----WKDHLVKDGPYYRSTKYSNIVLF 80
Query: 60 -KPQTFMNLSGQSLLEVMNFYKLPNLENYLVI-HDDLDLDFGTLRL-KTGGGDAGHNGLK 116
+ MNL G++ V Y+ ++ LVI HD+L + G ++ K GHNGLK
Sbjct: 81 KSNDSLMNLQGKA---VSKHYRQFQKDSQLVILHDELQVPVGKYQIRKPSTSPRGHNGLK 137
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
SI++ NY ++ IGIGRP D H++ +V+ F E
Sbjct: 138 SINQHLPNNYTKVAIGIGRPSDKRHVVDYVMSKFKDSE 175
>gi|307102711|gb|EFN50980.1| hypothetical protein CHLNCDRAFT_141630 [Chlorella variabilis]
Length = 238
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 51/82 (62%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+++V GLGNPG Y RHN+GFM +D++ + + A + G+ G + +L+K
Sbjct: 42 LWMVCGLGNPGPRYESTRHNVGFMAVDQLARQEGIAVNRLQETAVVGRGRFAGKKVLLVK 101
Query: 61 PQTFMNLSGQSLLEVMNFYKLP 82
P TFMN+SG+++ + FY++P
Sbjct: 102 PMTFMNVSGEAVGRLARFYRVP 123
>gi|254468539|ref|ZP_05081945.1| peptidyl-tRNA hydrolase [beta proteobacterium KB13]
gi|207087349|gb|EDZ64632.1| peptidyl-tRNA hydrolase [beta proteobacterium KB13]
Length = 191
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 6 GLGNPGHEYCENRHNIGF----MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTI-LIK 60
GLGNPG EY RHN+GF + + I + F+ +I++ L I L+
Sbjct: 9 GLGNPGSEYEATRHNVGFWFNHLIANNIKQTLDENSKFLGFYKKIAD-----LENIHLLN 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG S+ +++NFYK E L+IHD+LDL G +RLK GGG GHNGLKSI
Sbjct: 64 PATFMNESGLSVAKIVNFYKFKPHE-ILIIHDELDLMPGDIRLKNGGGHGGHNGLKSIIA 122
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVL 147
G N + RLRIGIG P D + +VL
Sbjct: 123 NIGTNAFWRLRIGIGHPGDKNKVKSYVL 150
>gi|255728023|ref|XP_002548937.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133253|gb|EER32809.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 214
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 82/178 (46%), Gaps = 10/178 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+A +GNP EY RHN G ++ + H+ KK +S + IL K
Sbjct: 25 LFIASIGNPEPEYQGTRHNAGHRLMNSLIEVHWKDHVYKKGDYYLSSKYPN---LILYKS 81
Query: 62 -QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLK-TGGGDAGHNGLKSIS 119
+ MN G+ L + YK L +V+HD+L D G +++ G GHNGLKSI
Sbjct: 82 NDSLMNRQGRFLRRHIAHYKDTKL---VVLHDELQRDVGKFQIRGPGTSSRGHNGLKSID 138
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL-LPIIDNIARSLPLLAKRE 176
+ G Y +L IGIGR P T ++ +V+ F E L + AR L L E
Sbjct: 139 KHVGGKYTKLGIGIGR-PQTKSVVDYVMEEFQPQEAEILDWEVFPKCARELQKLVDEE 195
>gi|295442870|ref|NP_596234.2| peptidyl-tRNA hydrolase Pth1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|259016322|sp|O74806|PTH_SCHPO RecName: Full=Probable peptidyl-tRNA hydrolase; Short=PTH
gi|254745601|emb|CAA21173.2| peptidyl-tRNA hydrolase Pth1 (predicted) [Schizosaccharomyces
pombe]
Length = 206
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 18/160 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
I+ GLGNPG + ++RH++G + + FP ++ L+
Sbjct: 32 IIYGLGNPGSAFVKSRHSLGKLMVSMYADSMAFPKNWPSTKENLT----------LVLST 81
Query: 63 TFMNLSGQSLLEVMNFY--KLPNLEN--YLVIHDDLDLDFGTLRLKT-GGGDAGHNGLKS 117
++MN SG+ L ++ N + K+ L+ Y+V+HD+L+LD G ++L+ GG GHNG++S
Sbjct: 82 SYMNDSGKQLKKISNDFVRKVSPLDKIVYVVVHDELELDLGKVKLRLPGGSHRGHNGIRS 141
Query: 118 ISEKCGK-NYKRLRIGIGR--PPDTAHIIRHVLGNFSSPE 154
E GK ++ R+ +GIGR + + +VL F+S E
Sbjct: 142 CQEFLGKESFYRIGLGIGRCESRNREDVSDYVLSKFNSNE 181
>gi|323261010|gb|EGA44605.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
Length = 112
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L+G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGG 108
TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG
Sbjct: 65 TTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGG 110
>gi|149247454|ref|XP_001528139.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448093|gb|EDK42481.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 224
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 11/152 (7%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILI--KP 61
+A +GNP Y RHN+G +D I + + WK + + I++
Sbjct: 43 IASIGNPEPSYAGTRHNVGHRVMDHITNNY----WKDHVYKQGPFYLSTKYPNIVLFKSD 98
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA-GHNGLKSISE 120
TFMN+ G+ + + +F + P LV+HD+L+ G +L+ G + GHNGLKSI
Sbjct: 99 STFMNIQGRVIQK--HFNQHPKGSQMLVLHDELERPLGKFQLRQAGTSSRGHNGLKSIDG 156
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSS 152
C K+Y++L IGIG+ P + + +VL F S
Sbjct: 157 FC-KSYQKLGIGIGK-PTSGSVSDYVLKKFDS 186
>gi|148825325|ref|YP_001290078.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittEE]
gi|148715485|gb|ABQ97695.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittEE]
Length = 163
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Query: 39 KKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDF 98
+ KF + + ++G L+ P TFMNLSG+++ + +FY++ E LVIHD+LDL
Sbjct: 12 ESKFFGKTARTLVNGKEVRLLVPTTFMNLSGKAVGALASFYRI-KPEEILVIHDELDLPA 70
Query: 99 GTLRLKTGGGDAGHNGLKSISEKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERY 156
GT +LK GGG GHNGLK I + G N+ RLRIGIG P + +VL S +R
Sbjct: 71 GTAKLKQGGGHGGHNGLKDIVAQLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRD 130
Query: 157 FLLPIIDNIARSLPLLAKREDVSFLNHIVSVR 188
L ++D + ++ K + N + S +
Sbjct: 131 ALEKVLDEATDCVEIIFKDGMIKATNRLNSFK 162
>gi|294671342|ref|ZP_06736193.1| hypothetical protein NEIELOOT_03051 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291306974|gb|EFE48217.1| hypothetical protein NEIELOOT_03051 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 129
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG+++ + FYK+ E LV HD+LD+ G +R K GGG+ GHNGLK I
Sbjct: 1 MKPDTYMNLSGKAVAALAQFYKI-RPEEILVAHDELDIPCGQIRFKLGGGNGGHNGLKDI 59
Query: 119 SEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
K G ++ RLR+GIG P D ++ +VL S+ +R + I+ + LPL+
Sbjct: 60 QAKFGTPDFYRLRLGIGHPGDRNLVVGYVLNKPSAEDRALIDKAIEKSLQGLPLI 114
>gi|114626793|ref|XP_001150584.1| PREDICTED: similar to Peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae) isoform 1 [Pan troglodytes]
Length = 183
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFH--AEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W + H A+++ L + +L
Sbjct: 31 WMVAGLGNPG--LPGTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 88
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
++P+ MN +G+S+ + L E YLV HD+LD G L LK GG GHNG++S
Sbjct: 89 LRPRRLMNANGRSVARAAELFGLTAEEVYLV-HDELDKPLGRLALKLGGSARGHNGVRS 146
>gi|328772280|gb|EGF82318.1| hypothetical protein BATDEDRAFT_86574 [Batrachochytrium
dendrobatidis JAM81]
Length = 222
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 55 RTI-LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
RTI L+KP MN+SG S+L+ + L + ++IHDD+D FGT+ LKTGG GHN
Sbjct: 94 RTITLLKPAALMNISGISVLKAIKKLHL-KPSDCIIIHDDIDRKFGTISLKTGGSANGHN 152
Query: 114 GLKSI-SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G+KS+ S + RLR+G+GRP + AH+ R VL F S E+ L
Sbjct: 153 GIKSVMSSMASDAFLRLRVGVGRPENKAHVARFVLEPFDSIEQVAL 198
>gi|90657669|gb|ABD96967.1| hypothetical protein [Cleome spinosa]
Length = 257
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 18/170 (10%)
Query: 2 FIVAGLGNPGHEYCENRHNI----GFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLR 55
+++ GLGNPG+++ RHN+ + S + +++ KF A S G ++ +
Sbjct: 50 WLIVGLGNPGNKFHGTRHNVRNNRPLLLNSGFASSTCWVLYQQCLKF-AAFSTGAIEEVP 108
Query: 56 TILIKPQTFMNLSG-------QSLLEVMNFYKLPNLENYL-VIHDDLDLDFGTLRLKTGG 107
+L KPQT+MN SG S E +F P+L + +I+D++ L G L+L G
Sbjct: 109 VLLAKPQTYMNFSGWISRCTLSSAFET-HFAGKPHLVPHCSLIYDEMSLPNGVLKLIPKG 167
Query: 108 GDAGHNGLKSISEKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G HNGLKS+ +++ RL IGIG+PP + +L FS ER
Sbjct: 168 GYGHHNGLKSVIGNLNGRRHFPRLCIGIGKPPGMMDLKAFLLQKFSPVER 217
>gi|269219242|ref|ZP_06163096.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269211389|gb|EEZ77729.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 168
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L +MN SG + ++ ++K+ +N +VIHD+LDL FGT+RLK GGG+ GHNG
Sbjct: 36 RAVLSVTTRYMNESGGPVAALLGYFKIAP-QNLIVIHDELDLPFGTIRLKRGGGEGGHNG 94
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
LKSI++ G K Y RLR GIGRPP VL F+S + L +I A ++
Sbjct: 95 LKSITQALGTKEYIRLRFGIGRPPGRQDPADFVLSPFASSQTKELPLLISEAADAV 150
>gi|260591410|ref|ZP_05856868.1| aminoacyl-tRNA hydrolase [Prevotella veroralis F0319]
gi|260536602|gb|EEX19219.1| aminoacyl-tRNA hydrolase [Prevotella veroralis F0319]
Length = 165
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Query: 37 AWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDL 96
++ K + I+E + G + IL+KP TFMNLSG ++ +N + LVI DD+ L
Sbjct: 13 VFEDKRYGFIAETTIKGRKIILLKPTTFMNLSGNAVRYWLNKENIDQ-SRLLVISDDVAL 71
Query: 97 DFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERY 156
G RLK G + GHNGL I + G+NY RLR+G+G I VLG++S E
Sbjct: 72 PLGAFRLKGNGSNGGHNGLGHIQQLIGQNYARLRMGVGNDYPRGGQIDWVLGHYSEDEMK 131
Query: 157 FLLPIID 163
L P ID
Sbjct: 132 VLQPAID 138
>gi|115465271|ref|NP_001056235.1| Os05g0549600 [Oryza sativa Japonica Group]
gi|113579786|dbj|BAF18149.1| Os05g0549600 [Oryza sativa Japonica Group]
Length = 128
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 70 QSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE--KCGKNYK 127
Q + ++++++K+P L LVI+DDLD+ F LRL GG GHNG++SI K +++
Sbjct: 2 QVVAQLVSYFKIP-LSQVLVIYDDLDIPFAKLRLLPKGGHGGHNGMRSIINHLKQSRDFP 60
Query: 128 RLRIGIGRPPDTAHIIRHVLGNFSSPER 155
RLRIGIGRP I VL +F+ E+
Sbjct: 61 RLRIGIGRPTGKLDAIGFVLRSFTKEEQ 88
>gi|147791610|emb|CAN77398.1| hypothetical protein VITISV_043931 [Vitis vinifera]
Length = 301
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 49/163 (30%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG++Y E RHNI +C+ S G + + +L KP
Sbjct: 52 WLIVGLGNPGNKYHETRHNI--ICV-------------------TSTGSIGEVPILLAKP 90
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG------L 115
Q +MN SG+S ++D+++L G LRL GG HNG L
Sbjct: 91 QAYMNFSGES------------------VYDEMNLPNGVLRLAPRGGHGYHNGYIYNNTL 132
Query: 116 KSIS---EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
K++ + C + + RL IGIG PP T + ++L FS ER
Sbjct: 133 KNVMGHLDGC-REFPRLCIGIGNPPGTMDMKAYLLQKFSFEER 174
>gi|156836054|ref|XP_001642267.1| hypothetical protein Kpol_237p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156112750|gb|EDO14409.1| hypothetical protein Kpol_237p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 192
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 21/188 (11%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF----FPAWKKKFHAEISEGQLDGLRTI 57
I+ G+GNP +Y RHN+G I+++ + K+ + E G R +
Sbjct: 1 MILFGIGNP-VKYKGTRHNVGKYIIEQLRRELCPNIEYKKGKRYEYVECDGGDTRSERLV 59
Query: 58 LIKP-QTFMNLSGQSLLEVMNFY--KLPNLENYLVIHDDLDLDFGTLRLKTGG-GDAGHN 113
L + TFMN SG S+ E + +L+ +V+HD+L+L G ++++ GG + GHN
Sbjct: 60 LCRSVDTFMNHSGLSIKEYLRGRHGGAGSLQRMVVVHDELELSIGKIKMRDGGSSNRGHN 119
Query: 114 GLKSISEKCGKNYKRLRIGIGRPPDTAH---------IIRHVLGNFSSPERYFLLPIIDN 164
GLKS+ + G K L IGIGRP + ++ +VL S ER + +
Sbjct: 120 GLKSVYGEVGPVTK-LGIGIGRPSRSVSAGKGGGDDDVVEYVLSEMSETERRIIRE--ET 176
Query: 165 IARSLPLL 172
+ R L LL
Sbjct: 177 VPRVLMLL 184
>gi|317968636|ref|ZP_07970026.1| peptidyl-tRNA hydrolase [Synechococcus sp. CB0205]
Length = 184
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 22/169 (13%)
Query: 13 EYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSL 72
E R N F ++H+ AE+ +G R L+ PQT+MN SG+S+
Sbjct: 4 EQLAKRQNSSFKQQSKLHALA----------AEVGQG---AERLRLLMPQTYMNDSGRSI 50
Query: 73 LEVMNFYKL-PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS-ISEKCGKNYKRLR 130
++++ PN L++ DD+DL G LRL+ GG GHNGL+S I+ G+ + RLR
Sbjct: 51 RAALDWFGFEPN--QMLILVDDMDLPLGRLRLRLSGGAGGHNGLRSTIAHLGGQEFPRLR 108
Query: 131 IGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
IGIG P + HVLG F+ E+ L +ID + L L+ +
Sbjct: 109 IGIGAPALNPVERKQRTVGHVLGRFAVAEQPVLEEVIDEVLAGLDLIQR 157
>gi|294655063|ref|XP_457140.2| DEHA2B04114p [Debaryomyces hansenii CBS767]
gi|199429661|emb|CAG85134.2| DEHA2B04114p [Debaryomyces hansenii]
Length = 210
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 26/196 (13%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
FI+ +GNPG NRH+ G + + I F +K ++ S ++D + L+K
Sbjct: 9 FIIFSIGNPG---STNRHSTGHIVMKALIEYFGAKQLFKPSSNSMYSMTEVDNIA--LVK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYL-VIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+MN S +SL + + K+ + L V++D+ DLD G +++ + HNG++SI
Sbjct: 64 SNNYMNDSNKSLKQYIEQEKIGLRQAVLIVVYDEFDLDLGKVKISPFKKNESHNGIRSIK 123
Query: 120 EKCGKNYK-----RLRIGIGRPPD---TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
E + +L IGIG P T+ + VL NF ER IIDN+ S+PL
Sbjct: 124 EYISRQSADSTVYKLGIGIGPKPSNATTSTMSSWVLSNFKPDER----QIIDNL--SIPL 177
Query: 172 LAKREDVSFLNHIVSV 187
+ +++H++ V
Sbjct: 178 A-----IDYIDHVIDV 188
>gi|257894169|ref|ZP_05673822.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,408]
gi|257830548|gb|EEV57155.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,408]
Length = 122
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK 124
MN SG+++ +M ++ + E +VI+DDLDL G +RL+ G GHNG+KSI
Sbjct: 1 MNESGRAVGPLMTYFGI-YPEELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIISHLNT 59
Query: 125 N-YKRLRIGIGRPPDTAHIIRHVLGNFS 151
N + R+++GIGRP +++HVL FS
Sbjct: 60 NVFDRIKVGIGRPEGKKTVVQHVLSPFS 87
>gi|237750265|ref|ZP_04580745.1| predicted protein [Helicobacter bilis ATCC 43879]
gi|229374159|gb|EEO24550.1| predicted protein [Helicobacter bilis ATCC 43879]
Length = 472
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+ I P TFMN SG +L + K N+ +VI+DDLD FG L + GG GHNGLK
Sbjct: 149 LCIAPTTFMNRSGIALQSI---EKKCNIAQMIVIYDDLDTRFGNLSFRYKGGSGGHNGLK 205
Query: 117 SISEKCGKNYKRLRIGIG 134
SI E ++Y R+++GIG
Sbjct: 206 SIHEYVKRDYLRVKLGIG 223
>gi|156622394|emb|CAO98817.1| mitochondrial peptidyl-tRNA hydrolase [Nakaseomyces delphensis]
Length = 183
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 19/180 (10%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEI---SEGQLDGLRTIL 58
+ + G+GNP Y RHNIG +DR+ P + + + GQ +R+ +
Sbjct: 11 WCLTGIGNPEPRYRGTRHNIGLYVLDRLKDT-LAPGGQYTRQGCVHVYTSGQFTFIRSDI 69
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLEN---YLVIHDDLDLDFGTLRLKT-GGGDAGHNG 114
++NLSG S+ ++ KL E+ ++V+HD+L L G ++L+ GHNG
Sbjct: 70 ----DYINLSGPSIRP--SWQKLLQNEHDTEFIVVHDELSLPLGKVQLRDHKTSHRGHNG 123
Query: 115 LKSISEKCGKNYKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LKSI +K+L IGIGRP D + +VL + E L I ++IA++L L+
Sbjct: 124 LKSILHHVHIPFKKLSIGIGRPQTTDPQQVADYVLSKTTDQE---LRSIDNSIAKALQLI 180
>gi|71892123|ref|YP_277855.1| peptidyl-tRNA hydrolase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
gi|71796229|gb|AAZ40980.1| peptidyl-tRNA hydrolase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 197
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++AGLGN Y RHN G + + + + + + +L L+ P
Sbjct: 5 LIAGLGNSETSYFNTRHNFGARYVKSLATRYKVILSKNTILCGYVGRLKLATNIVHLLIP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGG-DAGHNGLKSISE 120
+ MN +G S+ + ++FY+L E L+ HDDLDL G +R+K G + H G+K +
Sbjct: 65 DSNMNNNGLSISKCVDFYQLCPQE-ILIAHDDLDLPPGVMRIKLGKNINNSHRGVKDVIV 123
Query: 121 KCGKNYK--RLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K Y RLRIGIG P + + +I VL + E+Y + +I+ + ++ +
Sbjct: 124 KLHNKYDFYRLRIGIGHPGNKSKVIGFVLNKPTIYEKYKINRVINEAILHTESIVNKKFI 183
Query: 179 SFLNHIVS 186
+N + S
Sbjct: 184 EVMNQLHS 191
>gi|241949511|ref|XP_002417478.1| peptidyl-tRNA hydrolase, putative [Candida dubliniensis CD36]
gi|223640816|emb|CAX45131.1| peptidyl-tRNA hydrolase, putative [Candida dubliniensis CD36]
Length = 210
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 30/174 (17%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK- 60
+A +GNP +Y RHN G ++++ + WK + + GL + K
Sbjct: 24 LFIASIGNPEPQYANTRHNAGHRLMNQLIDVY----WKDHLYKK-------GLYYLSTKY 72
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENY----------LVIHDDLDLDFGTLRL-KTGGGD 109
P + S SL MN LP +++ +++HD+L + G ++ K G
Sbjct: 73 PNLVLFKSNDSL---MNLQGLPISKHFTKQGYGKSALVILHDELQIHLGKYQIRKPGTSS 129
Query: 110 AGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
GHNGLKSI + Y + IGIGRPP + ++++VL FS + L +ID
Sbjct: 130 RGHNGLKSIDKYLKNKYFKFGIGIGRPPASQSVVQYVLNEFSVED----LKVID 179
>gi|50294488|ref|XP_449655.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528969|emb|CAG62631.1| unnamed protein product [Candida glabrata]
Length = 196
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 87/180 (48%), Gaps = 16/180 (8%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILI---- 59
+ G+GNP Y RHN+G +D + P + H EG++ LRT I
Sbjct: 21 LTGIGNPEPSYKGTRHNVGLTVLDLLIK-QLVP---RDQHVFRREGKVHVLRTPTITFIR 76
Query: 60 KPQTFMNLSGQSLLEVMNFYKL-PNLENYLVIHDDLDLDFGTLRLKTGGGD-AGHNGLKS 117
FMNLSG+S++ + + KL + +Y VIHD+L L G L+L+ GHNGL+
Sbjct: 77 SDIGFMNLSGRSVVPM--WQKLYTDHTDYAVIHDELSLRTGALQLRQPQASLRGHNGLRD 134
Query: 118 ISEKCGKNYKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
IS Y +L IGI RP D + +VL P+R +++L LL ++
Sbjct: 135 ISAHWRHQYYKLAIGIDRPESRDPQAVADYVLSKV--PQRDATYIENTTTSKALELLQRQ 192
>gi|23009177|ref|ZP_00050323.1| COG0193: Peptidyl-tRNA hydrolase [Magnetospirillum magnetotacticum
MS-1]
Length = 101
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 111 GHNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
GHNGL+SI+ CG +Y+R+R+GIG P D A + +VL +F+ E ++ + A P
Sbjct: 1 GHNGLRSITALCGNDYRRVRLGIGHPGDKALVHAYVLNDFAKSEEPWVEDLCRATADHAP 60
Query: 171 LLAKREDVSFLNHI 184
LLA ED SF N +
Sbjct: 61 LLAAGEDASFQNKV 74
>gi|301095928|ref|XP_002897063.1| peptidyl-tRNA hydrolase, putative [Phytophthora infestans T30-4]
gi|262108492|gb|EEY66544.1| peptidyl-tRNA hydrolase, putative [Phytophthora infestans T30-4]
Length = 320
Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 65/218 (29%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCI------------------------------------ 26
++ GLGNPG++Y RHNIGF +
Sbjct: 52 LIVGLGNPGNKYTNTRHNIGFAAMRHFLETYASQVTGKNLELQHEAGNHGDVARFRVAFQ 111
Query: 27 ----DRIHSFHFFP----AWKKKFHAEISEG-QLDGLRTILIKPQTFMNLSGQSLLEVMN 77
D+ +SF + K+ + EG + + ++ P T+MN SG ++ M
Sbjct: 112 QNAADKDYSFPIDDLVNRSSKRAKERTLKEGVPHEEVNVAMLLPTTYMNCSGTAVRAFMQ 171
Query: 78 FYK---------LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-KNYK 127
++ L + LV+ DD+ L FG R K GG G NG++ I + G + +
Sbjct: 172 SHRWRLKKNPLSLNRQDELLVVTDDVALPFGECRFKAKGGPGGQNGVRDIIKCTGSERFA 231
Query: 128 RLRIGIGRP----------PDTAHIIRHVLGNFSSPER 155
RLRIG+G P P + ++VLG F+ E+
Sbjct: 232 RLRIGVGAPYWFAGGNSGAPSGTAMDKYVLGRFNGDEQ 269
>gi|309794295|ref|ZP_07688719.1| putative peptidyl-tRNA hydrolase [Escherichia coli MS 145-7]
gi|308122200|gb|EFO59462.1| putative peptidyl-tRNA hydrolase [Escherichia coli MS 145-7]
Length = 122
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 5 LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTG 106
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K G
Sbjct: 65 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLG 108
>gi|10802767|gb|AAG23605.1|AF244656_1 peptidyl-tRNA hydrolase [Carboxydothermus hydrogenoformans]
Length = 90
Score = 67.4 bits (163), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 17 NRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVM 76
RHN G + D + H K+KF + ++ G++ G+ +L+KPQT+MNLSG ++ E +
Sbjct: 2 TRHNAGLLVSDELGKKHGILITKRKFKSLVAAGEILGVXVLLLKPQTYMNLSGTAVQEAV 61
Query: 77 NFYKLPNLENYLVIHDDLDL 96
+F KLP L +V++DD DL
Sbjct: 62 SFNKLP-LSRLVVVYDDEDL 80
>gi|323333207|gb|EGA74606.1| Pth1p [Saccharomyces cerevisiae AWRI796]
Length = 190
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI--------HSFHFFPAWKKKFHAEISEGQLDG 53
++ G+GNP +Y RHN+G ++ + ++ P K H E
Sbjct: 7 LVLTGIGNPESQYAGTRHNVGLYMLELLRKRLGLQGRTYSPVPNTGGKVHYIEDEHC--- 63
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGD-AGH 112
TIL +MNLSG+ + +V Y ++VIHD+L + G ++L+ GH
Sbjct: 64 --TILRSDGQYMNLSGEQVCKVWARYA-KYQARHVVIHDELSVACGKVQLRAPSTSIRGH 120
Query: 113 NGLKSISEKCGKN--YKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLL 159
NGL+S+ + G + +L IGIGR P D A + R VLG + E LL
Sbjct: 121 NGLRSLLKCSGGRVPFAKLAIGIGREPGSRSRDPASVSRWVLGALTPQELQTLL 174
>gi|45198963|ref|NP_985992.1| AFR445Cp [Ashbya gossypii ATCC 10895]
gi|44985038|gb|AAS53816.1| AFR445Cp [Ashbya gossypii ATCC 10895]
Length = 199
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA--WKKKFHAEISEGQLDGLR---T 56
+ GLGNP +Y RHN G + +D + + H+ P W ++ R
Sbjct: 17 LCLTGLGNPEPQYRNTRHNAGLILLDLLKA-HYAPGKPWMPCTVPRVAASYCHASRHDLL 75
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGG-GDAGHNGL 115
+L FMN SGQ+ V+ ++ +V+HD+L L G ++L+ G GHNGL
Sbjct: 76 LLRSDGAFMNRSGQN---VVPLWQRIGGATRVVVHDELSLPLGKVQLRAPGRSPRGHNGL 132
Query: 116 KS-ISEKCGKNYKRLRIGIGRPP--DTAHIIRHVLGNFSSPE 154
KS I+ Y L +GI RP A I +VL FS E
Sbjct: 133 KSIIAAGAQGTYYSLAVGIDRPETRKPAAIADYVLSRFSRAE 174
>gi|225549826|ref|ZP_03770789.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 118a]
gi|225369583|gb|EEG99033.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 118a]
Length = 95
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ RHN+GF +D+I S + F KKK+ E SE ++ R IL+K
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIVSKNGLFLKRKKKY--EYSELKMISGRVILVK 60
Query: 61 PQTFMNLSGQSLLEVM-NFYKLPNLENYLVIHDDLDL 96
P T+MNLSG + +FY ++N LV+ D++DL
Sbjct: 61 PLTYMNLSGSLFPSIFSDFYMC--IKNLLVVLDNVDL 95
>gi|164661699|ref|XP_001731972.1| hypothetical protein MGL_1240 [Malassezia globosa CBS 7966]
gi|159105873|gb|EDP44758.1| hypothetical protein MGL_1240 [Malassezia globosa CBS 7966]
Length = 281
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ MN++G + + Y LE+ +++HD+L FG + K GG AGHNG++S+ +
Sbjct: 143 PRVLMNVNGTGVASALRMYPDVTLEHAILVHDELQRPFGKVAFKAGGSAAGHNGVRSVQQ 202
Query: 121 --KCG------KNYKRLRIGIGRPPDTAHII-RHVLG 148
+C + R+RIGI RP D +H + +VLG
Sbjct: 203 VLRCSGRSMNQPDIARIRIGIDRPQDPSHDVGAYVLG 239
>gi|6321983|ref|NP_012059.1| Pth1p [Saccharomyces cerevisiae S288c]
gi|731759|sp|P38876|PTH_YEAST RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|458935|gb|AAB68361.1| Yhr189wp [Saccharomyces cerevisiae]
gi|151944133|gb|EDN62426.1| peptidyl-tRNA hydrolase [Saccharomyces cerevisiae YJM789]
gi|190405964|gb|EDV09231.1| peptidyl-tRNA hydrolase [Saccharomyces cerevisiae RM11-1a]
gi|256271508|gb|EEU06556.1| Pth1p [Saccharomyces cerevisiae JAY291]
gi|259146948|emb|CAY80204.1| Pth1p [Saccharomyces cerevisiae EC1118]
gi|285810094|tpg|DAA06881.1| TPA: Pth1p [Saccharomyces cerevisiae S288c]
gi|323308713|gb|EGA61952.1| Pth1p [Saccharomyces cerevisiae FostersO]
gi|323337372|gb|EGA78625.1| Pth1p [Saccharomyces cerevisiae Vin13]
gi|323348205|gb|EGA82455.1| Pth1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354714|gb|EGA86549.1| Pth1p [Saccharomyces cerevisiae VL3]
Length = 190
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI--------HSFHFFPAWKKKFHAEISEGQLDG 53
++ G+GNP +Y RHN+G ++ + ++ P K H E
Sbjct: 7 LVLTGIGNPEPQYAGTRHNVGLYMLELLRKRLGLQGRTYSPVPNTGGKVHYIEDEHC--- 63
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGD-AGH 112
TIL +MNLSG+ + +V Y ++VIHD+L + G ++L+ GH
Sbjct: 64 --TILRSDGQYMNLSGEQVCKVWARYA-KYQARHVVIHDELSVACGKVQLRAPSTSIRGH 120
Query: 113 NGLKSISEKCGKN--YKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLL 159
NGL+S+ + G + +L IGIGR P D A + R VLG + E LL
Sbjct: 121 NGLRSLLKCSGGRVPFAKLAIGIGREPGSRSRDPASVSRWVLGALTPQELQTLL 174
>gi|325181965|emb|CCA16419.1| peptidyltRNA hydrolase putative [Albugo laibachii Nc14]
Length = 306
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 59/212 (27%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK--------------------- 41
++ GLGNP +Y + RHNIG + H + +
Sbjct: 47 VLVGLGNPTEKYVDTRHNIGKRALTHFLKSHVSSSVNRSLQMLHDPSVHGDVIQAAIGYT 106
Query: 42 -----------FHAEISEGQLDG-------LRTILIKPQTFMNLSGQSLLEVMNFYK--- 80
F +E S + ++ L+ P T+MN SG+S+ ++ ++
Sbjct: 107 AEDSAGYDLVDFFSERSRAKTAATGVPHPTVQLTLLAPTTYMNASGKSVRGFLSHHRWRL 166
Query: 81 ------LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN-YKRLRIGI 133
L + LV+ D++ L FGT+RLK+ G G NG+K + + G + + RL+IG+
Sbjct: 167 KRNPLSLNFQDEMLVLSDEVSLPFGTIRLKSRGSSGGQNGVKDVIQCVGTDRFARLKIGV 226
Query: 134 GR----------PPDTAHIIRHVLGNFSSPER 155
G PP + ++VL F+S E+
Sbjct: 227 GASQWFTNGNTGPPSHFPLDKYVLSRFNSSEQ 258
>gi|330988613|gb|EGH86716.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 148
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+ P T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+
Sbjct: 16 LLIPTTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRD 74
Query: 118 ISEKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
I + G + RLR+GIG P D + + VLG E+ L ID LP
Sbjct: 75 IIAQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLP 129
>gi|289829005|ref|ZP_06546705.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
Length = 149
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 41 KFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGT 100
KF S L+G L+ P TFMNLSG+++ + +FY++ + LV HD+LDL G
Sbjct: 31 KFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGV 89
Query: 101 LRLKTGGGDAGHNGLKSISEKCGK--NYKRLRIGIGRPPDTAHIIRHVLG 148
+ K GGG GHNGLK I K G N+ RLR+GIG P D ++ VLG
Sbjct: 90 AKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLG 139
>gi|300120944|emb|CBK21186.2| unnamed protein product [Blastocystis hominis]
Length = 285
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 87/215 (40%), Gaps = 57/215 (26%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-------AWKKK---------FHAEI 46
++ GLGN G EY RHN+GF + + + + P WK + I
Sbjct: 15 LIVGLGNMGSEYHRTRHNVGFG-VCKTFASEYLPNMNSDDVEWKWRVAKSCKCSLLQTTI 73
Query: 47 SEGQLDGLRTILIK--------------------------PQTFMNLSGQS--LLEVMNF 78
Q L L+ P T+MN SGQS L N
Sbjct: 74 HFSQNSSLGLDLVDHVSDRACQKTVTNGVPFPNIQLSMSLPLTYMNNSGQSVVLFSKQNN 133
Query: 79 YKLP------NLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYK--RLR 130
Y+L N++ L++HDD+ + FG +R GG G NG+KSI KC K RLR
Sbjct: 134 YRLKAPSSKNNMDEILIVHDDISIPFGEIRFSPKGGSGGQNGVKSI-LKCMATEKIPRLR 192
Query: 131 IGIGRPPDTAHI---IRHVLGNFSSPERYFLLPII 162
+GIG + R+V+G + + L +I
Sbjct: 193 VGIGASAGEGPMRADARYVIGRWDCTQLNILPYVI 227
>gi|290998726|ref|XP_002681931.1| predicted protein [Naegleria gruberi]
gi|284095557|gb|EFC49187.1| predicted protein [Naegleria gruberi]
Length = 270
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 63/115 (54%), Gaps = 13/115 (11%)
Query: 61 PQTFMNLSGQSLLEV--MNFYKLPNLENY---LVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
P +FMNLSG + + MN K+ LE+ LVI DD+ FGT +LK G GHNGL
Sbjct: 136 PLSFMNLSGGPVKKYLDMNGMKINQLEDVNRILVITDDVSQPFGTFKLKAKGTHGGHNGL 195
Query: 116 KSISEKCGKN-YKRLRIGIG--RPPDTAH-----IIRHVLGNFSSPERYFLLPII 162
+ I K G + Y RL++GI + PD A + VLGNF+ E+ L ++
Sbjct: 196 RDIEAKLGTDKYHRLKVGIAPLKNPDMAKQAGQDLASFVLGNFTHEEQKDLPKVV 250
Score = 39.7 bits (91), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK 40
++ GLGNPG +Y RHNIG+M ++ + FPA ++
Sbjct: 9 LVLIGLGNPGDKYKLTRHNIGWMIVNEFIKEYSFPALRE 47
>gi|330932252|ref|XP_003303710.1| hypothetical protein PTT_16032 [Pyrenophora teres f. teres 0-1]
gi|311320132|gb|EFQ88208.1| hypothetical protein PTT_16032 [Pyrenophora teres f. teres 0-1]
Length = 385
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 31/204 (15%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG-------QLDGL 54
+VA +GNPG Y H+ G + + + + + K ++S G
Sbjct: 179 LLVASIGNPGATYSNTLHSAGHIVTSALSTAKSYAPFTKGLSGQVSRPPPTHLAFSFTGF 238
Query: 55 RTI-----------LIKPQTFMNLSGQSLLEVMNFY----KLPNLENYL-----VIHDDL 94
R + + + MN+SG + + N + + + N L V+HD+L
Sbjct: 239 RHVPTEHDATQDWTFWQSTSLMNVSGTGVKKAYNEWLRGIRQASGSNTLEGRLVVVHDEL 298
Query: 95 DLDFGTLRLKTGGGDA-GHNGLKSISEKCGK-NYKRLRIGIGRPP--DTAHIIRHVLGNF 150
+ G + ++ GG A GHNG+KS ++ G + R+ +GIGRP D + ++VLG
Sbjct: 299 ESALGKITIRDGGASAKGHNGIKSCQQQLGGIKWWRVGVGIGRPESRDPNVVSKYVLGKM 358
Query: 151 SSPERYFLLPIIDNIARSLPLLAK 174
+S +R L + R+L +A+
Sbjct: 359 TSFQRGALEKCTVPVYRALEEIAE 382
>gi|302680080|ref|XP_003029722.1| hypothetical protein SCHCODRAFT_16804 [Schizophyllum commune H4-8]
gi|300103412|gb|EFI94819.1| hypothetical protein SCHCODRAFT_16804 [Schizophyllum commune H4-8]
Length = 188
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 90/181 (49%), Gaps = 12/181 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF--PAWKKKF--HAEISEGQLDGLRTI 57
+AGLG+ H RH++G + +D + + + + F +S G G+ T
Sbjct: 9 LFIAGLGSMTHPAT--RHSVGQIIVDGLAARLGIRVESCRNGFVGTGRMSLGDNTGMVT- 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L K + MNLSG ++ M + + E +V+ D LD + +L +K GG GHNG+KS
Sbjct: 66 LYKTKFPMNLSGPPIVAKMQELNMRDPERLIVVQDSLDHEPLSLSVKKGGSANGHNGVKS 125
Query: 118 ISEKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER-YFLLPIIDNIARSLPLLAK 174
G N+ RLR GIGR I +VLG S+ ER Y+ ID + ++ +A+
Sbjct: 126 TIAALGGKSNFWRLRAGIGR--SGGDIPNYVLGRLSNHERTYWREEGIDEVIAAIERIAE 183
Query: 175 R 175
+
Sbjct: 184 K 184
>gi|323304651|gb|EGA58414.1| Pth1p [Saccharomyces cerevisiae FostersB]
Length = 190
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 22/174 (12%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI--------HSFHFFPAWKKKFHAEISEGQLDG 53
++ G+GNP +Y RHN+G ++ + ++ P K H E
Sbjct: 7 LVLTGIGNPEPQYAGTRHNVGLYMLELLRKRLGLQGRTYSPVPNTGGKVHYIEDEHC--- 63
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGD-AGH 112
TIL +MNLSG+ + +V Y ++VIHD+L + G ++ + GH
Sbjct: 64 --TILRSDGQYMNLSGEQVCKVWARYA-KYQARHVVIHDELSVACGKVQXRAPSTSIRGH 120
Query: 113 NGLKSISEKCGKN--YKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLL 159
NGL+S+ + G + +L IGIGR P D A + R VLG + E LL
Sbjct: 121 NGLRSLLKCSGGRVPFAKLAIGIGREPGSRSRDPASVSRWVLGALTPQELQTLL 174
>gi|315179411|gb|ADT86325.1| peptidyl-tRNA hydrolase [Vibrio furnissii NCTC 11218]
Length = 147
Score = 64.3 bits (155), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + KF ++G L+ P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARIHNVVLKNEPKFFGLTGRIMVNGDDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLK 104
TFMNLSG+++ + FY++ N E +V HD+LDL G + K
Sbjct: 67 TTFMNLSGKAVGALAKFYQI-NPEEIMVAHDELDLPPGVAKFK 108
>gi|59711370|ref|YP_204146.1| peptidyl-tRNA hydrolase [Vibrio fischeri ES114]
gi|59479471|gb|AAW85258.1| peptidyl-tRNA hydrolase [Vibrio fischeri ES114]
Length = 156
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Query: 52 DGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG 111
D LR L+ P TFMNLSG+++ + FY++ E LV HD+LDL G + K GGG G
Sbjct: 19 DDLR--LLIPTTFMNLSGKAIAAMAKFYQI-KPEEILVAHDELDLPPGVAKFKKGGGHGG 75
Query: 112 HNGLKSISEKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
HNGL+ K K + RLRIGIG P + VLG + E+ + +D R L
Sbjct: 76 HNGLRDTISKLANTKEFYRLRIGIGHPGHKDKVAGFVLGKAPTKEQELIDAAVDESTRCL 135
Query: 170 PLLAK 174
+L K
Sbjct: 136 DILLK 140
>gi|170092511|ref|XP_001877477.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647336|gb|EDR11580.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 184
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 34/185 (18%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILI---- 59
+AGLGN H RH++G + +D + S + G G +LI
Sbjct: 10 IAGLGNISHPIT--RHSVGQLIVDALAS-------RLGISMSSERGGFRGRSDVLIGDTP 60
Query: 60 ------KPQTFMNLSGQSLLEVMNFYKLPNL-ENYLVIHDDLDLDFGTLRLKTGGGDAGH 112
K ++FMN+SG S+ + K N + +VI D L L +K GG GH
Sbjct: 61 VNLTLYKSKSFMNISGPSI--AAEYRKSVNSPSSMIVITDSLSHRVEALSVKLGGSANGH 118
Query: 113 NGLKSISEKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYF--------LLPII 162
NG+KSI G + + R R+GIGR D +VL SS ER++ +L I
Sbjct: 119 NGVKSIISALGGDLGFYRFRVGIGR--DDTDAATYVLQRLSSHERWYWTEDGLDLILTEI 176
Query: 163 DNIAR 167
+ +AR
Sbjct: 177 EKVAR 181
>gi|260772285|ref|ZP_05881201.1| peptidyl-tRNA hydrolase [Vibrio metschnikovii CIP 69.14]
gi|260611424|gb|EEX36627.1| peptidyl-tRNA hydrolase [Vibrio metschnikovii CIP 69.14]
Length = 161
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+ P T+MNLSG+++ + FY++ E ++ HD+LDL G + K GGG GHNGLK
Sbjct: 28 LLIPTTYMNLSGKAVAALAKFYQIKP-EEIMIAHDELDLPPGVAKFKQGGGHGGHNGLKD 86
Query: 118 ISEKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
K G N + RLRIGIG P + +VL + E +L +D R L +L K
Sbjct: 87 TISKLGNNKEFYRLRIGIGHPGHKDKVAGYVLSKAPNKEHECILAAVDESVRCLDILLK 145
>gi|328872200|gb|EGG20567.1| Peptidyl-tRNA hydrolase [Dictyostelium fasciculatum]
Length = 419
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
IL+KP +MNLSG + + + + +P +EN L++ DD L+ G +RL+ G G NG+
Sbjct: 283 ILVKPMKYMNLSGGVVRAMRSQFDVP-IENILIMVDDTHLELGFVRLRGKGSAGGQNGMA 341
Query: 117 SISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNF 150
I ++ G + RLRIG+G + HVL F
Sbjct: 342 DIIKRLGTDKVSRLRIGVGHQYPGGSLATHVLSKF 376
Score = 39.3 bits (90), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI 29
F++ GLGNP E+ RHN+GF+ +D++
Sbjct: 149 FMIVGLGNPDKEHLTTRHNMGFLAVDQL 176
>gi|312221149|emb|CBY01090.1| similar to peptidyl-tRNA hydrolase 2 [Leptosphaeria maculans]
Length = 328
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 31/188 (16%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE-----------GQ 50
++A +GNPG Y H+ G + + + + + K F IS+ G
Sbjct: 122 LLIASIGNPGPTYSNTLHSAGHIVTSHLATKKNYRPFTKGFSGLISQPDTSHYSFSVIGG 181
Query: 51 LDGLRTILIKP-----------QTFMNLSGQSLLEV-MNFYKLPNLEN----YLVIHDDL 94
+R P + MN+SG +L + + +L+ +V+HD+L
Sbjct: 182 YTKVRDGAAPPPEDEDWTFWQSTSLMNISGIALKRAYTQWVQTKSLKREEARLVVVHDEL 241
Query: 95 DLDFGTLRLKTGGGDA-GHNGLKSISEKCGK-NYKRLRIGIGRPP--DTAHIIRHVLGNF 150
+ + G + +K G A GHNG+KS ++ G + R+ +GIGRP D + R+VLG
Sbjct: 242 ESELGKVTVKLGAASAKGHNGIKSCQQQLGSMKWWRVGVGIGRPESRDPQVVSRYVLGKM 301
Query: 151 SSPERYFL 158
S +R L
Sbjct: 302 SGGQRKAL 309
>gi|169612189|ref|XP_001799512.1| hypothetical protein SNOG_09213 [Phaeosphaeria nodorum SN15]
gi|111062285|gb|EAT83405.1| hypothetical protein SNOG_09213 [Phaeosphaeria nodorum SN15]
Length = 316
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 37/192 (19%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE------------- 48
+V +GNPG Y H+ G + + + + K ++S
Sbjct: 108 LLVCSIGNPGSTYANTLHSAGHILTSYLAVHKSYKPFTKGLAGQVSTPDTSGMSFGIFSG 167
Query: 49 -GQLDGLRTILIKPQTF------MNLSGQS--------LLEVMNFYKLPNLENYL-VIHD 92
+ DG + + TF MN+SG+ L +V Y P +E L V+HD
Sbjct: 168 FQRTDGAPITVAQDWTFWQSTSLMNVSGKGVGRAYNEWLKDVKRKYGDPAIEGRLVVVHD 227
Query: 93 DLDLDFGTLRLKTGGGDA-GHNGLKSISEKCGKN-YKRLRIGIGRP----PDTAHIIRHV 146
+L+ G + ++ G A GHNGLKS GK + R+ +GIGRP PD + ++V
Sbjct: 228 ELESQLGKVTVRDGTASAKGHNGLKSCQASLGKTKWWRVGVGIGRPDSREPDV--VAKYV 285
Query: 147 LGNFSSPERYFL 158
L S E+ L
Sbjct: 286 LKKMSPREKSAL 297
>gi|238878698|gb|EEQ42336.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 163
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 88 LVIHDDLDLDFGTLRL-KTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRHV 146
+V+HD+L +D G ++ K G GHNGLKSI + Y +L IGIGRPP + ++ +V
Sbjct: 60 VVLHDELQVDLGKYQIRKPGTSSRGHNGLKSIDKYLKNRYFKLGIGIGRPPASQSVVHYV 119
Query: 147 LGNFSSPERYFLLPIID 163
L FSS E L +ID
Sbjct: 120 LKKFSSQE----LDVID 132
>gi|50305049|ref|XP_452482.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641615|emb|CAH01333.1| KLLA0C06380p [Kluyveromyces lactis]
Length = 186
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 85/165 (51%), Gaps = 17/165 (10%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEIS-------EGQLDG 53
+ ++ LGNP Y RHN G + + R+ F P K + +S E +L+
Sbjct: 6 LLCLSALGNPEPLYRSTRHNAGVIML-RMLKNEFCPDAVLKT-SNVSPHIQYCHEPRLNL 63
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRL-KTGGGDAGH 112
L +L FMNLSG +++ V + KLP+ ++V+HD+L++ G ++L K G GH
Sbjct: 64 L--MLFNKSQFMNLSGHAMIPV--WRKLPHDALHVVLHDELNIPIGNVQLRKPGTSFRGH 119
Query: 113 NGLKS-ISEKCGKNYKRLRIGIGRP--PDTAHIIRHVLGNFSSPE 154
NGL+ I K + +L IGI RP D + +VL NF+ E
Sbjct: 120 NGLRDMIKMKGDDKFHKLGIGIDRPNSRDPRIVADYVLANFTKGE 164
>gi|262361962|gb|ACY58683.1| peptidyl-tRNA hydrolase [Yersinia pestis D106004]
Length = 165
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 39 KKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYK-LPNLENYLVIHDDLDLD 97
+ KF + L G L+ P TFMNLSG+++ + +FY+ LP E LV HD+LD+
Sbjct: 12 ESKFFGYTARLNLAGQDIRLLVPATFMNLSGKAVAAMASFYRILP--EEILVAHDELDIL 69
Query: 98 FGTLRLKTGGGDAGHNGLKSISEKCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G +LK GGG+ GHNGLK I K G N+ RLRIGIG P D + + VLG + E+
Sbjct: 70 PGMAKLKLGGGNGGHNGLKDIQNKLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQ 129
Query: 156 YFLLPIIDNIARSLPLL 172
+ ID R +L
Sbjct: 130 TLIDDAIDESIRCTEVL 146
>gi|302897591|ref|XP_003047674.1| hypothetical protein NECHADRAFT_50703 [Nectria haematococca mpVI
77-13-4]
gi|256728605|gb|EEU41961.1| hypothetical protein NECHADRAFT_50703 [Nectria haematococca mpVI
77-13-4]
Length = 198
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F+V LGNP +Y E+ H+ G ++ + +P++++ + + G + L++
Sbjct: 6 FLVVSLGNPLPQY-ESLHSAGHFALNGLAKVLRYPSFREVTLGKKACLVSQGPKYTLVQS 64
Query: 62 QTFMNLSGQSLLEV---MNFYKLPNLENYLVIHDDLDLDFGTLRLKTGG-GDAGHNGLKS 117
T MN+SG + M P+ + +++HD+L+ D G +RL GHNG+KS
Sbjct: 65 PTLMNISGSFVARAWQDMVKQHDPSSLSLVIVHDELEKDLGIVRLTAWDRSHKGHNGIKS 124
Query: 118 ISEKCGKN------YKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFL 158
+ + + R+ +GIGRP D + R+VL S +R L
Sbjct: 125 VKGSLSQGKYPDSPFVRIALGIGRPKERDPETVSRYVLDRISGEQRRIL 173
>gi|119608091|gb|EAW87685.1| peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae), isoform CRA_a
[Homo sapiens]
Length = 195
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFH--AEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W + H A+++ L + +L
Sbjct: 44 WMVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 101
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN +G+S+ + L E YLV HD+LD G L LK GG G +
Sbjct: 102 LRPRRLMNANGRSVARAAELFGLTAEEVYLV-HDELDKPLGRLALKLGGSARQCQGCGWV 160
Query: 119 S 119
S
Sbjct: 161 S 161
>gi|117623422|ref|YP_852335.1| peptidyl-tRNA hydrolase [Escherichia coli APEC O1]
gi|115512546|gb|ABJ00621.1| peptidyl-tRNA hydrolase [Escherichia coli APEC O1]
Length = 127
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK 124
MNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K G
Sbjct: 1 MNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGN 59
Query: 125 --NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
N+ RLRIGIG P D ++ VLG E+ + ID AR
Sbjct: 60 NPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAAR 104
>gi|322708497|gb|EFZ00075.1| mitochondrial peptidyl-tRNA hydrolase [Metarhizium anisopliae ARSEF
23]
Length = 198
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 13/169 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F+V LGNP +Y E+ H+ G ++ + P +++ + G + L++
Sbjct: 6 FLVISLGNPLPKY-ESLHSAGHFALNGLAKALRHPPFREVKFGRQTCLVSQGPKYTLVQS 64
Query: 62 QTFMNLSGQSLLEVMNFYKL---PNLENYLVIHDDLDLDFGTLRLKTGG-GDAGHNGLKS 117
T MN+SG + +V P+ + +++HD+L+ FG +RL GHNGLKS
Sbjct: 65 PTLMNISGPFVAKVWQEIVRQHDPSSTSLVIVHDELEKAFGDVRLTPWDRSHRGHNGLKS 124
Query: 118 ISEKCGKN------YKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFL 158
+ + ++ + R+ IGIGRP D A + ++VL + +R L
Sbjct: 125 VKKSLLQDKFPESPFARIAIGIGRPAERDAATVSKYVLDKITVEQRRVL 173
>gi|269214289|ref|ZP_06158478.1| aminoacyl-tRNA hydrolase [Neisseria lactamica ATCC 23970]
gi|269210125|gb|EEZ76580.1| aminoacyl-tRNA hydrolase [Neisseria lactamica ATCC 23970]
Length = 123
Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 65/106 (61%), Gaps = 5/106 (4%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG- 123
MN SGQS+ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I + G
Sbjct: 1 MNRSGQSVAALAQFYKI-KPEEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQARLGT 59
Query: 124 KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+Y RLR+GIG P D ++ +VL S+ R I D +A+SL
Sbjct: 60 ADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRR---QIDDAVAKSL 102
>gi|218681501|ref|ZP_03529388.1| peptidyl-tRNA hydrolase [Rhizobium etli CIAT 894]
Length = 143
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%)
Query: 102 RLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPI 161
RL TGGG GHNG+KS+ CGK Y+RL +GIG P + HVLG+F+ +R +L P+
Sbjct: 1 RLNTGGGHGGHNGIKSLDAHCGKEYRRLHLGIGHPGVREMVHNHVLGDFAKADRAWLEPL 60
Query: 162 IDNIARSLPLLAKREDVSFLNHIV 185
++ +A + +L + ED +N I
Sbjct: 61 LETLADNADMLVRNEDSQLMNKIA 84
>gi|213402863|ref|XP_002172204.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
gi|212000251|gb|EEB05911.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
Length = 160
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 19/161 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG ++RH++G + + F +K+ AE DG +L+
Sbjct: 6 LLIGLGNPGSVASKSRHSVGKLMLSL---FAEKNEIGQKWPAE-----HDGF--VLVPST 55
Query: 63 TFMNLSGQSLL----EVMNFYKLPNLENYL--VIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+MN SG+ + E++ Y + E L V+HDD++ G ++LK G GHNG+K
Sbjct: 56 VYMNESGKFVQRVRQEILRKYCHNDEEKLLCIVVHDDMESPLGKVKLKHGTSHRGHNGIK 115
Query: 117 SISEKCG-KNYKRLRIGIGRPPD--TAHIIRHVLGNFSSPE 154
S G + + R+ IGIGR + + + VLGNF E
Sbjct: 116 SCQAFLGNEAFFRISIGIGRCESHLSKDVSKFVLGNFHQAE 156
>gi|225466188|ref|XP_002265105.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 317
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 26 IDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLE 85
+D +H FF +G + L KP T+M+LSG+S + + KLP L+
Sbjct: 140 MDTVHYKEFF-----------RQGCAGDVPVFLAKPWTYMDLSGKSAGPLAAYCKLP-LD 187
Query: 86 NYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI--SEKCGKNYKRLRIGIGRP 136
+ +V HDD+ L +G LRL GG HNGL S+ + + + R R+ +G+P
Sbjct: 188 SVVVFHDDIGLPWGLLRLHHKGGRRNHNGLMSVILYFRGNREFLRPRVDVGKP 240
>gi|71899974|ref|ZP_00682120.1| Aminoacyl-tRNA hydrolase [Xylella fastidiosa Ann-1]
gi|71730261|gb|EAO32346.1| Aminoacyl-tRNA hydrolase [Xylella fastidiosa Ann-1]
Length = 94
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID-RIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF +D + A + K A ++ + G L++P
Sbjct: 6 LIVGLGNPGSEYIKTRHNAGFRFVDGLVQREGQCWALESKLFAYVARVFIAGQWVWLLRP 65
Query: 62 QTFMNLSGQSLLEVMNFYKL 81
TFMNLSG+S+ +NF+K+
Sbjct: 66 VTFMNLSGKSICAGLNFWKI 85
>gi|320325683|gb|EFW81744.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. glycinea str.
B076]
Length = 126
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK 124
MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I + G
Sbjct: 1 MNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQLGN 59
Query: 125 N--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ RLR+GIG P D + + VLG E+ L ID LP
Sbjct: 60 QNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLP 107
>gi|313107334|ref|ZP_07793529.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa 39016]
gi|310880031|gb|EFQ38625.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa 39016]
Length = 154
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+ P T+MN SGQS+ + F+++ + LV HD+LD+ G +LKTGGG GHNGL+
Sbjct: 22 LLIPTTYMNRSGQSVAALAGFFRIAP-DAILVAHDELDMPPGVAKLKTGGGHGGHNGLRD 80
Query: 118 ISEKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
I + G ++ RLR+GIG P ++ + +VLG E+ L ID LP
Sbjct: 81 IIAQLGNQNSFHRLRLGIGHPGHSSLVSGYVLGRAPRSEQELLDTSIDFALGVLP 135
>gi|312601161|gb|ADQ90416.1| Peptidyl-tRNA hydrolase [Mycoplasma hyopneumoniae 168]
Length = 124
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC-G 123
MN SG + E++ FYK+ N ++ ++I+DD++ + G +KT G G G+ I EKC
Sbjct: 1 MNKSGDFVEELIKFYKI-NTQDLMIIYDDMNFEVGQAAIKTTGSAGGQRGMAHIIEKCKT 59
Query: 124 KNYKRLRIGIGRPPDTAHII 143
K KRL+IGI R + +
Sbjct: 60 KEIKRLKIGISRGENAKEYV 79
>gi|46110423|ref|XP_382269.1| hypothetical protein FG02093.1 [Gibberella zeae PH-1]
Length = 202
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 15/168 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F+V LGNP +Y ++ H+ G ++ + + P++++K S G + L++
Sbjct: 6 FLVVSLGNPLPKY-QSLHSAGHFALNGLANVLRNPSFQEKTFGGQSCLVSQGPKYTLVQS 64
Query: 62 QTFMNLSGQSLLEVMN---FYKLPNLENYLVIHDDLDLDFGTLRLKTGG-GDAGHNGLKS 117
T MN+SG+ + N + P+ + +++HD+L+ G + L+ GHNG+K
Sbjct: 65 PTLMNISGRFVARAWNDMIKQQDPSSLSLIIVHDELEAKKGAVSLRAWDRSPRGHNGIKD 124
Query: 118 ISEKCGKN------YKRLRIGIGRPPDTAH----IIRHVLGNFSSPER 155
+ K ++ + R+ +GIGRP D + +VL S+ ER
Sbjct: 125 VKNKLSQDKYPTSPFVRIAVGIGRPSDGERDRNTVSDYVLNRISNEER 172
>gi|289619118|emb|CBI54386.1| unnamed protein product [Sordaria macrospora]
Length = 199
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 15/151 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID----RIHSFHFFPAWKKKFHAEISEGQLDGLRTI 57
F+V LGNPG EY + H+ G M ++ ++ P++ + + + + G +
Sbjct: 7 FLVVSLGNPG-EYRDTYHSAGHMVLESFQKKLPEALGQPSFTSERYGKKAVRTSAGSKYT 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKL-----PNLENYLVIHDDLDLDFGTLRLKTGGGD-AG 111
L++ T MN++G L + + P +++HDDL+ + G ++++ G
Sbjct: 66 LLQSPTLMNITGPWLARAYKDFMVDQGLSPEEVGLVLVHDDLEEELGVVKVRQWKASHRG 125
Query: 112 HNGLKSISEKC----GKNYKRLRIGIGRPPD 138
HNG+KS+ + R+ IGIGRP D
Sbjct: 126 HNGIKSVLASLPPMPDAKWARVSIGIGRPED 156
>gi|322696566|gb|EFY88356.1| mitochondrial peptidyl-tRNA hydrolase [Metarhizium acridum CQMa
102]
Length = 198
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 15/170 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F+V LGNP +Y E+ H+ G ++ + P +++ + + G + L++
Sbjct: 6 FLVVSLGNPLPKY-ESLHSAGHFALNGLVKALRQPPFREVKLGKQTCLVSQGPKYTLVQS 64
Query: 62 QTFMNLSG----QSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGG-GDAGHNGLK 116
T MN+SG ++ E++ + + + +++HD+L+ FG +RL GHNGLK
Sbjct: 65 PTLMNISGPFVAKAWQEIVRQHDASST-SLVIVHDELEKAFGDVRLTPWDRSHRGHNGLK 123
Query: 117 SISEKCGKN------YKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFL 158
S+ + ++ + R+ IGIGRP D A + ++VL + +R L
Sbjct: 124 SVKKSLLQDKFPESPFARIAIGIGRPAERDAATVSKYVLDKITVEQRRVL 173
>gi|289609005|emb|CBI60512.1| unnamed protein product [Sordaria macrospora]
Length = 87
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 28 RIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENY 87
R H F A K+ F I EG++ + +L+KP T+MN SG+S+ E M FYKL +
Sbjct: 14 RDRQVHGFAAPKRAFQGWIQEGRIGTQKILLLKPGTYMNESGRSVGEAMRFYKL-TAADV 72
Query: 88 LVIHDDLDL 96
V HD+LDL
Sbjct: 73 TVFHDELDL 81
>gi|299753529|ref|XP_001833333.2| hypothetical protein CC1G_04312 [Coprinopsis cinerea okayama7#130]
gi|298410343|gb|EAU88606.2| hypothetical protein CC1G_04312 [Coprinopsis cinerea okayama7#130]
Length = 215
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 77/177 (43%), Gaps = 26/177 (14%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD------GLRTI 57
VAGLGN RH+IG + + + HF A + I G +D ++
Sbjct: 18 VAGLGNA--PMPNTRHSIGQYIVSSLGT-HFGIALRSTRGGHIGSGVVDLPSASGPVKIT 74
Query: 58 LIKPQTFMNLSGQSLLEVMNFY------KLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG 111
L K + MN SG S+++ N++V+ D + L + GG G
Sbjct: 75 LFKSKQLMNASGPSIVQAYRAVLSQTGGAPKGSSNFVVLGDSISHTALKLSARLGGSAQG 134
Query: 112 HNGLKSISEKCG--KNYKRLRIGIGR--PPDTAHII-------RHVLGNFSSPERYF 157
HNGLKSIS G K++ + R+G+GR D A II V+G S E+ +
Sbjct: 135 HNGLKSISNALGRAKDFWQFRVGVGRGVDEDGASIIDKNIDAAEWVMGRLSEAEKEY 191
>gi|323706688|ref|ZP_08118196.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum LX-11]
gi|323533968|gb|EGB23811.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 45
Score = 57.8 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLR 102
+L KPQTFMN SG+++ ++++FYKLP L N +V++DD DLD G +R
Sbjct: 1 MLQKPQTFMNSSGEAVYDIVDFYKLP-LSNLIVVYDDKDLDVGKIR 45
>gi|189190068|ref|XP_001931373.1| peptidyl-tRNA hydrolase 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972979|gb|EDU40478.1| peptidyl-tRNA hydrolase 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 370
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 29/164 (17%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG-------QLDGL 54
+VA +GNPG Y H+ G + + + + + K ++S G
Sbjct: 168 LLVASIGNPGATYSNTLHSAGHIVTSALSTAKSYAPFTKGLSGQVSRPPPTHLAFSFTGF 227
Query: 55 RTI-----------LIKPQTFMNLSGQSLLEVMNFY----KLPNLENYL-----VIHDDL 94
R + + + MN+SG + + N + + + N L V+HD+L
Sbjct: 228 RHVPTEHDATQDWTFWQSTSLMNVSGTGVKKAYNEWLRGIRQASGSNTLEGRLVVVHDEL 287
Query: 95 DLDFGTLRLKTGGGDA-GHNGLKSISEKCGK-NYKRLRIGIGRP 136
+ G + ++ GG A GHNG+KS ++ G + R+ +GIGRP
Sbjct: 288 ESALGKITIRDGGVSAKGHNGIKSCQQQLGGIKWWRVGVGIGRP 331
>gi|302404974|ref|XP_003000324.1| predicted protein [Verticillium albo-atrum VaMs.102]
gi|261360981|gb|EEY23409.1| predicted protein [Verticillium albo-atrum VaMs.102]
Length = 194
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 7 LGNPGHEYCENRHNIGFMCIDR-IHSFHFFPAWKKKFHAEISEGQLDGLRTI--LIKPQT 63
LGNP Y H+ G + I PA K HA ++ L L L++ +
Sbjct: 11 LGNPS-PYLNTLHSAGHHALAALIPLLPSQPALAKTRHA--AKAPLASLSPAYALLQSPS 67
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRL-KTGGGDAGHNGLKSI---- 118
MN+SG+ ++ P L + LV+HDDL+ D G +R+ K GHNG+KS+
Sbjct: 68 LMNVSGKYAAAAYRAFEDPTL-SLLVVHDDLEEDLGVVRIRKWNSSHRGHNGVKSVGKLL 126
Query: 119 --SEKCGKNYKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFL 158
++ + R+ +GIGRP + + +VL + ER L
Sbjct: 127 RPADFPAARFARISVGIGRPEAREREAVSEYVLREMTGVERSVL 170
>gi|74205061|dbj|BAE20993.1| unnamed protein product [Mus musculus]
Length = 209
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKK--KFHAEISEGQLDGLRTIL 58
++VAGLGN H RH++G + +I W + + A+++ L + +L
Sbjct: 35 WLVAGLGN--HGMPGTRHSVGMAVLGQIARRLGVAENWTRNSRCAADLALAPLGDAQLVL 92
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGG 107
++P+ MN++G+S+ + L E YLV HD+LD G L LK GG
Sbjct: 93 LRPRRLMNVNGRSVARAAELFGLTAEEIYLV-HDELDKPLGKLALKLGG 140
>gi|194693948|gb|ACF81058.1| unknown [Zea mays]
Length = 135
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG++Y RHN+GF +DRI + + + + G + + +++KP
Sbjct: 62 WLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKP 121
Query: 62 QTFMNLSGQSL 72
Q++MN SG+++
Sbjct: 122 QSYMNYSGEAV 132
>gi|85104158|ref|XP_961682.1| hypothetical protein NCU01070 [Neurospora crassa OR74A]
gi|18376205|emb|CAD21321.1| related to aminoacyl-tRNA hydrolase [Neurospora crassa]
gi|28923230|gb|EAA32446.1| predicted protein [Neurospora crassa OR74A]
Length = 228
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 15/151 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID----RIHSFHFFPAWKKKFHAEISEGQLDGLRTI 57
F+V LGNPG EY + H+ G + ++ ++ P++ + + + + G +
Sbjct: 36 FLVVSLGNPG-EYRDTFHSAGHLVLESFQKKLPEDLGQPSFTSERYGKKAVRASAGSKYT 94
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKL-----PNLENYLVIHDDLDLDFGTLRLKTGGGD-AG 111
L++ T MN++G L Y + P +++HDDL+ + G ++++ G
Sbjct: 95 LLQSPTLMNITGPWLARAYKDYLVDHGLSPEEVGLVLVHDDLEEELGVVKVRQWKASHRG 154
Query: 112 HNGLKSISEKC----GKNYKRLRIGIGRPPD 138
HNG+KS+ + R+ IGIGRP D
Sbjct: 155 HNGIKSVLASLPPIPDAKWARVSIGIGRPDD 185
>gi|71024435|ref|XP_762447.1| hypothetical protein UM06300.1 [Ustilago maydis 521]
gi|46097696|gb|EAK82929.1| hypothetical protein UM06300.1 [Ustilago maydis 521]
Length = 721
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 59/137 (43%), Gaps = 42/137 (30%)
Query: 42 FHAEISEGQLDGLRTILIKPQTFMNLSG---QSLLEVMNFY------KLP---------N 83
F + S+ + + L KP MNLSG ++ L+ + Y P N
Sbjct: 527 FSSHPSDSTIFSVNLCLFKPSHAMNLSGVGLKAFLQTRHPYFASTSHSTPSEHASTGTWN 586
Query: 84 LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI------------------------S 119
++ LV+ D+LDLDFG+++ K G GHNG++ I +
Sbjct: 587 TDDILVLQDELDLDFGSVKRKDAGSARGHNGVRDIVARLEIPAVSSTTCASTKRTASNGA 646
Query: 120 EKCGKNYKRLRIGIGRP 136
E G RLRIGIGRP
Sbjct: 647 EASGPKLTRLRIGIGRP 663
>gi|149038989|gb|EDL93209.1| rCG45678, isoform CRA_a [Rattus norvegicus]
Length = 310
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKK--KFHAEISEGQLDGLRTIL 58
+ VAGLGNPG RH++G + +I W + + A+++ + +L
Sbjct: 138 YKVAGLGNPGMP--GTRHSVGMAVLGQIAQRLGVAENWARDSRCAADLALAPFGDAQLVL 195
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGG 107
++P+ MN++G+S+ + + L E YLV HD+LD G L LK GG
Sbjct: 196 LRPRRLMNVNGRSVAKAAELFGLSAEEIYLV-HDELDKPLGKLALKLGG 243
>gi|146283516|ref|YP_001173669.1| peptidyl-tRNA hydrolase [Pseudomonas stutzeri A1501]
gi|145571721|gb|ABP80827.1| peptidyl-tRNA hydrolase [Pseudomonas stutzeri A1501]
Length = 126
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG- 123
MN SGQ++ + F+++P E+ LV HD+LD+ G +LK GGG GHNGL+ I K G
Sbjct: 1 MNRSGQAVAALAGFFRIPP-ESILVAHDELDMPPGVAKLKQGGGHGGHNGLRDIIAKLGN 59
Query: 124 -KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
++ RLR+GIG P + + +VLG ER L ID
Sbjct: 60 QNSFHRLRLGIGHPGHASLVSGYVLGRAPQAEREKLDASID 100
>gi|153879453|ref|ZP_02004828.1| Aminoacyl-tRNA hydrolase [Beggiatoa sp. PS]
gi|152064083|gb|EDN65172.1| Aminoacyl-tRNA hydrolase [Beggiatoa sp. PS]
Length = 106
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 88 LVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN-YKRLRIGIGRPPDTAHIIRHV 146
+VIHDDLD G R+K G D HNGLKSI G N + RLRIGIG P + +V
Sbjct: 1 MVIHDDLDFPPGIARIKKSGSDCRHNGLKSIIAHLGSNQFLRLRIGIGHPGHRDEVTSYV 60
Query: 147 LGNFSSPERYFLLPIIDNIARSLPLL 172
L ++P R + I I SL ++
Sbjct: 61 L---NAPTRDDQIAIDIAIKVSLEVM 83
>gi|171693449|ref|XP_001911649.1| hypothetical protein [Podospora anserina S mat+]
gi|170946673|emb|CAP73476.1| unnamed protein product [Podospora anserina S mat+]
Length = 198
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 12/147 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID--RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
+V GLGNPG Y H+ G + ++ R P++K H + S G + +
Sbjct: 6 ILVVGLGNPGEAYRNTYHSAGNIVLNALRNQMADTQPSFKVARHGKKSTEASIGPKYSFL 65
Query: 60 KPQTFMNLSGQSLLEVMNFYKL-----PNLENYLVIHDDLDLDFGTLRLKTGG-GDAGHN 113
+ MN++G + + P +++HDDL+ + G ++++ GHN
Sbjct: 66 QSPCVMNVTGTWFARAYREHLIDNGLSPAELGVVLVHDDLEEELGVVKIRDWARSHRGHN 125
Query: 114 GLKSISEKCGKN----YKRLRIGIGRP 136
G+KS++ + + R+ IGIGRP
Sbjct: 126 GIKSVNASLKADPEGKWARVSIGIGRP 152
>gi|294876857|ref|XP_002767825.1| Peptidyl-tRNA hydrolase, putative [Perkinsus marinus ATCC 50983]
gi|239869695|gb|EER00543.1| Peptidyl-tRNA hydrolase, putative [Perkinsus marinus ATCC 50983]
Length = 204
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKL--PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
L+KP+TFMN SG + ++ +L + + LV+ DDL + G LR+K GG G NGL
Sbjct: 59 LLKPRTFMNRSGLAAGPALSDLRLRADDRNSVLVVCDDLTIPLGQLRMKPGGSSGGQNGL 118
Query: 116 KSISEKC-GKNYKRLRIGIGR 135
SI + + RLRIG+G+
Sbjct: 119 DSIIKVTRTEEVARLRIGMGK 139
>gi|254569914|ref|XP_002492067.1| One of two (see also PTH2) mitochondrially-localized peptidyl-tRNA
hydrolases [Pichia pastoris GS115]
gi|238031864|emb|CAY69787.1| One of two (see also PTH2) mitochondrially-localized peptidyl-tRNA
hydrolases [Pichia pastoris GS115]
gi|328351443|emb|CCA37842.1| peptidyl-tRNA hydrolase, PTH1 family [Pichia pastoris CBS 7435]
Length = 213
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 85/184 (46%), Gaps = 21/184 (11%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW----KKKFHAEISEGQLDGLRT 56
+ ++A +GNP + RH+IG ++R+ + K KF+ E +
Sbjct: 21 LLVLASIGNPESSFRGTRHSIGHHILNRLKQIYQADEQLTIDKNKFYYNRREEP----QV 76
Query: 57 ILIKPQTFMNLSGQSLLEVM-NFYKLPNLEN--YLVIHDDLDLDFGTLRLKTG-GGDAGH 112
+ + + MNLSG+ + + + +K + N +++HD+LD G + + GH
Sbjct: 77 LFYQSNSLMNLSGKPISKAFKSVHKWTDEYNPVLVILHDELDCPVGKFKTRRQMSSHRGH 136
Query: 113 NGLKSISEKCGKNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARSLP 170
NGL+SI++ G + + IGI RP + + +VL + ++ I R++P
Sbjct: 137 NGLRSINQHMGGGFTTISIGIDRPESKSSNAVASYVLAKVPPHD-------LERIDRTIP 189
Query: 171 LLAK 174
+ K
Sbjct: 190 SIQK 193
>gi|122890586|emb|CAM14094.1| novel protein similar to human and mouse peptidyl-tRNA hydrolase 1
homolog (S. cerevisiae) (PTRH1; zgc:112961) [Danio
rerio]
Length = 154
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWK--KKFHAEISEGQLDGLRTILI 59
+V GLGNPG +RH++G + + P W+ +K E+ QL ++ +L+
Sbjct: 58 MVVGLGNPG--MTGSRHSVGMAVLTTLAERLGAPDGWRSDRKVSGEVVVTQLQDVQLVLL 115
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFG 99
+P+ MN++G S+ + + Y L E+ L+IHD+LD G
Sbjct: 116 RPKLLMNVNGVSVAKAASRY-LIQPEHILLIHDELDKPLG 154
>gi|156051272|ref|XP_001591597.1| hypothetical protein SS1G_07043 [Sclerotinia sclerotiorum 1980]
gi|154704821|gb|EDO04560.1| hypothetical protein SS1G_07043 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 333
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAE--ISEGQLDGLRTIL 58
++ +GNP Y H+ G + + S P + K + H +S G + L
Sbjct: 152 LLICSIGNPA-PYTNTLHSAGHTILTLLSSTLSQPNFIKSRSHGNGLLSPGPI----YTL 206
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENY------LVIHDDLDLDFGTLRLKTGGGDA-G 111
K + MN+SG + + + + +VIHD+++L G + +K G G
Sbjct: 207 WKSSSLMNISGTGVNAAWTTFLRESASSAAAECKLVVIHDEMELAPGKINVKPGSNSPKG 266
Query: 112 HNGLKSISEKC-GKNYKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
HNGLKSI + G+ Y R+ IGIGRP D + +VL S+ E+ + + +
Sbjct: 267 HNGLKSIRDSLRGQPYTRIGIGIGRPESRDPRVVAGYVLRKMSAEEKRKIEGCVGKVVEE 326
Query: 169 LPLLA 173
L L+
Sbjct: 327 LARLS 331
>gi|294921825|ref|XP_002778733.1| Peptidyl-tRNA hydrolase, putative [Perkinsus marinus ATCC 50983]
gi|239887453|gb|EER10528.1| Peptidyl-tRNA hydrolase, putative [Perkinsus marinus ATCC 50983]
Length = 160
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 17/79 (21%)
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KP+TFMN SGQ LV+ DDL + G LR+K GG G NGL S
Sbjct: 33 LLKPRTFMNRSGQ----------------VLVVCDDLTIPLGQLRMKPGGSSGGQNGLDS 76
Query: 118 ISEKC-GKNYKRLRIGIGR 135
I + + RLRIG+G+
Sbjct: 77 IIKVTRTEEVARLRIGMGK 95
>gi|406431|gb|AAD12470.1| unknown [Mycoplasma genitalium]
Length = 116
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 79 YKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC-GKNYKRLRIGIGRPP 137
+++P L N +++HD++ D G +RLK G HNG+KS+ + + RLR GI +
Sbjct: 7 FQIP-LANIMIVHDEIAFDLGVIRLKMQGSANNHNGIKSVIRHLDTEQFNRLRFGI-KSQ 64
Query: 138 DTAHII-RHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+T++I+ V+ F + E L + I +S+ LL +
Sbjct: 65 NTSNILHEQVMSEFQNSE---LTKLEVAITKSVELLKR 99
>gi|297745170|emb|CBI39162.3| unnamed protein product [Vitis vinifera]
Length = 92
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 44 AEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRL 103
A +G + + L P T+MNLSG+S+ + +YKLP L +V HDD L G L L
Sbjct: 8 AIFGQGFVGDVLVFLANPHTYMNLSGESVGPLAAYYKLP-LNRMVVFHDDKSLPCGVLCL 66
Query: 104 KTGGGDAGHNGLK 116
GG HNG +
Sbjct: 67 HHKGGHGSHNGYE 79
>gi|226329838|ref|ZP_03805356.1| hypothetical protein PROPEN_03750 [Proteus penneri ATCC 35198]
gi|225200633|gb|EEG82987.1| hypothetical protein PROPEN_03750 [Proteus penneri ATCC 35198]
Length = 85
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG +Y + RHN G +D + H + KF + L+G L+ P
Sbjct: 6 LIVGLANPGADYAQTRHNAGAWYVDLLAQRHQQSLKEESKFFGYTARINLNGNDVRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNF 78
TFMNLSG+++ + NF
Sbjct: 66 TTFMNLSGKAVQAMANF 82
>gi|315048657|ref|XP_003173703.1| hypothetical protein MGYG_03876 [Arthroderma gypseum CBS 118893]
gi|311341670|gb|EFR00873.1| hypothetical protein MGYG_03876 [Arthroderma gypseum CBS 118893]
Length = 255
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 70/189 (37%), Gaps = 55/189 (29%)
Query: 2 FIVAGLGNPGHEYCENRHNIG------FMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLR 55
F +A +GNPG Y H+ G F + FH P E +
Sbjct: 7 FFIASIGNPGQAYYNTLHSAGHILLRSFAEVMNAAPFHPDPNLSNGLTTETYLPKTQSRL 66
Query: 56 TILIKPQTFMNLSGQSLLEVMNFY----------KLPNLE------------------NY 87
T+ P ++MN SG SL + +P+ + N
Sbjct: 67 TLWQSP-SYMNTSGPSLARAYKAWLARENIASDIPIPSQDVGKKKARGMQPMTHVRATNL 125
Query: 88 LVIHDDLDLDFGTLRLKTGGGDA---GHNGLKSISEKCGKNYK----------------- 127
+++HD+L+ +G L ++ GG + GHNG+KS+ E K
Sbjct: 126 ILLHDELERSYGNLYIRYGGPEMSSRGHNGIKSVVESLVKAKLLSSSGGALSSTNPTALI 185
Query: 128 RLRIGIGRP 136
RL IG+GRP
Sbjct: 186 RLAIGVGRP 194
>gi|320588213|gb|EFX00688.1| peptidyl-tRNA hydrolase 2 [Grosmannia clavigera kw1407]
Length = 201
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 17/150 (11%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKF----HAEISEGQLDGLRTI 57
+V LGNP Y H+ G + ++ + P + + A++S T+
Sbjct: 7 VLVVSLGNPA-PYRNTLHSAGHLALEALRRELQLPPFASRRIGRQAAQVSPVSAASRYTL 65
Query: 58 LIKPQTFMNLSG----QSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGG-GDAGH 112
P T MN+SG ++ EV+ +V+HDDL+ G ++++ GH
Sbjct: 66 AQSP-TLMNVSGPWVARAWEEVLRGSSDATGAGLIVLHDDLEEALGVVKIRPWERSHRGH 124
Query: 113 NGLKSISEKCGKN------YKRLRIGIGRP 136
NGLKSI+ ++ + +L +GIGRP
Sbjct: 125 NGLKSINASLRRSVHPAARWAKLSVGIGRP 154
>gi|225433776|ref|XP_002268699.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 518
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 44 AEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRL 103
A +G + + L P T+MNLSG+S+ + +YKLP L +V HDD L G L L
Sbjct: 8 AIFGQGFVGDVLVFLANPHTYMNLSGESVGPLAAYYKLP-LNRMVVFHDDKSLPCGVLCL 66
Query: 104 KTGGGDAGHNGLKSI 118
GG HNG + +
Sbjct: 67 HHKGGHGSHNGRRIV 81
>gi|320165961|gb|EFW42860.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 230
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 19/86 (22%)
Query: 51 LDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
L + +L KP +FMN G ++ +L+ +LK GG
Sbjct: 120 LADVAVVLFKPSSFMNECGGNVASA-------------------ELNLAEFKLKAGGSAK 160
Query: 111 GHNGLKSISEKCGKNYKRLRIGIGRP 136
GHNG++SI ++ RLRIGIGRP
Sbjct: 161 GHNGVRSIGQRVSLEIPRLRIGIGRP 186
>gi|116198633|ref|XP_001225128.1| hypothetical protein CHGG_07472 [Chaetomium globosum CBS 148.51]
gi|88178751|gb|EAQ86219.1| hypothetical protein CHGG_07472 [Chaetomium globosum CBS 148.51]
Length = 197
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 25/186 (13%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTI---- 57
+V LGNPG E H+ G + ++ + P+ + F A+ G+L+ L +I
Sbjct: 6 LVVISLGNPG-EMRNTYHSAGHIVLEALQRA-LGPS-QPSFSAQ-RIGKLNTLASIGSQY 61
Query: 58 -LIKPQTFMNLSG----QSLLEVMNFYKLPNLE-NYLVIHDDLDLDFGTLRLKTGG-GDA 110
L++ MN++G + + + +L E +++HDDL+ + G ++++
Sbjct: 62 SLLQSPAVMNVTGPWAAAAYRQQLVDSRLGAAEVGVVLVHDDLEEELGVIKVREWKRSPR 121
Query: 111 GHNGLKSISEKCGKN-----YKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLLPIID 163
GHNG+KS+ G N + R+ +GIGRP D A + VL R L D
Sbjct: 122 GHNGVKSVHAALGANPAVGKWARVSVGIGRPDARDKAAVSNFVLSKVPRATRSVLE---D 178
Query: 164 NIARSL 169
N +R L
Sbjct: 179 NGSRGL 184
>gi|327300933|ref|XP_003235159.1| hypothetical protein TERG_04211 [Trichophyton rubrum CBS 118892]
gi|326462511|gb|EGD87964.1| hypothetical protein TERG_04211 [Trichophyton rubrum CBS 118892]
Length = 255
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 70/189 (37%), Gaps = 55/189 (29%)
Query: 2 FIVAGLGNPGHEYCENRHNIG------FMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLR 55
F +A +GNPG Y H+ G F + FH P E +
Sbjct: 7 FFIASIGNPGQTYYNTLHSAGHILLRSFAELMNAGPFHPDPTLSNGLTTETYLPKTRSRL 66
Query: 56 TILIKPQTFMNLSGQSLLEVMNFY------------KLPNL----------------ENY 87
T+ P ++MN SG SL + P++ N
Sbjct: 67 TLWQSP-SYMNTSGPSLARAYKLWLARENLASDIPIPPPDIGKKKARGMQPMVHVRATNL 125
Query: 88 LVIHDDLDLDFGTLRLKTGGGDA---GHNGLKSISEK----------CGKNYK------- 127
+++HD+L+ +G L ++ GG + GHNG+KS+ E CG
Sbjct: 126 ILLHDELERSYGNLYIRYGGPEMSSRGHNGIKSVVESLVKARLLSSGCGALSSTNPTALI 185
Query: 128 RLRIGIGRP 136
RL IG+GRP
Sbjct: 186 RLAIGVGRP 194
>gi|296808913|ref|XP_002844795.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238844278|gb|EEQ33940.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 250
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 54/188 (28%)
Query: 2 FIVAGLGNPGHEYCENRHNIG------FMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLR 55
F +A +GNPG Y H+ G F + F+ P+ E +
Sbjct: 7 FFIASIGNPGQTYYNTLHSAGHILLRSFAELMNAGPFNPDPSLSNGLTTETYLPKTQSRL 66
Query: 56 TILIKPQTFMNLSGQSLLEVMNFY----------KLPNLE------------------NY 87
T+ P ++MN SG SL+ + +P L+ N
Sbjct: 67 TLWQSP-SYMNTSGPSLVRAYKSWLARENLASDIPVPPLDVGKRKARGMQPMTHTRATNL 125
Query: 88 LVIHDDLDLDFGTLRLKTGGGDA---GHNGLKSISEKCGKNYK----------------R 128
+++HD+L+ +G L ++ GG + GHNG+KS+ E K R
Sbjct: 126 ILLHDELERSYGNLHIRYGGPEMSSRGHNGIKSVVESLVKAKLLSSGGGLSLASPTALMR 185
Query: 129 LRIGIGRP 136
L IG+GRP
Sbjct: 186 LAIGVGRP 193
>gi|260945179|ref|XP_002616887.1| hypothetical protein CLUG_02331 [Clavispora lusitaniae ATCC 42720]
gi|238848741|gb|EEQ38205.1| hypothetical protein CLUG_02331 [Clavispora lusitaniae ATCC 42720]
Length = 196
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFM 65
+GNPG NRH+ G + H F A + + S LD + + +K +M
Sbjct: 7 SIGNPGRM---NRHSTGHYVLQ--HLVSDFGATQLVKKGKYSITSLDNV--MFVKSNAYM 59
Query: 66 NLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS-EKCGK 124
N SG+SL + K+ +V+ DD +L +RL+ + HNG+KSI E +
Sbjct: 60 NESGESLRAFLGNEKIRQCI-LVVLFDDFELVMPKVRLQRLKQNESHNGIKSIGREIQSQ 118
Query: 125 NYKRLRIGIGRPPDTAHIIRH-----VLGNFSSPERYFLLPIIDNIAR 167
N + L++G+G P + R VL +F E+ L + I +
Sbjct: 119 NIEALKLGVGIGPKPQNASRDSMASWVLSDFKLEEKQLLSTSLQTIYK 166
>gi|169835715|ref|ZP_02868903.1| peptidyl-tRNA hydrolase [candidate division TM7 single-cell isolate
TM7a]
Length = 93
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 96 LDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGI 133
+DFG LR++ G DAG+NG+KS++ GK++ RLRIGI
Sbjct: 2 IDFGKLRIRLSGRDAGNNGVKSLNAHLGKDFARLRIGI 39
>gi|254429300|ref|ZP_05043007.1| hypothetical protein ADG881_2530 [Alcanivorax sp. DG881]
gi|196195469|gb|EDX90428.1| hypothetical protein ADG881_2530 [Alcanivorax sp. DG881]
Length = 112
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG- 123
MN GQ+ ++NF+ +P + L+ HD+LDL G R GGG GHNGL+ I + G
Sbjct: 1 MNRGGQATAALVNFFPIP-VTQMLIAHDELDLPPGCARFNQGGGHGGHNGLRDIISRHGN 59
Query: 124 -KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+++ RLR+GI P + HVL S +R
Sbjct: 60 SRDFYRLRVGIRHPGSADRVTPHVLNKPSKADR 92
>gi|326468719|gb|EGD92728.1| hypothetical protein TESG_00297 [Trichophyton tonsurans CBS 112818]
Length = 255
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 70/189 (37%), Gaps = 55/189 (29%)
Query: 2 FIVAGLGNPGHEYCENRHNIG------FMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLR 55
F +A +GNPG Y H+ G F + FH P E +
Sbjct: 7 FFIASIGNPGQTYYNTLHSAGHILLRSFAELMNAAPFHVDPILSNGLTTETYLPKTRSRL 66
Query: 56 TILIKPQTFMNLSGQSLLEVMNFY----------KLPNLE------------------NY 87
T+ P ++MN SG SL + +P+ + N
Sbjct: 67 TLWQSP-SYMNTSGPSLARAYKSWLARENLSSDIPIPSPDIGKKKARGMQPMVHVRATNL 125
Query: 88 LVIHDDLDLDFGTLRLKTGGGDA---GHNGLKSISEKCGK-----------------NYK 127
+++HD+L+ +G L ++ GG + GHNG+KS+ E K
Sbjct: 126 ILLHDELERSYGNLYIRYGGPEMSSRGHNGIKSVVESLVKARLLSSGGGAFSSTNPTALI 185
Query: 128 RLRIGIGRP 136
RL IG+GRP
Sbjct: 186 RLAIGVGRP 194
>gi|150864568|ref|XP_001383437.2| hypothetical protein PICST_30737 [Scheffersomyces stipitis CBS
6054]
gi|149385824|gb|ABN65408.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 186
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 17/178 (9%)
Query: 17 NRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVM 76
NRH+ G + H +F A + + S + + +L+K T+MN SG+ + +
Sbjct: 2 NRHSTGHFILK--HLVEYFSAKQLVRRGDYSVTRTNDYSVVLVKSNTYMNESGRGFRQFV 59
Query: 77 NFYKL-PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE-----KCGKNYKRLR 130
+ P+ ++++DD D G ++L + HNG+ IS K +L
Sbjct: 60 DNEDFQPSQSIVVILYDDFDNKLGKVKLSELKKNESHNGIGDISRALHGIKSDVKIYKLG 119
Query: 131 IGIGRPPDTAH---IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIV 185
IGIG P A + VL F+ E L S L+ K D + N+ V
Sbjct: 120 IGIGPKPSKASGAIVSNWVLSKFTDEELTILRET------SFNLVTKYVDEIYENNAV 171
>gi|326481329|gb|EGE05339.1| peptidyl-tRNA hydrolase [Trichophyton equinum CBS 127.97]
Length = 255
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 70/189 (37%), Gaps = 55/189 (29%)
Query: 2 FIVAGLGNPGHEYCENRHNIG------FMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLR 55
F +A +GNPG Y H+ G F + FH P E +
Sbjct: 7 FFIASIGNPGQTYYNTLHSAGHILLRSFAELMNAAPFHVDPILSNGLTTETYLPKTRSRL 66
Query: 56 TILIKPQTFMNLSGQSLLEVMNFY----------KLPNLE------------------NY 87
T+ P ++MN SG SL + +P+ + N
Sbjct: 67 TLWQSP-SYMNTSGPSLARAYKSWLARENLASDIPIPSPDIGKKKARGMQPMVHVRATNL 125
Query: 88 LVIHDDLDLDFGTLRLKTGGGDA---GHNGLKSISEKCGK-----------------NYK 127
+++HD+L+ +G L ++ GG + GHNG+KS+ E K
Sbjct: 126 ILLHDELERSYGNLYIRYGGPEMSSRGHNGIKSVVESLVKARLLSSGGGAFSSTNPTALI 185
Query: 128 RLRIGIGRP 136
RL IG+GRP
Sbjct: 186 RLAIGVGRP 194
>gi|310790371|gb|EFQ25904.1| peptidyl-tRNA hydrolase [Glomerella graminicola M1.001]
Length = 200
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF--HFFPAWKK-KFHAEISEGQLDGLRTIL 58
F++ LGNP Y H+ G ++ + PA+ + +F + G + +
Sbjct: 6 FLLISLGNP-EPYYNTLHSAGHHALNHLQKLLGPSQPAFHRGRFGGSPCLASI-GPKYAM 63
Query: 59 IKPQTFMNLSGQSLLEVMNFY---KLPNLENYLVIHDDLDLDFGTLRL-KTGGGDAGHNG 114
I+ MN+SG+ + + + P + L++HDDL+ + G ++ K GHNG
Sbjct: 64 IQSPAVMNVSGKWVAKAWKETLGSRDPTDLSLLLVHDDLEEELGVVKTRKWKSSHRGHNG 123
Query: 115 LKSI------SEKCGKNYKRLRIGIGRPP--DTAHIIRHVLGNFSSPER 155
+KS+ ++ G + R+ IGIGRP + A + +VL S +R
Sbjct: 124 VKSVNACLRQADYPGSEWARICIGIGRPEEREKATVSNYVLKPMSRQQR 172
>gi|320039776|gb|EFW21710.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 240
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 37/153 (24%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI------HSFHFFPAWKKKFHAE--ISEGQLDG 53
+A LGNP +Y + H+ G + + + +SF P K E + Q
Sbjct: 4 LFIASLGNPPPKYHKTLHSAGHILLRAVAEHLSANSFALSPHLKGALATEAYLPRSQT-- 61
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFY--------KLPNLENY---------------LVI 90
R L + T MN+SG +++ + LP N +++
Sbjct: 62 -RLTLWQSPTLMNISGPTMVRAYKSWLAREGADPVLPLAANTPGRKKNADHRPPLSLILV 120
Query: 91 HDDLDLDFGTLRLKTGGGD---AGHNGLKSISE 120
HD+L+L G LR++ GG + GHNG+KS+++
Sbjct: 121 HDELELHPGELRIRRGGAELSARGHNGVKSVTQ 153
>gi|259482957|tpe|CBF77926.1| TPA: carboxylesterase, putative (AFU_orthologue; AFUA_5G05940)
[Aspergillus nidulans FGSC A4]
Length = 202
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF---HFFPAWKKKFHAEISEGQLDGLRTIL 58
+A +GNPG Y RH+ G + +D I H P +K + D R ++
Sbjct: 9 LFIASIGNPGR-YRNTRHSAGHVLLDAITPLLPNHLPPRYKTWQSPSLMN---DSGRKLV 64
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA----GHNG 114
+ +TF L + MN L +++HD+L+ G + ++ GG + GHNG
Sbjct: 65 RELETFKRLETST---TMNAKPL----TLVILHDELEKPLGKIVVRRGGPEKYSLRGHNG 117
Query: 115 LKSISEKCGKNYK----------RLRIGIGRP 136
LK I + K R+ +GIGRP
Sbjct: 118 LKDIFQWLDKKKMYPHDPALSILRIGVGIGRP 149
>gi|303311711|ref|XP_003065867.1| hypothetical protein CPC735_050920 [Coccidioides posadasii C735
delta SOWgp]
gi|240105529|gb|EER23722.1| hypothetical protein CPC735_050920 [Coccidioides posadasii C735
delta SOWgp]
Length = 240
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 37/153 (24%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI------HSFHFFPAWKKKFHAE--ISEGQLDG 53
+A LGNP +Y + H+ G + + + +SF P K E + Q
Sbjct: 4 LFIASLGNPPPKYHKTLHSAGHILLRAVAEHLSANSFALSPHLKGALATEAYLPHSQT-- 61
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFY--------KLPNLENY---------------LVI 90
R L + T MN+SG +++ + LP N +++
Sbjct: 62 -RLTLWQSPTLMNISGPTMVRAYKSWLAREGADPVLPLAANTPGRKKNADHRPPLSLILV 120
Query: 91 HDDLDLDFGTLRLKTGGGD---AGHNGLKSISE 120
HD+L+L G LR++ GG + GHNG+KS+++
Sbjct: 121 HDELELHPGELRIRRGGAELSARGHNGVKSVTQ 153
>gi|67903690|ref|XP_682101.1| hypothetical protein AN8832.2 [Aspergillus nidulans FGSC A4]
gi|40740930|gb|EAA60120.1| hypothetical protein AN8832.2 [Aspergillus nidulans FGSC A4]
Length = 211
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF---HFFPAWKKKFHAEISEGQLDGLRTIL 58
+A +GNPG Y RH+ G + +D I H P +K + D R ++
Sbjct: 9 LFIASIGNPGR-YRNTRHSAGHVLLDAITPLLPNHLPPRYKTWQSPSLMN---DSGRKLV 64
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA----GHNG 114
+ +TF L + MN L +++HD+L+ G + ++ GG + GHNG
Sbjct: 65 RELETFKRLETST---TMNAKPL----TLVILHDELEKPLGKIVVRRGGPEKYSLRGHNG 117
Query: 115 LKSISEKCGKNYK----------RLRIGIGRP 136
LK I + K R+ +GIGRP
Sbjct: 118 LKDIFQWLDKKKMYPHDPALSILRIGVGIGRP 149
>gi|126640882|ref|YP_001083866.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii ATCC 17978]
gi|126386766|gb|ABO11264.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii ATCC 17978]
Length = 95
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%)
Query: 96 LDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
++ G +RLKTGGG GHNGL+ I G N+ RLRIGIG P + HVLG S E+
Sbjct: 1 MNPGVIRLKTGGGHGGHNGLRDIVPHIGPNFHRLRIGIGHPGSKERVSGHVLGKAPSSEQ 60
Query: 156 YFLLPIIDNIARSLPLLAKREDVSFLNHI 184
+ ID+ + LL + + +N I
Sbjct: 61 SLMDGAIDHALSKVKLLVQGQVPQAMNQI 89
>gi|119193889|ref|XP_001247548.1| hypothetical protein CIMG_01319 [Coccidioides immitis RS]
Length = 240
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 37/153 (24%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI------HSFHFFPAWKKKFHAE--ISEGQLDG 53
+A LGNP +Y + H+ G + + + +SF P K E + Q
Sbjct: 4 LFIASLGNPPPKYHKTLHSAGHIILRAVAEHLSANSFAPSPHLKGALATEAYLPRSQT-- 61
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFY--------KLPNLENY---------------LVI 90
R L + T MN+SG +++ + LP N +++
Sbjct: 62 -RLTLWQSPTLMNISGPTMVRAYKSWLAREGADPVLPLAANTPGRKKNADHRPPLSLILV 120
Query: 91 HDDLDLDFGTLRLKTGGGD---AGHNGLKSISE 120
HD+L+L G LR++ GG + GHNG+KS+++
Sbjct: 121 HDELELHPGELRIRRGGAELSARGHNGVKSVTQ 153
>gi|323706687|ref|ZP_08118195.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323533967|gb|EGB23810.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 38
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI 29
M+IV GLGNPG EY + RHN+GF ID +
Sbjct: 1 MYIVVGLGNPGKEYEKTRHNVGFEVIDSL 29
>gi|39941232|ref|XP_360153.1| hypothetical protein MGG_05527 [Magnaporthe oryzae 70-15]
gi|145022200|gb|EDK06220.1| hypothetical protein MGG_05527 [Magnaporthe oryzae 70-15]
Length = 215
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 17/173 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH----SFHFFPAWKKKFHAEISEGQLDGLRTI 57
++ +GNP + E H+ G M + ++ + + P + + + G +
Sbjct: 11 MLIVSVGNPPPLH-ETLHSAGHMVLRKLQQHLDATDYQPGFSSQRFGTKNCIASIGPKYT 69
Query: 58 LIKPQTFMNLSGQSLLEVMNFY-KLPNLEN--YLVIHDDLDLDFG-TLRLKTGGGDAGHN 113
L++ T MN+ G L + +LP+ ++ +V+ D+L+L+FG L + GHN
Sbjct: 70 LLQSPTQMNIVGPWLASAWKQHSRLPSDQHPALVVLQDELELEFGKALTREWSSSHKGHN 129
Query: 114 GLKSISEKC------GKNYKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFL 158
G++S + + R+RIGIGRP D + + +VL + E+ L
Sbjct: 130 GIRSAQQSLPPSIHKDERLARVRIGIGRPHERDRSAVSDYVLRRATRDEKDML 182
>gi|238503468|ref|XP_002382967.1| peptidyl-tRNA hydrolase, putative [Aspergillus flavus NRRL3357]
gi|220690438|gb|EED46787.1| peptidyl-tRNA hydrolase, putative [Aspergillus flavus NRRL3357]
Length = 166
Score = 42.7 bits (99), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 88 LVIHDDLDLDFGTLRLKTGGGDA----GHNGLKSISEKC-GKNYKRLRIGIGRPP--DTA 140
+++HD+L+ G +R+K GG + GH GL SI E GK R+GIGRP +
Sbjct: 67 VILHDELEAPLGKVRVKRGGPETASLRGHRGLTSIMESLRGKGLHPPRVGIGRPSTRNRG 126
Query: 141 HIIRHVLGNFSSPE----RYFLLPIIDNIA 166
+ +VL ++ E R P++D +A
Sbjct: 127 DVADYVLTEMNAIELAAVRAAAGPVLDILA 156
>gi|313611261|gb|EFR86032.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL F2-208]
Length = 78
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 111 GHNGLKSISEKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
GHNG+KSI + + + R+R+G+ RP +I +VLG+F E+ ++ I A ++
Sbjct: 2 GHNGMKSIIQHVKTQEFNRIRVGVSRPL-KGEVIHYVLGDFPKAEQPEIIAAIQKSADAI 60
Query: 170 PLLAKREDVSFLN 182
AK + +N
Sbjct: 61 EDFAKTPFIEVMN 73
>gi|331226414|ref|XP_003325877.1| hypothetical protein PGTG_07079 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309304867|gb|EFP81458.1| hypothetical protein PGTG_07079 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 252
Score = 40.8 bits (94), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 58 LIKPQTFMNLSG---QSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLK---TGGGDAG 111
L+KP+ MN+SG QS ++ P ++IHD+LDL +RLK G
Sbjct: 107 LLKPRAAMNISGPIVQSYHSQLSKSGHPT--KLIIIHDELDLKPLVVRLKRPPQSSKHKG 164
Query: 112 HNGLKSI----SEKCGKNYKRLRIGIGR-----PPDTAHIIRHVLGNFSSPE 154
HNGL+S+ +N + IG+GR D + R VL + PE
Sbjct: 165 HNGLRSVFASLRAYSPQNLYTIGIGVGRDVSNPSKDPGDVGRWVLSPLTRPE 216
>gi|207093637|ref|ZP_03241424.1| peptidyl-tRNA hydrolase [Helicobacter pylori HPKX_438_AG0C1]
Length = 43
Score = 39.7 bits (91), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 73 LEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
L NFYK+ L L++HDDLDL G +R K GGG+
Sbjct: 1 LSAKNFYKIKEL---LIVHDDLDLPLGVVRFKNGGGNG 35
>gi|269214290|ref|ZP_06158479.1| aminoacyl-tRNA hydrolase [Neisseria lactamica ATCC 23970]
gi|269210126|gb|EEZ76581.1| aminoacyl-tRNA hydrolase [Neisseria lactamica ATCC 23970]
Length = 69
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAE 45
+V GLGNPG EY + RHN GF +D + WK F E
Sbjct: 7 MVVGLGNPGKEYEQTRHNAGFWFLDELAW-----KWKASFKEE 44
>gi|68466705|ref|XP_722548.1| hypothetical protein CaO19.1502 [Candida albicans SC5314]
gi|46444531|gb|EAL03805.1| hypothetical protein CaO19.1502 [Candida albicans SC5314]
Length = 255
Score = 38.9 bits (89), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTIL-IKP 61
I +GNPG RH++G + R+ + K+ + +D I+ IK
Sbjct: 10 IFFSIGNPG---PITRHSVGHFMLKRLMESSSTTSIKQLSNYSSYSLSVDSFNNIIYIKS 66
Query: 62 QTFMNLSGQSL------LEVMNFYK----------LPNLENYLVIHDDLDLDFGTLRLKT 105
T+MN S ++ E +F K + + ++++DD + + GT++LK
Sbjct: 67 NTYMNESSKAWNKFKLSKEYRSFIKEQDQDQDQDHHDQIVSVIILYDDFENNLGTIKLKQ 126
Query: 106 ----GGGDAGHNGLKSI---------SEKCGKNYKRLRIGIGRPPD---TAHIIRH-VLG 148
+ HNGLK++ S G+ L IGIG P+ + I+R +L
Sbjct: 127 FKKKSNNNESHNGLKNLKLSMIDGNSSNATGEAIYLLGIGIGPKPNNNPSGEIMRQWILS 186
Query: 149 NFS-SPERYFL 158
F+ E+Y L
Sbjct: 187 PFNKQSEKYKL 197
>gi|218197382|gb|EEC79809.1| hypothetical protein OsI_21248 [Oryza sativa Indica Group]
gi|222632792|gb|EEE64924.1| hypothetical protein OsJ_19784 [Oryza sativa Japonica Group]
Length = 125
Score = 38.5 bits (88), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 61 PQTFMNLS--GQSLLEV---MNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
P +NL+ G++ +V +YKLP L LV D DL G LRL+ GG HNG
Sbjct: 5 PTFILNLAKLGEAKTQVGPLAAYYKLP-LNRVLVAFDGTDLPCGILRLQPKGGFGRHNGS 63
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNF--SSPER 155
C GIG PP VL F +S ER
Sbjct: 64 VDFVTMCFNEVICHSKGIGCPPGQMDPKAFVLQKFNKTSLER 105
>gi|222632463|gb|EEE64595.1| hypothetical protein OsJ_19447 [Oryza sativa Japonica Group]
Length = 90
Score = 38.5 bits (88), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE 48
+++ GLGNPG Y RHN+GF ID I K+F + + +
Sbjct: 41 WLLIGLGNPGRMYKGTRHNVGFEMIDAIAEAEGISVSSKQFKSMVGK 87
>gi|213615579|ref|ZP_03371405.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 85
Score = 38.5 bits (88), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 111 GHNGLKSISEKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL 159
GHNGLK I K G N + RLR+GIG P D ++ VLG E+ L
Sbjct: 1 GHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKIKL 51
>gi|51854332|gb|AAU10712.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 154
Score = 38.1 bits (87), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 78 FYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPP 137
+YKLP L LV D DL G LRL+ GG HNG C GIG PP
Sbjct: 36 YYKLP-LNRVLVAFDGTDLPCGILRLQPKGGFGRHNGSVDFVTMCFNEVICHSKGIGCPP 94
Query: 138 DTAHIIRHVLGNFS 151
VL F+
Sbjct: 95 GQMDPKAFVLQKFN 108
>gi|115438418|ref|XP_001218061.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114188876|gb|EAU30576.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 292
Score = 37.7 bits (86), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 25/79 (31%)
Query: 83 NLENYLVI-HDDLDLDFGTLRLKTGGGDA----GHNGLKSISE--KCGKNYK-------- 127
LE LVI HD+L+ G +R+K GG +A GH GL S+ E K K Y
Sbjct: 165 QLEPTLVILHDELEAPLGKVRVKRGGPEAASLRGHRGLISVMEQLKAKKLYPPAQTRGGG 224
Query: 128 ----------RLRIGIGRP 136
R+ +GIGRP
Sbjct: 225 GGGAGGLSVVRIGVGIGRP 243
>gi|258575097|ref|XP_002541730.1| predicted protein [Uncinocarpus reesii 1704]
gi|237901996|gb|EEP76397.1| predicted protein [Uncinocarpus reesii 1704]
Length = 160
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 28/38 (73%), Gaps = 3/38 (7%)
Query: 86 NYLVIHDDLDLDFGTLRLKTGGGD---AGHNGLKSISE 120
+ +++HD+L+L G LR++ GG + GHNG+KS+++
Sbjct: 36 SLILVHDELELAPGELRIRRGGAELSARGHNGIKSVTQ 73
>gi|238881992|gb|EEQ45630.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 255
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTIL-IKP 61
I +GNPG RH++G + R+ + K+ + +D I+ IK
Sbjct: 10 IFFSIGNPG---PITRHSVGHFMLKRLMESSSTTSIKQLSNYSSYSLSVDSFNNIIYIKS 66
Query: 62 QTFMNLSGQSL------LEVMNFYK----------LPNLENYLVIHDDLDLDFGTLRLKT 105
T+MN S ++ E +F K + + ++++DD + + GT++LK
Sbjct: 67 NTYMNESSKAWNKFKLSKEYRSFIKEQDQDQDQDHHDQIVSVIILYDDFENNLGTIKLKQ 126
Query: 106 ----GGGDAGHNGLKSI---------SEKCGKNYKRLRIGIGRPPD---TAHIIRH-VLG 148
+ HNGLK++ + G+ L IGIG P+ + I+R +L
Sbjct: 127 FKKKSNNNESHNGLKNLKLSMIDGNSNNATGEAMYLLGIGIGPKPNNNPSGEIMRQWILS 186
Query: 149 NFS-SPERYFL 158
F+ E+Y L
Sbjct: 187 PFNKQSEKYKL 197
>gi|68466990|ref|XP_722410.1| hypothetical protein CaO19.9078 [Candida albicans SC5314]
gi|46444384|gb|EAL03659.1| hypothetical protein CaO19.9078 [Candida albicans SC5314]
Length = 255
Score = 37.4 bits (85), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTIL-IKP 61
I +GNPG RH++G + R+ + K+ + +D I+ IK
Sbjct: 10 IFFSIGNPG---PITRHSVGHFMLKRLMESSSTTSIKQLSNYSSYSLSVDSFNNIIYIKS 66
Query: 62 QTFMNLSGQSL------LEVMNFYK----------LPNLENYLVIHDDLDLDFGTLRLKT 105
T+MN S ++ E +F K + + ++++DD + + GT++LK
Sbjct: 67 NTYMNESSKAWNKFKLSKEYRSFIKEQDQDQDQDHHDQIVSVIILYDDFENNLGTIKLKQ 126
Query: 106 ----GGGDAGHNGLKSI---------SEKCGKNYKRLRIGIGRPPD---TAHIIRH-VLG 148
+ HNGLK++ + G+ L IGIG P+ + I+R +L
Sbjct: 127 FKKKSNNNESHNGLKNLKLSMIDGNSNNATGEAIYLLGIGIGPKPNNNPSGEIMRQWILS 186
Query: 149 NFS-SPERYFL 158
F+ E+Y L
Sbjct: 187 PFNKQSEKYKL 197
>gi|294671341|ref|ZP_06736192.1| hypothetical protein NEIELOOT_03050 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291306973|gb|EFE48216.1| hypothetical protein NEIELOOT_03050 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 61
Score = 37.0 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI 29
++ GLGNPG EY RHN GF +D +
Sbjct: 5 LIVGLGNPGTEYEHTRHNAGFWFLDEL 31
>gi|226294342|gb|EEH49762.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 282
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 13/109 (11%)
Query: 86 NYLVIHDDLDLDFGTLRLKTGGGD---AGHNGLKSISEKCGKNYKRLRI-GIGRPPDTAH 141
N +++HDDL+L G L ++ GG GHNG+KS+ K G G+ T
Sbjct: 140 NLILLHDDLELSPGKLSVRRGGASLSARGHNGVKSVVNSLVKAGMLASTRGAGKEKGTGV 199
Query: 142 IIRHVLGNFSS-----PERYFLLPIIDNIARSLPLLAKREDVSFLNHIV 185
+ +LG SS P R+ L I I R A RE +++
Sbjct: 200 GMSGILGAGSSASAFDPTRFQLTRIGVGIGRP----ASREPAEVAEYVL 244
>gi|320162435|ref|YP_004175660.1| DNA polymerase I [Anaerolinea thermophila UNI-1]
gi|319996289|dbj|BAJ65060.1| DNA polymerase I [Anaerolinea thermophila UNI-1]
Length = 938
Score = 36.2 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 37 AWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDL 96
A K+ F +I G D L+ L+ + +NL+G L E +F + +++ YL I D +
Sbjct: 124 AVKQGFGVKIITGDRDLLQ--LVDERIAVNLAGSKLSEARDFVRQEDVQAYLGIRPDQVV 181
Query: 97 DFGTLRLKTGGGDAGHN--GLKSISEKCG----KNYKRL 129
DF L GD N G++ I EK K+Y L
Sbjct: 182 DFKAL-----AGDPSDNIPGVRGIGEKTALALLKDYAHL 215
>gi|195108939|ref|XP_001999050.1| GI23288 [Drosophila mojavensis]
gi|193915644|gb|EDW14511.1| GI23288 [Drosophila mojavensis]
Length = 181
Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 80 KLPNLENYLVIHDDLDLD-----FGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIG 132
K+ N+ NYL H DL LD FGT++ + + ++++KCG Y +R+G
Sbjct: 106 KVANMVNYLDFHHDLSLDYPKKNFGTMKCDS--------YMAAVNKKCGNTYSTIRMG 155
>gi|169842241|ref|ZP_02875346.1| hypothetical protein cdivTM_34062 [candidate division TM7
single-cell isolate TM7a]
Length = 34
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 101 LRLKTGGGDAGHNGLKSISEKCGKNYKRLRI 131
LR++ G DAG+NG+KS++ GK++ RLRI
Sbjct: 4 LRIRLSGRDAGNNGVKSLNAHLGKDFARLRI 34
>gi|240277276|gb|EER40785.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 301
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 86 NYLVIHDDLDLDFGTLRLKTGGGD---AGHNGLKSI 118
N +++HDDL+L G L ++ GG GHNG+KS+
Sbjct: 169 NLILLHDDLELSPGKLSVRRGGASLSARGHNGIKSV 204
>gi|225562189|gb|EEH10469.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 305
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 86 NYLVIHDDLDLDFGTLRLKTGGGD---AGHNGLKSI 118
N +++HDDL+L G L ++ GG GHNG+KS+
Sbjct: 173 NLILLHDDLELSPGKLSVRRGGASLSARGHNGIKSV 208
>gi|325091808|gb|EGC45118.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 303
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 86 NYLVIHDDLDLDFGTLRLKTGGGD---AGHNGLKSI 118
N +++HDDL+L G L ++ GG GHNG+KS+
Sbjct: 171 NLILLHDDLELSPGKLSVRRGGASLSARGHNGIKSV 206
>gi|239608962|gb|EEQ85949.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 285
Score = 35.8 bits (81), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 86 NYLVIHDDLDLDFGTLRLKTGGGD---AGHNGLKSI 118
N +++HDDL+L G L ++ GG GHNG+KS+
Sbjct: 154 NLILLHDDLELSPGKLSVRRGGASLSARGHNGIKSV 189
>gi|86144309|ref|ZP_01062641.1| Flp pilus assembly protein TadG [Vibrio sp. MED222]
gi|218676258|ref|YP_002395077.1| putative Flp pilus assembly protein TadG [Vibrio splendidus LGP32]
gi|85837208|gb|EAQ55320.1| Flp pilus assembly protein TadG [Vibrio sp. MED222]
gi|218324526|emb|CAV26007.1| putative Flp pilus assembly protein TadG [Vibrio splendidus LGP32]
Length = 438
Score = 35.8 bits (81), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 26/117 (22%)
Query: 28 RIHSFHFFPAWKKKF---HAEISEGQLDGLRTILIKPQTFMNL----SGQSLLEV----- 75
R++++ ++ +W+KK+ +A S G +R + KP+ + + G S EV
Sbjct: 216 RVNAYGYYGSWRKKYAYNYARSSPGTT--VRRMFDKPKLYNEILEPKRGMSRYEVERLHT 273
Query: 76 --------MNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK 124
FY +P E+Y D+ +L+ GGG + NG+ + +++ K
Sbjct: 274 HNVNFAKYYKFYDIPLTEDY----DEFRSQLMNTKLQAGGGTSSWNGIIAAAQEANK 326
>gi|261189472|ref|XP_002621147.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239591724|gb|EEQ74305.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
Length = 285
Score = 35.8 bits (81), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 86 NYLVIHDDLDLDFGTLRLKTGGGD---AGHNGLKSI 118
N +++HDDL+L G L ++ GG GHNG+KS+
Sbjct: 154 NLILLHDDLELSPGKLSVRRGGASLSARGHNGIKSV 189
>gi|327354020|gb|EGE82877.1| hypothetical protein BDDG_05821 [Ajellomyces dermatitidis ATCC
18188]
Length = 285
Score = 35.8 bits (81), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 86 NYLVIHDDLDLDFGTLRLKTGGGD---AGHNGLKSI 118
N +++HDDL+L G L ++ GG GHNG+KS+
Sbjct: 154 NLILLHDDLELSPGKLSVRRGGASLSARGHNGIKSV 189
>gi|255724094|ref|XP_002546976.1| predicted protein [Candida tropicalis MYA-3404]
gi|240134867|gb|EER34421.1| predicted protein [Candida tropicalis MYA-3404]
Length = 217
Score = 35.8 bits (81), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 18/123 (14%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
I +GNPG RH++G + + I SF + P KK IS +K
Sbjct: 7 IFFSIGNPG---PITRHSVGHLMLKHILSFIPYTPGLIKKSIYSISSTD----SITYLKS 59
Query: 62 QTFMNLSGQSLLEVMNFYKLPN--LEN----YLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
++MN S +S N +K+ N L N +I+DD + + G +R+ + HNGL
Sbjct: 60 NSYMNESFKS----WNKFKIDNKRLINAGPIIFIIYDDFEKNLGNIRISKFKKNESHNGL 115
Query: 116 KSI 118
K +
Sbjct: 116 KGL 118
>gi|225685031|gb|EEH23315.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 276
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 13/109 (11%)
Query: 86 NYLVIHDDLDLDFGTLRLKTGGGD---AGHNGLKSISEKCGKNYKRLRI-GIGRPPDTAH 141
N +++HDDL+L G L ++ GG GHNG+KS+ K G G+ T
Sbjct: 140 NLVLLHDDLELSPGKLSVRRGGASLSARGHNGVKSVVNSLVKAGMLASTRGPGKEKGTGV 199
Query: 142 IIRHVLGNFSS-----PERYFLLPIIDNIARSLPLLAKREDVSFLNHIV 185
+ +LG SS P R+ L I I R A RE +++
Sbjct: 200 GMSGILGAGSSASAFDPTRFQLTRIGVGIGRP----ASREPAEVAEYVL 244
>gi|153217684|ref|ZP_01951365.1| peptidyl-tRNA hydrolase [Vibrio cholerae 1587]
gi|124113371|gb|EAY32191.1| peptidyl-tRNA hydrolase [Vibrio cholerae 1587]
Length = 93
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 115 LKSISEKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LK K G N + RLR+GIG P + +VLG + E+ L +D R L +L
Sbjct: 16 LKDTISKLGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEIL 75
Query: 173 AK 174
K
Sbjct: 76 MK 77
>gi|295660499|ref|XP_002790806.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
gi|226281359|gb|EEH36925.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
Length = 280
Score = 35.0 bits (79), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 86 NYLVIHDDLDLDFGTLRLKTGGGD---AGHNGLKSI 118
N +++HDDL+L G L ++ GG GHNG+KS+
Sbjct: 144 NLILLHDDLELSPGKLSVRRGGASLSARGHNGIKSV 179
>gi|241950859|ref|XP_002418152.1| peptidyl-tRNA hydrolase, putative [Candida dubliniensis CD36]
gi|223641491|emb|CAX43452.1| peptidyl-tRNA hydrolase, putative [Candida dubliniensis CD36]
Length = 242
Score = 34.7 bits (78), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTIL-IKP 61
I +GNPG RH++G + R+ F + K+ + + +D L I+ IK
Sbjct: 9 IFFSIGNPG---PITRHSVGHFMLKRLMEFSN-SSIKQLHNYSLYSLSIDSLNNIIYIKS 64
Query: 62 QTFMNLSGQ------SLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRL-------KTGGG 108
T+MN S + S E +F K + +V++DD + + GT++L
Sbjct: 65 NTYMNESSKAWNKFKSSKEYKSFLK-QQVVTVIVLYDDFENNLGTIKLKQFKKNKSNKNN 123
Query: 109 DAGHNGLKSIS-EKCGKNYKR-----LRIGIGRPPDT 139
+ HNGLK + N+ L IGIG P +
Sbjct: 124 NESHNGLKDLKFAMIDNNFNDETIYLLGIGIGPKPSS 160
>gi|169765233|ref|XP_001817088.1| peptidyl-tRNA hydrolase [Aspergillus oryzae RIB40]
gi|83764942|dbj|BAE55086.1| unnamed protein product [Aspergillus oryzae]
Length = 257
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 23/72 (31%)
Query: 88 LVIHDDLDLDFGTLRLKTGGGDA----GHNGLKSISEKC-------------------GK 124
+++HD+L+ G +R+K GG + GH GL SI E G
Sbjct: 140 VILHDELEAPLGKVRVKRGGPETASLRGHRGLTSIMESLRGKGLHPPRTRPGETRSHEGL 199
Query: 125 NYKRLRIGIGRP 136
+ R+ +GIGRP
Sbjct: 200 SVLRIGVGIGRP 211
Searching..................................................done
Results from round 2
>gi|254780225|ref|YP_003064638.1| peptidyl-tRNA hydrolase [Candidatus Liberibacter asiaticus str.
psy62]
gi|254039902|gb|ACT56698.1| peptidyl-tRNA hydrolase [Candidatus Liberibacter asiaticus str.
psy62]
Length = 189
Score = 293 bits (752), Expect = 6e-78, Method: Composition-based stats.
Identities = 189/189 (100%), Positives = 189/189 (100%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK
Sbjct: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE
Sbjct: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF
Sbjct: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Query: 181 LNHIVSVRK 189
LNHIVSVRK
Sbjct: 181 LNHIVSVRK 189
>gi|159043499|ref|YP_001532293.1| peptidyl-tRNA hydrolase [Dinoroseobacter shibae DFL 12]
gi|189038289|sp|A8LRY5|PTH_DINSH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157911259|gb|ABV92692.1| aminoacyl-tRNA hydrolase [Dinoroseobacter shibae DFL 12]
Length = 235
Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats.
Identities = 82/184 (44%), Positives = 115/184 (62%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D+I + H F W+ KF +++EG+ + L+K
Sbjct: 1 MKLFVGLGNPGPKYARNRHNIGFMALDQIAADHGFSPWRTKFSGQMAEGKFGSTKVTLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN SGQS+ E M F+KL E+ +V HD+LDL G R+KTGGG AGHNGL+SI
Sbjct: 61 PETFMNRSGQSVGEAMRFFKLEP-EDVIVFHDELDLAPGKCRVKTGGGHAGHNGLRSIHG 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y+R+R+GIG P + +VL +F+ E +L ++ I P LA + F
Sbjct: 120 HIGPEYQRVRLGIGHPGHKDRVSGYVLSDFAKAEAAWLDDLLRGIGDGAPELAAGDTGRF 179
Query: 181 LNHI 184
+N +
Sbjct: 180 MNAV 183
>gi|254475939|ref|ZP_05089325.1| peptidyl-tRNA hydrolase [Ruegeria sp. R11]
gi|214030182|gb|EEB71017.1| peptidyl-tRNA hydrolase [Ruegeria sp. R11]
Length = 236
Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats.
Identities = 87/185 (47%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D+I H F WK KF A++SEG L G + +L+K
Sbjct: 1 MKLFVGLGNPGAKYAGNRHNIGFMALDQIADDHGFSPWKSKFQAQLSEGVLGGEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + +V+HD+LDL G R+K GGG AGHNGL+SI
Sbjct: 61 PQTFMNLSGQSVGEAMRFYKLTPA-DVIVLHDELDLAPGKARVKQGGGHAGHNGLRSIHS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+GIG P + +VL +F+ + +L ++ I+ LAK + F
Sbjct: 120 HIGADYGRVRLGIGHPGHKDAVAGYVLRDFAKADEVWLDDLLRGISDGAASLAKGDGGKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|254486294|ref|ZP_05099499.1| peptidyl-tRNA hydrolase [Roseobacter sp. GAI101]
gi|214043163|gb|EEB83801.1| peptidyl-tRNA hydrolase [Roseobacter sp. GAI101]
Length = 238
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 80/185 (43%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +D I + H F WK K +SEG+L R +L+K
Sbjct: 1 MKLIVGLGNPGAKYARNRHNIGFMALDMIAADHGFAPWKSKHQGLVSEGRLGSERAVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ M FYKL + +V+HD++DL ++ KTGGG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVQAAMRFYKLEP-SDVIVLHDEIDLAPAKVKCKTGGGHAGHNGLRSIHT 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F+ + +L ++ I+ P LA+ + F
Sbjct: 120 HIGPDYHRVRLGVGHPGHKDAVPGYVLRDFAKADEAWLDDVLRGISDGAPELARGDTAKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|86136041|ref|ZP_01054620.1| peptidyl-tRNA hydrolase [Roseobacter sp. MED193]
gi|85826915|gb|EAQ47111.1| peptidyl-tRNA hydrolase [Roseobacter sp. MED193]
Length = 248
Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats.
Identities = 85/184 (46%), Positives = 118/184 (64%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +D I S H F WK KF A+I EG L G++ +L+K
Sbjct: 1 MKLLVGLGNPGAKYARNRHNIGFMALDEIASDHGFSPWKTKFQAQICEGTLGGVKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + ++ V+HD+LDL G R+K GGG AGHNGL+S+
Sbjct: 61 PQTFMNLSGQSVGEAMRFYKLTS-QDVTVLHDELDLAPGKCRVKQGGGHAGHNGLRSLHS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F + +L ++ I+ LA + F
Sbjct: 120 HIGADYGRVRLGVGHPGHKDAVAGYVLRDFPKADEAWLDDLLRGISDGAVALAAGDSGKF 179
Query: 181 LNHI 184
+N +
Sbjct: 180 MNAV 183
>gi|254464216|ref|ZP_05077627.1| peptidyl-tRNA hydrolase [Rhodobacterales bacterium Y4I]
gi|206685124|gb|EDZ45606.1| peptidyl-tRNA hydrolase [Rhodobacterales bacterium Y4I]
Length = 235
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 89/185 (48%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D+I S H F WK KF A ISEG L G + +L+K
Sbjct: 9 MKLFVGLGNPGPKYERNRHNIGFMALDQIASDHGFSPWKSKFQALISEGTLGGEKVLLLK 68
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + +V+HD+LDL G R+K GGG AGHNGL+SI
Sbjct: 69 PQTFMNLSGQSVGEAMRFYKLTPA-DVVVLHDELDLAPGKARMKQGGGHAGHNGLRSIHS 127
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+GIG P + +VL +F + +L ++ I+ LAK F
Sbjct: 128 HIGADYARVRLGIGHPGHKDAVAGYVLRDFPKTDEGWLDDLMRGISDGAAELAKGNGGKF 187
Query: 181 LNHIV 185
+N +
Sbjct: 188 MNAVA 192
>gi|312114467|ref|YP_004012063.1| peptidyl-tRNA hydrolase [Rhodomicrobium vannielii ATCC 17100]
gi|311219596|gb|ADP70964.1| peptidyl-tRNA hydrolase [Rhodomicrobium vannielii ATCC 17100]
Length = 713
Score = 271 bits (695), Expect = 2e-71, Method: Composition-based stats.
Identities = 85/189 (44%), Positives = 130/189 (68%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +D + + F WKK+F ++EGQ+ R IL+K
Sbjct: 1 MKLIVGLGNPGEKYAGNRHNIGFMAVDEMARGYGFAPWKKRFQGFVAEGQIGLQRCILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E M FYK+ + + +VIHD++DL+ G +RLKTGGG+AGHNGLKSI+
Sbjct: 61 PATYMNESGRAVGEAMRFYKIA-IGDVIVIHDEIDLEPGKIRLKTGGGNAGHNGLKSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+R+G+G P D A + +VL +F+ + +L+P+++ +AR + L ++ SF
Sbjct: 120 HVGNDYRRVRLGVGHPGDKALVANYVLHDFAKADNEWLVPVLEGVARGMSNLVDGKEASF 179
Query: 181 LNHIVSVRK 189
L+ RK
Sbjct: 180 LSEAARGRK 188
>gi|126739657|ref|ZP_01755349.1| Aminoacyl-tRNA hydrolase [Roseobacter sp. SK209-2-6]
gi|126719303|gb|EBA16013.1| Aminoacyl-tRNA hydrolase [Roseobacter sp. SK209-2-6]
Length = 232
Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats.
Identities = 84/185 (45%), Positives = 113/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +NRHNIGFM +D+I S H F WK KF EI EG L G + + +K
Sbjct: 1 MKLFVGLGNPGQKYAQNRHNIGFMALDQIASDHGFSPWKSKFQGEICEGNLTGNKVLSLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ E + FYKL + +V HD+LDL G R K GGG AGHNGL+SI
Sbjct: 61 PQTFMNLSGQAVGEAIRFYKLTTA-DVVVFHDELDLAPGKCRFKQGGGHAGHNGLRSIHS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+GIG P + +VL +F + +L ++ I+ LA + F
Sbjct: 120 HIGADYARVRLGIGHPGHKDAVSGYVLRDFPKADANWLDDLLRGISDGAAQLAAGDSGKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|163739060|ref|ZP_02146473.1| peptidyl-tRNA hydrolase [Phaeobacter gallaeciensis BS107]
gi|161387865|gb|EDQ12221.1| peptidyl-tRNA hydrolase [Phaeobacter gallaeciensis BS107]
Length = 252
Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats.
Identities = 87/185 (47%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D+I S H F WK KF A+ISEG L + +L+K
Sbjct: 1 MKLFVGLGNPGAKYAGNRHNIGFMALDQIASDHGFSPWKSKFQAQISEGVLGRTKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + V+HD+LDL G R+K GGG AGHNGL+SI
Sbjct: 61 PQTFMNLSGQSVGEAMRFYKLTPA-DVTVLHDELDLAPGKARVKQGGGHAGHNGLRSIHS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+GIG P + +VL +F+ + +L ++ I+ LA + F
Sbjct: 120 HIGADYGRVRLGIGHPGHKDAVAGYVLRDFAKADEAWLDDLMRGISDGAAQLAAGDGGKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|110634507|ref|YP_674715.1| peptidyl-tRNA hydrolase [Mesorhizobium sp. BNC1]
gi|119390958|sp|Q11GC5|PTH_MESSB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110285491|gb|ABG63550.1| peptidyl-tRNA hydrolase [Chelativorans sp. BNC1]
Length = 239
Score = 269 bits (690), Expect = 9e-71, Method: Composition-based stats.
Identities = 86/183 (46%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y +RHN+GFM D I H F W KKF A ++EG++ + +L+K
Sbjct: 1 MLLLAGLGNPGPQYQNHRHNVGFMAADAIFRRHSFSPWSKKFSALVAEGRVGTEKLLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ E M FYKL + +V +D+LDL G +R+K G G GHNG+KSI
Sbjct: 61 PQTFMNLSGQAVGEAMRFYKL-QPSDIIVFYDELDLAPGKVRVKRGSGSGGHNGIKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG++Y+R+RIGIG P D A + HVLG+F+ + +L P++D +A ++ LL ++ F
Sbjct: 120 HCGQDYRRVRIGIGHPGDKARVTPHVLGDFAKADHAWLDPLLDAMAENVDLLITGDESGF 179
Query: 181 LNH 183
+N
Sbjct: 180 MNK 182
>gi|163744227|ref|ZP_02151587.1| peptidyl-tRNA hydrolase [Oceanibulbus indolifex HEL-45]
gi|161381045|gb|EDQ05454.1| peptidyl-tRNA hydrolase [Oceanibulbus indolifex HEL-45]
Length = 235
Score = 269 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 113/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +DRI H F WK KF +SEG+ R +L+K
Sbjct: 1 MKLIVGLGNPGAKYARNRHNIGFMALDRIAEDHGFAPWKGKFQGSVSEGRFGSDRAVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN SGQS+ M FYK+ + + +V HD+LDL G ++ KTGGG AGHNGL+SI
Sbjct: 61 PETFMNNSGQSVQVAMKFYKI-DASDVIVFHDELDLAPGKVKCKTGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y R+R+GIG P + +VL +F + +L ++ I+ LA+ + F
Sbjct: 120 HIGAEYDRVRLGIGHPGHKDAVAGYVLRDFPKADEGWLDDVLRGISDGAADLARGDTGRF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|259415677|ref|ZP_05739598.1| peptidyl-tRNA hydrolase [Silicibacter sp. TrichCH4B]
gi|259348907|gb|EEW60669.1| peptidyl-tRNA hydrolase [Silicibacter sp. TrichCH4B]
Length = 243
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 83/185 (44%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D+I S H F WK KF A++SEG L G + IL+K
Sbjct: 1 MKLFVGLGNPGAKYAGNRHNIGFMALDQIASDHGFSPWKSKFQAQMSEGTLTGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SGQS+ E + F+KL + +V HD+LDL G R+K GGG AGHNGL+SI
Sbjct: 61 PQTFMNNSGQSVGEALRFFKLTPA-DVVVFHDELDLAPGKCRVKQGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F ++ +L ++ ++ LA F
Sbjct: 120 HIGADYARVRLGVGHPGHKDAVAGYVLRDFPKADQGWLDDLLRGLSDGAHSLATGNSGRF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|163847223|ref|YP_001635267.1| peptidyl-tRNA hydrolase [Chloroflexus aurantiacus J-10-fl]
gi|222525064|ref|YP_002569535.1| peptidyl-tRNA hydrolase [Chloroflexus sp. Y-400-fl]
gi|189038282|sp|A9WBS1|PTH_CHLAA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783861|sp|B9LE93|PTH_CHLSY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|163668512|gb|ABY34878.1| Aminoacyl-tRNA hydrolase [Chloroflexus aurantiacus J-10-fl]
gi|222448943|gb|ACM53209.1| Aminoacyl-tRNA hydrolase [Chloroflexus sp. Y-400-fl]
Length = 188
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 110/186 (59%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG Y RHNIGF +D + H ++ +++++EG + G R +L K
Sbjct: 1 MWLIVGLGNPGERYARTRHNIGFRSVDTLAERHGLTFRPQRANSQLAEGNIYGQRVVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQ+++ + N+YK+ LVI+DDLDL F LR++ G HNG++SI
Sbjct: 61 PQTYMNLSGQAVVALCNWYKIDPARELLVIYDDLDLPFAKLRIRERGSAGTHNGMRSIVA 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + RLR+GIG+PP +VLG F+ E L ++ IA ++ ++ + +
Sbjct: 121 QLGTTEFPRLRVGIGQPPGKMDAADYVLGRFTPDEEAALPDLLGRIADAVEVILREGLTT 180
Query: 180 FLNHIV 185
+N
Sbjct: 181 AMNRYN 186
>gi|83953527|ref|ZP_00962249.1| peptidyl-tRNA hydrolase [Sulfitobacter sp. NAS-14.1]
gi|83842495|gb|EAP81663.1| peptidyl-tRNA hydrolase [Sulfitobacter sp. NAS-14.1]
Length = 243
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 78/185 (42%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +DRI H F WK K + EG+ R +L+K
Sbjct: 1 MKLIVGLGNPGAKYAGNRHNIGFMALDRIAQDHGFAGWKTKHNGLTVEGRFGADRVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN SGQS+ M F+KL + +V+HD++DL G ++ KTGGG AGHNGL+SI
Sbjct: 61 PETFMNNSGQSVQSAMRFHKLEPA-DVIVLHDEIDLAPGKVKCKTGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F+ E+ +L ++ I+ LA+ + F
Sbjct: 120 HIGPDYDRVRLGVGHPGHKDAVPGYVLRDFAKAEQDWLDDVLRGISDGAAELARGDTAKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|85707108|ref|ZP_01038196.1| peptidyl-tRNA hydrolase [Roseovarius sp. 217]
gi|85668394|gb|EAQ23267.1| peptidyl-tRNA hydrolase [Roseovarius sp. 217]
Length = 228
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 86/187 (45%), Positives = 114/187 (60%), Gaps = 1/187 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +DRI H F W+ KF +SEG L + IL+K
Sbjct: 1 MQLFVGLGNPGAKYENNRHNIGFMALDRIADEHGFGPWRSKFQGMVSEGDLGDDKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E + FYKL + V HD+LDL G LR KTGGG AGHNGL+S+ +
Sbjct: 61 PMTFMNLSGQSVGEALRFYKLTPA-DVTVFHDELDLAPGKLRCKTGGGHAGHNGLRSLHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+GIG P + +VL +F+ E +L ++ +A+ P LA + F
Sbjct: 120 HIGETYGRVRLGIGHPGHKDRVAHYVLQDFAKSETDWLDDLLRGVAKGAPWLALGKPDRF 179
Query: 181 LNHIVSV 187
N +
Sbjct: 180 QNAVAQA 186
>gi|49473973|ref|YP_032015.1| peptidyl-tRNA hydrolase [Bartonella quintana str. Toulouse]
gi|68052956|sp|Q6G0F9|PTH_BARQU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|49239476|emb|CAF25828.1| Peptidyl-tRNA hydrolase [Bartonella quintana str. Toulouse]
Length = 193
Score = 267 bits (683), Expect = 6e-70, Method: Composition-based stats.
Identities = 99/189 (52%), Positives = 135/189 (71%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y NRHNIGFM ID I+ F W KKF AEIS G +DG +T LIK
Sbjct: 1 MWLIAGLGNPGLQYQNNRHNIGFMVIDAIYQSFSFSPWSKKFQAEISNGLIDGEKTFLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ EV+ FYKL +L+N++VI D+LDL G +R+KT GG+ GHNG+KSI
Sbjct: 61 PQTFMNLSGQAIGEVLRFYKL-DLKNFIVICDELDLPPGKVRVKTAGGNNGHNGIKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG +Y R+R+GIG P + +HVLGNF+ ++ +L P++D IA+++ LL K + F
Sbjct: 120 HCGTDYCRVRLGIGHPGSKELVHQHVLGNFTKSDQEWLSPLLDAIAKNIALLIKGDRCLF 179
Query: 181 LNHIVSVRK 189
++ I K
Sbjct: 180 MDTISQATK 188
>gi|83943887|ref|ZP_00956344.1| peptidyl-tRNA hydrolase [Sulfitobacter sp. EE-36]
gi|83845134|gb|EAP83014.1| peptidyl-tRNA hydrolase [Sulfitobacter sp. EE-36]
Length = 243
Score = 266 bits (682), Expect = 9e-70, Method: Composition-based stats.
Identities = 78/185 (42%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +DRI H F WK K + EG+ R +L+K
Sbjct: 1 MKLIVGLGNPGAKYAGNRHNIGFMALDRIAQDHGFAGWKTKHNGLTVEGRFGADRVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN SGQS+ M F+KL + +V+HD++DL G ++ KTGGG AGHNGL+SI
Sbjct: 61 PETFMNNSGQSVQSAMRFHKLEPA-DVIVLHDEIDLAPGKVKCKTGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F+ E+ +L ++ I+ LA+ + F
Sbjct: 120 HIGPDYDRVRLGVGHPGHKDAVPGYVLRDFAKAEQDWLDDVLRGISDGAAELARGDTAKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|255263630|ref|ZP_05342972.1| peptidyl-tRNA hydrolase [Thalassiobium sp. R2A62]
gi|255105965|gb|EET48639.1| peptidyl-tRNA hydrolase [Thalassiobium sp. R2A62]
Length = 224
Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats.
Identities = 87/185 (47%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D+I S H F W+ KF +SEG LDG + IL+K
Sbjct: 1 MKLFVGLGNPGAKYAHNRHNIGFMAMDQIASDHGFAPWRGKFQGSVSEGTLDGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M FYKL ++ V HD+LDL G LR+KT GG AGHNGL+SI +
Sbjct: 61 PETFMNLSGQSVGEAMRFYKL-TCDDVTVFHDELDLAPGKLRVKTAGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y R+R+GIG P + +VL +F+ E +L ++ + P LA+ + F
Sbjct: 120 HITPEYHRVRMGIGHPGHKDAVAGYVLRDFAKAEAGWLDDVLRGVGDGAPELARGDSGKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|298292448|ref|YP_003694387.1| peptidyl-tRNA hydrolase [Starkeya novella DSM 506]
gi|296928959|gb|ADH89768.1| peptidyl-tRNA hydrolase [Starkeya novella DSM 506]
Length = 203
Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats.
Identities = 79/187 (42%), Positives = 117/187 (62%), Gaps = 1/187 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I F W+++F EG++DG++ + +
Sbjct: 1 MLLFVGLGNPGSKYAGNRHNIGFMAVDAIARRQRFSPWRRRFQGAACEGEIDGVKVLCLL 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MN SG+++ E FYK+ L++ LV HD+LDL +R+K GGG+AGHNGL+SI+
Sbjct: 61 PETYMNESGRAVAEAQRFYKI-ELKDILVFHDELDLPPAKVRVKIGGGNAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG +Y R+R+GIG P D A + +VL +F+ ER ++ + D A LLA + F
Sbjct: 120 HCGNDYPRIRLGIGHPGDKALVHNYVLSDFAKAERGWVEAVCDGCADFAGLLATQRLDEF 179
Query: 181 LNHIVSV 187
N +
Sbjct: 180 QNRMHLF 186
>gi|149203916|ref|ZP_01880884.1| peptidyl-tRNA hydrolase [Roseovarius sp. TM1035]
gi|149142358|gb|EDM30403.1| peptidyl-tRNA hydrolase [Roseovarius sp. TM1035]
Length = 226
Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats.
Identities = 90/187 (48%), Positives = 118/187 (63%), Gaps = 1/187 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +DRI H F W+ KF +SEG LDG RT+L+K
Sbjct: 1 MQLFVGLGNPGAKYERNRHNIGFMALDRIAEDHGFGPWRSKFQGMVSEGTLDGARTVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E + FYKL + V HD+LDL G LR KTGGG AGHNGL+SI +
Sbjct: 61 PMTFMNLSGQSVGEAVRFYKLIPA-DVTVFHDELDLAPGKLRCKTGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+GIG P + ++VL +F+ E +L ++ I + P LA+ + F
Sbjct: 120 HIGEAYARVRLGIGHPGHKDRVAQYVLQDFAKSEADWLDDLLRGIGKGAPWLAQGKPDRF 179
Query: 181 LNHIVSV 187
N +
Sbjct: 180 QNAVAQA 186
>gi|110681038|ref|YP_684045.1| peptidyl-tRNA hydrolase [Roseobacter denitrificans OCh 114]
gi|119390998|sp|Q161I4|PTH_ROSDO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|109457154|gb|ABG33359.1| peptidyl-tRNA hydrolase [Roseobacter denitrificans OCh 114]
Length = 233
Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +RHNIGFM +DRI + H F AWK K +SEG+ R +L+K
Sbjct: 1 MKLIVGLGNPGPKYAGHRHNIGFMALDRIAADHGFGAWKDKHQGSLSEGRFGSDRAVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQS+ M FYKL E+ +V+HD++DL G ++ KTGGG AGHNGL+SI
Sbjct: 61 PLTFMNNSGQSVQAAMRFYKLEP-EDVIVLHDEIDLAPGKVKYKTGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y R+R+G+G P + +VL +F+ ++ +L ++ ++ P LA E F
Sbjct: 120 HIGPEYARVRLGVGHPGHKDRVPGYVLHDFAKADQDWLDDVLRGVSDGAPFLATTEAAKF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 SNAVA 184
>gi|149182809|ref|ZP_01861271.1| peptidyl-tRNA hydrolase [Bacillus sp. SG-1]
gi|148849476|gb|EDL63664.1| peptidyl-tRNA hydrolase [Bacillus sp. SG-1]
Length = 185
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF ID + P + KF + G + IL+K
Sbjct: 1 MKLIVGLGNPGSQYDHTRHNIGFEVIDELAKRFDSPLNQSKFKGVYASVHHKGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++ +M+++ + + E+ +VI+DDLDL G +RL+ G GHNG+KSI
Sbjct: 61 PLTYMNLSGESIVPLMDYFDI-DEEDLVVIYDDLDLPVGKIRLRQKGSPGGHNGMKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GI RPP + +VLG F+ ER + +I A + ++ +
Sbjct: 120 HLGTQQFNRIRVGIDRPPSGMKVPDYVLGRFTPEERETMQDVIKASADACEAWLEKPFLE 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 VMNSFN 185
>gi|260431161|ref|ZP_05785132.1| peptidyl-tRNA hydrolase [Silicibacter lacuscaerulensis ITI-1157]
gi|260414989|gb|EEX08248.1| peptidyl-tRNA hydrolase [Silicibacter lacuscaerulensis ITI-1157]
Length = 226
Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F W+ KF E+SEG+L + +L+K
Sbjct: 1 MKLFVGLGNPGAKYARNRHNIGFMAVDAIADAHGFGPWRSKFQGEVSEGRLGREKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQS+ E M FYKL + + V HD+LDL G +R K+GGG AGHNGL+SI +
Sbjct: 61 PMTYMNRSGQSVGEAMRFYKL-DSTDVTVFHDELDLAPGKVRAKSGGGHAGHNGLRSIHD 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y R+R+GIG P + +VLG+F+ + +L ++ ++ LA+ + F
Sbjct: 120 HIGAAYDRVRLGIGHPGRKELVSAYVLGDFAKADSQWLEDVLRGVSDGAVHLAEGDTGKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|319898491|ref|YP_004158584.1| Peptidyl-tRNA hydrolase [Bartonella clarridgeiae 73]
gi|319402455|emb|CBI75996.1| Peptidyl-tRNA hydrolase [Bartonella clarridgeiae 73]
Length = 192
Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats.
Identities = 97/185 (52%), Positives = 129/185 (69%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM ++ IH F W KKF AEIS G ++ + ILIK
Sbjct: 1 MLLIAGLGNPGSQYQNNRHNIGFMAVNTIHQILSFSPWSKKFQAEISNGLINSEKIILIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E + FYKL +L N +VI+D+LDL G +R+K GGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEALRFYKL-DLNNLIVIYDELDLPPGKIRIKIGGGSNGHNGIKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG NY R+R+GIG P + ++VLGNF+ ++ +L P++D IA ++ LL KR + F
Sbjct: 120 HCGTNYHRIRLGIGHPGAKELVNQYVLGNFTKSDQEWLSPLLDAIAHNIALLIKRNNNCF 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIT 184
>gi|219849378|ref|YP_002463811.1| peptidyl-tRNA hydrolase [Chloroflexus aggregans DSM 9485]
gi|254783860|sp|B8G3X3|PTH_CHLAD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219543637|gb|ACL25375.1| Aminoacyl-tRNA hydrolase [Chloroflexus aggregans DSM 9485]
Length = 188
Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 105/186 (56%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG Y RHNIGF ++ + H ++ +EI+EG + G R L+K
Sbjct: 1 MWLIVGLGNPGERYARTRHNIGFRSVETLAERHGLTFRNQRAKSEIAEGIIRGQRVALVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQ++ + +YK+ LVI+DDLDL F LRL+ G HNG++SI
Sbjct: 61 PQTYMNLSGQAVAALRQWYKIDPARELLVIYDDLDLPFAKLRLRERGSAGTHNGMRSIVG 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + RLRIGIG+PP +VL F+ E L ++ +A ++ ++ +
Sbjct: 121 QLGTTEFPRLRIGIGQPPGQMDAADYVLSRFTPEEEAVLPEVLARVADAVEVVVSEGLTA 180
Query: 180 FLNHIV 185
+N
Sbjct: 181 AMNRYN 186
>gi|65317511|ref|ZP_00390470.1| COG0193: Peptidyl-tRNA hydrolase [Bacillus anthracis str. A2012]
gi|165872550|ref|ZP_02217182.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0488]
gi|167635053|ref|ZP_02393370.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0442]
gi|167641506|ref|ZP_02399754.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0193]
gi|170688886|ref|ZP_02880088.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0465]
gi|170707529|ref|ZP_02897982.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0389]
gi|177655322|ref|ZP_02936851.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0174]
gi|190568956|ref|ZP_03021857.1| peptidyl-tRNA hydrolase [Bacillus anthracis Tsiankovskii-I]
gi|196036361|ref|ZP_03103758.1| peptidyl-tRNA hydrolase [Bacillus cereus W]
gi|196041774|ref|ZP_03109064.1| aminoacyl-tRNA hydrolase [Bacillus cereus NVH0597-99]
gi|196047390|ref|ZP_03114603.1| peptidyl-tRNA hydrolase [Bacillus cereus 03BB108]
gi|225862104|ref|YP_002747482.1| peptidyl-tRNA hydrolase [Bacillus cereus 03BB102]
gi|227812725|ref|YP_002812734.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. CDC 684]
gi|228943858|ref|ZP_04106244.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229089183|ref|ZP_04220465.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-42]
gi|229182446|ref|ZP_04309698.1| Peptidyl-tRNA hydrolase [Bacillus cereus BGSC 6E1]
gi|229602955|ref|YP_002864703.1| aminoacyl-tRNA hydrolase [Bacillus anthracis str. A0248]
gi|254724192|ref|ZP_05185977.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A1055]
gi|300119146|ref|ZP_07056847.1| peptidyl-tRNA hydrolase [Bacillus cereus SJ1]
gi|164711678|gb|EDR17223.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0488]
gi|167510491|gb|EDR85889.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0193]
gi|167529527|gb|EDR92277.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0442]
gi|170127525|gb|EDS96399.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0389]
gi|170667110|gb|EDT17871.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0465]
gi|172080163|gb|EDT65256.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. A0174]
gi|190559880|gb|EDV13864.1| peptidyl-tRNA hydrolase [Bacillus anthracis Tsiankovskii-I]
gi|195990991|gb|EDX54962.1| peptidyl-tRNA hydrolase [Bacillus cereus W]
gi|196021792|gb|EDX60486.1| peptidyl-tRNA hydrolase [Bacillus cereus 03BB108]
gi|196027394|gb|EDX66011.1| aminoacyl-tRNA hydrolase [Bacillus cereus NVH0597-99]
gi|225790416|gb|ACO30633.1| aminoacyl-tRNA hydrolase [Bacillus cereus 03BB102]
gi|227002837|gb|ACP12580.1| aminoacyl-tRNA hydrolase [Bacillus anthracis str. CDC 684]
gi|228601026|gb|EEK58594.1| Peptidyl-tRNA hydrolase [Bacillus cereus BGSC 6E1]
gi|228694146|gb|EEL47827.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-42]
gi|228815815|gb|EEM62050.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229267363|gb|ACQ49000.1| aminoacyl-tRNA hydrolase [Bacillus anthracis str. A0248]
gi|298723468|gb|EFI64209.1| peptidyl-tRNA hydrolase [Bacillus cereus SJ1]
Length = 207
Score = 263 bits (674), Expect = 7e-69, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQ 200
Query: 180 FLNHIVS 186
+N S
Sbjct: 201 IMNTFNS 207
>gi|148655155|ref|YP_001275360.1| peptidyl-tRNA hydrolase [Roseiflexus sp. RS-1]
gi|166229447|sp|A5US07|PTH_ROSS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148567265|gb|ABQ89410.1| peptidyl-tRNA hydrolase [Roseiflexus sp. RS-1]
Length = 217
Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats.
Identities = 72/187 (38%), Positives = 104/187 (55%), Gaps = 1/187 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG Y RHNIGF + + H K+ HA I+EG + G R L
Sbjct: 1 MWLIVGLGNPGDTYARTRHNIGFRVVSELAQRHRLEFTHKRAHARIAEGIIAGQRVALAL 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQ+++ + +YK+ LV++DD+DL FG LRL+ G HNG++SI
Sbjct: 61 PQTYMNLSGQAVVGLRQWYKIDPATELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSIIT 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLRIGI RPP + +VLG F+ + L I+ A +L + +
Sbjct: 121 LLGSQVFPRLRIGIDRPPPAWDLADYVLGRFTPEQEAQLPDIMQKAADALETVVREGMAV 180
Query: 180 FLNHIVS 186
+N I +
Sbjct: 181 AMNRINA 187
>gi|309789598|ref|ZP_07684179.1| aminoacyl-tRNA hydrolase [Oscillochloris trichoides DG6]
gi|308228334|gb|EFO81981.1| aminoacyl-tRNA hydrolase [Oscillochloris trichoides DG6]
Length = 189
Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 110/187 (58%), Gaps = 1/187 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG +Y RHNIGF C+D + H K+ ++ ++EG + G R L K
Sbjct: 1 MWLLIGLGNPGEKYDRTRHNIGFACLDALAKRHGLEFRTKRANSLVAEGSIAGQRVALAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ + ++YK+ ++ LVI+DDLDL F LRL+ G HNG++SI
Sbjct: 61 PQTYMNESGRAVSALRSWYKIEPAQDLLVIYDDLDLPFARLRLRERGSSGTHNGMRSIVA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G N + RLR+GI +PP +VL F+ E + + D +A + ++ + ++
Sbjct: 121 QLGSNAFPRLRVGIDQPPGKMDAAAYVLSRFNKEEEAQIPDLCDRVADAAEVVLRDGVIA 180
Query: 180 FLNHIVS 186
+N +
Sbjct: 181 AMNRYNA 187
>gi|27262436|gb|AAN87499.1| Peptidyl-tRNA hydrolase [Heliobacillus mobilis]
Length = 190
Score = 263 bits (673), Expect = 9e-69, Method: Composition-based stats.
Identities = 76/190 (40%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y + RHNIGFM +D++ +K KF SE +L G + L+K
Sbjct: 1 MKAIVGLGNPGRDYEKTRHNIGFMVVDQLAERWGHDGFKAKFQGSFSEVRLGGQKVFLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQ+ + FYKL E+ LV++DDLDL G LR +T G GHNG+KS+
Sbjct: 61 PQTYMNLSGQAASAMAAFYKLAP-EDILVVYDDLDLPPGKLRGRTKGSSGGHNGIKSLIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +N+ RL++GIGRP +VL +F + E + ID ++ L +R +
Sbjct: 120 CLGSENFPRLKLGIGRPASRQPSASYVLESFRAEELADIQKAIDLACDAVELWLERGMIE 179
Query: 180 FLNHIVSVRK 189
+N K
Sbjct: 180 VMNRFNGGEK 189
>gi|118475822|ref|YP_892973.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis str. Al Hakam]
gi|254682322|ref|ZP_05146183.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. CNEVA-9066]
gi|254735453|ref|ZP_05193161.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Western North
America USA6153]
gi|254744645|ref|ZP_05202324.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Kruger B]
gi|254756350|ref|ZP_05208379.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Vollum]
gi|254762406|ref|ZP_05214248.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Australia 94]
gi|118415047|gb|ABK83466.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis str. Al Hakam]
Length = 210
Score = 263 bits (673), Expect = 9e-69, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 25 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLK 84
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 85 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 143
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 144 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQ 203
Query: 180 FLNHIVS 186
+N S
Sbjct: 204 IMNTFNS 210
>gi|84683371|ref|ZP_01011274.1| peptidyl-tRNA hydrolase [Maritimibacter alkaliphilus HTCC2654]
gi|84668114|gb|EAQ14581.1| peptidyl-tRNA hydrolase [Rhodobacterales bacterium HTCC2654]
Length = 227
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 83/185 (44%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +DRI H F W+ KF ++SEG L G + IL+K
Sbjct: 1 MKLFVGLGNPGSKYAGNRHNIGFMAVDRIREDHGFAPWRSKFQGQVSEGNLGGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M FYKL + + V HD+LDL ++LK GGG AGHNGL+SI +
Sbjct: 61 PETFMNLSGQSVGEAMRFYKL-DSTDVTVFHDELDLPPFKVKLKLGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+Y R+R+GIG P + +VL +F+ E +L ++ I+ L ++ F
Sbjct: 120 HISPHYGRVRLGIGHPGHKDRVSPYVLSDFAKQEEKWLDDMLRGISDGAEHLVTDDNAKF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 TNAVA 184
>gi|229015454|ref|ZP_04172455.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1273]
gi|229021659|ref|ZP_04178246.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1272]
gi|228739662|gb|EEL90071.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1272]
gi|228745838|gb|EEL95839.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1273]
Length = 190
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 5 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 65 PLTYMNLSGESIRPLMDYYKI-DVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 124 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEELPGVNQSIEKTADACEEWLNKPFLQ 183
Query: 180 FLNHIVS 186
+N S
Sbjct: 184 IMNTFNS 190
>gi|254462367|ref|ZP_05075783.1| peptidyl-tRNA hydrolase [Rhodobacterales bacterium HTCC2083]
gi|206678956|gb|EDZ43443.1| peptidyl-tRNA hydrolase [Rhodobacteraceae bacterium HTCC2083]
Length = 227
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 79/184 (42%), Positives = 112/184 (60%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +NRHNIGFM +D I H F WK +F ++S G L + +L+K
Sbjct: 1 MQLFVGLGNPGAKYAKNRHNIGFMVVDEIAGDHGFTPWKSQFQGQVSSGTLGSEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E M FYK+ E+ V HD+LDL +R+K GG AGHNGL+SI +
Sbjct: 61 PATFMNLSGQSVGEAMRFYKMTP-EDVTVFHDELDLAPSKVRVKKSGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G++Y+R+R+GIG P + +VL +F+ E +L + + LA + F
Sbjct: 120 HIGEHYQRVRLGIGHPGHKDRVAGYVLSDFAKAEAGWLDDVTRGCSDGAKELASGDTGRF 179
Query: 181 LNHI 184
+N +
Sbjct: 180 MNAV 183
>gi|226309688|ref|YP_002769582.1| peptidyl-tRNA hydrolase [Brevibacillus brevis NBRC 100599]
gi|254783855|sp|C0ZHD7|PTH_BREBN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226092636|dbj|BAH41078.1| peptidyl-tRNA hydrolase [Brevibacillus brevis NBRC 100599]
Length = 189
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 76/190 (40%), Positives = 117/190 (61%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHN GFM ID+I P + KF A + EG+++G + +L+K
Sbjct: 1 MKVIIGLGNPGKKYEDTRHNAGFMAIDKISDKWGIPVTQNKFRALVGEGRIEGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ EV+ FYKL ++ +VI+DDLDL G LRL+ G GHNG+KS+ +
Sbjct: 61 PQTYMNLSGESVAEVLKFYKLIP-DDLVVIYDDLDLPTGHLRLREKGSAGGHNGIKSMIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + +KR+++GI RP + +VL F ER + + A + + + +
Sbjct: 120 HLGTQEFKRIKVGISRPEPGRSVSDYVLNTFPVAERADIQEAVSLAADACAMWTRESFLK 179
Query: 180 FLNHIVSVRK 189
+NH S++K
Sbjct: 180 VMNHFNSLKK 189
>gi|30260242|ref|NP_842619.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Ames]
gi|47525304|ref|YP_016653.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183085|ref|YP_026337.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Sterne]
gi|49481760|ref|YP_034404.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|38372419|sp|Q81VY9|PTH_BACAN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052958|sp|Q6HPW6|PTH_BACHK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|30253563|gb|AAP24105.1| aminoacyl-tRNA hydrolase [Bacillus anthracis str. Ames]
gi|47500452|gb|AAT29128.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. 'Ames Ancestor']
gi|49177012|gb|AAT52388.1| peptidyl-tRNA hydrolase [Bacillus anthracis str. Sterne]
gi|49333316|gb|AAT63962.1| aminoacyl-tRNA hydrolase (peptidyl-tRNA hydrolase);stage V
sporulation protein C [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 186
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 120 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQ 179
Query: 180 FLNHIVS 186
+N S
Sbjct: 180 IMNTFNS 186
>gi|83951129|ref|ZP_00959862.1| peptidyl-tRNA hydrolase [Roseovarius nubinhibens ISM]
gi|83839028|gb|EAP78324.1| peptidyl-tRNA hydrolase [Roseovarius nubinhibens ISM]
Length = 231
Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats.
Identities = 86/185 (46%), Positives = 120/185 (64%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I AGLGNPG +Y NRHNIGFM +DRI H F WK +F + SEG+L + +L+K
Sbjct: 4 MLIFAGLGNPGAKYAGNRHNIGFMALDRIAEDHGFGPWKSRFQGQASEGRLGSEKLLLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M FYKL + +V HD+LDL G +R+K GGG AGHNGL+SI +
Sbjct: 64 PETFMNLSGQSVGEAMRFYKLTPA-DVIVFHDELDLAPGKIRVKQGGGHAGHNGLRSIHQ 122
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+GIG P + ++VL +F+ ++ +L ++ I+ LA ++ F
Sbjct: 123 HIGPDYARVRLGIGHPGRKELVAQYVLHDFARADQDWLDDLMRGISDGAKSLAAGDNSKF 182
Query: 181 LNHIV 185
LN +
Sbjct: 183 LNAVA 187
>gi|228989259|ref|ZP_04149252.1| Peptidyl-tRNA hydrolase [Bacillus pseudomycoides DSM 12442]
gi|229003057|ref|ZP_04160914.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock1-4]
gi|228758215|gb|EEM07403.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock1-4]
gi|228770469|gb|EEM19040.1| Peptidyl-tRNA hydrolase [Bacillus pseudomycoides DSM 12442]
Length = 186
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMGIDELAKRWGISLSEQKFKGMYGSGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F++ E + I+ A + K+ +
Sbjct: 120 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTAEELPEVNQSIEKAADACEEWLKKPFLQ 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 IMNTFN 185
>gi|89100523|ref|ZP_01173384.1| peptidyl-tRNA hydrolase [Bacillus sp. NRRL B-14911]
gi|89084789|gb|EAR63929.1| peptidyl-tRNA hydrolase [Bacillus sp. NRRL B-14911]
Length = 187
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 106/187 (56%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG EY + RHNIGF IDR+ P + KF G++DG + L+K
Sbjct: 1 MKLFVGLGNPGKEYEKTRHNIGFDVIDRLSGKLNIPLDQAKFKGVFGMGRVDGEKVFLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++Y + + E+ VI+DDLDL G +RL+ G GHNG+KS
Sbjct: 61 PLTYMNLSGESIRPLMDYYDI-DTEDLAVIYDDLDLPPGKIRLRQKGSAGGHNGIKSTIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GIGRP + +VLG F++ E+ + D A + ++ +
Sbjct: 120 HTGTQEFSRIRVGIGRPEGGMKVTDYVLGRFTAEEQKVMDEAADRSADACIDWIRKPFLE 179
Query: 180 FLNHIVS 186
+N
Sbjct: 180 VMNQYNQ 186
>gi|229170902|ref|ZP_04298505.1| Peptidyl-tRNA hydrolase [Bacillus cereus MM3]
gi|228612568|gb|EEK69787.1| Peptidyl-tRNA hydrolase [Bacillus cereus MM3]
Length = 207
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGIFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVSHSIEKAADACEEWLNKPFLQ 200
Query: 180 FLNHIVS 186
+N S
Sbjct: 201 IMNTFNS 207
>gi|206977947|ref|ZP_03238834.1| peptidyl-tRNA hydrolase [Bacillus cereus H3081.97]
gi|217957627|ref|YP_002336169.1| peptidyl-tRNA hydrolase [Bacillus cereus AH187]
gi|218901253|ref|YP_002449087.1| peptidyl-tRNA hydrolase [Bacillus cereus AH820]
gi|228912791|ref|ZP_04076439.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228925305|ref|ZP_04088402.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931554|ref|ZP_04094461.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228983307|ref|ZP_04143521.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229119714|ref|ZP_04248976.1| Peptidyl-tRNA hydrolase [Bacillus cereus 95/8201]
gi|229153830|ref|ZP_04281961.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 4342]
gi|229194442|ref|ZP_04321246.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1293]
gi|206743853|gb|EDZ55273.1| peptidyl-tRNA hydrolase [Bacillus cereus H3081.97]
gi|217064082|gb|ACJ78332.1| peptidyl-tRNA hydrolase [Bacillus cereus AH187]
gi|218535325|gb|ACK87723.1| peptidyl-tRNA hydrolase [Bacillus cereus AH820]
gi|228589032|gb|EEK47046.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1293]
gi|228629634|gb|EEK86330.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 4342]
gi|228663739|gb|EEL19317.1| Peptidyl-tRNA hydrolase [Bacillus cereus 95/8201]
gi|228776421|gb|EEM24773.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228828106|gb|EEM73833.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834352|gb|EEM79892.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228846851|gb|EEM91855.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|324324041|gb|ADY19301.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 207
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQ 200
Query: 180 FLNHIVS 186
+N S
Sbjct: 201 IMNTFNS 207
>gi|229159225|ref|ZP_04287250.1| Peptidyl-tRNA hydrolase [Bacillus cereus R309803]
gi|228624240|gb|EEK81041.1| Peptidyl-tRNA hydrolase [Bacillus cereus R309803]
Length = 186
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VL F+S E + I+ A + K+ +
Sbjct: 120 HLGTQEFQRIRMGIDRPKNGMKVVDYVLARFTSEEIPDVNHSIEKAADACEEWLKKPFLQ 179
Query: 180 FLNHIVS 186
+N S
Sbjct: 180 IMNTFNS 186
>gi|56418581|ref|YP_145899.1| peptidyl-tRNA hydrolase [Geobacillus kaustophilus HTA426]
gi|68052880|sp|Q5L3U7|PTH_GEOKA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56378423|dbj|BAD74331.1| stage V sporulation protein C (peptidyl-tRNA hydrolase)
[Geobacillus kaustophilus HTA426]
Length = 186
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG EY + RHN+GF ID + KF + G + L K
Sbjct: 1 MKLFVGLGNPGKEYEQTRHNVGFFVIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M++Y + +++ +VI+DDLDL G +RL+ G GHNG+KS+
Sbjct: 61 PLTYMNLSGECVRPLMDYYDIA-IDDVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIH 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +KR+RIGIGRP + +VLG F+ E+ + + A + K +
Sbjct: 120 HLGTEQFKRIRIGIGRPAGGQPVTDYVLGRFTEEEKPAVDKAVLRAADACEQAVKAPFIQ 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 VMNDFN 185
>gi|319403818|emb|CBI77402.1| Peptidyl-tRNA hydrolase [Bartonella rochalimae ATCC BAA-1498]
Length = 197
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 99/185 (53%), Positives = 128/185 (69%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y NRHNIGFM I+ IH F W KKF AEIS G ++ + ILIK
Sbjct: 1 MLLIAGLGNPGSHYNNNRHNIGFMAINVIHQIFSFSPWSKKFQAEISNGFINDEKIILIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E + FYKL +L N +VI+D+LDL G +R+K GGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEALRFYKL-DLNNLIVIYDELDLPPGKIRIKIGGGSNGHNGIKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG NY RLR+GIG P + ++VLGNF+ ++ +L P++D IA ++ LL KR + F
Sbjct: 120 HCGTNYCRLRLGIGHPGPKELVNQYVLGNFTKSDQEWLTPLLDAIANNMELLIKRNNNCF 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIT 184
>gi|163938059|ref|YP_001642943.1| peptidyl-tRNA hydrolase [Bacillus weihenstephanensis KBAB4]
gi|229131059|ref|ZP_04259972.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST196]
gi|163860256|gb|ABY41315.1| Aminoacyl-tRNA hydrolase [Bacillus weihenstephanensis KBAB4]
gi|228652396|gb|EEL08320.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST196]
Length = 207
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 113/187 (60%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+N A + + +
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEISGVNQSIENAADACEEWLNKPFLQ 200
Query: 180 FLNHIVS 186
+N S
Sbjct: 201 IMNTFNS 207
>gi|228937354|ref|ZP_04100001.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228970240|ref|ZP_04130900.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976810|ref|ZP_04137223.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis Bt407]
gi|228782906|gb|EEM31071.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis Bt407]
gi|228789475|gb|EEM37394.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228822312|gb|EEM68293.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326937843|gb|AEA13739.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 207
Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQ 200
Query: 180 FLNHIVS 186
+N S
Sbjct: 201 IMNTFNS 207
>gi|315122335|ref|YP_004062824.1| peptidyl-tRNA hydrolase [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495737|gb|ADR52336.1| peptidyl-tRNA hydrolase [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 196
Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats.
Identities = 136/186 (73%), Positives = 159/186 (85%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFIVAGLGNPG+EY ENRHNIGFMC+DRIHSFH FP+WKKKF AEISE LD +R IL+K
Sbjct: 1 MFIVAGLGNPGNEYSENRHNIGFMCVDRIHSFHSFPSWKKKFSAEISEKHLDDIRIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+SL+EV+NFYKL +L+N L+IHD+LDL G LRLKTGGGDAGHNGLKSISE
Sbjct: 61 PQTFMNLSGKSLIEVINFYKL-SLQNCLIIHDELDLSLGILRLKTGGGDAGHNGLKSISE 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
KCGKNYKRLRIGIGRP + ++I+HVL +F E+ L PI+DNIAR +PLL K+ED F
Sbjct: 120 KCGKNYKRLRIGIGRPQNKEYVIKHVLSDFYPSEQSVLFPILDNIARHIPLLVKKEDDLF 179
Query: 181 LNHIVS 186
LN++V
Sbjct: 180 LNYVVQ 185
>gi|261417546|ref|YP_003251228.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC61]
gi|319765203|ref|YP_004130704.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC52]
gi|261374003|gb|ACX76746.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC61]
gi|317110069|gb|ADU92561.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y412MC52]
Length = 186
Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG EY + RHN+GF ID + KF + G + L K
Sbjct: 1 MKLFVGLGNPGEEYEQTRHNVGFFVIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M++Y + +++ +VI+DDLDL G +RL+ G GHNG+KS+
Sbjct: 61 PLTYMNLSGECVRPLMDYYDIA-IDDVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIH 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +KR+RIGIGRP + +VLG F+ E+ + + A + K +
Sbjct: 120 HLGTEQFKRIRIGIGRPTGGQPVTDYVLGRFTEEEKPAVDKAVLRAADACEQAVKAPFIQ 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 VMNDFN 185
>gi|121534877|ref|ZP_01666696.1| Aminoacyl-tRNA hydrolase [Thermosinus carboxydivorans Nor1]
gi|121306476|gb|EAX47399.1| Aminoacyl-tRNA hydrolase [Thermosinus carboxydivorans Nor1]
Length = 185
Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 105/186 (56%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN+GFM +D + W+++ AE++E + +L+K
Sbjct: 1 MKVIVGLGNPGREYSATRHNVGFMVVDELARRWGVSDWRRRHEAEVAEYR-GAEAVLLVK 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E+ +YKL E+ +V+ DDLDL G LRL+ G GH G++SI
Sbjct: 60 PQTYMNLSGRAVGEIARWYKLA-AEDIIVVFDDLDLPVGRLRLRMKGSSGGHRGIESILA 118
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + + R+R+GIGRPP +VL F+ E + I A ++ + K
Sbjct: 119 QLGADTFARVRVGIGRPPQGWATADYVLSKFTPDEAPLIEQAIVRAADAVETILKDGLNK 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 AMNAFN 184
>gi|158425772|ref|YP_001527064.1| peptidyl-tRNA hydrolase [Azorhizobium caulinodans ORS 571]
gi|172047830|sp|A8HS70|PTH_AZOC5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|158332661|dbj|BAF90146.1| peptidyl-tRNA hydrolase [Azorhizobium caulinodans ORS 571]
Length = 204
Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats.
Identities = 81/187 (43%), Positives = 116/187 (62%), Gaps = 1/187 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF+ AGLGNPG +Y NRHNIGFM +D I H W+++F +SEG++ G + + +
Sbjct: 1 MFLFAGLGNPGPKYAGNRHNIGFMAVDAIVRRHRLSPWRRRFQGAVSEGEIAGEKVLALL 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN SG+++ E FYK+P LEN V HD+LDL +R+K GGG+AGHNGL+SI+
Sbjct: 61 PETFMNESGRAVAEAAKFYKIP-LENIFVFHDELDLPPAKIRVKKGGGNAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+CG +Y R+R+GIG P D + + +VL +F ER ++ + A P L + F
Sbjct: 120 QCGNDYWRVRLGIGHPGDKSLVHSYVLNDFGKAEREWVEAVNTACADFAPALIGGKAEDF 179
Query: 181 LNHIVSV 187
N
Sbjct: 180 QNRAHLF 186
>gi|239825632|ref|YP_002948256.1| peptidyl-tRNA hydrolase [Geobacillus sp. WCH70]
gi|259535195|sp|C5D374|PTH_GEOSW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|239805925|gb|ACS22990.1| peptidyl-tRNA hydrolase [Geobacillus sp. WCH70]
Length = 186
Score = 261 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG EY + RHN GFM ID + KFH ++ + G + L K
Sbjct: 1 MKLFVGLGNPGKEYEQTRHNAGFMVIDELAKRWNISFQTTKFHGMMASTVIFGEKVALCK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M++Y + ++++ +VI+DDLDL G +RL+ G GHNG+KS+
Sbjct: 61 PLTYMNLSGECVRPLMDYYHI-DVDDVIVIYDDLDLPPGKIRLRMKGSSGGHNGIKSLIH 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + +KR+RIGIGRP + I +VLG F+ E ++ I A + +
Sbjct: 120 HLGTQEFKRVRIGIGRPANGQKITDYVLGRFTKEESDAVMEAILRAADACEKAVVTPFLQ 179
Query: 180 FLNHIVS 186
+N +
Sbjct: 180 VMNEFNA 186
>gi|218232965|ref|YP_002364901.1| peptidyl-tRNA hydrolase [Bacillus cereus B4264]
gi|228898805|ref|ZP_04063088.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 4222]
gi|228905848|ref|ZP_04069746.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 200]
gi|228919002|ref|ZP_04082382.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228950600|ref|ZP_04112735.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229039957|ref|ZP_04189721.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH676]
gi|229067816|ref|ZP_04201134.1| Peptidyl-tRNA hydrolase [Bacillus cereus F65185]
gi|229077330|ref|ZP_04210007.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-2]
gi|229107738|ref|ZP_04237375.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-15]
gi|229125569|ref|ZP_04254602.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-Cer4]
gi|229142857|ref|ZP_04271300.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST24]
gi|229148461|ref|ZP_04276718.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1550]
gi|229176652|ref|ZP_04304057.1| Peptidyl-tRNA hydrolase [Bacillus cereus 172560W]
gi|229188337|ref|ZP_04315386.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10876]
gi|296500884|ref|YP_003662584.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis BMB171]
gi|218160922|gb|ACK60914.1| aminoacyl-tRNA hydrolase [Bacillus cereus B4264]
gi|228595136|gb|EEK52906.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10876]
gi|228606819|gb|EEK64235.1| Peptidyl-tRNA hydrolase [Bacillus cereus 172560W]
gi|228635003|gb|EEK91575.1| Peptidyl-tRNA hydrolase [Bacillus cereus m1550]
gi|228640620|gb|EEK97007.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST24]
gi|228657886|gb|EEL13691.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-Cer4]
gi|228675711|gb|EEL30918.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-15]
gi|228705986|gb|EEL58297.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-2]
gi|228715300|gb|EEL67158.1| Peptidyl-tRNA hydrolase [Bacillus cereus F65185]
gi|228727365|gb|EEL78558.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH676]
gi|228809075|gb|EEM55559.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228840651|gb|EEM85912.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228853788|gb|EEM98547.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 200]
gi|228860830|gb|EEN05207.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis IBL 4222]
gi|296321936|gb|ADH04864.1| peptidyl-tRNA hydrolase [Bacillus thuringiensis BMB171]
Length = 207
Score = 261 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQ 200
Query: 180 FLNHIVS 186
+N S
Sbjct: 201 IMNTFNS 207
>gi|229074113|ref|ZP_04207160.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-18]
gi|229094773|ref|ZP_04225779.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-29]
gi|229100842|ref|ZP_04231654.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-28]
gi|229113726|ref|ZP_04243162.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-3]
gi|228669723|gb|EEL25129.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock1-3]
gi|228682576|gb|EEL36641.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-28]
gi|228688641|gb|EEL42513.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-29]
gi|228709007|gb|EEL61133.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock4-18]
Length = 207
Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++++++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVDDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQ 200
Query: 180 FLNHIVS 186
+N S
Sbjct: 201 IMNTFNS 207
>gi|47569900|ref|ZP_00240567.1| peptidyl-tRNA hydrolase [Bacillus cereus G9241]
gi|52145164|ref|YP_081663.1| peptidyl-tRNA hydrolase [Bacillus cereus E33L]
gi|222093821|ref|YP_002527870.1| peptidyl-tRNA hydrolase [Bacillus cereus Q1]
gi|68052912|sp|Q63HI2|PTH_BACCZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783851|sp|B9IZD4|PTH_BACCQ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|47553434|gb|EAL11818.1| peptidyl-tRNA hydrolase [Bacillus cereus G9241]
gi|51978633|gb|AAU20183.1| aminoacyl-tRNA hydrolase (peptidyl-tRNA hydrolase);stage V
sporulation protein C [Bacillus cereus E33L]
gi|221237868|gb|ACM10578.1| aminoacyl-tRNA hydrolase (peptidyl-tRNA hydrolase);stage V
sporulation protein C [Bacillus cereus Q1]
Length = 186
Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 120 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQ 179
Query: 180 FLNHIVS 186
+N S
Sbjct: 180 IMNTFNS 186
>gi|218895187|ref|YP_002443598.1| peptidyl-tRNA hydrolase [Bacillus cereus G9842]
gi|228963151|ref|ZP_04124321.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|218543107|gb|ACK95501.1| peptidyl-tRNA hydrolase [Bacillus cereus G9842]
gi|228796536|gb|EEM43974.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 207
Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 113/187 (60%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS+
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSMIS 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQ 200
Query: 180 FLNHIVS 186
+N S
Sbjct: 201 IMNTFNS 207
>gi|311028984|ref|ZP_07707074.1| peptidyl-tRNA hydrolase [Bacillus sp. m3-13]
gi|311032272|ref|ZP_07710362.1| peptidyl-tRNA hydrolase [Bacillus sp. m3-13]
Length = 186
Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 110/187 (58%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y E RHNIGFM ID + P + KF +G ++G + +L+K
Sbjct: 1 MKVFVGLGNPGRQYEETRHNIGFMVIDELADKWNIPLTQSKFKGIFGQGTINGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +++FYKL ++E+ +VI+DDLDL G LRL+ G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECVRPLLDFYKL-DVEDLVVIYDDLDLPAGKLRLRQKGSAGGHNGIKSLIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+N+ R+R+GI RP + I +VLG F + ER + I A + +E +
Sbjct: 120 HLQTQNFNRIRMGIDRPKNGPSISDYVLGKFQTEERPAIDDSIKKAAEACEENLSKEFLQ 179
Query: 180 FLNHIVS 186
+N
Sbjct: 180 VMNTFNQ 186
>gi|228956493|ref|ZP_04118290.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228803183|gb|EEM50004.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 207
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEITDVNHSIEKAADACEEWLNKPFLQ 200
Query: 180 FLNHIVS 186
+N S
Sbjct: 201 IMNTFNS 207
>gi|30018322|ref|NP_829953.1| peptidyl-tRNA hydrolase [Bacillus cereus ATCC 14579]
gi|75759613|ref|ZP_00739699.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|29893862|gb|AAP07154.1| Peptidyl-tRNA hydrolase [Bacillus cereus ATCC 14579]
gi|74492904|gb|EAO56034.1| Peptidyl-tRNA hydrolase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 210
Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 25 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 84
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 85 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 143
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 144 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQ 203
Query: 180 FLNHIVS 186
+N S
Sbjct: 204 IMNTFNS 210
>gi|228995442|ref|ZP_04155112.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock3-17]
gi|228764303|gb|EEM13180.1| Peptidyl-tRNA hydrolase [Bacillus mycoides Rock3-17]
Length = 186
Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMGIDELAKRWGISLSEQKFKGMYGSGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ +E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-GVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F++ E + I+ A + K+ +
Sbjct: 120 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTAEELPEVNQSIEKAADACEEWLKKPFLQ 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 IMNTFN 185
>gi|229027898|ref|ZP_04184053.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1271]
gi|228733412|gb|EEL84239.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH1271]
Length = 207
Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVGHSIEKAADACEEWLNKPFLQ 200
Query: 180 FLNHIVS 186
+N S
Sbjct: 201 IMNTFNS 207
>gi|38372414|sp|Q81J96|PTH_BACCR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 186
Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 120 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQ 179
Query: 180 FLNHIVS 186
+N S
Sbjct: 180 IMNTFNS 186
>gi|229083370|ref|ZP_04215721.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-44]
gi|228699935|gb|EEL52569.1| Peptidyl-tRNA hydrolase [Bacillus cereus Rock3-44]
Length = 186
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMGIDELAKRWGISLNEQKFKGMYGSGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+G+ RP + ++ +VLG F++ E + I+ A + K+ +
Sbjct: 120 HLGTQEFQRIRMGVDRPKNGMKVVDYVLGRFTAEELPEVNASIEKAADACEEWLKKPFLQ 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 IMNTFN 185
>gi|154252703|ref|YP_001413527.1| aminoacyl-tRNA hydrolase [Parvibaculum lavamentivorans DS-1]
gi|171769610|sp|A7HVD7|PTH_PARL1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|154156653|gb|ABS63870.1| Aminoacyl-tRNA hydrolase [Parvibaculum lavamentivorans DS-1]
Length = 205
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 84/186 (45%), Positives = 122/186 (65%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM D I H F + +F +SEG LDG + I++K
Sbjct: 1 MILLVGLGNPGEKYARNRHNIGFMAADGIVRRHSFSPPRARFQGIVSEGTLDGEKVIVLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E M FYKL + +V +D+LDL+ G +R+KTGGG AGHNG++SI+
Sbjct: 61 PTTYMNESGRAVGEAMRFYKLTPA-DVVVFYDELDLEPGKVRMKTGGGAAGHNGIRSIAA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE-RYFLLPIIDNIARSLPLLAKREDVS 179
G ++R+RIGIG P ++ +VLG+FS E ++ +I+ IA + PLLA +D +
Sbjct: 120 HIGPEFRRVRIGIGHPGAKDRVLGYVLGDFSKAETADWVETLIEAIADAAPLLATGKDAT 179
Query: 180 FLNHIV 185
F N +
Sbjct: 180 FANKVH 185
>gi|295694756|ref|YP_003587994.1| peptidyl-tRNA hydrolase [Bacillus tusciae DSM 2912]
gi|295410358|gb|ADG04850.1| peptidyl-tRNA hydrolase [Bacillus tusciae DSM 2912]
Length = 184
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 107/185 (57%), Gaps = 2/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y + RHN GFM IDR+ + + FH+ + ++ + +L+K
Sbjct: 1 MWLIAGLGNPGPQYAQTRHNAGFMVIDRLAARWSVSVTSRGFHSLTASTRVGEEQVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG ++ E + +Y+L E +V++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PQTFMNESGLAVGEAVRWYRLGP-ERLIVVYDDLDLPLGKIRLRYKGSSGGHNGMKSILQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+RIGIGRP +I HVL FS E + P ++ + + +
Sbjct: 120 HLGTETFGRVRIGIGRPLKGRSVIDHVLSPFSPDELSTVRPALNRAVELIEIAVQEGFEK 179
Query: 180 FLNHI 184
++ +
Sbjct: 180 AMSKV 184
>gi|154503861|ref|ZP_02040921.1| hypothetical protein RUMGNA_01687 [Ruminococcus gnavus ATCC 29149]
gi|153795460|gb|EDN77880.1| hypothetical protein RUMGNA_01687 [Ruminococcus gnavus ATCC 29149]
Length = 192
Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 108/190 (56%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+ GLGNP EY RHN+GF ID + + KK A I +G ++G + IL K
Sbjct: 1 MFIIVGLGNPTPEYEGTRHNVGFEVIDALARKYNIDVDTKKHRAYIGKGMIEGQKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ ++++YK+ + LVI+DD+ L G +R++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESVRSLLDYYKVDEEQELLVIYDDISLGVGQIRIRAKGSAGGHNGIKNIIA 120
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+ + R+++G+G P + +VLG+FS E+ + ++ ++ + +
Sbjct: 121 HLGGQVFPRIKVGVGEKPPKWDLADYVLGHFSKEEQEQMEEGYEHAVCAVKEIVTGNIEA 180
Query: 180 FLNHIVSVRK 189
+N +K
Sbjct: 181 AMNEYNRKKK 190
>gi|42779130|ref|NP_976377.1| peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10987]
gi|42735045|gb|AAS38985.1| peptidyl-tRNA hydrolase [Bacillus cereus ATCC 10987]
Length = 210
Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 25 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 84
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 85 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 143
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 144 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPGVNHSIEKAADACEEWLNKPFLQ 203
Query: 180 FLNHIVS 186
+N S
Sbjct: 204 IMNTFNS 210
>gi|310815222|ref|YP_003963186.1| peptidyl-tRNA hydrolase [Ketogulonicigenium vulgare Y25]
gi|308753957|gb|ADO41886.1| peptidyl-tRNA hydrolase [Ketogulonicigenium vulgare Y25]
Length = 241
Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats.
Identities = 80/185 (43%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F ++ +F I+EG+L + +L+K
Sbjct: 1 MKLFVGLGNPGAKYAGNRHNIGFMAMDYIAGDHGFTPFRARFQGLIAEGRLGDEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M F+KL ++ +V HD+LDL G ++ KTGGG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVGEAMRFHKLTP-DDVVVFHDELDLAPGRIKAKTGGGHAGHNGLRSIHG 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+G+G P + +VL +F+ ++ +L ++ I+ LLA + F
Sbjct: 120 HIGEAYHRVRMGVGHPGHKDAVASYVLHDFAKADQQWLDDMLRGISDGAALLAAGDQARF 179
Query: 181 LNHIV 185
LN +
Sbjct: 180 LNAVN 184
>gi|126463243|ref|YP_001044357.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides ATCC 17029]
gi|166229441|sp|A3PML9|PTH_RHOS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|126104907|gb|ABN77585.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides ATCC 17029]
Length = 225
Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats.
Identities = 82/185 (44%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIG+M ++ I + H F W+ +F SEG+L + +L+K
Sbjct: 1 MKLFVGLGNPGARYAGNRHNIGYMAVEAIAADHGFGPWRARFQGLTSEGRLGSEQVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M FYKL + +V HD+LDL G LRLK GGG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVGEAMRFYKLTPA-DVIVFHDELDLAPGKLRLKQGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+GIG P + +VL +F+ ++ +L ++ IA LA+ + F
Sbjct: 120 HVGEAYGRVRLGIGHPGHKDAVAPYVLSDFAKADQDWLADLLRGIADGAEALARGDGAKF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNAVA 184
>gi|301051787|ref|YP_003789998.1| peptidyl-tRNA hydrolase [Bacillus anthracis CI]
gi|300373956|gb|ADK02860.1| peptidyl-tRNA hydrolase [Bacillus cereus biovar anthracis str. CI]
Length = 207
Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSKEIPDVNHSIEKAADACEEWLNKPFLQ 200
Query: 180 FLNHIVS 186
+N S
Sbjct: 201 IMNTFNS 207
>gi|297528421|ref|YP_003669696.1| peptidyl-tRNA hydrolase [Geobacillus sp. C56-T3]
gi|297251673|gb|ADI25119.1| peptidyl-tRNA hydrolase [Geobacillus sp. C56-T3]
Length = 186
Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG EY + RHN+GF ID + KF + G + L K
Sbjct: 1 MKLFVGLGNPGEEYEQTRHNVGFFVIDELAKRWNVSLKTAKFRGLFGTASVSGEKVALCK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M++Y + +++ +VI+DDLDL G +RL+ G GHNG+KS+
Sbjct: 61 PLTYMNLSGECVRPLMDYYDIA-IDDVIVIYDDLDLPPGKIRLRLKGSSGGHNGVKSLIH 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +KR+RIGIGRP + +VLG F+ E+ + + A + K +
Sbjct: 120 HLGTEQFKRIRIGIGRPTGGQPVTDYVLGRFTEEEKPAVDKAVLRAANACEQAVKAPFIQ 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 VMNDFN 185
>gi|68052974|sp|Q73FF7|PTH_BACC1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 186
Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 120 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPGVNHSIEKAADACEEWLNKPFLQ 179
Query: 180 FLNHIVS 186
+N S
Sbjct: 180 IMNTFNS 186
>gi|16077121|ref|NP_387934.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
168]
gi|221307863|ref|ZP_03589710.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
168]
gi|221312185|ref|ZP_03593990.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221317118|ref|ZP_03598412.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321381|ref|ZP_03602675.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|321313723|ref|YP_004206010.1| peptidyl-tRNA hydrolase [Bacillus subtilis BSn5]
gi|586021|sp|P37470|PTH_BACSU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; AltName:
Full=Stage V sporulation protein C
gi|467442|dbj|BAA05288.1| stage V sporulation [Bacillus subtilis]
gi|2632320|emb|CAB11829.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. subtilis str.
168]
gi|291482425|dbj|BAI83500.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. natto BEST195]
gi|320019997|gb|ADV94983.1| peptidyl-tRNA hydrolase [Bacillus subtilis BSn5]
Length = 188
Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 109/187 (58%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y RHN+GFM ID++ + KF+ G + G + +L+K
Sbjct: 1 MLVIAGLGNPGKNYENTRHNVGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ L +M++Y + + E+ VI+DDLDL G +RL+T G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECLRPLMDYYDV-DNEDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQ 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+RIGIGRP + ++ +VLG+F+ E + +D ++ + +
Sbjct: 120 HLGTSEFDRIRIGIGRPVNGMKVVDYVLGSFTKEEAPEIEEAVDKSVKACEASLSKPFLE 179
Query: 180 FLNHIVS 186
+N +
Sbjct: 180 VMNEFNA 186
>gi|188581654|ref|YP_001925099.1| peptidyl-tRNA hydrolase [Methylobacterium populi BJ001]
gi|238692873|sp|B1Z9F8|PTH_METPB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|179345152|gb|ACB80564.1| Aminoacyl-tRNA hydrolase [Methylobacterium populi BJ001]
Length = 210
Score = 259 bits (664), Expect = 9e-68, Method: Composition-based stats.
Identities = 86/185 (46%), Positives = 119/185 (64%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NRHNIGFM +D I H ++++F E +E L R IL+K
Sbjct: 1 MRLIVGLGNPGQRYARNRHNIGFMAVDEIARVHRAAPFRRRFQGEAAEVMLGSERAILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ E F+K+P L + +V+HD+LDL LR+K GGG+AGHNGL+SI+
Sbjct: 61 PQTFMNESGRSVGEAQRFFKIP-LSDVIVLHDELDLAPAKLRVKLGGGNAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG +Y+R+R+GIG P D A + +VL +F+ E ++ + A PLLA ED SF
Sbjct: 120 LCGNDYRRVRLGIGHPGDKALVHAYVLNDFAKSEEPWVEDLCRATADHAPLLAAGEDASF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNKVH 184
>gi|229009561|ref|ZP_04166788.1| Peptidyl-tRNA hydrolase [Bacillus mycoides DSM 2048]
gi|229053898|ref|ZP_04195333.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH603]
gi|229165040|ref|ZP_04292836.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH621]
gi|228618425|gb|EEK75454.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH621]
gi|228721439|gb|EEL72959.1| Peptidyl-tRNA hydrolase [Bacillus cereus AH603]
gi|228751705|gb|EEM01504.1| Peptidyl-tRNA hydrolase [Bacillus mycoides DSM 2048]
Length = 207
Score = 259 bits (664), Expect = 9e-68, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 113/187 (60%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWSISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFIVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+N A + + +
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGIKVVDYVLGRFTSEEISGVNQSIENAADACEEWLNKPFLQ 200
Query: 180 FLNHIVS 186
+N S
Sbjct: 201 IMNTFNS 207
>gi|138893725|ref|YP_001124178.1| peptidyl-tRNA hydrolase [Geobacillus thermodenitrificans NG80-2]
gi|166199333|sp|A4IJC9|PTH_GEOTN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|134265238|gb|ABO65433.1| Peptidyl-tRNA hydrolase [Geobacillus thermodenitrificans NG80-2]
Length = 186
Score = 259 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 99/186 (53%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG EY + RHNIGF ID + KF + G + L K
Sbjct: 1 MKLFVGLGNPGKEYEQTRHNIGFFVIDELAKRWNVSLKTAKFRGLFGTASVFGEKVALCK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +++FY + +++ ++I+DDLDL G +RL+ GG GHNG+KSI
Sbjct: 61 PLTYMNLSGECVCPLIDFYDIA-VDDVIIIYDDLDLPPGKIRLRLKGGSGGHNGVKSIIH 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +KR+RIGIGRP + + +VL F+ E+ ++ + A + +
Sbjct: 120 HLGTEQFKRIRIGIGRPTNGQPVADYVLSRFTEEEKPAVMEAVLRAADACEQAVTTPFIQ 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 VMNDFN 185
>gi|196250766|ref|ZP_03149453.1| Aminoacyl-tRNA hydrolase [Geobacillus sp. G11MC16]
gi|196209716|gb|EDY04488.1| Aminoacyl-tRNA hydrolase [Geobacillus sp. G11MC16]
Length = 186
Score = 259 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 99/186 (53%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG EY + RHNIGF ID + KF + G + L K
Sbjct: 1 MKLFVGLGNPGKEYEQTRHNIGFFVIDELAKRWNVSLKTAKFRGLFGTASVFGEKVALCK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +++FY + +++ ++I+DDLDL G +RL+ GG GHNG+KSI
Sbjct: 61 PLTYMNLSGECVCPLIDFYDIA-VDDVIIIYDDLDLPPGKIRLRLKGGSGGHNGVKSIIH 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +KR+RIGIGRP + + +VL F+ E+ ++ + A + +
Sbjct: 120 HLGTEQFKRIRIGIGRPTNGQPVADYVLSRFTEEEKPVVMEAVLRAADACEQAVTTPFIQ 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 VMNDFN 185
>gi|206972605|ref|ZP_03233548.1| peptidyl-tRNA hydrolase [Bacillus cereus AH1134]
gi|206732507|gb|EDZ49686.1| peptidyl-tRNA hydrolase [Bacillus cereus AH1134]
Length = 207
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVMYDDLDIPVGKLRLRMKGSAGGHNGVKSTIL 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F+S E + I+ A + + +
Sbjct: 141 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIADVNHSIEKAADACEEWLNKPFLQ 200
Query: 180 FLNHIVS 186
+N S
Sbjct: 201 IMNTFNS 207
>gi|163761600|ref|ZP_02168671.1| peptidyl-tRNA hydrolase [Hoeflea phototrophica DFL-43]
gi|162281196|gb|EDQ31496.1| peptidyl-tRNA hydrolase [Hoeflea phototrophica DFL-43]
Length = 247
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 98/185 (52%), Positives = 127/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y ++RHN+GFM D I H F + KKF EI++G++ G + +L+K
Sbjct: 1 MLLIAGLGNPGPQYAKHRHNVGFMAADAIARRHSFSGFSKKFRGEIADGEIAGEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG S+ E M FYKL + + +VIHD+LDL G LRLKTGGG GHNGLKSI
Sbjct: 61 PMTFMNLSGDSVGEAMRFYKL-SPSDIIVIHDELDLAPGKLRLKTGGGHGGHNGLKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK+YKRLR+GIG P + HVLG+FS + +L P++D IA L+AK +D F
Sbjct: 120 HCGKDYKRLRVGIGHPGHKDRVNSHVLGDFSKADLVWLEPLLDTIADHADLMAKGDDAGF 179
Query: 181 LNHIV 185
LN I
Sbjct: 180 LNKIA 184
>gi|156741710|ref|YP_001431839.1| peptidyl-tRNA hydrolase [Roseiflexus castenholzii DSM 13941]
gi|189038162|sp|A7NK01|PTH_ROSCS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|156233038|gb|ABU57821.1| Aminoacyl-tRNA hydrolase [Roseiflexus castenholzii DSM 13941]
Length = 214
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 72/187 (38%), Positives = 106/187 (56%), Gaps = 1/187 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG Y RHNIGF + + H K+ AEI+EG++ G R L
Sbjct: 1 MWLIVGLGNPGETYARTRHNIGFRVVTELAQRHHLRFTHKRAKAEIAEGEIAGQRVALAL 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQ+++ + +YK+ LV++DD+DL FG LRL+ G HNG++SI
Sbjct: 61 PQTYMNLSGQAVVGLRQWYKIDPATELLVVYDDVDLPFGVLRLRERGSAGTHNGMRSIVA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLRIGI RPP ++ +VL F+ + L + A +L L+ + V
Sbjct: 121 LLGSQVFPRLRIGIDRPPVAWNLADYVLARFTPEQEAQLPEVTRRAADALELVLREGIVV 180
Query: 180 FLNHIVS 186
+N I +
Sbjct: 181 AMNRINA 187
>gi|240144342|ref|ZP_04742943.1| aminoacyl-tRNA hydrolase [Roseburia intestinalis L1-82]
gi|257203686|gb|EEV01971.1| aminoacyl-tRNA hydrolase [Roseburia intestinalis L1-82]
Length = 212
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHNIGF +D + + +KK A +G ++G++ +L K
Sbjct: 21 MFLIVGLGNPGKQYEHTRHNIGFDVMDALAEKYNISISEKKHKALCGKGVINGVKVVLAK 80
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E++N+YK+ E +VI+DD+ L G LR++ G GHNG+K+I
Sbjct: 81 PQTYMNLSGESVAELVNYYKMDPEEEMIVIYDDISLAPGNLRIRKKGSAGGHNGIKNIIA 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +N+ R+++G+G P + HVLG+F + +R + I + + ++ E +
Sbjct: 141 MTGTQNFLRIKVGVGEKPAGWDLADHVLGHFDAADRAEVEKAIGHAVEAAEMMITGETDA 200
Query: 180 FLNHIVSVRK 189
+N +K
Sbjct: 201 AMNRYNVKKK 210
>gi|77464401|ref|YP_353905.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides 2.4.1]
gi|119390995|sp|Q3IZN0|PTH_RHOS4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|77388819|gb|ABA80004.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides 2.4.1]
Length = 225
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIG+M ++ I + H F W+ +F SEG+L + +L+K
Sbjct: 1 MKLFVGLGNPGARYAGNRHNIGYMAVEAIAADHGFGPWRARFQGLTSEGRLGSEQVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M FYKL + +V HD+LDL G LRLK GGG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVGEAMRFYKLTPA-DVIVFHDELDLAPGKLRLKQGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+GIG P + +VL +F+ ++ +L ++ I+ LA+ + F
Sbjct: 120 HVGEAYGRVRLGIGHPGHKDAVAPYVLSDFAKADQDWLADLLRGISDGAEALARGDGAKF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNAVA 184
>gi|163851897|ref|YP_001639940.1| aminoacyl-tRNA hydrolase [Methylobacterium extorquens PA1]
gi|218530648|ref|YP_002421464.1| peptidyl-tRNA hydrolase [Methylobacterium chloromethanicum CM4]
gi|240139020|ref|YP_002963495.1| Peptidyl-tRNA hydrolase (PTH) [Methylobacterium extorquens AM1]
gi|254561615|ref|YP_003068710.1| peptidyl-tRNA hydrolase [Methylobacterium extorquens DM4]
gi|238687354|sp|A9W5L3|PTH_METEP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783876|sp|B7KNU7|PTH_METC4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|163663502|gb|ABY30869.1| Aminoacyl-tRNA hydrolase [Methylobacterium extorquens PA1]
gi|218522951|gb|ACK83536.1| Aminoacyl-tRNA hydrolase [Methylobacterium chloromethanicum CM4]
gi|240008992|gb|ACS40218.1| Peptidyl-tRNA hydrolase (PTH) [Methylobacterium extorquens AM1]
gi|254268893|emb|CAX24854.1| Peptidyl-tRNA hydrolase (PTH) [Methylobacterium extorquens DM4]
Length = 210
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 86/185 (46%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NRHNIGFM +D I H ++++F E +E L R IL+K
Sbjct: 1 MRLIVGLGNPGARYARNRHNIGFMAVDEIARVHRAAPFRRRFQGEAAEVMLGSERAILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ E F+K+P L + +V+HD+LDL LR+K GGG+AGHNGL+SI+
Sbjct: 61 PQTFMNESGRSVGEAQRFFKIP-LADVIVLHDELDLAPAKLRVKLGGGNAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG Y+R+R+GIG P D A + +VL +F+ E ++ + A PLLA ED SF
Sbjct: 120 LCGNEYRRVRLGIGHPGDKALVHAYVLNDFAKSEEPWVEDLCRATADHAPLLAAGEDASF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNKVH 184
>gi|291561351|emb|CBL40150.1| peptidyl-tRNA hydrolase [butyrate-producing bacterium SS3/4]
Length = 191
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 107/190 (56%), Gaps = 3/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG EY RHN GFM +D + +KK A +G + G + IL+K
Sbjct: 1 MLIIAGLGNPGKEYENTRHNAGFMVMDALAEKIGADISEKKHKALCGKGVIGGEKVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++YK+ + E+ L+++DD+ L G LR++ G GHNG+KSI
Sbjct: 61 PQTYMNSSGESIRAAADYYKV-DPEDILIVYDDISLAPGQLRIRAKGSAGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G P + +VLG+FS E+ + + A ++ +
Sbjct: 120 HLGTQEFPRVKVGVGEKPSRMDLADYVLGHFSKEEQATMDEAVKEAADAVCEIVNVGIAQ 179
Query: 180 FLNHIVSVRK 189
+N + +K
Sbjct: 180 AMND-HNRKK 188
>gi|291540814|emb|CBL13925.1| peptidyl-tRNA hydrolase [Roseburia intestinalis XB6B4]
Length = 212
Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHNIGF +D + + +KK A +G ++G++ +L K
Sbjct: 21 MFLIVGLGNPGKQYEHTRHNIGFDVMDALAEKYNISISEKKHKALCGKGVINGVKVVLAK 80
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E++N+YK+ E +VI+DD+ L G LR++ G GHNG+K+I
Sbjct: 81 PQTYMNLSGESVAELVNYYKMDPEEEMIVIYDDISLAPGNLRIRKKGSAGGHNGIKNIIA 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +N+ R+++G+G P + HVLG+F + +R + I + + ++ E +
Sbjct: 141 MTGTQNFLRIKVGVGEKPAGWDLADHVLGHFDTADRAEVEKAIGHAVEAAEMMITGETDA 200
Query: 180 FLNHIVSVRK 189
+N +K
Sbjct: 201 AMNRYNVKKK 210
>gi|225028226|ref|ZP_03717418.1| hypothetical protein EUBHAL_02498 [Eubacterium hallii DSM 3353]
gi|224954538|gb|EEG35747.1| hypothetical protein EUBHAL_02498 [Eubacterium hallii DSM 3353]
Length = 717
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 114/193 (59%), Gaps = 7/193 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP +Y RHN+G+M IDRI + + KF A + G + G + +L+K
Sbjct: 522 MKVIVGLGNPTDQYKGTRHNVGYMAIDRIAEANRININQHKFKAMVGSGIIGGSKVLLVK 581
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M+FYKL +L + LVI+DD+ L+ G LRL+T G GHNG+KSI +
Sbjct: 582 PLTYMNLSGESIRPIMDFYKL-DLSDILVIYDDISLEPGMLRLRTKGSAGGHNGMKSIIK 640
Query: 121 KCGKN-YKRLRIGIG---RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G + + R+R+GIG P + +VLG+F E+ L +D ++ L A+ E
Sbjct: 641 HLGGDTFPRIRVGIGGEKHPG--QDLADYVLGHFKDDEKELLSDALDKAEKAAELFAQDE 698
Query: 177 DVSFLNHIVSVRK 189
+N +K
Sbjct: 699 FSEAMNKYSVGKK 711
>gi|291535573|emb|CBL08685.1| peptidyl-tRNA hydrolase [Roseburia intestinalis M50/1]
Length = 212
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHNIGF +D + + +KK A +G ++G++ +L K
Sbjct: 21 MFLIVGLGNPGKQYEHTRHNIGFDVMDALAEKYNISISEKKHKALCGKGVINGVKVVLAK 80
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E++N+YK+ E +VI+DD+ L G LR++ G GHNG+K+I
Sbjct: 81 PQTYMNLSGESVTELVNYYKMDPEEEMIVIYDDISLAPGNLRIRKKGSAGGHNGIKNIIA 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +N+ R+++G+G P + HVLG+F + +R + I + + ++ E +
Sbjct: 141 MTGTQNFLRIKVGVGEKPAGWDLADHVLGHFDTADRAEVEKAIGHAVEAAEMMITGETDA 200
Query: 180 FLNHIVSVRK 189
+N +K
Sbjct: 201 AMNRYNVKKK 210
>gi|149916126|ref|ZP_01904648.1| peptidyl-tRNA hydrolase [Roseobacter sp. AzwK-3b]
gi|149809981|gb|EDM69830.1| peptidyl-tRNA hydrolase [Roseobacter sp. AzwK-3b]
Length = 237
Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 89/186 (47%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM IDRI H F WK KF EI+EGQL G + +L+K
Sbjct: 6 MLLFVGLGNPGAKYAGNRHNIGFMAIDRIAKDHGFGPWKGKFQGEIAEGQLGGQKVMLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E M FYKL + V HD+LDL G +R+K GGG AGHNG++SI +
Sbjct: 66 PGTFMNLSGQSVGEAMRFYKLEPG-DVTVFHDELDLAPGKVRVKIGGGHAGHNGMRSIHQ 124
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y+R+R+GIG P + ++VL +F+ + +L ++ I+ LA F
Sbjct: 125 HVGEAYQRVRLGIGHPGRKELVAQYVLQDFAKADADWLDDLMRGISDGAAELAAGRKDRF 184
Query: 181 LNHIVS 186
LN I
Sbjct: 185 LNAIAQ 190
>gi|260427319|ref|ZP_05781298.1| peptidyl-tRNA hydrolase [Citreicella sp. SE45]
gi|260421811|gb|EEX15062.1| peptidyl-tRNA hydrolase [Citreicella sp. SE45]
Length = 226
Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 83/185 (44%), Positives = 119/185 (64%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I GLGNPG +Y +NRHNIGFM +DRI H F W+ +F E+SEG+L G + +L+K
Sbjct: 1 MQIFVGLGNPGGKYAKNRHNIGFMAVDRIAEDHGFGPWRTRFQGEVSEGRLGGEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSGQS+ E M F+KL + V+HD+LDL G R+K+GGG AGHNGL+SI +
Sbjct: 61 PGTYMNLSGQSVGEAMRFFKLTPA-DVTVLHDELDLAPGKCRVKSGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y+R+R+GIG P + +VL +F+ + +L ++ I+ LA+ + F
Sbjct: 120 HIGEAYRRVRLGIGHPGRKELVAGYVLHDFAKADETWLDDLLRGISDGAKALAEGDASGF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNAVA 184
>gi|126727671|ref|ZP_01743503.1| peptidyl-tRNA hydrolase [Rhodobacterales bacterium HTCC2150]
gi|126703087|gb|EBA02188.1| peptidyl-tRNA hydrolase [Rhodobacterales bacterium HTCC2150]
Length = 229
Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 85/182 (46%), Positives = 115/182 (63%), Gaps = 1/182 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I AGLGNPG +Y NRHNIGFM +D I H F W+ KF AEIS+G+L G + +LIK
Sbjct: 1 MIIFAGLGNPGTKYANNRHNIGFMVLDEIAHAHSFSQWRSKFQAEISDGKLAGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E M FYK + + V HD++DL +R+K GGG AGHNGL+SI +
Sbjct: 61 PMTFMNLSGQSIGEAMRFYKC-DSTDVTVFHDEIDLAPAKVRVKDGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F+ ++ +L +I P LA + F
Sbjct: 120 HIGPHYGRVRLGVGHPGHKDRVPGYVLSDFAKADQTWLDDVIRGCGEGAPELAAGDAPKF 179
Query: 181 LN 182
+N
Sbjct: 180 MN 181
>gi|255659622|ref|ZP_05405031.1| aminoacyl-tRNA hydrolase [Mitsuokella multacida DSM 20544]
gi|260848183|gb|EEX68190.1| aminoacyl-tRNA hydrolase [Mitsuokella multacida DSM 20544]
Length = 216
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 72/188 (38%), Positives = 113/188 (60%), Gaps = 4/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA--WKKKFHAEISEGQLDGLRTIL 58
M I+AGLGNPG EY + +HN+GFM ID + A WK KF A++++ ++ + +L
Sbjct: 1 MKIIAGLGNPGAEYAKTKHNVGFMFIDALADALGLSASDWKDKFEAKVADARIGTEKVVL 60
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KPQT+MN SG+++ +MN+YKL E+ +V+HDD+D+ GT+R++ G GHNG+KSI
Sbjct: 61 VKPQTYMNESGRAVGPLMNWYKLAP-EDLIVVHDDMDIPAGTIRIRKKGSAGGHNGIKSI 119
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + R+RIGIGRP ++ HVL F E+ + ID + ++ + +
Sbjct: 120 LAHVGDEHFARVRIGIGRPLPGWTVVNHVLAGFPEEEQPKIREAIDYLIPAVECIVTHDV 179
Query: 178 VSFLNHIV 185
+N
Sbjct: 180 DMAMNQFN 187
>gi|152973899|ref|YP_001373416.1| peptidyl-tRNA hydrolase [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|189038278|sp|A7GJW3|PTH_BACCN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|152022651|gb|ABS20421.1| Aminoacyl-tRNA hydrolase [Bacillus cytotoxicus NVH 391-98]
Length = 186
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 1 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGMFGAGFVNGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ +LE++++++DDLDL G LRL+ G GHNG+KS
Sbjct: 61 PLTYMNLSGESIRPLMDYYKI-DLEDFIIMYDDLDLPVGKLRLRMKGSAGGHNGVKSTIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + ++R+R+GI RP + ++ +VLG F++ E + I+ A + + +
Sbjct: 120 HLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTAEEMVDVNHAIEKAANACEEWLNKSFLQ 179
Query: 180 FLNHIVS 186
+N +
Sbjct: 180 VMNDFNN 186
>gi|225387032|ref|ZP_03756796.1| hypothetical protein CLOSTASPAR_00782 [Clostridium asparagiforme
DSM 15981]
gi|225046850|gb|EEG57096.1| hypothetical protein CLOSTASPAR_00782 [Clostridium asparagiforme
DSM 15981]
Length = 212
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNP EY + RHN+GF ID + F +KKF + + G + IL+K
Sbjct: 22 MYIIAGLGNPTKEYEKTRHNVGFEVIDVLADRLFTSVDEKKFKGYYGKAVIGGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ +FYK+ + ++ +V++DD+ LD G LR++T G GHNG+K+I
Sbjct: 82 PQTFMNLSGESVRAAADFYKV-DPDHIIVVYDDVSLDVGQLRIRTKGSAGGHNGIKNIIA 140
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G P + +VLG F ER + A ++ ++ + +
Sbjct: 141 HLGTQEFPRIKVGVGNKPPRMDLADYVLGRFPREERGLMEDAFKEAAEAVEVMIQEGAGT 200
Query: 180 FLNHIVSVR 188
+N +
Sbjct: 201 AMNRFNGHK 209
>gi|163734578|ref|ZP_02142017.1| peptidyl-tRNA hydrolase [Roseobacter litoralis Och 149]
gi|161392071|gb|EDQ16401.1| peptidyl-tRNA hydrolase [Roseobacter litoralis Och 149]
Length = 247
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 80/184 (43%), Positives = 113/184 (61%), Gaps = 1/184 (0%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y +RHNIGFM +DRI + H F AWK K ISEG+ R IL+KP
Sbjct: 16 KLIVGLGNPGPKYAGHRHNIGFMALDRIAADHGFTAWKDKHQGSISEGRFGSDRAILLKP 75
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS+ M FYKL ++ +V+HD++DL G ++ K GGG AGHNGL+SI
Sbjct: 76 LTFMNNSGQSVQAAMRFYKLEP-KDVIVLHDEIDLAPGKVKHKVGGGHAGHNGLRSIHAH 134
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G Y R+R+G+G P + +VL +F+ ++ +L ++ ++ P LA E F
Sbjct: 135 IGPEYARVRLGVGHPGHKDRVPGYVLHDFAKADQNWLDDVLRGVSDGAPFLAATEAAKFS 194
Query: 182 NHIV 185
N +
Sbjct: 195 NAVA 198
>gi|209886301|ref|YP_002290158.1| peptidyl-tRNA hydrolase [Oligotropha carboxidovorans OM5]
gi|226707538|sp|B6JIP3|PTH_OLICO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|209874497|gb|ACI94293.1| peptidyl-tRNA hydrolase [Oligotropha carboxidovorans OM5]
Length = 201
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 79/185 (42%), Positives = 113/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F W+++F E SEG L G R +L+K
Sbjct: 1 MRLFVGLGNPGSKYEGNRHNIGFMVVDEIARRHGFSPWRRRFQGETSEGVLGGERVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E F+KL E +V HD+++L +R+K GGG AGHNGL+SIS
Sbjct: 61 PATYMNESGRAVQEAAKFFKLGESE-VVVFHDEIELPPAKMRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y+R+R+G+G P + HVL +F+ ER ++ + + +A LL +D F
Sbjct: 120 HLGNEYRRVRLGVGHPGVKEIVHIHVLNDFAKSERPWVAALCETVAEHAELLVSGKDSQF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNRVH 184
>gi|39937415|ref|NP_949691.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris CGA009]
gi|192293198|ref|YP_001993803.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris TIE-1]
gi|68052965|sp|Q6N1P9|PTH_RHOPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|229485511|sp|B3Q7X3|PTH_RHOPT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|39651274|emb|CAE29796.1| putative peptidyl-tRNA hydrolase [Rhodopseudomonas palustris
CGA009]
gi|192286947|gb|ACF03328.1| Aminoacyl-tRNA hydrolase [Rhodopseudomonas palustris TIE-1]
Length = 206
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM ID I H F W+++F E ++G LDG R L+K
Sbjct: 1 MRLFVGLGNPGAKYQGNRHNIGFMVIDEIARRHGFSPWRRRFQGETADGVLDGERITLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ + +FYK+ E V HD+++L +R+K GGG AGHNGL+SIS
Sbjct: 61 PLTYMNESGRAVQDAASFYKIGQNE-IAVFHDEIELPPAKVRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + HVLG+F+ ER ++ + + A + L+AK +D SF
Sbjct: 120 HIGNDYLRVRLGVGHPGAKELVHNHVLGDFAKSERPWVEALCEIAADNAGLIAKGKDASF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 ANKVH 184
>gi|319654944|ref|ZP_08009018.1| peptidyl-tRNA hydrolase [Bacillus sp. 2_A_57_CT2]
gi|317393369|gb|EFV74133.1| peptidyl-tRNA hydrolase [Bacillus sp. 2_A_57_CT2]
Length = 186
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 103/187 (55%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHNIGF ID + P + K G ++G + L+K
Sbjct: 1 MKLIVGLGNPGKQYDKTRHNIGFDVIDVLSDRLNIPLNQAKLKGVFGTGYVNGEKVFLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ VM+++++ + E +VI+DDLDL G +RL+ G GHNG+KS
Sbjct: 61 PLTYMNLSGESIRAVMDYFEINDDE-LVVIYDDLDLPVGKIRLRQKGSAGGHNGIKSTIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GI RPP + +VLG F+ E+ + A + K+ +
Sbjct: 120 HLGTQEFNRIRVGIDRPPSGMKVPDYVLGRFTKEEQAIMDETAKKCADACEEWFKKPFLQ 179
Query: 180 FLNHIVS 186
+N
Sbjct: 180 VMNDFNQ 186
>gi|221640291|ref|YP_002526553.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides KD131]
gi|254783885|sp|B9KMG1|PTH_RHOSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|221161072|gb|ACM02052.1| Peptidyl-tRNA hydrolase [Rhodobacter sphaeroides KD131]
Length = 225
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIG+M ++ I + H F W+ +F SEG+L + +L+K
Sbjct: 1 MKLFVGLGNPGARYAGNRHNIGYMAVEAIAADHGFGPWRARFQGLTSEGRLGSEQVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M FYKL + +V HD+LDL G LRLK GGG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVGEAMRFYKLTPA-DVIVFHDELDLAPGKLRLKQGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+GIG P + +VL +F+ ++ +L ++ I+ LA+ + F
Sbjct: 120 HVGEAYGRVRLGIGHPGHKDAVAAYVLNDFAKADQDWLADLLRGISDGAEALARGDGAKF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNAVA 184
>gi|27382551|ref|NP_774080.1| peptidyl-tRNA hydrolase [Bradyrhizobium japonicum USDA 110]
gi|46576801|sp|Q89DJ9|PTH_BRAJA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|27355723|dbj|BAC52705.1| peptidyl-tRNA hydrolase [Bradyrhizobium japonicum USDA 110]
Length = 201
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F W+++F E SEG L R IL+K
Sbjct: 1 MRLFVGLGNPGAKYARNRHNIGFMAVDEIARRHGFSPWRRRFQGETSEGALGTERVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ E F+K+ + V HD+L+L G +R+K GGG AGHNGL+SIS
Sbjct: 61 PTTYMNDSGRSVQEAAGFFKIAPG-DVTVFHDELELPPGKVRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+R+GIG P + HVL +F+ + ++ + D +A L+AK D +F
Sbjct: 120 HIGNDYRRVRLGIGHPGVKELVHGHVLSDFAKADNDWVATLCDAVAEHAALIAKGTDATF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 ANRVH 184
>gi|146276404|ref|YP_001166563.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides ATCC 17025]
gi|166229442|sp|A4WPE4|PTH_RHOS5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145554645|gb|ABP69258.1| peptidyl-tRNA hydrolase [Rhodobacter sphaeroides ATCC 17025]
Length = 225
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 83/185 (44%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIG+M ++ I S H F W+ +F SEG+L + +L+K
Sbjct: 1 MKLFVGLGNPGARYAGNRHNIGYMAVEAIASAHGFGPWRSRFQGVTSEGRLGAEQVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M FYKL + + V HD+LDL G LRLK GGG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVGEAMRFYKL-SPADLTVFHDELDLAPGRLRLKQGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+GIG P + +VL +F+ ++ +L ++ IA LA+ + F
Sbjct: 120 HVGEAYGRVRLGIGHPGHKDAVASYVLNDFAKADQGWLEDLLRGIADGAEALARGDGARF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNAVA 184
>gi|160939695|ref|ZP_02087043.1| hypothetical protein CLOBOL_04587 [Clostridium bolteae ATCC
BAA-613]
gi|158437486|gb|EDP15250.1| hypothetical protein CLOBOL_04587 [Clostridium bolteae ATCC
BAA-613]
Length = 230
Score = 257 bits (658), Expect = 5e-67, Method: Composition-based stats.
Identities = 64/189 (33%), Positives = 107/189 (56%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNP EY + RHN+GF ID + +KKF G + G + +L+K
Sbjct: 42 MYIIAGLGNPTREYEKTRHNVGFEVIDVLADRLGTTVEEKKFKGCYGRGIIGGQKVLLLK 101
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ +FYK+ + E+ ++++DD+ LD G LR++ G GHNG+K+I
Sbjct: 102 PQTFMNLSGESVRAAADFYKV-DPEHIIIVYDDISLDVGQLRIRKKGSAGGHNGIKNIIS 160
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G P + +VL FS +R + A ++ ++ + +
Sbjct: 161 HLGTQEFPRIKVGVGDKPKKMDLADYVLSRFSKEDRAVMEDAFREAAGAVEMMITQGADA 220
Query: 180 FLNHIVSVR 188
+N +
Sbjct: 221 AMNQFNGHK 229
>gi|294678567|ref|YP_003579182.1| aminoacyl-tRNA hydrolase [Rhodobacter capsulatus SB 1003]
gi|294477387|gb|ADE86775.1| aminoacyl-tRNA hydrolase [Rhodobacter capsulatus SB 1003]
Length = 229
Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats.
Identities = 88/185 (47%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +DRI + H F WKK F +SEG+ R IL+K
Sbjct: 1 MQLWVGLGNPGTKYAANRHNIGFMAVDRIAADHGFAPWKKAFQGHVSEGRFGSTRVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ +FYK+P +E V HD+LDL G LRLK GGG AGHNGL+SI +
Sbjct: 61 PETFMNLSGQSVRAAADFYKIP-VEAITVFHDELDLAPGKLRLKQGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+GIG P D + +VL +F+ E +L ++ ++ LA + F
Sbjct: 120 HMGEAYARVRLGIGHPGDKDRVAGYVLSDFAKAEAAWLDDLMRGLSDGAAALAAGDGAKF 179
Query: 181 LNHIV 185
LN +
Sbjct: 180 LNAVA 184
>gi|229542277|ref|ZP_04431337.1| peptidyl-tRNA hydrolase [Bacillus coagulans 36D1]
gi|229326697|gb|EEN92372.1| peptidyl-tRNA hydrolase [Bacillus coagulans 36D1]
Length = 185
Score = 256 bits (656), Expect = 8e-67, Method: Composition-based stats.
Identities = 68/183 (37%), Positives = 106/183 (57%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y RHNIGF ++ + P + KF +E ++ + +L+K
Sbjct: 1 MKCIVGLGNPGAQYEHTRHNIGFEVVNLLAERLQAPFKQSKFKGLCAETTVNSGKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ VM++Y+L + LV++DDLDL G +RL+ G GHNG+KSI
Sbjct: 61 PMTYMNLSGESVKAVMDYYRLGTG-DLLVVYDDLDLPPGKIRLRQKGSAGGHNGIKSIIH 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+RIGIGRP A++ +VLG FS +R + ++ A + ++
Sbjct: 120 HLGTQEFNRIRIGIGRPDRDAYMPDYVLGRFSKEDREKMQLAVEKGADACEAWLEKPFPV 179
Query: 180 FLN 182
+N
Sbjct: 180 VMN 182
>gi|210608665|ref|ZP_03287942.1| hypothetical protein CLONEX_00121 [Clostridium nexile DSM 1787]
gi|210152922|gb|EEA83928.1| hypothetical protein CLONEX_00121 [Clostridium nexile DSM 1787]
Length = 224
Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats.
Identities = 65/183 (35%), Positives = 107/183 (58%), Gaps = 1/183 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNP +Y RHN GF ID + + +K A +G + G + +L+K
Sbjct: 34 MFVIVGLGNPTAQYEGTRHNAGFDVIDVLAEKYNISVDARKCRAFCGKGVIAGQKVLLVK 93
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ ++N+YK+ + LVI+DD+ LD G LR++ G GHNG+KSI
Sbjct: 94 PQTYMNLSGESVGGIVNYYKIDPESDLLVIYDDISLDVGQLRIRKKGSAGGHNGIKSIIA 153
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+++G+G P + +VLG+FS ER + ++ + ++ + + E +
Sbjct: 154 HLGTTVFPRIKVGVGEKPKNYDLADYVLGHFSKQERELMEEGYEHASDAVEQIVQGEIEA 213
Query: 180 FLN 182
+N
Sbjct: 214 AMN 216
>gi|319406825|emb|CBI80458.1| Peptidyl-tRNA hydrolase [Bartonella sp. 1-1C]
Length = 196
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 98/183 (53%), Positives = 127/183 (69%), Gaps = 1/183 (0%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++AGLGNPG Y NRHNIGFM I+ IH F W KKF AEIS G ++ + ILIKPQ
Sbjct: 2 LIAGLGNPGSHYNNNRHNIGFMAINVIHQIFSFSPWSKKFQAEISNGFINDEKIILIKPQ 61
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSGQS+ E + FYKL +L N +VI+D+LDL G +R+K GGG GHNG+KSI C
Sbjct: 62 TFMNLSGQSIGEALRFYKL-DLNNLIVIYDELDLPPGKIRIKIGGGSNGHNGIKSIDSHC 120
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
G NY RLR+GIG P + ++VLGNF+ ++ +L P++D IA ++ LL KR + F+N
Sbjct: 121 GTNYCRLRLGIGHPGPKELVNQYVLGNFTKSDQEWLAPLLDAIANNMELLIKRNNNCFMN 180
Query: 183 HIV 185
I
Sbjct: 181 KIT 183
>gi|260887179|ref|ZP_05898442.1| aminoacyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
gi|330839054|ref|YP_004413634.1| peptidyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
gi|260863241|gb|EEX77741.1| aminoacyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
gi|329746818|gb|AEC00175.1| peptidyl-tRNA hydrolase [Selenomonas sputigena ATCC 35185]
Length = 218
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 114/190 (60%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG EY +HN+GFM +D + AW++KF+A +EG++ + +L+K
Sbjct: 1 MKIIAGLGNPGAEYARTKHNVGFMLVDALAERLGVDAWREKFNALTAEGRIGAQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ ++++YKL E+ +V HDD+D+ GT+RL+ G GHNG+KS+
Sbjct: 61 PLTYMNESGRAVGPLLDWYKLAP-EDLIVAHDDMDIAAGTIRLRRKGSAGGHNGIKSLLA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ R+RIGIGRP +++HVL F + + + I + ++ +
Sbjct: 120 HIGSEDFSRVRIGIGRPLPGWTVVKHVLAPFPADDAPKIQEAISYLLPAVECIVTDGIDM 179
Query: 180 FLNHIVSVRK 189
+N RK
Sbjct: 180 AMNRYNPRRK 189
>gi|154246547|ref|YP_001417505.1| peptidyl-tRNA hydrolase [Xanthobacter autotrophicus Py2]
gi|238686725|sp|A7IIK5|PTH_XANP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|154160632|gb|ABS67848.1| Aminoacyl-tRNA hydrolase [Xanthobacter autotrophicus Py2]
Length = 202
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 80/187 (42%), Positives = 119/187 (63%), Gaps = 1/187 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF+ AGLGNPG +Y NRHNIGFM ++ I H +++F + +EG++ G + I +
Sbjct: 1 MFLFAGLGNPGPKYAGNRHNIGFMALEAICRRHRLGPLRRRFQSLAAEGEIAGEKVIALF 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MN SG+++ E FYK+P L++ V HD+LDL LR+K GGG+AGHNGL+SI+
Sbjct: 61 PETYMNESGRAVSEAQRFYKIP-LDHIFVFHDELDLPPAKLRIKKGGGNAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+CG +Y R+R+GIG P D A + +VL +F+ E+ +L + D A LLA++ F
Sbjct: 120 QCGNDYFRVRLGIGHPGDKALVHAYVLNDFAKSEKPWLDAVCDACADFADLLAQKRPEEF 179
Query: 181 LNHIVSV 187
N
Sbjct: 180 QNRAHLF 186
>gi|299134268|ref|ZP_07027461.1| peptidyl-tRNA hydrolase [Afipia sp. 1NLS2]
gi|298591015|gb|EFI51217.1| peptidyl-tRNA hydrolase [Afipia sp. 1NLS2]
Length = 201
Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats.
Identities = 82/185 (44%), Positives = 119/185 (64%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D + H F W+++F E SEG LDG R IL+K
Sbjct: 1 MRLFVGLGNPGSKYEGNRHNIGFMVLDEMARRHGFSPWRRRFQGETSEGVLDGERVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E NF+KL + +V HD+++L +R+K GGG AGHNGL+SIS
Sbjct: 61 PATYMNESGRAVQEAANFFKLGE-SDVVVFHDEIELPPAKVRVKVGGGIAGHNGLRSISS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G YKR+R+G+G P + HVL +F+ ER ++ + D ++ + LLA+ +D +F
Sbjct: 120 HVGNEYKRVRMGVGHPGVKELVHIHVLNDFAKAERPWVEALCDIVSDNAALLAQGKDSAF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNKVH 184
>gi|313635143|gb|EFS01469.1| peptidyl-tRNA hydrolase [Listeria seeligeri FSL N1-067]
gi|313639811|gb|EFS04541.1| peptidyl-tRNA hydrolase [Listeria seeligeri FSL S4-171]
Length = 184
Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 113/186 (60%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ +SE ++G + +L+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMVSEININGEKMLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ L+++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVLIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPSH-GEVINYVLGDFPKAEQPDIIEAIQKSADAIEDFARTPFIE 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 IMNKYN 184
>gi|254438461|ref|ZP_05051955.1| peptidyl-tRNA hydrolase [Octadecabacter antarcticus 307]
gi|198253907|gb|EDY78221.1| peptidyl-tRNA hydrolase [Octadecabacter antarcticus 307]
Length = 241
Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats.
Identities = 79/185 (42%), Positives = 120/185 (64%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +NRHNIGFM +DRI + H F W+ KF +++EG+L + +L+K
Sbjct: 1 MKLFVGLGNPGAKYAQNRHNIGFMALDRIAADHGFAPWRSKFQGQLTEGRLGRDKILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E + FYKL + + +V HD++DL +RLK+GGG AGHNGL+SI +
Sbjct: 61 PETFMNLSGQSVGEAVRFYKL-DSTDVVVFHDEIDLAPAKVRLKSGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+Y R+R+G+G P + +VL +F+ ++ +L ++ ++ LA E F
Sbjct: 120 HISPHYDRVRLGVGHPGHKDRVPGYVLSDFAKADQNWLDDVLRGMSDGAAYLADNEGPKF 179
Query: 181 LNHIV 185
LN +
Sbjct: 180 LNAVA 184
>gi|212637895|ref|YP_002314415.1| peptidyl-tRNA hydrolase SpoVC [Anoxybacillus flavithermus WK1]
gi|212559375|gb|ACJ32430.1| Peptidyl-tRNA hydrolase SpoVC [Anoxybacillus flavithermus WK1]
Length = 207
Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG EY + RHN+GFM ID + + KF + G + G + IL KP
Sbjct: 23 KLFVGLGNPGKEYEQTRHNVGFMVIDELAHRWGLSLNQTKFQGIFTSGMISGEKVILCKP 82
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+ + +M++Y + ++++ +VI+DDLDL GT+RL+ G GHNG+KS+
Sbjct: 83 LTYMNLSGECVRPLMDYYNI-DVDDLIVIYDDLDLSTGTVRLRPKGSAGGHNGMKSLIHH 141
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ +KR+RIGI RP + + +VLG +++ E+ + I A + K
Sbjct: 142 LKTEQFKRIRIGIDRPKNGMRVSDYVLGRWTAEEKIQIEQAIQKAADACERSLKISFAQV 201
Query: 181 LNHIV 185
+N
Sbjct: 202 MNEFN 206
>gi|254449448|ref|ZP_05062885.1| peptidyl-tRNA hydrolase [Octadecabacter antarcticus 238]
gi|198263854|gb|EDY88124.1| peptidyl-tRNA hydrolase [Octadecabacter antarcticus 238]
Length = 282
Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats.
Identities = 78/185 (42%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +NRHNIGFM +DRI + H F W+ KF +++E +L + +L+K
Sbjct: 39 MKLFVGLGNPGAKYAQNRHNIGFMALDRIAADHGFAPWRSKFQGQLTEERLGRDKVLLLK 98
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E + FYKL + + +V HD++DL +RLK+GGG AGHNGL+SI +
Sbjct: 99 PETFMNLSGQSVGEAVRFYKL-DSTDVVVFHDEIDLAPAKVRLKSGGGHAGHNGLRSIHQ 157
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+Y R+R+G+G P + +VL +F+ ++ +L ++ I+ LA F
Sbjct: 158 HISPHYDRVRLGVGHPGHKDRVPGYVLSDFAKADQNWLDDVLRGISDGAAYLADDAGPKF 217
Query: 181 LNHIV 185
LN +
Sbjct: 218 LNAVA 222
>gi|319405259|emb|CBI78870.1| Peptidyl-tRNA hydrolase [Bartonella sp. AR 15-3]
Length = 197
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 97/185 (52%), Positives = 127/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y NRHNIGFM ++ IH FP W KKF AEIS ++ + ILIK
Sbjct: 1 MLLIAGLGNPGAHYKNNRHNIGFMAVNVIHQTFSFPPWSKKFQAEISTNFINNEKIILIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E + FYKL +L N +VI+D+LDL G +R+K GGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIREALRFYKL-DLNNLIVIYDELDLLPGKIRIKIGGGSNGHNGIKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG NY R+R+GIG P + ++VLGNF ++ +L P++D IA ++ LL KR + F
Sbjct: 120 HCGTNYCRIRLGIGHPGPKELVNQYVLGNFIKSDQEWLTPLLDAIANNMELLIKRNNNCF 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIT 184
>gi|317126793|ref|YP_004093075.1| peptidyl-tRNA hydrolase [Bacillus cellulosilyticus DSM 2522]
gi|315471741|gb|ADU28344.1| peptidyl-tRNA hydrolase [Bacillus cellulosilyticus DSM 2522]
Length = 204
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 76/186 (40%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHN+GF IDR + KF ++G + L+K
Sbjct: 20 MKLVVGLGNPGSKYDGTRHNVGFEVIDRCQQLFQLDLDQSKFKGIYGYKVIEGEKIFLLK 79
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S++ +M ++K+P E+ LVI+DDLDL G +RL+ GG GHNG+KSI
Sbjct: 80 PLTFMNLSGESVIPLMKYFKIPT-EDLLVIYDDLDLAPGKIRLRQKGGAGGHNGMKSIIS 138
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+RIGIGRPP + +VLG+FS+ ER + I+ A+++ K ++
Sbjct: 139 HLGTEEFNRIRIGIGRPPKGYAVPDYVLGSFSNEERNAVDESIETAAKAVDAWTKDSFIN 198
Query: 180 FLNHIV 185
+N
Sbjct: 199 VMNTFN 204
>gi|157690835|ref|YP_001485297.1| peptidyl-tRNA hydrolase [Bacillus pumilus SAFR-032]
gi|167011990|sp|A8F920|PTH_BACP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157679593|gb|ABV60737.1| stage V sporulation aminoacyl-tRNA hydrolase [Bacillus pumilus
SAFR-032]
Length = 188
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M GLGNPG EY + RHN+GFM ID + P + KFH + G + G + +L+K
Sbjct: 1 MIAFVGLGNPGKEYEKTRHNVGFMTIDELSKKWDIPLNQSKFHGQFGTGFVSGQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M++Y +P LE+ VI+DDLDL G +RL+T G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECVRPLMDYYDIP-LEHLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R RIGIGRP + ++ +VLG FS E+ + I + + +
Sbjct: 120 HLGSPEFDRFRIGIGRPQNGMKVVDYVLGRFSEEEQPDIASAIQASVEACEAALTKPFLE 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 VMNDFN 185
>gi|37525972|ref|NP_929316.1| peptidyl-tRNA hydrolase [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|46576711|sp|Q7N5A1|PTH_PHOLL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|36785401|emb|CAE14348.1| peptidyl-tRNA hydrolase [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 196
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + + G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLARSHNQSLKEESKFFGYTARINICGHDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S++ + +FY++ + LV HD+LDL G ++K GG GHNGLK I
Sbjct: 65 PTTFMNLSGKSVVALASFYRI-QPDEILVAHDELDLPPGVAKMKLGGSHGGHNGLKDIQN 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG + E+ + ID R +L K++
Sbjct: 124 KFGNNPNFYRLRIGIGHPGDKNKVVGFVLGKPPASEQQLIDDAIDEARRCTDILMKQDMD 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAINRLHSFK 193
>gi|205371996|ref|ZP_03224814.1| peptidyl-tRNA hydrolase [Bacillus coahuilensis m4-4]
Length = 185
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG ++ RHNIGF ID + + KF S + +G + IL+K
Sbjct: 1 MKLIVGLGNPGAKFDGTRHNIGFEVIDELAKRFNVALDQSKFKGVYSIVRHEGEKFILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++Y + ++E+ +VI+DDLDL G LRL+ G GHNG+KS
Sbjct: 61 PLTYMNLSGESIRPLMDYYDI-DIEDLVVIYDDLDLPVGKLRLRQKGSAGGHNGMKSTIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+G+ RPP + +VLG F++ E+ + ++ A + K +S
Sbjct: 120 HLGSQQFNRIRLGVDRPPSGMTVPNYVLGKFTASEQPLVEEVVKASADACEAWLKEPFLS 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 VMNKFN 185
>gi|320161445|ref|YP_004174669.1| peptidyl-tRNA hydrolase [Anaerolinea thermophila UNI-1]
gi|319995298|dbj|BAJ64069.1| peptidyl-tRNA hydrolase [Anaerolinea thermophila UNI-1]
Length = 208
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 85/189 (44%), Positives = 110/189 (58%), Gaps = 2/189 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG EY ENRHN GFM IDR+ + + A I+ GQ G R IL KP
Sbjct: 18 FLIVGLGNPGREYRENRHNAGFMFIDRLAKALLITPGRVQSKAIIATGQYAGKRLILAKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSGQS+ + FYK+P E LV HDDLDL GTLRL+ GGG AG G+ SI ++
Sbjct: 78 QTYMNLSGQSVKGLAQFYKIPP-EQILVAHDDLDLPLGTLRLRPGGGSAGQKGVSSIIQQ 136
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLRIGIGRPP +VL +FS E+ L ++D ++ + +
Sbjct: 137 LGTSQFCRLRIGIGRPPGQMDPAAYVLQDFSEKEKEILDEVMDRAVKAALRFVEAGIQTA 196
Query: 181 LNHIVSVRK 189
+N K
Sbjct: 197 MNEFNGSVK 205
>gi|229917411|ref|YP_002886057.1| peptidyl-tRNA hydrolase [Exiguobacterium sp. AT1b]
gi|259535188|sp|C4KZU9|PTH_EXISA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|229468840|gb|ACQ70612.1| peptidyl-tRNA hydrolase [Exiguobacterium sp. AT1b]
Length = 185
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 112/186 (60%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG ++ RHN+GF+ IDR+ H + KF+A + G+++G R +L+K
Sbjct: 1 MKCIVGLGNPGKKFEMTRHNVGFLAIDRLAEKHGISLNEAKFNALMGTGRINGERVVLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ ++++YK+ +++ LVI+DDLD+ G LR + G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGEAVRPILDYYKI-EIDDLLVIYDDLDMVPGKLRFRPKGSAGGHNGIKSLIQ 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +KRL++GIGRPP ++ VL N+ E L +DN + + ++
Sbjct: 120 HLGTAEFKRLKLGIGRPPHPIKVVDWVLMNYRKDELPELNETLDNAVTAATDFVDTDWLA 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 LMNRYN 185
>gi|114769271|ref|ZP_01446897.1| peptidyl-tRNA hydrolase [alpha proteobacterium HTCC2255]
gi|114550188|gb|EAU53069.1| peptidyl-tRNA hydrolase [alpha proteobacterium HTCC2255]
Length = 225
Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats.
Identities = 80/185 (43%), Positives = 119/185 (64%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +++I + H F WK KF +I++G+L + IL+K
Sbjct: 1 MKLFVGLGNPGKKYTNNRHNIGFMALNQIANDHSFSPWKNKFQGQITDGKLGDEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E + FYK+ +E+ +V HD+LDL LR+K GG AGHNGL+SI +
Sbjct: 61 PETFMNLSGQSVSETIKFYKIK-IEDIIVFHDELDLATAKLRVKISGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+GIG P + +VL +F+ ++ +L ++ I+ LA + F
Sbjct: 120 HIGADYHRVRMGIGHPGHKDRVANYVLSDFAKNDQNWLQDLLFGISDGAIYLANNDAGKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|217977795|ref|YP_002361942.1| peptidyl-tRNA hydrolase [Methylocella silvestris BL2]
gi|254783878|sp|B8EK40|PTH_METSB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|217503171|gb|ACK50580.1| Aminoacyl-tRNA hydrolase [Methylocella silvestris BL2]
Length = 196
Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats.
Identities = 86/185 (46%), Positives = 122/185 (65%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NRHNIGFM +D+I + P ++ KF+ ISE L G R +L+
Sbjct: 1 MILLVGLGNPGKAYAGNRHNIGFMALDQIARDYSAPPFRSKFNGLISEITLAGERCVLLA 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ E + K+ ++ +V+HD+LDL G +R+KTGGG+AGHNGLKSI+
Sbjct: 61 PQTYMNDSGRSVGEAARYLKIEP-KDIVVLHDELDLPAGKVRVKTGGGNAGHNGLKSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y+R+R+GIG P D A + +VLG+F+ E ++ + +A S PLLAK ED +F
Sbjct: 120 HIGNEYRRVRLGIGHPGDRALVHNYVLGDFAKSEAAWVEALCKAVAASAPLLAKGEDDAF 179
Query: 181 LNHIV 185
I
Sbjct: 180 QTKIF 184
>gi|325662343|ref|ZP_08150952.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 4_1_37FAA]
gi|325471345|gb|EGC74568.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 4_1_37FAA]
Length = 192
Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 110/186 (59%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNP +Y RHN+GF IDR+ + KK A I +G +DG + IL+K
Sbjct: 1 MYIIIGLGNPTAQYEGTRHNVGFDVIDRLGEKYNIAVDTKKHKAYIGKGMIDGQKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E++++YK+ E LVI+DD+ LD G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESVRELVDYYKVDAEEEVLVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+++G+G P + +VLG+FS ER + D ++ L+ E +
Sbjct: 121 HLGTQVFPRIKVGVGEKPKNYDLADYVLGHFSKAERAQMEEGYDRATEAVRLILAGEIDA 180
Query: 180 FLNHIV 185
+N
Sbjct: 181 AMNQYN 186
>gi|253681331|ref|ZP_04862129.1| aminoacyl-tRNA hydrolase [Clostridium botulinum D str. 1873]
gi|253562569|gb|EES92020.1| aminoacyl-tRNA hydrolase [Clostridium botulinum D str. 1873]
Length = 190
Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 112/189 (59%), Gaps = 3/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG EY RHN+GF ID + H +KKF +G + G + IL+K
Sbjct: 1 MFLIVGLGNPGKEYEHTRHNVGFDVIDLLAEKHNIELNRKKFKGMYGDGNIAGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ E+M+FYK+ N E+ +VI+DD+ L+ G +R++ G GHNG+K+I
Sbjct: 61 PLTYMNLSGESVREIMDFYKITN-EDIIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+++G+G+P +++ HVLG F + L + +++ ++ ++
Sbjct: 120 HLNNDYFSRVKVGVGQP-VKTNLVSHVLGKFEKEDECKLNKTFEAACKAVQIIIEKGTAE 178
Query: 180 FLNHIVSVR 188
+N +
Sbjct: 179 AMNKFNGFK 187
>gi|114767699|ref|ZP_01446392.1| peptidyl-tRNA hydrolase [Pelagibaca bermudensis HTCC2601]
gi|114540295|gb|EAU43394.1| peptidyl-tRNA hydrolase [Roseovarius sp. HTCC2601]
Length = 241
Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats.
Identities = 84/183 (45%), Positives = 115/183 (62%), Gaps = 1/183 (0%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
I GLGNPG +Y NRHNIGFM +DRI H F W+ +F AE+SEG+L G + +L+KP
Sbjct: 7 IFVGLGNPGGKYARNRHNIGFMALDRIAEDHGFGPWRARFQAEVSEGRLGGDKVLLLKPG 66
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSGQ++ E M F+KL ++ V HD+LDL G R+KTGGG AGHNGL+SI
Sbjct: 67 TFMNLSGQAVGEAMRFFKLEP-DDVTVFHDELDLAPGKCRVKTGGGHAGHNGLRSIHAHI 125
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
G+ Y R+R+GIG P + +VL +F + +L ++ I+ LA+ + F N
Sbjct: 126 GETYHRVRLGIGHPGRKDLVAAYVLHDFHKADEDWLDDLLRGISDGAGELARGDTGKFQN 185
Query: 183 HIV 185
+
Sbjct: 186 AVA 188
>gi|126735031|ref|ZP_01750777.1| Aminoacyl-tRNA hydrolase [Roseobacter sp. CCS2]
gi|126715586|gb|EBA12451.1| Aminoacyl-tRNA hydrolase [Roseobacter sp. CCS2]
Length = 224
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 79/185 (42%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +NRHNIG+M +DRI + H F W+ KF + +G+ R L+K
Sbjct: 1 MKLLVGLGNPGAKYAQNRHNIGYMALDRIAADHGFSGWRSKFQGQTCDGRFGSERVTLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M + KL + ++ +V HD++DL G +RLKTGGG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVGEAMRYLKLAS-DDIIVFHDEIDLAPGKVRLKTGGGHAGHNGLRSIHG 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F + +L + I+ + L + F
Sbjct: 120 HIGPDYDRVRMGVGHPGHKDAVPGYVLRDFPKADAEWLDDALRGISDGIADLIAGDGGKF 179
Query: 181 LNHIV 185
LN I
Sbjct: 180 LNAIA 184
>gi|293395768|ref|ZP_06640050.1| aminoacyl-tRNA hydrolase [Serratia odorifera DSM 4582]
gi|291421705|gb|EFE94952.1| aminoacyl-tRNA hydrolase [Serratia odorifera DSM 4582]
Length = 196
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H P + KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLAQRHNQPLKEESKFFGYTARLNLAGHDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ + LV HD+LDL G +LK GG + GHNGLK I
Sbjct: 65 PTTFMNLSGKAVAAMATFYRI-QADEILVAHDELDLPPGVAKLKLGGSNGGHNGLKDIQS 123
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K N+ RLRIGIG P D ++ VLG + E+ + ID R LL K
Sbjct: 124 KMANNPNFYRLRIGIGHPGDRNKVVGFVLGKPPASEQTLIDDAIDESLRCTELLLKEGMT 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 KAMNRLHAFK 193
>gi|255023010|ref|ZP_05294996.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL J1-208]
Length = 186
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEINIGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ AK +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVIHYVLGDFPKAEQPEIIAAIQKSADAIEDFAKTPFIE 178
Query: 180 FLNHIVS 186
+N
Sbjct: 179 VMNKYNQ 185
>gi|169825683|ref|YP_001695841.1| peptidyl-tRNA hydrolase [Lysinibacillus sphaericus C3-41]
gi|168990171|gb|ACA37711.1| Peptidyl-tRNA hydrolase [Lysinibacillus sphaericus C3-41]
Length = 203
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+ GLGNPG Y RHNIGF ID + P KF+ + + +L+K
Sbjct: 18 MKIIVGLGNPGKPYEHTRHNIGFDVIDALAEKWGTPLTNSKFNGMYTTVHRPEGKVLLVK 77
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M+++ + ++E+ +VI+DDLDL+ G LRL+ G GHNG+KS+ +
Sbjct: 78 PLTYMNLSGECVGPLMDYFDI-DVEDLIVIYDDLDLETGKLRLRQKGSAGGHNGIKSLIQ 136
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GI RPP + +VLG FS ++ + I+ ++ + + +
Sbjct: 137 HLGTQEFNRIRVGISRPPAGMKVADYVLGKFSKEDQVSMNEAIEKSVNAVEVSLSKPFLD 196
Query: 180 FLNHIV 185
+NH
Sbjct: 197 VMNHFN 202
>gi|239629011|ref|ZP_04672042.1| aminoacyl-tRNA hydrolase [Clostridiales bacterium 1_7_47_FAA]
gi|239519157|gb|EEQ59023.1| aminoacyl-tRNA hydrolase [Clostridiales bacterium 1_7_47FAA]
Length = 216
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 107/189 (56%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+IVAGLGNP EY + RHN+GF ID + +KKF G + G + +L+K
Sbjct: 28 MYIVAGLGNPTREYEKTRHNVGFEVIDVLADMLGTTVEEKKFKGCYGRGIIGGEKVLLLK 87
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ +FYK+ + E+ ++I+DD+ LD G LR++ G GHNG+K+I
Sbjct: 88 PQTFMNLSGESIRAAADFYKV-DPEHIIIIYDDISLDVGQLRIRKKGSAGGHNGIKNIIA 146
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G P + +VL FS +R + A+++ ++ +
Sbjct: 147 HLGTQEFPRIKVGVGDKPKKMDLADYVLSRFSKEDRAAMEDAFKTAAKAVEVMITDGMDT 206
Query: 180 FLNHIVSVR 188
+N +
Sbjct: 207 AMNQFNGHK 215
>gi|126731996|ref|ZP_01747799.1| peptidyl-tRNA hydrolase [Sagittula stellata E-37]
gi|126707528|gb|EBA06591.1| peptidyl-tRNA hydrolase [Sagittula stellata E-37]
Length = 228
Score = 254 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 86/185 (46%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I GLGNPG +Y NRHNIGFM +DRI H F WK KF +++EG+L G + IL+K
Sbjct: 1 MQIFVGLGNPGAKYAANRHNIGFMAMDRIAGDHGFGPWKAKFQGQVAEGRLGGDKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M FYKL + V HD+LDL G R+K GG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVGEAMRFYKLEPG-DVTVFHDELDLAPGKCRVKMAGGHAGHNGLRSIHG 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y+R+R+GIG P + +VL +F ++ +L ++ I+ P LA + F
Sbjct: 120 HIGEAYRRVRLGIGHPGRKELVAAYVLHDFHKADQDWLDDLLRGISDGAPHLADGDAGKF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNAVA 184
>gi|146342828|ref|YP_001207876.1| peptidyl-tRNA hydrolase [Bradyrhizobium sp. ORS278]
gi|166199310|sp|A4Z0I5|PTH_BRASO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146195634|emb|CAL79661.1| peptidyl-tRNA hydrolase [Bradyrhizobium sp. ORS278]
Length = 201
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F W+++F E SEG LD R IL+K
Sbjct: 1 MLLFVGLGNPGAKYSRNRHNIGFMAVDEISRRHRFSPWRRRFQGETSEGTLDSERVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E +F+KL + + V D+L+L G LR+K GGG AGHNGL+SIS
Sbjct: 61 PTTYMNESGRAVQEAASFFKL-GVGDVTVFQDELELAPGKLRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+R+GIG P + HVL +F+ E ++ + + +A + LL + D +F
Sbjct: 120 HLGNDYRRVRLGIGHPGVKELVHGHVLSDFAKSEMPWVEALCEAVADNAELLTGKRDSTF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 ANKVH 184
>gi|32476152|ref|NP_869146.1| peptidyl-tRNA hydrolase [Rhodopirellula baltica SH 1]
gi|46576732|sp|Q7UKV0|PTH_RHOBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|32446696|emb|CAD76532.1| peptidyl-tRNA hydrolase [Rhodopirellula baltica SH 1]
Length = 190
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 101/188 (53%), Gaps = 2/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHNIGFM D + + KF EISE +++ + +++
Sbjct: 1 MKLVVGLGNPGRKYDQTRHNIGFMVADALVRRYVGSPPTTKFEGEISECRIENEKVLVLC 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS+ + M+FYKL + E+ LVI DDL+L+ G +RL+ G G GL I
Sbjct: 61 PQTYMNASGQSVRKAMDFYKL-SPEDILVICDDLNLETGRVRLRRSGSAGGQKGLVDIIR 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGIGRPP + +VLG F E + I + +
Sbjct: 120 HLGSEQWARLKIGIGRPPAKWQVSDYVLGKFDKTELEEMEHAIVHSCDATACWVADGVTE 179
Query: 180 FLNHIVSV 187
+N +
Sbjct: 180 AMNRYNAA 187
>gi|255281408|ref|ZP_05345963.1| aminoacyl-tRNA hydrolase [Bryantella formatexigens DSM 14469]
gi|255267896|gb|EET61101.1| aminoacyl-tRNA hydrolase [Bryantella formatexigens DSM 14469]
Length = 191
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 101/186 (54%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG +Y RHN+GF ID + + +K A G+++G +L+K
Sbjct: 1 MYIIAGLGNPGRQYAHTRHNVGFDTIDVLAEKYNIKVEYEKGRALTGSGRIEGQSVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + +FYK+ +VI+DD+ L G LR++ G GHNG+KSI
Sbjct: 61 PLTFMNLSGESIRALADFYKIDGTSQLIVIYDDISLPPGQLRIREKGSAGGHNGIKSIIS 120
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+ + R+++G+G P + +VL FS ER + + A + L +
Sbjct: 121 HLGGQEFLRIKVGVGEKPAGWDLADYVLSRFSQEERQKVEEALKRAADAAVCLMTDGVEA 180
Query: 180 FLNHIV 185
+N
Sbjct: 181 AMNEYN 186
>gi|315274584|ref|ZP_07869460.1| peptidyl-tRNA hydrolase [Listeria marthii FSL S4-120]
gi|313615786|gb|EFR89038.1| peptidyl-tRNA hydrolase [Listeria marthii FSL S4-120]
Length = 186
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEINVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPI-KGEVINYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLNHIVS 186
+N
Sbjct: 179 VMNKYNQ 185
>gi|329890237|ref|ZP_08268580.1| peptidyl-tRNA hydrolase [Brevundimonas diminuta ATCC 11568]
gi|328845538|gb|EGF95102.1| peptidyl-tRNA hydrolase [Brevundimonas diminuta ATCC 11568]
Length = 201
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 72/187 (38%), Positives = 118/187 (63%), Gaps = 1/187 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y +NRHNIGFM +D I F + KF + +++G+++G + +L+K
Sbjct: 1 MIIIAGLGNPGPKYEKNRHNIGFMAVDEIADRWRFGPSRAKFQSIVADGEVEGTKVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ E FYK+ E+ +V HD++DL G R+K GGG AG NG++S+
Sbjct: 61 PQTYMNESGRAVGEAARFYKVKP-EHVIVFHDEIDLAPGRFRMKKGGGAAGQNGIRSLIS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++R R+GIG P + + HVLG+F ++ +L ++ A +LP +D +
Sbjct: 120 HLGADFRRARMGIGHPGEPQLVHAHVLGDFHKADKPWLDAMLQACADALPFAVNGDDERY 179
Query: 181 LNHIVSV 187
++ +
Sbjct: 180 QGEVMRL 186
>gi|170750518|ref|YP_001756778.1| aminoacyl-tRNA hydrolase [Methylobacterium radiotolerans JCM 2831]
gi|238688884|sp|B1M1C0|PTH_METRJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|170657040|gb|ACB26095.1| Aminoacyl-tRNA hydrolase [Methylobacterium radiotolerans JCM 2831]
Length = 202
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 83/185 (44%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NRHNIGF+ +D I H ++ +F E +E L R IL+K
Sbjct: 1 MRLIVGLGNPGARYAGNRHNIGFLAVDAIARQHRASPFRHRFQGEAAEVVLGTERAILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E FYK+P L + +V+HD+LDL LR+K GGG+AGHNGL+SI+
Sbjct: 61 PSTFMNESGRAVSEAQRFYKIP-LADVIVLHDELDLAPAKLRVKRGGGNAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+CG +Y+R+R+GIG P D A + +VL +F E ++ + +A LLA ED SF
Sbjct: 120 QCGNDYRRVRLGIGHPGDKALVHAYVLNDFGKAELPWVEDLCRAVADHAALLAAGEDASF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNKVH 184
>gi|188588535|ref|YP_001919597.1| peptidyl-tRNA hydrolase [Clostridium botulinum E3 str. Alaska E43]
gi|238689626|sp|B2UXS9|PTH_CLOBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|188498816|gb|ACD51952.1| peptidyl-tRNA hydrolase [Clostridium botulinum E3 str. Alaska E43]
Length = 191
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 76/189 (40%), Positives = 114/189 (60%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHNIGF ID I + + ++KF EG + + IL+K
Sbjct: 1 MFLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFKGVYGEGFIANNKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG S+ EV NFYK+ N EN +VI+DD+ LD G LR++ G GHNG+KSI
Sbjct: 61 PTTYMNLSGDSVREVANFYKISN-ENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+++G+G+P D +++ +VLG FS E+ L I+ S+ + K++ S
Sbjct: 120 NLSTDVFPRIKVGVGQPND--NLVDYVLGKFSKEEKEVLKESIEAATNSVEEIIKQDINS 177
Query: 180 FLNHIVSVR 188
+N +
Sbjct: 178 AMNKFNGFK 186
>gi|326403866|ref|YP_004283948.1| peptidyl-tRNA hydrolase [Acidiphilium multivorum AIU301]
gi|325050728|dbj|BAJ81066.1| peptidyl-tRNA hydrolase [Acidiphilium multivorum AIU301]
Length = 192
Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats.
Identities = 80/190 (42%), Positives = 116/190 (61%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP NRHNIGFM ID I H F W+K+F +SEG + G + + +K
Sbjct: 1 MKLWVGLGNPEPGMARNRHNIGFMAIDVIADRHGFAPWRKRFSGLVSEGSIGGEKIVALK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ F+KLP + V HD+LDL G +R+K GGG AGHNGL+SI
Sbjct: 61 PLTYMNESGRAVQPASAFFKLPP-DAVTVFHDELDLIPGKVRVKRGGGAAGHNGLRSIDR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++Y R+R+GIG P D A + HVLGNF+ + +L+ ++ ++ + PLLA +
Sbjct: 120 TLGTQDYWRVRLGIGHPGDKARVHGHVLGNFAKTDEDWLVDTLEAVSDAAPLLAAGKPED 179
Query: 180 FLNHIVSVRK 189
F+ + + K
Sbjct: 180 FMTKVALLTK 189
>gi|331086146|ref|ZP_08335228.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330406305|gb|EGG85819.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 192
Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats.
Identities = 71/186 (38%), Positives = 109/186 (58%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNP +Y RHN+GF IDR+ + KK A I +G +DG + +L+K
Sbjct: 1 MYIIIGLGNPTAQYEGTRHNVGFDVIDRLGEKYNIAVDTKKHKAYIGKGMIDGQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E++ +YK+ E LVI+DD+ LD G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESVRELVEYYKVDAEEEVLVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+++G+G P + +VLG+FS ER + D ++ L+ E +
Sbjct: 121 HLGTQVFPRIKVGVGEKPKNYDLADYVLGHFSKAERAQMEDGYDRATEAVRLILAGEIDA 180
Query: 180 FLNHIV 185
+N
Sbjct: 181 AMNQYN 186
>gi|296329555|ref|ZP_06872041.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672752|ref|YP_003864423.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153298|gb|EFG94161.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305410995|gb|ADM36113.1| peptidyl-tRNA hydrolase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 188
Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 108/187 (57%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y RHN+GFM ID++ + KF+ G + G + +L+K
Sbjct: 1 MLVIAGLGNPGKNYENTRHNVGFMVIDQLAKEWNIELNQNKFNGLYGTGFVSGKKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ L +M++Y + N + VI+DDLDL G +RL+T G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECLRPLMDYYDVDNG-DLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQ 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+RIGIGRP + ++ +VLG+F+ E + ID ++ + +
Sbjct: 120 HLGTSEFDRIRIGIGRPVNGMKVVDYVLGSFNKEEVPDIDGAIDKSVKACEASLSKPFLE 179
Query: 180 FLNHIVS 186
+N +
Sbjct: 180 VMNEFNA 186
>gi|86751267|ref|YP_487763.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris HaA2]
gi|119390991|sp|Q2ISF8|PTH_RHOP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86574295|gb|ABD08852.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris HaA2]
Length = 207
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 83/185 (44%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +NRHNIGFM ID I H F W+++F E S+G LDG R L+K
Sbjct: 1 MRLFVGLGNPGTKYQDNRHNIGFMVIDEIARRHGFSPWRRRFQGETSDGALDGERITLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E +FYK+ E V HD+++L +R+K GGG AGHNGL+SIS
Sbjct: 61 PLTYMNESGRAVQEAASFYKIGQGE-VAVFHDEIELPPAKVRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + HVLG+F+ ER ++ + + A + L+AK +D SF
Sbjct: 120 HIGNDYLRVRLGVGHPGVKEMVHGHVLGDFAKSERPWVAALCEIAADNAGLIAKGKDASF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 ANKVH 184
>gi|194017971|ref|ZP_03056578.1| peptidyl-tRNA hydrolase [Bacillus pumilus ATCC 7061]
gi|194010308|gb|EDW19883.1| peptidyl-tRNA hydrolase [Bacillus pumilus ATCC 7061]
Length = 188
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 71/186 (38%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M GLGNPG EY + RHN+GFM ID + P + KF+ G + G + +L+K
Sbjct: 1 MLAFIGLGNPGKEYEKTRHNVGFMTIDELSKKWDIPLNQSKFNGLFGTGFVSGQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M++Y +P LE+ VI+DDLDL G +RL+T G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECVRPLMDYYDIP-LEHLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSLIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R RIGIGRP + ++ +VLG FS E+ + I + + +
Sbjct: 120 HLGSPEFDRFRIGIGRPQNGMKVVDYVLGRFSEEEQPDIASAIQASVEACEAALTKPFLE 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 VMNDFN 185
>gi|78043715|ref|YP_359068.1| peptidyl-tRNA hydrolase [Carboxydothermus hydrogenoformans Z-2901]
gi|85681884|sp|Q9F8Q3|PTH_CARHZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|77995830|gb|ABB14729.1| peptidyl-tRNA hydrolase [Carboxydothermus hydrogenoformans Z-2901]
Length = 187
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNPG EY RHN GFM +D + H K+KF + + EG++ G++ +L+K
Sbjct: 1 MFIIAGLGNPGQEYENTRHNAGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG ++ E ++FYKLP L +V++DDLDL G +RL+ G GH G+ SI
Sbjct: 61 PQTYMNLSGTAVQEAVSFYKLP-LSRLVVVYDDLDLPLGKIRLRLKGSAGGHRGMGSIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGIGRP + +VL F+ ER L P + A ++ +
Sbjct: 120 CLGSEEIPRLKIGIGRPAV-GDVKDYVLQPFTGAEREILEPTLKLAAEAITVALTEGFNK 178
Query: 180 FLNHIV 185
+
Sbjct: 179 AMTDFN 184
>gi|251779900|ref|ZP_04822820.1| aminoacyl-tRNA hydrolase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243084215|gb|EES50105.1| aminoacyl-tRNA hydrolase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 191
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 76/189 (40%), Positives = 114/189 (60%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHNIGF ID I + + ++KF EG + + IL+K
Sbjct: 1 MFLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFKGVYGEGFIANNKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG S+ EV NFYK+ N EN +VI+DD+ LD G LR++ G GHNG+KSI
Sbjct: 61 PTTYMNLSGDSVREVANFYKISN-ENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+++G+G+P D +++ +VLG FS E+ L I+ S+ + K++ S
Sbjct: 120 NLSTDVFPRIKVGVGQPND--NLVDYVLGKFSKEEKEVLKESIEAATNSVEEIIKQDVNS 177
Query: 180 FLNHIVSVR 188
+N +
Sbjct: 178 AMNKFNGFK 186
>gi|296271107|ref|YP_003653739.1| peptidyl-tRNA hydrolase [Thermobispora bispora DSM 43833]
gi|296093894|gb|ADG89846.1| peptidyl-tRNA hydrolase [Thermobispora bispora DSM 43833]
Length = 209
Score = 253 bits (648), Expect = 6e-66, Method: Composition-based stats.
Identities = 79/185 (42%), Positives = 112/185 (60%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY NRHN GFM D + + K A+++EG+L G+ +L KP
Sbjct: 15 WLIVGLGNPGPEYAMNRHNAGFMVADELANRIGGRFTVHKTRAQVAEGRLSGVPVVLAKP 74
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
++MNLSG + + ++YK+ EN +VIHD+LD+ FG LR KTGGGD GHNGLKSI++
Sbjct: 75 LSYMNLSGGPVKALADYYKIGP-ENIVVIHDELDIPFGALRAKTGGGDNGHNGLKSITKA 133
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y R+R GIGRPP +VL +F++ ER L +ID A + L +
Sbjct: 134 LGTRDYSRIRFGIGRPPGRMDPATYVLRDFATAERKDLPFLIDRAADMVESLLTEGLAAT 193
Query: 181 LNHIV 185
N
Sbjct: 194 QNKFH 198
>gi|313625454|gb|EFR95203.1| peptidyl-tRNA hydrolase [Listeria innocua FSL J1-023]
Length = 184
Score = 253 bits (648), Expect = 7e-66, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ +SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMVSEINVGGEKIILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y + +E+ L+++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNI-QIEDVLIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVIHYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 VMNKYN 184
>gi|295093546|emb|CBK82637.1| peptidyl-tRNA hydrolase [Coprococcus sp. ART55/1]
Length = 185
Score = 253 bits (648), Expect = 7e-66, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+ GLGNPG +Y RHN+GF +D + H K A I +G +DG + IL
Sbjct: 1 MKIIVGLGNPGAKYAGTRHNVGFAVLDELAERHNIRIDTAKHKALIGKGIIDGEKVILAM 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ +M+FYK +E+ +V++DD+DLD G LR++ G GHNG+K+I +
Sbjct: 61 PQTFMNLSGESVRAIMDFYKC-TVEDLIVVYDDIDLDVGKLRIRQKGSAGGHNGMKNIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+G+G+ PD + +VL F + + N ++ + V+
Sbjct: 120 HVGSQEFVRIRVGVGKKPDHMDLADYVLSRFGKEDLANIRESCGNACDAVETILADGTVA 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNKFN 185
>gi|266619806|ref|ZP_06112741.1| aminoacyl-tRNA hydrolase [Clostridium hathewayi DSM 13479]
gi|288868592|gb|EFD00891.1| aminoacyl-tRNA hydrolase [Clostridium hathewayi DSM 13479]
Length = 192
Score = 253 bits (648), Expect = 7e-66, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 108/190 (56%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNP EY + RHN+GF ID + +KK A +G + G + IL K
Sbjct: 1 MYLIAGLGNPTREYEKTRHNVGFEAIDILADKAGTTVTEKKHKALYGKGYIGGQKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E+ +FYK+ EN +++ DD++L G LR++ G GHNGLK+I
Sbjct: 61 PQTYMNLSGESIREIADFYKIEP-ENIIILCDDINLSEGQLRIRLKGSAGGHNGLKNIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+RIG+G P + +VLG F ++ + + A + ++ + +
Sbjct: 120 HLGTQEFPRIRIGVGEKPRGMDLADYVLGRFPKEQQAVMEEAYRDAADAACMMIEEGADA 179
Query: 180 FLNHIVSVRK 189
+NH K
Sbjct: 180 AMNHYNRKHK 189
>gi|84515240|ref|ZP_01002602.1| peptidyl-tRNA hydrolase [Loktanella vestfoldensis SKA53]
gi|84510523|gb|EAQ06978.1| peptidyl-tRNA hydrolase [Loktanella vestfoldensis SKA53]
Length = 221
Score = 253 bits (648), Expect = 7e-66, Method: Composition-based stats.
Identities = 82/185 (44%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +NRHNIGFM +DRI H F W+ KF +ISEG++ + L+K
Sbjct: 1 MKLLIGLGNPGAKYAQNRHNIGFMAMDRIAGDHGFSPWRAKFQGQISEGRIGPDKVALLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSGQS+ E M + KL + +V HD++DL G +RLKTGGG AGHNGL+SI
Sbjct: 61 PETFMNLSGQSVGEAMRYLKLTPA-DLIVFHDEIDLAPGKVRLKTGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F+ + +L + I+ + L + F
Sbjct: 120 HIGPDYDRVRLGVGHPGHKDAVPGYVLHDFAKADLDWLDDEMRGISDGIAHLVTGDGARF 179
Query: 181 LNHIV 185
LN I
Sbjct: 180 LNAIA 184
>gi|126653273|ref|ZP_01725384.1| peptidyl-tRNA hydrolase [Bacillus sp. B14905]
gi|126589947|gb|EAZ84076.1| peptidyl-tRNA hydrolase [Bacillus sp. B14905]
Length = 186
Score = 253 bits (648), Expect = 8e-66, Method: Composition-based stats.
Identities = 64/186 (34%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+ GLGNPG Y RHNIGF ID + P KF+ + + +L+K
Sbjct: 1 MKIIVGLGNPGKPYEHTRHNIGFDVIDALAEKWGAPLTNSKFNGMYTTVHRPEGKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M+++ + ++E+ +VI+DDLDL+ G LRL+ G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECVGPLMDYFDI-DVEDLIVIYDDLDLETGKLRLRQKGSAGGHNGIKSLIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GI RPP + +VL FS ++ ++ I+ ++ + + +
Sbjct: 120 HLGTQEFNRIRVGISRPPAGMKVADYVLAKFSKEDQVYMKEAIEKSVNAVEVSLSKPFLD 179
Query: 180 FLNHIV 185
+NH
Sbjct: 180 VMNHFN 185
>gi|148260672|ref|YP_001234799.1| peptidyl-tRNA hydrolase [Acidiphilium cryptum JF-5]
gi|166199297|sp|A5FZ48|PTH_ACICJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146402353|gb|ABQ30880.1| peptidyl-tRNA hydrolase [Acidiphilium cryptum JF-5]
Length = 192
Score = 253 bits (648), Expect = 8e-66, Method: Composition-based stats.
Identities = 80/190 (42%), Positives = 116/190 (61%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP NRHNIGFM ID I H F W+K+F +SEG + G + + +K
Sbjct: 1 MKLWVGLGNPEPGMARNRHNIGFMAIDVIADRHGFAPWRKRFSGLVSEGSVGGEKIVALK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ F+KLP + V HD+LDL G +R+K GGG AGHNGL+SI
Sbjct: 61 PLTYMNESGRAVQPASAFFKLPP-DAVTVFHDELDLIPGKVRVKRGGGAAGHNGLRSIDR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++Y R+R+GIG P D A + HVLGNF+ + +L+ ++ ++ + PLLA +
Sbjct: 120 TLGTQDYWRVRLGIGHPGDKARVHGHVLGNFAKTDEDWLVDTLEAVSDAAPLLAAGKPED 179
Query: 180 FLNHIVSVRK 189
F+ + + K
Sbjct: 180 FMTKVALLTK 189
>gi|289433568|ref|YP_003463440.1| Peptidyl-tRNA hydrolase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289169812|emb|CBH26350.1| pth [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 184
Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 112/186 (60%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ +SE ++G + +L+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMVSEININGEKMLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + +M++Y +P +E+ L+++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGVCIRPLMDYYNIP-IEDVLIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVNRPSH-GEVINYVLGDFPKAEQPDIIEAIQKSADAIEDFARTPFIE 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 IMNKYN 184
>gi|16802259|ref|NP_463744.1| peptidyl-tRNA hydrolase [Listeria monocytogenes EGD-e]
gi|47096206|ref|ZP_00233805.1| peptidyl-tRNA hydrolase [Listeria monocytogenes str. 1/2a F6854]
gi|224500336|ref|ZP_03668685.1| peptidyl-tRNA hydrolase [Listeria monocytogenes Finland 1988]
gi|224503467|ref|ZP_03671774.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL R2-561]
gi|254901002|ref|ZP_05260926.1| peptidyl-tRNA hydrolase [Listeria monocytogenes J0161]
gi|254913930|ref|ZP_05263942.1| peptidyl-tRNA hydrolase [Listeria monocytogenes J2818]
gi|254938279|ref|ZP_05269976.1| pth [Listeria monocytogenes F6900]
gi|255028170|ref|ZP_05300121.1| peptidyl-tRNA hydrolase [Listeria monocytogenes LO28]
gi|284803048|ref|YP_003414913.1| peptidyl-tRNA hydrolase [Listeria monocytogenes 08-5578]
gi|284996189|ref|YP_003417957.1| peptidyl-tRNA hydrolase [Listeria monocytogenes 08-5923]
gi|21263846|sp|Q8YAD1|PTH_LISMO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|16409578|emb|CAD00740.1| pth [Listeria monocytogenes EGD-e]
gi|47015454|gb|EAL06388.1| peptidyl-tRNA hydrolase [Listeria monocytogenes str. 1/2a F6854]
gi|258610890|gb|EEW23498.1| pth [Listeria monocytogenes F6900]
gi|284058610|gb|ADB69551.1| peptidyl-tRNA hydrolase [Listeria monocytogenes 08-5578]
gi|284061656|gb|ADB72595.1| peptidyl-tRNA hydrolase [Listeria monocytogenes 08-5923]
gi|293591948|gb|EFG00283.1| peptidyl-tRNA hydrolase [Listeria monocytogenes J2818]
Length = 186
Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVINYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLNHIVS 186
+N
Sbjct: 179 VMNKYNQ 185
>gi|86608210|ref|YP_476972.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|119391025|sp|Q2JNF7|PTH_SYNJB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86556752|gb|ABD01709.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 224
Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 109/185 (58%), Gaps = 3/185 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHN GFM +DR+ P +K+F EG G + L+KP
Sbjct: 16 LVVGLGNPGPQYANTRHNCGFMVVDRLAQRWGIPLVLEKRFQGSYGEGFALGGKRRLLKP 75
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+T+MN SGQS+ V+++YKL +L + LV++DD+DL G LRL+ G GHNG+KSI +
Sbjct: 76 ETYMNRSGQSVRAVLDWYKL-DLASVLVVYDDMDLPLGRLRLRGSGSAGGHNGMKSIIQH 134
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+G+G+P + ++ HVLG F+ E+ L ++D ++ + +
Sbjct: 135 LGSEAFPRLRLGVGKPKGSQDVVGHVLGGFAPAEQEVLERVLDVAVEAVECCWQEGLRTA 194
Query: 181 LNHIV 185
+N
Sbjct: 195 MNRFN 199
>gi|291550021|emb|CBL26283.1| peptidyl-tRNA hydrolase [Ruminococcus torques L2-14]
Length = 192
Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 112/190 (58%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNP EY RHN+GF IDR+ + +K A I +G + G + IL+K
Sbjct: 1 MYIIAGLGNPTKEYEGTRHNVGFDVIDRLSERYNIDVTMEKHRALIGKGMIAGQKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ V+++YK+ + +VI+DD+ L G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESIRSVIDYYKVDPEKELIVIYDDISLGVGQLRIRAKGSAGGHNGIKNIIA 120
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+ + R+++G+G P + +VLG+FS E+ + DN +++ L+ +
Sbjct: 121 HLGGQVFPRIKVGVGEKPPKYDLADYVLGHFSKAEQELMSEGYDNAVKAVELIVSDQISE 180
Query: 180 FLNHIVSVRK 189
+N +K
Sbjct: 181 AMNEYNRKKK 190
>gi|182420017|ref|ZP_02951251.1| peptidyl-tRNA hydrolase [Clostridium butyricum 5521]
gi|237669562|ref|ZP_04529542.1| aminoacyl-tRNA hydrolase [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182376054|gb|EDT73641.1| peptidyl-tRNA hydrolase [Clostridium butyricum 5521]
gi|237655006|gb|EEP52566.1| aminoacyl-tRNA hydrolase [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 191
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 72/189 (38%), Positives = 114/189 (60%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y + RHNIGF +D I + ++KF EG ++G + IL+K
Sbjct: 1 MFLIVGLGNPGSQYEDTRHNIGFKVVDNIAKEYNIEINRQKFKGVCGEGFINGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ EV++FYKL N ++ LVI+DD+ LD G LR++ G GHNG+KSI
Sbjct: 61 PTTYMNLSGESIREVVDFYKLSN-DDVLVIYDDISLDVGRLRIREKGSAGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G+P ++ +VLG F+ E L ID ++ + + +
Sbjct: 120 HLGTDIFPRIKVGVGQP--NVDLVNYVLGKFTKEEMEVLNESIDASTKAAKEIISNDVKT 177
Query: 180 FLNHIVSVR 188
+N +
Sbjct: 178 AMNIYNGFK 186
>gi|121602644|ref|YP_989278.1| peptidyl-tRNA hydrolase [Bartonella bacilliformis KC583]
gi|166199307|sp|A1UTH5|PTH_BARBK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|120614821|gb|ABM45422.1| peptidyl-tRNA hydrolase [Bartonella bacilliformis KC583]
Length = 193
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 91/189 (48%), Positives = 127/189 (67%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y NRHNIGFM +D IH F W KKF AE+S G ++G + +LIK
Sbjct: 1 MLLIAGLGNPGSHYQNNRHNIGFMAVDAIHEAFSFSPWSKKFQAEVSNGLINGEKILLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ E + FYKL +L++ +V +D+LDL GT+R+K GG GHNG+KSI
Sbjct: 61 PQTFMNLSGQAIGEALRFYKL-DLDHLIVFYDELDLPPGTVRVKIGGRSNGHNGIKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG NY +R+GIGRP + ++VLGNF+ ++ +L ++ IA ++ +L K + F
Sbjct: 120 HCGNNYHHVRLGIGRPISKELVDQYVLGNFTQSDQKWLSTLLGVIANNVAMLIKGDSNCF 179
Query: 181 LNHIVSVRK 189
+N I K
Sbjct: 180 MNKISLTMK 188
>gi|295401982|ref|ZP_06811944.1| peptidyl-tRNA hydrolase [Geobacillus thermoglucosidasius C56-YS93]
gi|312109200|ref|YP_003987516.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y4.1MC1]
gi|294975984|gb|EFG51600.1| peptidyl-tRNA hydrolase [Geobacillus thermoglucosidasius C56-YS93]
gi|311214301|gb|ADP72905.1| peptidyl-tRNA hydrolase [Geobacillus sp. Y4.1MC1]
Length = 187
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 104/186 (55%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ + GLGNPG EY + RHN+GFM ID + KF+ I+ + G + IL K
Sbjct: 2 LKLFVGLGNPGKEYEQTRHNVGFMVIDELAKRWNISFQTAKFNGMIASHIISGEKVILCK 61
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + ++++Y++ ++ + +VI+DDLDL G +RL+ G GHNG+KS+
Sbjct: 62 PLTYMNLSGECVRPLIDYYRI-DINDVVVIYDDLDLPVGKIRLRMKGSAGGHNGIKSLIH 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + +KR+RIGIGRP +I +VLG F E ++ I A + +
Sbjct: 121 HLGTQEFKRIRIGIGRPASGEKVIDYVLGRFHEEESGAIMEAILRSADACEKAVTEPFLQ 180
Query: 180 FLNHIV 185
+N
Sbjct: 181 VMNEFN 186
>gi|116871595|ref|YP_848376.1| peptidyl-tRNA hydrolase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123465946|sp|A0AF11|PTH_LISW6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116740473|emb|CAK19593.1| peptidyl-tRNA hydrolase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 184
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 111/186 (59%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ +SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMVSEINVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y + +E+ L+++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNI-QVEDVLIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ V
Sbjct: 120 HIKTQEFNRIRVGVSRPL-KGEVINYVLGDFPKAEQPDIIAAIQKSADAIEDFAQVPFVE 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 VMNKYN 184
>gi|150397464|ref|YP_001327931.1| peptidyl-tRNA hydrolase [Sinorhizobium medicae WSM419]
gi|150028979|gb|ABR61096.1| Aminoacyl-tRNA hydrolase [Sinorhizobium medicae WSM419]
Length = 248
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 95/185 (51%), Positives = 129/185 (69%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D I F +W KKF +EISEG++DG R +L+K
Sbjct: 10 MLIIAGLGNPGPKYAGNRHNIGFMAVDAIQGRQGFSSWSKKFKSEISEGEIDGERVLLMK 69
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG++L + M FYKL ++ +VI+D+LDL G R+KTGGG GHNG+KSI
Sbjct: 70 PQTFMNLSGEALGDAMRFYKLAP-KDIVVIYDELDLPAGKARIKTGGGHGGHNGIKSIDA 128
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG+ Y+RLR+GIG P + HVLG+F+ +R ++ P+++ IA + +L K ED
Sbjct: 129 HCGREYRRLRLGIGHPGAKDLVHAHVLGDFAKADRAWVSPLLEAIADNAGMLVKGEDSQL 188
Query: 181 LNHIV 185
+N I
Sbjct: 189 MNKIA 193
>gi|295108813|emb|CBL22766.1| peptidyl-tRNA hydrolase [Ruminococcus obeum A2-162]
Length = 192
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 62/186 (33%), Positives = 108/186 (58%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG +Y RHN+GF ID++ + P KF+A +G++ G IL+K
Sbjct: 1 MYLIVGLGNPGRQYEATRHNMGFDVIDKLVEEYQVPQAGVKFNAMYGKGRIGGQPVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P ++MNLSG + E+ N++K+ +V++DD+DLD G LR++ G GHNG+K I +
Sbjct: 61 PLSYMNLSGGPIREMANYFKIDPETEMIVVYDDIDLDPGQLRIRKKGSAGGHNGIKHIIQ 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +N+ R+++G+G P + +VLG F +R + + +++ L+ +
Sbjct: 121 QLGTQNFVRIKVGVGAKPKGWDLADYVLGRFDKEDRALIEEAQERACKAVELILTDSVDA 180
Query: 180 FLNHIV 185
+N
Sbjct: 181 AMNEYN 186
>gi|52078548|ref|YP_077339.1| peptidyl-tRNA hydrolase [Bacillus licheniformis ATCC 14580]
gi|52783910|ref|YP_089739.1| peptidyl-tRNA hydrolase [Bacillus licheniformis ATCC 14580]
gi|319648577|ref|ZP_08002791.1| peptidyl-tRNA hydrolase [Bacillus sp. BT1B_CT2]
gi|68052915|sp|Q65PG8|PTH_BACLD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|52001759|gb|AAU21701.1| peptidyl-tRNA hydrolase [Bacillus licheniformis ATCC 14580]
gi|52346412|gb|AAU39046.1| SpoVC [Bacillus licheniformis ATCC 14580]
gi|317389344|gb|EFV70157.1| peptidyl-tRNA hydrolase [Bacillus sp. BT1B_CT2]
Length = 188
Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 110/187 (58%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + AGLGNPG Y RHN+GFM ID + P K KF+ + G + G + +L+K
Sbjct: 1 MLVFAGLGNPGKTYENTRHNVGFMTIDELSKEWNIPLDKTKFNGQYGIGFVSGKKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ L ++++Y++P ++N VI+DDLDL G +RL+T G GHNG+KS +
Sbjct: 61 PLTYMNLSGECLRPLLDYYEIP-VDNLKVIYDDLDLPTGRIRLRTKGSAGGHNGIKSTIQ 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+RIGIGRP + ++ +VLG F+ E + + A++ ++ +
Sbjct: 120 HLGTSEFNRIRIGIGRPVNGMKVVDYVLGAFTDEEEPAIKEAVRQSAKACEASLEKPFLE 179
Query: 180 FLNHIVS 186
+N +
Sbjct: 180 VMNEFNA 186
>gi|86605936|ref|YP_474699.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-3-3Ab]
gi|119391024|sp|Q2JV16|PTH_SYNJA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86554478|gb|ABC99436.1| peptidyl-tRNA hydrolase [Synechococcus sp. JA-3-3Ab]
Length = 225
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 67/185 (36%), Positives = 104/185 (56%), Gaps = 3/185 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GFM +D++ P A +K+F EG G + L+KP
Sbjct: 16 LIVGLGNPGPQYANTRHNCGFMVVDQLAERWGIPLALEKRFQGSYGEGFALGGKRRLLKP 75
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+T+MN SG+++ V+++YKL LV++DD+DL G LRL+ G GHNG+KS+ E
Sbjct: 76 ETYMNRSGEAVRAVLDWYKLDPAS-VLVVYDDMDLPLGRLRLRGSGSAGGHNGMKSVIEH 134
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+G+GRP + HVLG+F E+ L ++ ++ + +
Sbjct: 135 LGSEAFPRLRLGVGRPKGNQDRVGHVLGSFEPAEQAVLDRVLRAAVAAVECCLQEGLKTA 194
Query: 181 LNHIV 185
+N
Sbjct: 195 MNRFN 199
>gi|254825873|ref|ZP_05230874.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL J1-194]
gi|293595112|gb|EFG02873.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL J1-194]
Length = 186
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFYGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVIHYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLNHIVS 186
+N
Sbjct: 179 VMNKYNQ 185
>gi|319789279|ref|YP_004150912.1| peptidyl-tRNA hydrolase [Thermovibrio ammonificans HB-1]
gi|317113781|gb|ADU96271.1| peptidyl-tRNA hydrolase [Thermovibrio ammonificans HB-1]
Length = 188
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 65/176 (36%), Positives = 101/176 (57%), Gaps = 2/176 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG EY + RHN+G+M +DR+ ++KF E + + + IL+KP
Sbjct: 3 KLVVGLGNPGREYEKTRHNVGWMVLDRLADKLGVSLNREKFKGLYGEYRGENGKVILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S+ + + ++K+ E +V++DDLDL G LRLK G GH G++SI +
Sbjct: 63 LTYMNRSGESVSQFLRYFKIAP-EEMVVVYDDLDLPLGKLRLKPKGSSGGHRGVESIIRE 121
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G N+ RL++GIGRP ++ +VL F + + +D + L LL E
Sbjct: 122 LGTSNFPRLKVGIGRPARKEEVVDYVLSPFGREQWPAIEEAVDRASDCLNLLISGE 177
>gi|295090935|emb|CBK77042.1| peptidyl-tRNA hydrolase [Clostridium cf. saccharolyticum K10]
gi|295116084|emb|CBL36931.1| peptidyl-tRNA hydrolase [butyrate-producing bacterium SM4/1]
Length = 199
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 64/186 (34%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG +Y RHN GF+ ID + + +K A I +G ++G + IL K
Sbjct: 1 MYIIAGLGNPGEKYDNTRHNAGFLTIDALADRYGIDVREKAHKALIGKGVIEGQKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ ++++YK+ E ++I DD+ L+ G LR++ G GHNG+KSI
Sbjct: 61 PQTYMNLSGESIRALVDYYKVTQ-EELVIIFDDISLEPGQLRIRKKGSAGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G P + +VLG F+ E+ + + A++ + +
Sbjct: 120 HLGTQEFTRIKVGVGEKPPRMDLADYVLGRFAKEEQDTMKEAFETAAKAAVAIMTEGADA 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNQYN 185
>gi|197302597|ref|ZP_03167652.1| hypothetical protein RUMLAC_01326 [Ruminococcus lactaris ATCC
29176]
gi|197298495|gb|EDY33040.1| hypothetical protein RUMLAC_01326 [Ruminococcus lactaris ATCC
29176]
Length = 192
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 110/190 (57%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNP EY RHN+GF IDR+ + KK A I +G + G + IL K
Sbjct: 1 MFIIAGLGNPTREYEGTRHNVGFDVIDRLAVRYNIDVDVKKHRALIGKGMIAGQKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ ++++YK+ +VI+DD+ LD G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESIRSILDYYKVDPETELIVIYDDISLDVGKLRIRAKGSAGGHNGIKNIIA 120
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+++G+G P + +VLG+FS E+ + ++ +++ ++ +
Sbjct: 121 HVGGPVFPRIKVGVGEKPPKYDLADYVLGHFSKAEQELMEEGYEDAVKAVEMIVSGDISG 180
Query: 180 FLNHIVSVRK 189
+N +K
Sbjct: 181 AMNEYNRKKK 190
>gi|16799322|ref|NP_469590.1| peptidyl-tRNA hydrolase [Listeria innocua Clip11262]
gi|21263851|sp|Q92F62|PTH_LISIN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|16412674|emb|CAC95478.1| pth [Listeria innocua Clip11262]
gi|313621016|gb|EFR92139.1| peptidyl-tRNA hydrolase [Listeria innocua FSL S4-378]
Length = 184
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ +SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMVSEINVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y + +E+ L+++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNI-QIEDVLIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVIHYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 VMNKYN 184
>gi|238926854|ref|ZP_04658614.1| aminoacyl-tRNA hydrolase [Selenomonas flueggei ATCC 43531]
gi|238885386|gb|EEQ49024.1| aminoacyl-tRNA hydrolase [Selenomonas flueggei ATCC 43531]
Length = 208
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 112/190 (58%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG EY +HN+GFM ID + AWK+ F + ++E ++ G + L+K
Sbjct: 1 MKLIAGLGNPGAEYANTKHNVGFMLIDALAEHLNVSAWKEDFSSSVAEARIGGEKIFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ ++++YKL + E+ +V+HDD+D+ GT+R++ G GHNG+KSI
Sbjct: 61 PLTYMNNSGEAIGPMLSYYKL-SSEDLIVVHDDMDIPVGTVRIRKKGSSGGHNGIKSILS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+RIGIGRPP +I HVL F+ + + I + ++ +
Sbjct: 120 HVGSEAFARVRIGIGRPPAGWTVINHVLAPFAPEDTPKIRETIAYLLPAVTCIVTDGTDF 179
Query: 180 FLNHIVSVRK 189
+N RK
Sbjct: 180 AMNRYNPHRK 189
>gi|46906445|ref|YP_012834.1| peptidyl-tRNA hydrolase [Listeria monocytogenes str. 4b F2365]
gi|47093155|ref|ZP_00230930.1| peptidyl-tRNA hydrolase [Listeria monocytogenes str. 4b H7858]
gi|226222842|ref|YP_002756949.1| peptidyl-tRNA hydrolase [Listeria monocytogenes Clip81459]
gi|254854443|ref|ZP_05243791.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL R2-503]
gi|254933053|ref|ZP_05266412.1| peptidyl-tRNA hydrolase [Listeria monocytogenes HPB2262]
gi|254992854|ref|ZP_05275044.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL J2-064]
gi|255520465|ref|ZP_05387702.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL J1-175]
gi|300766346|ref|ZP_07076305.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL N1-017]
gi|67460688|sp|Q724K0|PTH_LISMF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|259535204|sp|C1KYE6|PTH_LISMC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|46879709|gb|AAT03011.1| peptidyl-tRNA hydrolase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47018462|gb|EAL09220.1| peptidyl-tRNA hydrolase [Listeria monocytogenes str. 4b H7858]
gi|225875304|emb|CAS04001.1| Putative peptidyl-tRNA hydrolase [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|258607843|gb|EEW20451.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL R2-503]
gi|293584611|gb|EFF96643.1| peptidyl-tRNA hydrolase [Listeria monocytogenes HPB2262]
gi|300512945|gb|EFK40033.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL N1-017]
gi|328467969|gb|EGF38996.1| peptidyl-tRNA hydrolase [Listeria monocytogenes 1816]
Length = 186
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVIHYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLNHIVS 186
+N
Sbjct: 179 VMNKYNQ 185
>gi|90422927|ref|YP_531297.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris BisB18]
gi|119390992|sp|Q219F8|PTH_RHOPB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|90104941|gb|ABD86978.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris BisB18]
Length = 201
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 76/185 (41%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +D + H F W+++F E ++G + G R L+K
Sbjct: 1 MRLLVGLGNPGAKYQGNRHNIGFMVLDEMARRHGFSPWRRRFQGETADGSIGGERVTLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ + +F+KL + V+HD+++L LR+K GGG AGHNGL+SIS
Sbjct: 61 PLTYMNDSGRAVQDAASFFKLGLP-DITVVHDEIELPAAKLRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+RIG+G P + HVL +F+ ER ++ +I+ I LL D +F
Sbjct: 120 HVGNDYRRVRIGVGHPGAKELVHGHVLNDFAKSERPWVEAMIEAIVEHAGLLVDGRDSTF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNKVH 184
>gi|225575739|ref|ZP_03784349.1| hypothetical protein RUMHYD_03832 [Blautia hydrogenotrophica DSM
10507]
gi|225037036|gb|EEG47282.1| hypothetical protein RUMHYD_03832 [Blautia hydrogenotrophica DSM
10507]
Length = 194
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 63/186 (33%), Positives = 104/186 (55%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y RHNIGF +D + + P + +G + G + IL+K
Sbjct: 1 MYLIAGLGNPGRQYEHTRHNIGFDTVDVLVEEYQVPQSGVRCKGMYGKGMIAGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ + +++K+ +VI+DD+DL+ G +R++ G GHNG+K I
Sbjct: 61 PLTYMNLSGESVRGIADYFKIDPESQLIVIYDDIDLEPGQIRIRKKGSAGGHNGIKDIIA 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K G +N+ R++IG+G P + HVL FS ER + + A ++ + +
Sbjct: 121 KLGTQNFIRIKIGVGAKPRGWDLADHVLSRFSKEERELIDMAVSRAAAAVKKILTDGVDA 180
Query: 180 FLNHIV 185
+N
Sbjct: 181 AMNEYN 186
>gi|296532496|ref|ZP_06895213.1| aminoacyl-tRNA hydrolase [Roseomonas cervicalis ATCC 49957]
gi|296267180|gb|EFH13088.1| aminoacyl-tRNA hydrolase [Roseomonas cervicalis ATCC 49957]
Length = 190
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 78/190 (41%), Positives = 120/190 (63%), Gaps = 3/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP +RHNIGFM +D I H F W++++ ++EG +DG + +L+K
Sbjct: 1 MLLWVGLGNPEPGQARHRHNIGFMALDAIARRHGFTPWRQRYKGLVAEGSIDGRKLLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ F+K+P L + HD+LDL G +R+K GGG AGHNGL+ +
Sbjct: 61 PQTYMNLSGESVQPAAAFHKIP-LSDITAFHDELDLAPGKIRVKKGGGAAGHNGLRDMDR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y R+R+GIG P + HVLGNF+ + +L P++D +A + PLLA+ E +
Sbjct: 120 RLGAPDYWRVRLGIGHPGSKEKVTGHVLGNFAKVD-TWLEPMLDAVAEAAPLLARGETEA 178
Query: 180 FLNHIVSVRK 189
F+ + + +
Sbjct: 179 FMTRVALLTQ 188
>gi|316935874|ref|YP_004110856.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris DX-1]
gi|315603588|gb|ADU46123.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris DX-1]
Length = 203
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +NRHNIGFM ID I H F W+++F E ++G LDG+R L+K
Sbjct: 1 MRLFVGLGNPGTKYQDNRHNIGFMVIDEIARRHGFSPWRRRFQGETADGVLDGIRITLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E FYK+ E V HD+++L +R+K GGG AGHNGL+SIS
Sbjct: 61 PSTYMNDSGRAVQEAAGFYKIGQDE-IAVFHDEIELPPAKVRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + HVLG+F+ ER ++ + + A + L+A +D SF
Sbjct: 120 HVGNDYLRVRLGVGHPGAKELVHNHVLGDFAKSERPWVEALCEISADNAGLIANGKDASF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 ANKVH 184
>gi|253576882|ref|ZP_04854207.1| peptidyl-tRNA hydrolase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843749|gb|EES71772.1| peptidyl-tRNA hydrolase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 186
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 102/186 (54%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y + RHNIGFM +D + H + K A I EG L G + +LIK
Sbjct: 1 MKWIVGLGNPGAQYEKTRHNIGFMAVDELARRHGIEIKQSKCKALIGEGMLPGGKVVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ M++YK ++E+ +V++DDLD + G RL+ G GHNG+KSI +
Sbjct: 61 PMTYMNLSGEAVRAYMDYYK-ASIEDMIVVYDDLDTELGRNRLRYQGSAGGHNGIKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GI RP ++ +VL F ++ L I +L
Sbjct: 120 HIGTQTFNRIRMGISRPEPGYAVVDYVLSPFPKKDKPLLDQSIQAACDALEYSLDHTFEQ 179
Query: 180 FLNHIV 185
+
Sbjct: 180 TMAKFN 185
>gi|291087007|ref|ZP_06345123.2| aminoacyl-tRNA hydrolase [Clostridium sp. M62/1]
gi|291076615|gb|EFE13979.1| aminoacyl-tRNA hydrolase [Clostridium sp. M62/1]
Length = 202
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 64/186 (34%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG +Y RHN GF+ ID + + +K A I +G ++G + IL K
Sbjct: 4 MYIIAGLGNPGEKYDNTRHNAGFLTIDALADRYGIDVREKAHKALIGKGVIEGQKVILAK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ ++++YK+ E ++I DD+ L+ G LR++ G GHNG+KSI
Sbjct: 64 PQTYMNLSGESIRALVDYYKVTQ-EELVIIFDDISLEPGQLRIRKKGSAGGHNGIKSIIA 122
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G P + +VLG F+ E+ + + A++ + +
Sbjct: 123 HLGTQEFTRIKVGVGEKPPRMDLADYVLGRFAKEEQDTMKEAFETAAKAAVAIMTEGADA 182
Query: 180 FLNHIV 185
+N
Sbjct: 183 AMNQYN 188
>gi|304436451|ref|ZP_07396425.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370497|gb|EFM24148.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 208
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 112/190 (58%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG EY +HN+GFM ID + AWK+ F + ++E ++ G + L+K
Sbjct: 1 MKLIAGLGNPGAEYANTKHNVGFMLIDALAEHLNVSAWKEYFSSSVAEARIGGEKIFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ ++++YKL + E+ +V+HDD+D+ GT+R++ G GHNG+KSI
Sbjct: 61 PLTYMNNSGEAIGPMLSYYKL-SSEDLIVVHDDMDIPVGTVRIRKKGSSGGHNGIKSILS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+RIGIGRPP +I HVL F+ + + I + ++ +
Sbjct: 120 HVGSEAFARVRIGIGRPPAGWTVINHVLAPFAPEDTPKIREAIAYLLPAVTCIVTDGTDF 179
Query: 180 FLNHIVSVRK 189
+N RK
Sbjct: 180 AMNRYNPHRK 189
>gi|84500228|ref|ZP_00998494.1| peptidyl-tRNA hydrolase [Oceanicola batsensis HTCC2597]
gi|84392162|gb|EAQ04430.1| peptidyl-tRNA hydrolase [Oceanicola batsensis HTCC2597]
Length = 228
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 86/185 (46%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +DRI S H F W+ KF E++EG L G + +L+K
Sbjct: 1 MKLFVGLGNPGGKYAANRHNIGFMALDRIASDHGFAPWRTKFQGELAEGTLGGEKLLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E M FYKL + V HD+LDL G +R+K GGG AGHNGL+SI +
Sbjct: 61 PMTFMNLSGQSVGEAMRFYKLTPA-DVTVFHDELDLAPGKVRVKQGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+R+GIG P + +VL +F+ E+ L ++ ++ P LA + F
Sbjct: 120 HIGADYQRVRLGIGHPGHKDKVAPYVLADFAKAEQDGLDDLLRGLSDGAPELAGDDAGRF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|222086598|ref|YP_002545132.1| peptidyl-tRNA hydrolase [Agrobacterium radiobacter K84]
gi|254783845|sp|B9J795|PTH_AGRRK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|221724046|gb|ACM27202.1| peptidyl-tRNA hydrolase [Agrobacterium radiobacter K84]
Length = 238
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 97/185 (52%), Positives = 125/185 (67%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +D IH H F W KKF AEISEG+L G + +LIK
Sbjct: 1 MLLIVGLGNPGAKYQGNRHNIGFMAVDAIHRRHSFSPWAKKFRAEISEGELGGQKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E M FYKL + +VI+D+LDL RLKTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGESVGEAMRFYKLEP-SDLVVIYDELDLPAAKARLKTGGGHGGHNGIKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG+ Y+RLR+GIG P + HVLG+F+ +R +L P+ D +A + +L + ED
Sbjct: 120 HCGREYRRLRLGIGHPGVKELVQNHVLGDFAKVDRDWLEPLFDALADNADMLVRGEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|148253297|ref|YP_001237882.1| peptidyl-tRNA hydrolase [Bradyrhizobium sp. BTAi1]
gi|166199309|sp|A5ECT2|PTH_BRASB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146405470|gb|ABQ33976.1| peptidyl-tRNA hydrolase [Bradyrhizobium sp. BTAi1]
Length = 201
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F W+++F E SEG LD R IL+K
Sbjct: 1 MLMFVGLGNPGAKYARNRHNIGFMAVDEISRRHGFSPWRRRFQGETSEGTLDSERVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E F+KL + + V D+L+L G LR+K GGG AGHNGL+SIS
Sbjct: 61 PTTYMNESGRAVQEAAGFFKL-GVGDVTVFQDELELPPGKLRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+R+GIG P + HVL +F+ E ++ + +A + LL + D +F
Sbjct: 120 HLGNDYRRVRLGIGHPGVKELVHGHVLSDFAKSEMPWVEALCQAVADNAGLLTGKRDSTF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 ANKVH 184
>gi|254829304|ref|ZP_05233991.1| pth [Listeria monocytogenes FSL N3-165]
gi|255027041|ref|ZP_05299027.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL J2-003]
gi|258601717|gb|EEW15042.1| pth [Listeria monocytogenes FSL N3-165]
Length = 186
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y + ++E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNI-SIEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVINYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLNHIVS 186
+N
Sbjct: 179 VMNKYNQ 185
>gi|167755582|ref|ZP_02427709.1| hypothetical protein CLORAM_01096 [Clostridium ramosum DSM 1402]
gi|237734332|ref|ZP_04564813.1| peptidyl-tRNA hydrolase [Mollicutes bacterium D7]
gi|167704521|gb|EDS19100.1| hypothetical protein CLORAM_01096 [Clostridium ramosum DSM 1402]
gi|229382562|gb|EEO32653.1| peptidyl-tRNA hydrolase [Coprobacillus sp. D7]
Length = 184
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 105/186 (56%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GFM +D + + + KF ++ + G IL+K
Sbjct: 1 MKLIVGLGNPGKEYEGTRHNCGFMVVDELANKLNTEINQNKFKGLYTKVKYHGEDVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S++ MNF+KL + E+ +VI+DDLD+ G LRL+ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESVIAAMNFFKL-DKEDIIVIYDDLDMPVGKLRLRKTGSAGGHNGIKNIIA 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++KR+R+GI R ++ +VL F+ E + ID + ++ +
Sbjct: 120 HLSSQDFKRIRVGIDRH-KYMKVVDYVLSRFAKEETEAINQGIDKASDAVLDYLDHDFDY 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 IMNRYN 184
>gi|115523457|ref|YP_780368.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris BisA53]
gi|122297067|sp|Q07RP6|PTH_RHOP5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|115517404|gb|ABJ05388.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris BisA53]
Length = 201
Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats.
Identities = 78/185 (42%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGFM +D I H F W+++F E ++G + G R L+K
Sbjct: 1 MRLLVGLGNPGAKYQGNRHNIGFMALDEIARRHGFSPWRRRFQGETADGSIGGERVTLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ + +F+KL E +V+HD+++L LR+K GGG AGHNGL+SIS
Sbjct: 61 PLTFMNDSGRAVQDAASFFKLGLPE-IIVLHDEIELPAAKLRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y+R+RIG+G P + HVL +F+ ER ++ +++ I + LL D F
Sbjct: 120 HIGNEYRRVRIGVGHPGVKELVHGHVLNDFAKAERPWVEAMLEAITDNADLLVGDRDSQF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNKVH 184
>gi|315301105|ref|ZP_07872399.1| peptidyl-tRNA hydrolase [Listeria ivanovii FSL F6-596]
gi|313630526|gb|EFR98365.1| peptidyl-tRNA hydrolase [Listeria ivanovii FSL F6-596]
Length = 184
Score = 251 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 113/186 (60%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ +SE ++G + +L+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKAKFNGMVSEINVNGEKMLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +++ L+I+DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-MKDVLIIYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ AK +
Sbjct: 120 HVKTQEFNRIRVGVSRPSH-GEVINYVLGDFPKSEQADIIEAIQKSADAVEDFAKLPFIE 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 VMNKYN 184
>gi|15612631|ref|NP_240934.1| peptidyl-tRNA hydrolase [Bacillus halodurans C-125]
gi|14195082|sp|Q9KGJ3|PTH_BACHD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|10172680|dbj|BAB03787.1| stage V sporulation protein C (peptidyl-tRNA hydrolase) [Bacillus
halodurans C-125]
Length = 185
Score = 251 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF +D + + K + EG++DG + L+K
Sbjct: 1 MKLIVGLGNPGAKYDGTRHNVGFDVVDAVARRLNIEIKQSKANGLYGEGRIDGEKIFLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ + +Y + +E+ LVI+DDLDL G +RL+ G GHNG+KS+
Sbjct: 61 PQTFMNRSGESVRPFLEYYNM-EVEDLLVIYDDLDLPVGKIRLRQKGSAGGHNGMKSLIA 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++KR+R+G+ RP +++HVLG + E+ + ID A + K+ +
Sbjct: 120 HLGTSDFKRIRVGVDRPAPGETVVQHVLGRYRPEEKDAISEAIDLSAEAAEAFTKKPFLE 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 VMNTFN 185
>gi|292670806|ref|ZP_06604232.1| aminoacyl-tRNA hydrolase [Selenomonas noxia ATCC 43541]
gi|292647427|gb|EFF65399.1| aminoacyl-tRNA hydrolase [Selenomonas noxia ATCC 43541]
Length = 211
Score = 251 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 74/190 (38%), Positives = 120/190 (63%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG EY + +HN+GFM +D + + +W++ FH+ + E ++ G + L+K
Sbjct: 1 MKIIAGLGNPGAEYAKTKHNVGFMLMDALAAHLNAASWREAFHSLVLEVRIGGEKVFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG++L ++++YKL + E+ +V HDD+D+ GT+R++ GG GHNG+KSI
Sbjct: 61 PLTYMNNSGEALGPMLSYYKL-DTEDLVVAHDDMDIPAGTVRIRKKGGSGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +N+ R+RIGIGRPP +I HVL FS+ + + ID + ++ +A+
Sbjct: 120 HVGSENFARVRIGIGRPPAGWSVINHVLAPFSAEDVPRIREAIDYLLPAMECIAQDGTDL 179
Query: 180 FLNHIVSVRK 189
+N +K
Sbjct: 180 AMNRYNPHKK 189
>gi|217965701|ref|YP_002351379.1| peptidyl-tRNA hydrolase [Listeria monocytogenes HCC23]
gi|254783874|sp|B8DGL2|PTH_LISMH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|217334971|gb|ACK40765.1| peptidyl-tRNA hydrolase [Listeria monocytogenes HCC23]
gi|307569752|emb|CAR82931.1| pth [Listeria monocytogenes L99]
Length = 186
Score = 251 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVIHYVLGDFPKAEQPDIIAAIQKSADAIEDYAQTPFIE 178
Query: 180 FLNHIVS 186
+N
Sbjct: 179 VMNKYNQ 185
>gi|15966108|ref|NP_386461.1| peptidyl-tRNA hydrolase [Sinorhizobium meliloti 1021]
gi|307305662|ref|ZP_07585409.1| peptidyl-tRNA hydrolase [Sinorhizobium meliloti BL225C]
gi|307317665|ref|ZP_07597104.1| peptidyl-tRNA hydrolase [Sinorhizobium meliloti AK83]
gi|21263853|sp|Q92N67|PTH_RHIME RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|15075378|emb|CAC46934.1| Probable peptidyl-tRNA hydrolase [Sinorhizobium meliloti 1021]
gi|306896823|gb|EFN27570.1| peptidyl-tRNA hydrolase [Sinorhizobium meliloti AK83]
gi|306902365|gb|EFN32961.1| peptidyl-tRNA hydrolase [Sinorhizobium meliloti BL225C]
Length = 239
Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats.
Identities = 94/185 (50%), Positives = 128/185 (69%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D I F AW +KF +E+SEG++DG R +L+K
Sbjct: 1 MLIIAGLGNPGPKYAGNRHNIGFMAVDAIQRRQGFSAWSRKFKSEVSEGEIDGERVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG++L + M FYKL ++ +VI+D+LDL G R+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGEALGDAMRFYKLAP-KDIVVIYDELDLPAGKARIKTGGGHGGHNGIKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P + HVLG+F+ ++ +L +++ IA + +L K ED
Sbjct: 120 HCGKEYRRLRLGIGHPGVKDLVHAHVLGDFAKADQAWLSLLLEAIADNAAMLVKGEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|311898016|dbj|BAJ30424.1| putative peptidyl-tRNA hydrolase [Kitasatospora setae KM-6054]
Length = 195
Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats.
Identities = 80/185 (43%), Positives = 111/185 (60%), Gaps = 1/185 (0%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG EY NRHNIGFM ++ + K A+++EG+L G R +L +P
Sbjct: 12 WLVVGLGNPGKEYARNRHNIGFMVVELLAQRAGAKFKAHKSRAQVAEGRLAGRRVVLAEP 71
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+FMNLSG + + +FYK+P + +HD+LDLD+ LRLKTGGGD GHNGLKS+++
Sbjct: 72 MSFMNLSGGPVTALRDFYKVPTSA-IVAVHDELDLDYAALRLKTGGGDNGHNGLKSMTKS 130
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G +Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 131 LGPDYHRVRCGIGRPPGRMEVADFVLKDFSSTERKDLDWFVDRAADAVEALLSDGLERAQ 190
Query: 182 NHIVS 186
+ S
Sbjct: 191 QNYNS 195
>gi|323490991|ref|ZP_08096185.1| peptidyl-tRNA hydrolase [Planococcus donghaensis MPA1U2]
gi|323395347|gb|EGA88199.1| peptidyl-tRNA hydrolase [Planococcus donghaensis MPA1U2]
Length = 187
Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats.
Identities = 71/188 (37%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y + RHNIGF ID + S P + KF S + IL+K
Sbjct: 1 MKLIIGLGNPGKTYEDTRHNIGFKVIDYLASQWDAPLTQSKFKGMYSVSHRPEGKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++Y + L++ +VI+DDLDL G LRL+ G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGESVAALMDYYNI-ELKDIIVIYDDLDLPTGQLRLRQKGSAGGHNGIKSLIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + RLRIGI RPP + +VL FS+ E + I A + + +
Sbjct: 120 HLGNQEFNRLRIGISRPPAGMKVPDYVLQRFSTEEIPEMTAAIKKSAAACETWLSKPYIE 179
Query: 180 FLNHIVSV 187
+N +
Sbjct: 180 VMNEFNGI 187
>gi|281178390|dbj|BAI54720.1| peptidyl-tRNA hydrolase [Escherichia coli SE15]
Length = 194
Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ N + LV HD+LDL G + K G G GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGSGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|311070700|ref|YP_003975623.1| peptidyl-tRNA hydrolase [Bacillus atrophaeus 1942]
gi|310871217|gb|ADP34692.1| peptidyl-tRNA hydrolase [Bacillus atrophaeus 1942]
Length = 188
Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y RHN+GFM ID++ + KF+ G + G + +L+K
Sbjct: 1 MLVLAGLGNPGKNYENTRHNVGFMTIDQLAKEWNIELNQTKFNGLYGTGFVSGQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ L +M++Y + N E VI+DDLDL G +RL+T G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECLRPLMDYYDVGN-EELKVIYDDLDLPAGKIRLRTKGSAGGHNGIKSLIQ 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+RIGIGRP + ++ +VLG F+ E + I ++ + +
Sbjct: 120 HLGTSEFDRIRIGIGRPVNGMKVVDYVLGAFTKEEAPAIDEAISKSVKACEASLSKPFLE 179
Query: 180 FLNHIVS 186
+N +
Sbjct: 180 VMNEFNA 186
>gi|290894279|ref|ZP_06557246.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL J2-071]
gi|290556163|gb|EFD89710.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL J2-071]
Length = 186
Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVIHYVLGDFPKTEQPDIIAAIQKSADAIEDYAQTPFIE 178
Query: 180 FLNHIVS 186
+N
Sbjct: 179 VMNKYNQ 185
>gi|303239798|ref|ZP_07326322.1| peptidyl-tRNA hydrolase [Acetivibrio cellulolyticus CD2]
gi|302592735|gb|EFL62459.1| peptidyl-tRNA hydrolase [Acetivibrio cellulolyticus CD2]
Length = 190
Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 113/187 (60%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+F+V GLGNPG +Y RHN+GF IDR+ H K K A I +G ++G R IL+K
Sbjct: 4 LFVVIGLGNPGTKYDNTRHNVGFDTIDRLSKKHNIAVTKVKHKAVIGDGTIEGARVILVK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E+M +YK+P +EN ++++DD+DL G LR++ G HNG++S+
Sbjct: 64 PQTFMNLSGESVREIMEWYKIP-VENIIIVYDDIDLPVGKLRVRPKGSAGTHNGMRSVIY 122
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ ++ R+RIG+ +PP + VL FS ER + I+N ++ + K +
Sbjct: 123 QIQSDDFPRIRIGVDKPPQGWDLANFVLSKFSPDERKNVEEAIENAVGAVETIIKSGVDN 182
Query: 180 FLNHIVS 186
+N +
Sbjct: 183 AMNRFNT 189
>gi|182680480|ref|YP_001834626.1| peptidyl-tRNA hydrolase [Beijerinckia indica subsp. indica ATCC
9039]
gi|238691226|sp|B2IG63|PTH_BEII9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|182636363|gb|ACB97137.1| Aminoacyl-tRNA hydrolase [Beijerinckia indica subsp. indica ATCC
9039]
Length = 198
Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats.
Identities = 85/185 (45%), Positives = 121/185 (65%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIGFM ID I + PA++ +F SE L G + +L+K
Sbjct: 1 MLLFVGLGNPGKAYSANRHNIGFMAIDAIAREYGAPAFRARFQGLTSEITLSGEKIVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MN SG+S+ + ++FYK+ + +V HD+LDL G +R+K GGG+AGHNGLKSI++
Sbjct: 61 PETYMNESGRSVSDAVHFYKI-DASRVIVFHDELDLAPGKVRVKKGGGNAGHNGLKSITQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+Y+R+RIGIG P + +VLG+FS E ++ + +IA + PLLAK ED +F
Sbjct: 120 HITNDYRRVRIGIGHPGIKDMVRHYVLGDFSKTESAWVETLCLSIAVNAPLLAKGEDENF 179
Query: 181 LNHIV 185
N I
Sbjct: 180 QNKIF 184
>gi|320529007|ref|ZP_08030099.1| peptidyl-tRNA hydrolase [Selenomonas artemidis F0399]
gi|320138637|gb|EFW30527.1| peptidyl-tRNA hydrolase [Selenomonas artemidis F0399]
Length = 195
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 114/190 (60%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG EY + +HN+GFM +D + AWKK F + ++E ++ + L+K
Sbjct: 1 MKIIAGLGNPGAEYTQTKHNVGFMLVDALAQRLGVSAWKKAFSSLVAEVRIGSEKVFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG +L ++++YK+ + ++ +V+HDD+D+ G +R++T GG GHNG+KSI
Sbjct: 61 PQTYMNDSGSALGPMLSYYKI-DTKDLIVVHDDMDIPAGAVRIRTKGGSGGHNGIKSIIS 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+RIGIGRPP +I HVL FS+ + + I + ++ +
Sbjct: 120 HVGTEEFPRVRIGIGRPPVGWTVINHVLAPFSTDDASLVGEAIGYLLPAVEYIVTDGVDM 179
Query: 180 FLNHIVSVRK 189
+N +K
Sbjct: 180 AMNRFNPRKK 189
>gi|121603806|ref|YP_981135.1| peptidyl-tRNA hydrolase [Polaromonas naphthalenivorans CJ2]
gi|120592775|gb|ABM36214.1| peptidyl-tRNA hydrolase [Polaromonas naphthalenivorans CJ2]
Length = 230
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 102/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG EY RHN GF ID + P + K +H +++ ++G L+K
Sbjct: 24 KLFVGLGNPGPEYEATRHNAGFWWIDALSRELKAPLSLDKNYHGQVARTTVNGQTVWLLK 83
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + F+K+ E LV HD+LD+ G ++LK GG AGHNGL+ I
Sbjct: 84 PLTFMNLSGKSVAALARFFKISPAE-ILVAHDELDIVPGQVKLKFGGSHAGHNGLRDIHA 142
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLRIG+G P A +I VL S R + ID +++P L K E
Sbjct: 143 QLGSADYWRLRIGVGHPGVKAEVINWVLKKPSQEHRVAIEDCIDRCLKAVPELLKGEMEK 202
Query: 180 FLNHIVS 186
I +
Sbjct: 203 ATMMIHT 209
>gi|90418285|ref|ZP_01226197.1| peptidyl-tRNA hydrolase [Aurantimonas manganoxydans SI85-9A1]
gi|90337957|gb|EAS51608.1| peptidyl-tRNA hydrolase [Aurantimonas manganoxydans SI85-9A1]
Length = 244
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 94/185 (50%), Positives = 126/185 (68%), Gaps = 2/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y NRHNIGFM ++ I F W KKF AEISEGQ+ G + +LIK
Sbjct: 1 MLLIAGLGNPGSRYAGNRHNIGFMALEEIARDPAFSPWSKKFSAEISEGQIGGEKVVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ + F+KL +VIHD+LDL G LR+KTGGG+ GHNGL+SI
Sbjct: 61 PQTFMNESGRSVGDAARFFKLEP-SQIVVIHDELDLPPGKLRVKTGGGNGGHNGLRSIDA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K+Y+R+R+GIG P + + +VLG+F+ +R +L P I+ +AR + LAK ED
Sbjct: 120 HLGTKDYRRVRMGIGHPGNKDAVSPYVLGDFAKVDREWLEPFIEAVARHVDSLAKGEDAM 179
Query: 180 FLNHI 184
F+N +
Sbjct: 180 FMNKV 184
>gi|308171944|ref|YP_003918649.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens DSM 7]
gi|307604808|emb|CBI41179.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens DSM 7]
gi|328551754|gb|AEB22246.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens TA208]
gi|328910014|gb|AEB61610.1| Peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens LL3]
Length = 188
Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y RHN+GFM ID + K KF+ G + G + +L+K
Sbjct: 1 MLVIAGLGNPGKTYENTRHNVGFMAIDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ L ++++Y + E+ VI+DDLDL G +RL+T G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECLRPLLDYYD-ADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQ 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+RIGIGRP + ++ +VLG F+ E + + ++ + +
Sbjct: 120 HLGTPEFDRVRIGIGRPANGMKVVDYVLGAFTKEEAPHINDAVSKTVKACEASLTKPFLE 179
Query: 180 FLNHIVS 186
+N +
Sbjct: 180 VMNEFNA 186
>gi|163815684|ref|ZP_02207056.1| hypothetical protein COPEUT_01864 [Coprococcus eutactus ATCC 27759]
gi|158448989|gb|EDP25984.1| hypothetical protein COPEUT_01864 [Coprococcus eutactus ATCC 27759]
Length = 186
Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN GF ID + H K A I +G ++G + IL
Sbjct: 1 MKLIVGLGNPGAKYAGTRHNAGFSVIDELAERHNIKVDTCKHKALIGKGVINGEKVILAM 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ +M+FYKL +++ +V++DD+DLD G +R++ G GHNG+K+I
Sbjct: 61 PQTFMNLSGESVRAIMDFYKL-TVDDLIVVYDDIDLDVGKIRIREKGSAGGHNGMKNIIL 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ R+R+G+G+ P+ + HVL FS + F+ +L ++ V+
Sbjct: 120 HSGSQDFVRVRVGVGKKPEHMDLADHVLSRFSREDLPFMRESCGKACDALEVILSDGAVA 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNRYN 185
>gi|310777820|ref|YP_003966153.1| peptidyl-tRNA hydrolase [Ilyobacter polytropus DSM 2926]
gi|309747143|gb|ADO81805.1| peptidyl-tRNA hydrolase [Ilyobacter polytropus DSM 2926]
Length = 189
Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats.
Identities = 76/189 (40%), Positives = 114/189 (60%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHNIGF ID + +++KF I E + + L+K
Sbjct: 1 MKLIVGLGNPGEKYSKTRHNIGFEVIDMLAEDLKVSGFREKFQGLIGETVIKDEKVFLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG S+ EV+ FYK+ E+ +VI+DD+DLD G L++K G AGHNG+KSI
Sbjct: 61 PQTFMNLSGNSINEVIKFYKIDPEEDLIVIYDDMDLDLGQLKIKVKGSPAGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+N+ R++ GIG+ + VLG FS E + P+I+N +++ L +D+S
Sbjct: 121 HIGENFLRVKCGIGKAKSREETVNFVLGRFSKEESNEVDPMIENASKAAQSLITAKDISR 180
Query: 181 LNHIVSVRK 189
+ + +K
Sbjct: 181 VMQKYNKKK 189
>gi|183598957|ref|ZP_02960450.1| hypothetical protein PROSTU_02399 [Providencia stuartii ATCC 25827]
gi|188021171|gb|EDU59211.1| hypothetical protein PROSTU_02399 [Providencia stuartii ATCC 25827]
Length = 196
Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats.
Identities = 72/190 (37%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H ++ KF + L+G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEEAKFFGYTARINLNGNDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+L V NFY++ N + LV HD+LDL G ++K GG + GHNGLK I
Sbjct: 65 PTTFMNLSGKSVLAVANFYRI-NPDEILVAHDELDLPPGVAKMKLGGSNGGHNGLKDIQN 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K N + RLRIGIG P D ++ VLG + E+ + ID R +L
Sbjct: 124 KFSNNPNFYRLRIGIGHPGDKNKVVGFVLGKPPASEQKLIDEAIDESLRCTDILLSDGMD 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAINRLHSFK 193
>gi|294496924|ref|YP_003560624.1| peptidyl-tRNA hydrolase [Bacillus megaterium QM B1551]
gi|294346861|gb|ADE67190.1| peptidyl-tRNA hydrolase [Bacillus megaterium QM B1551]
Length = 185
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID+I K KF+ G + G + IL+K
Sbjct: 1 MKLIVGLGNPGKEYDRTRHNIGFMAIDKIAEQFMISLDKTKFNGIYGTGIIKGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M+++ + ++E+ LVI+DDLDL G +RL+T G GHNG+KSI +
Sbjct: 61 PLTYMNLSGESIRPLMDYFDI-DVEDLLVIYDDLDLPCGKVRLRTKGSPGGHNGIKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+RIGI RP + ++ +VLG F+ E + + + + +
Sbjct: 120 HLKTQEFNRIRIGIDRPKNGMKVVDYVLGRFTEDEMVHMEEAMKTSVHASEDFLGKTFLE 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 VMNRYN 185
>gi|187935710|ref|YP_001884405.1| peptidyl-tRNA hydrolase [Clostridium botulinum B str. Eklund 17B]
gi|238691600|sp|B2TI10|PTH_CLOBB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|187723863|gb|ACD25084.1| aminoacyl-tRNA hydrolase [Clostridium botulinum B str. Eklund 17B]
Length = 191
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 75/189 (39%), Positives = 112/189 (59%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHNIGF ID I + + ++KF EG + + IL+K
Sbjct: 1 MFLIVGLGNPGSKYDNTRHNIGFEVIDNISNEYNIDINRQKFRGVYGEGFIANNKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG S+ EV NFYK+ N EN +VI+DD+ LD G LR++ G GHNG+KSI
Sbjct: 61 PTTYMNLSGDSVREVANFYKISN-ENIIVIYDDISLDIGRLRIREKGSAGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+++G+G+P ++ +VLG FS E+ L I+ S+ + K++ S
Sbjct: 120 NLSTDVFPRIKVGVGQP--NIDLVNYVLGKFSKEEKEVLKESIEVATNSVEEIIKQDVNS 177
Query: 180 FLNHIVSVR 188
+N +
Sbjct: 178 AMNKFNGFK 186
>gi|150014977|ref|YP_001307231.1| peptidyl-tRNA hydrolase [Clostridium beijerinckii NCIMB 8052]
gi|189038283|sp|A6LPJ5|PTH_CLOB8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|149901442|gb|ABR32275.1| Aminoacyl-tRNA hydrolase [Clostridium beijerinckii NCIMB 8052]
Length = 191
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 72/189 (38%), Positives = 112/189 (59%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG+EY RHNIGF ID I + ++KF EG ++G + +L+K
Sbjct: 1 MFLIVGLGNPGNEYENTRHNIGFKVIDNIAKEYNIEINRQKFKGMYGEGFINGKKVMLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ EV++FY L N E LVI+DD+ L+ G LR++ G GHNG+KSI
Sbjct: 61 PTTYMNLSGESVREVVDFYNLNNDE-ILVIYDDISLEVGKLRIREKGSAGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ R+++G+G+P +++HVLG F+ E L I+ ++ + K + +
Sbjct: 120 HLNSEIFSRIKVGVGQP--NGDLVKHVLGKFTKEETAILSESIEASTKAAAEIIKNDVKT 177
Query: 180 FLNHIVSVR 188
+N +
Sbjct: 178 AMNQFNGFK 186
>gi|220932953|ref|YP_002509861.1| Aminoacyl-tRNA hydrolase [Halothermothrix orenii H 168]
gi|219994263|gb|ACL70866.1| Aminoacyl-tRNA hydrolase [Halothermothrix orenii H 168]
Length = 187
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 69/188 (36%), Positives = 113/188 (60%), Gaps = 3/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILI 59
M++V GLGNPG +Y E RHNIGF I+R+ H A KF A G + G + +L
Sbjct: 1 MYLVVGLGNPGDKYAETRHNIGFQVIERLARKHKIKAKNYPKFEALCGRGMIRGQKVMLA 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+P T+MN SG+++ +++++Y +L+N ++I+DDLDL G +R++ G GHNG+KSI
Sbjct: 61 QPLTYMNNSGRAVRKIIDYYDF-SLDNIIIIYDDLDLPPGKIRIRKKGSSGGHNGVKSII 119
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ + R+RIGIGRPP +++ +VLG FSS + + ++D ++ + ++
Sbjct: 120 NCLDTREFPRIRIGIGRPPAGVNVVDYVLGYFSSEDSEVMSDVLDTTVEAVETILEKGLE 179
Query: 179 SFLNHIVS 186
+N S
Sbjct: 180 QAMNIFNS 187
>gi|58039601|ref|YP_191565.1| peptidyl-tRNA hydrolase [Gluconobacter oxydans 621H]
gi|68052871|sp|Q5FRT7|PTH_GLUOX RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|58002015|gb|AAW60909.1| Peptidyl-tRNA hydrolase [Gluconobacter oxydans 621H]
Length = 189
Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats.
Identities = 82/186 (44%), Positives = 115/186 (61%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP +RHNIGFM +D I H F W+K+F E SEG + G + +L+K
Sbjct: 1 MRLWTGLGNPEPGMSRHRHNIGFMAVDEIARRHGFSPWRKRFRGETSEGVIGGQKILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG S+ + F+K+ ++ V HD+LDL FG LR+K GGG AGHNGL+S+ +
Sbjct: 61 PMTYMNRSGDSVQQAAQFFKIAQ-DDITVFHDELDLAFGKLRIKRGGGAAGHNGLRSMDK 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y R+R+GIG P + HVLGNF+ E L ++ IA + PLLAK+E +
Sbjct: 120 CLPGPDYWRVRMGIGHPGHKDRVTGHVLGNFAKAEEPELERWLEAIADAAPLLAKKEHEA 179
Query: 180 FLNHIV 185
F+ +
Sbjct: 180 FMTKVA 185
>gi|253990020|ref|YP_003041376.1| peptidyl-tRNA hydrolase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781470|emb|CAQ84633.1| peptidyl-tRNA hydrolase [Photorhabdus asymbiotica]
Length = 196
Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + + G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLAQSHNQSLKEESKFFGYTARINIYGHDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + +FY++ + LV HD+LDL G ++K GG GHNGLK I
Sbjct: 65 PTTFMNLSGKSVAALASFYRI-QPDEILVAHDELDLPPGVAKMKLGGSHGGHNGLKDIQN 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG + E+ + ID R +L K++
Sbjct: 124 KFGNNPNFYRLRIGIGHPGDKNKVVGFVLGTPPTNEKKLIDDAIDEALRCTDILIKQDMD 183
Query: 179 SFLNHIVSVR 188
+N + +
Sbjct: 184 KAINRLHGFK 193
>gi|134297988|ref|YP_001111484.1| aminoacyl-tRNA hydrolase [Desulfotomaculum reducens MI-1]
gi|172044208|sp|A4J0Q6|PTH_DESRM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|134050688|gb|ABO48659.1| peptidyl-tRNA hydrolase [Desulfotomaculum reducens MI-1]
Length = 206
Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats.
Identities = 73/182 (40%), Positives = 104/182 (57%), Gaps = 4/182 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY + RHNIGFM IDR+ K + A+I + + + IL K
Sbjct: 1 MKLIVGLGNPGTEYAKTRHNIGFMVIDRLADESRVSTEKNQHKAQICQITIGSEKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQS++ +MN+YKL + + VI DD+DL G LR++ G G GLK+I E
Sbjct: 61 PQTYMNLSGQSVVALMNWYKL-SPDELFVITDDMDLPPGVLRIRKNGSAGGQRGLKNIIE 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GIGRP A + HVLG S E + P I ++ + +
Sbjct: 120 LLGTQQFPRMRVGIGRPEHGA--VDHVLGKISEAEAELINPAIQTAVEAVKVWVLEGTQA 177
Query: 180 FL 181
+
Sbjct: 178 AM 179
>gi|118591924|ref|ZP_01549319.1| peptidyl-tRNA hydrolase [Stappia aggregata IAM 12614]
gi|118435567|gb|EAV42213.1| peptidyl-tRNA hydrolase [Stappia aggregata IAM 12614]
Length = 275
Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats.
Identities = 85/186 (45%), Positives = 122/186 (65%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG Y NRHNIGFM +D IH H F WK +F ++SEG+L + +L+
Sbjct: 9 MKLIVGLGNPGARYEGNRHNIGFMAVDEIHRRHSGFQPWKARFQGQVSEGRLGSEKVLLL 68
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG+S+ E M FYK+ E+ +VI+D+LDL R+K GGG GHNGL+SI+
Sbjct: 69 KPSTYMNESGRSVGEAMRFYKIEP-EDIVVIYDELDLPPAKFRMKVGGGHGGHNGLRSIT 127
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G++Y+RLR+GIG P D + +VLG+F+ +R +L P++ +A LLA+ +D
Sbjct: 128 AHIGESYRRLRLGIGHPGDKKLVSNYVLGDFAKADRDWLEPLLMEVADQAGLLAEGKDSQ 187
Query: 180 FLNHIV 185
F N +
Sbjct: 188 FANKLT 193
>gi|30685853|ref|NP_173279.2| peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana]
gi|134035412|sp|Q8GW64|PTHC_ARATH RecName: Full=Peptidyl-tRNA hydrolase, chloroplastic; AltName:
Full=C-PTH; Flags: Precursor
gi|332191593|gb|AEE29714.1| Peptidyl-tRNA hydrolase [Arabidopsis thaliana]
Length = 288
Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 109/193 (56%), Gaps = 6/193 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D + F A +G + + +L KP
Sbjct: 95 WLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKP 154
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ ++++FYK+P L+ LV++DDLDL FG LRL GG GHNG++SI ++
Sbjct: 155 QTFMNLSGESVGQIVSFYKIP-LKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 213
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED-- 177
+++ RLRIGIGRPP VL F+ E+ L ++ +L
Sbjct: 214 LKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNK 273
Query: 178 -VSFLNHIVSVRK 189
+F+N S+ +
Sbjct: 274 SATFVNTRKSMEQ 286
>gi|225375821|ref|ZP_03753042.1| hypothetical protein ROSEINA2194_01453 [Roseburia inulinivorans DSM
16841]
gi|225212256|gb|EEG94610.1| hypothetical protein ROSEINA2194_01453 [Roseburia inulinivorans DSM
16841]
Length = 198
Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 112/190 (58%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNP +Y + RHNIGF +D + + + K A +G ++G++ +L K
Sbjct: 9 MFLIVGLGNPTKQYEKTRHNIGFDVMDALADKYNISISENKHKALCGKGVIEGMKVVLAK 68
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E++N+YKL +V+ DD+ L+ G +R++ G GHNG+K+I
Sbjct: 69 PQTYMNLSGESVAELVNYYKLDPESELIVVFDDISLEPGNIRIRKKGSAGGHNGIKNIIA 128
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +N+ R+++G+G P + +VLG+FS+ +R + I + + L+ + E
Sbjct: 129 MTGTQNFMRIKVGVGEKPKGWDLADYVLGHFSTEDRAKVEEAIGHAMDATVLMMQGEVDK 188
Query: 180 FLNHIVSVRK 189
+N S K
Sbjct: 189 AMNDYNSKNK 198
>gi|329769844|ref|ZP_08261244.1| peptidyl-tRNA hydrolase [Gemella sanguinis M325]
gi|328838020|gb|EGF87642.1| peptidyl-tRNA hydrolase [Gemella sanguinis M325]
Length = 185
Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGFM +D + K KF+AE + +G + IL+K
Sbjct: 1 MKLMVGLGNPGKQYENTRHNIGFMILDELAKSWGVSFDKNKFNAEYAMTHYNGEKYILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG++L + +++++ ++E+ LVI+DDLD +LK G GHNG+KSI
Sbjct: 61 PTTYMNLSGEALRKFYDYFEI-DIEDILVIYDDLDTKTANFKLKAKGSSGGHNGIKSIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGI RP ++ +VLG FS E + I + +K V
Sbjct: 120 HLGTEKFNRLKIGIDRPTPPMKVVDYVLGRFSKDEMVEIEKIYSKSINCIEDFSKMNFVE 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 LMNKYN 185
>gi|226323671|ref|ZP_03799189.1| hypothetical protein COPCOM_01446 [Coprococcus comes ATCC 27758]
gi|225207855|gb|EEG90209.1| hypothetical protein COPCOM_01446 [Coprococcus comes ATCC 27758]
Length = 191
Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNP +Y RHN+GF +DR+ + KK A I +G ++G + +L+K
Sbjct: 1 MFIIAGLGNPDEKYQGTRHNVGFDVVDRLAEKYQIAIDTKKHRALIGKGVIEGQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ ++ +YK+ E LVI+DD+ L+ G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESIRSLVEYYKIDPEEELLVIYDDISLEVGQLRIRRKGSAGGHNGIKNIIA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G P + +VLG FS +R + D + L+ +
Sbjct: 121 NLGSSVFPRIKVGVGEKPKGYDLADYVLGKFSKEDRVLMEEGYDLACEASALIMQGAIDQ 180
Query: 180 FLNHIVSVRK 189
+N +K
Sbjct: 181 AMNEYNQKKK 190
>gi|144898694|emb|CAM75558.1| peptidyl-tRNA hydrolase [Magnetospirillum gryphiswaldense MSR-1]
Length = 232
Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats.
Identities = 84/185 (45%), Positives = 123/185 (66%), Gaps = 2/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY +NRHNIGFM D + H F W+ KF ++EG +DG++ + +K
Sbjct: 1 MILVVGLGNPGSEYSQNRHNIGFMAADELVRRHSFGPWRAKFQGMLAEGSIDGVKVLALK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSGQS+ F K+P +E+ +VIHD+LD+ G +++K GGG GHNGLKSI
Sbjct: 61 PMTYMNLSGQSVAAAARFLKIP-VEDVVVIHDELDVAPGRVKVKRGGGAGGHNGLKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+NY+R+R+GIG P D + +VL +F+ E ++ P+ID +A +LP L ++ F
Sbjct: 120 HLGQNYRRVRLGIGHPGDKDRVSGYVLADFAKAE-TWVTPLIDAVAEALPKLLAGDEAGF 178
Query: 181 LNHIV 185
+N +
Sbjct: 179 MNKVA 183
>gi|299536724|ref|ZP_07050034.1| peptidyl-tRNA hydrolase [Lysinibacillus fusiformis ZC1]
gi|298727838|gb|EFI68403.1| peptidyl-tRNA hydrolase [Lysinibacillus fusiformis ZC1]
Length = 188
Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+ GLGNPG Y RHNIGF ID + P KF+ + + +L+K
Sbjct: 1 MKIIVGLGNPGKPYEHTRHNIGFDVIDALAEKWGTPLTNSKFNGMYTTVHRPEGKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M+++ + +E+ +VI+DDLDL+ G LRL+ G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECVGPLMDYFDI-EIEDLIVIYDDLDLETGKLRLRQKGSAGGHNGIKSLIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GI RPP + +VL FS ++ + I N ++ + +
Sbjct: 120 HLGTQEFNRIRVGINRPPAGMKVADYVLAKFSKEDQVLMQDAIVNSVNAVEASLSKPFLD 179
Query: 180 FLNHIV 185
+NH
Sbjct: 180 VMNHFN 185
>gi|92118570|ref|YP_578299.1| peptidyl-tRNA hydrolase [Nitrobacter hamburgensis X14]
gi|119390968|sp|Q1QIV8|PTH_NITHX RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|91801464|gb|ABE63839.1| peptidyl-tRNA hydrolase [Nitrobacter hamburgensis X14]
Length = 204
Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats.
Identities = 78/185 (42%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F W+++F E SEG LD R +L+K
Sbjct: 1 MRLFVGLGNPGTKYQGNRHNIGFMVVDEIARRHGFAPWRRRFQGEASEGALDQERVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ + F+KL + +V HD+++L +R+K GGG AGHNGL+SIS
Sbjct: 61 PATYMNESGNAVQDAARFFKLTEG-DVVVFHDEIELPPAKVRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y+R+R+G+G P + HVL +F+ ER ++ ++D +A + LL D +F
Sbjct: 120 HIGNEYRRVRLGVGHPGVKERVHAHVLNDFAKSERPWVEALVDVVAENAALLVTARDSAF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNKVH 184
>gi|331090627|ref|ZP_08339478.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401067|gb|EGG80662.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 190
Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 108/190 (56%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNP +Y RHN+GF ID I + +K A +G + G + IL K
Sbjct: 1 MYIIVGLGNPTSQYEGTRHNVGFDVIDAIADKYNITMDIRKHRAFCGKGIIAGQKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ +++++K+ + +VI+DD+ LD G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESVRSLVDYFKIDEEQELIVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G P + +VLG+FS ER + N +++ L+ E +
Sbjct: 121 HLGHSVFPRIKVGVGEKPKQYDLADYVLGHFSKAEREVMEDGYQNAVKAIELMVNDEIET 180
Query: 180 FLNHIVSVRK 189
+N K
Sbjct: 181 AMNEFNKKTK 190
>gi|258510198|ref|YP_003183632.1| peptidyl-tRNA hydrolase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257476924|gb|ACV57243.1| peptidyl-tRNA hydrolase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 191
Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 1/188 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GFM ID + + FHA + + + G + +L+K
Sbjct: 1 MKVIVGLGNPGREYERTRHNAGFMAIDILAEKLAARVDQADFHALVGDARYAGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN+SG S+ E++ +Y++ E+ +V++DD+D G +RLK G GHNG+KSI E
Sbjct: 61 PHTYMNVSGLSVGEIVRYYRIDPAEDLMVLYDDMDFPPGVVRLKAQGSAGGHNGIKSIIE 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+RIGIGRPP A I+ +VLG FS E + ++ A + +R
Sbjct: 121 SLGTEKFGRVRIGIGRPPKGAPIVPYVLGAFSREEEPHVRRALETAADAALYAVERGFAE 180
Query: 180 FLNHIVSV 187
+ +
Sbjct: 181 AMTRYNAA 188
>gi|118444703|ref|YP_877115.1| peptidyl-tRNA hydrolase [Clostridium novyi NT]
gi|166199328|sp|A0PXL3|PTH_CLONN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118135159|gb|ABK62203.1| peptidyl-tRNA hydrolase [Clostridium novyi NT]
Length = 188
Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 111/189 (58%), Gaps = 3/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG EY RHN+GF ID I + KKKF +G + + IL+K
Sbjct: 1 MFLIVGLGNPGKEYEHTRHNVGFDIIDVISEKYNIDLNKKKFKGMYGDGTIANEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ EV +FYK+P EN +VI+DD+ L+ G +R++ G GHNG+K+I
Sbjct: 61 PLTYMNLSGESIKEVTDFYKIPK-ENVIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G+P ++ HVLG F+ +R L + + + + + ++
Sbjct: 120 HFGSDVFPRIKVGVGQPVQR-DLVSHVLGKFNKDDREILSKVFEAASDAAENIIEKGTAE 178
Query: 180 FLNHIVSVR 188
+N +
Sbjct: 179 AMNKFNGFK 187
>gi|153814528|ref|ZP_01967196.1| hypothetical protein RUMTOR_00742 [Ruminococcus torques ATCC 27756]
gi|317500571|ref|ZP_07958792.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089328|ref|ZP_08338229.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 3_1_46FAA]
gi|145848022|gb|EDK24940.1| hypothetical protein RUMTOR_00742 [Ruminococcus torques ATCC 27756]
gi|316898004|gb|EFV20054.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330405509|gb|EGG85041.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 3_1_46FAA]
Length = 193
Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 108/190 (56%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNP +Y RHN+GF IDRI + KK A I +G + G + IL K
Sbjct: 1 MFIIAGLGNPTKQYEGTRHNVGFEVIDRISEKYNIDVDAKKHRALIGKGIIQGQKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ ++++YK+ +VI+DD+ LD G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESVRSLLDYYKVDEEHELIVIYDDISLDVGQLRIRAKGSAGGHNGMKNIIA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+++G+G P + +VLG+FS E + D+ ++ L+ +
Sbjct: 121 HLGSQVFPRIKVGVGEKPAKYDLADYVLGHFSKGEAKLMDEGYDHAVHAVELIVSGQINE 180
Query: 180 FLNHIVSVRK 189
+N +K
Sbjct: 181 AMNEYNRKKK 190
>gi|91978461|ref|YP_571120.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris BisB5]
gi|119390993|sp|Q131M0|PTH_RHOPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|91684917|gb|ABE41219.1| peptidyl-tRNA hydrolase [Rhodopseudomonas palustris BisB5]
Length = 207
Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 120/185 (64%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +NRHNIGFM ID I H F W+++F E ++G LDG R L+K
Sbjct: 1 MRLFVGLGNPGSKYQDNRHNIGFMVIDEIARRHGFSPWRRRFQGETADGSLDGERITLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E ++FYK+ + E V HD+++L LR+K GGG AGHNGL+SIS
Sbjct: 61 PLTYMNESGRAVQEAVSFYKIGHGE-VAVFHDEIELPPAKLRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + HVLG+F+ ER ++ + + +A + L+AK + +F
Sbjct: 120 HIGNDYLRVRLGVGHPGVKELVHGHVLGDFAKSERPWVAALAEAVADNAGLIAKGREATF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 ANKVH 184
>gi|82544342|ref|YP_408289.1| peptidyl-tRNA hydrolase [Shigella boydii Sb227]
gi|119391006|sp|Q31ZP7|PTH_SHIBS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|81245753|gb|ABB66461.1| peptidyl-tRNA hydrolase [Shigella boydii Sb227]
Length = 194
Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ N + LV HD+LDL G + K G GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLAGAHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|327188357|gb|EGE55574.1| peptidyl-tRNA hydrolase protein [Rhizobium etli CNPAF512]
Length = 243
Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats.
Identities = 95/185 (51%), Positives = 127/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH H F W KKF AEI+EG+L G + +LIK
Sbjct: 1 MLIIAGLGNPGGKYAGNRHNIGFMAVDAIHRRHSFSPWSKKFKAEIAEGELGGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E M FYKL + + I+D+LDL G RLKTGGG GHNG++S+
Sbjct: 61 PQTYMNLSGEAVGEAMRFYKL-QPADLVAIYDELDLSPGKARLKTGGGHGGHNGIRSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P + HVLG+F+ +R +L P++D +A + +L + ED
Sbjct: 120 HCGKEYRRLRLGIGHPGIKEMVQNHVLGDFAKADRDWLEPLLDTLADNADMLVRNEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|238922869|ref|YP_002936382.1| aminoacyl-tRNA hydrolase [Eubacterium rectale ATCC 33656]
gi|259535182|sp|C4ZBV8|PTH_EUBR3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238874541|gb|ACR74248.1| aminoacyl-tRNA hydrolase [Eubacterium rectale ATCC 33656]
gi|291523767|emb|CBK89354.1| peptidyl-tRNA hydrolase [Eubacterium rectale DSM 17629]
gi|291528768|emb|CBK94354.1| peptidyl-tRNA hydrolase [Eubacterium rectale M104/1]
Length = 186
Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats.
Identities = 72/183 (39%), Positives = 107/183 (58%), Gaps = 1/183 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNP +Y RHNIGF ID + + KK A G ++G++ +L+K
Sbjct: 1 MYVIVGLGNPDKKYEHTRHNIGFDVIDALADKYNISVTDKKHKALCGSGVIEGMKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ EVMNFYKL E +VI DD+ L+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNLSGESVAEVMNFYKLDPDEEMIVIFDDISLEPGRIRIRKKGSAGGHNGIKSIIA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+++G+G P + HVLG FSS +R + I + + L+ + E
Sbjct: 121 MTGTQGFSRIKVGVGEKPQGWDLADHVLGRFSSEDRAKVEEAIGHAMDAAVLMMQGETDK 180
Query: 180 FLN 182
+N
Sbjct: 181 AMN 183
>gi|119384009|ref|YP_915065.1| peptidyl-tRNA hydrolase [Paracoccus denitrificans PD1222]
gi|166229430|sp|A1B1H5|PTH_PARDP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119373776|gb|ABL69369.1| peptidyl-tRNA hydrolase [Paracoccus denitrificans PD1222]
Length = 235
Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats.
Identities = 86/182 (47%), Positives = 120/182 (65%), Gaps = 1/182 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHN+GFM ++RI H F W+ +F EI+EG+L R L+K
Sbjct: 1 MKLIVGLGNPGAKYAANRHNVGFMAVERIAGDHGFSPWRARFQGEIAEGRLGETRVTLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E M + KL ++ +V+HD+LDL G +RLKTGGG AGHNGL+S+ +
Sbjct: 61 PATFMNLSGQSVGEAMRYLKLAP-QDVIVLHDELDLAPGKVRLKTGGGHAGHNGLRSLHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y+RLRIGIG P D + +VL +F+ E+ L ++ I+ LA +D F
Sbjct: 120 HIGEGYRRLRIGIGHPGDKDRVAGYVLSDFAKAEQAGLDDLLRGISDGAAALAAGDDARF 179
Query: 181 LN 182
+N
Sbjct: 180 MN 181
>gi|325293588|ref|YP_004279452.1| Peptidyl-tRNA hydrolase [Agrobacterium sp. H13-3]
gi|325061441|gb|ADY65132.1| Peptidyl-tRNA hydrolase [Agrobacterium sp. H13-3]
Length = 238
Score = 249 bits (638), Expect = 9e-65, Method: Composition-based stats.
Identities = 95/185 (51%), Positives = 126/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D + F W +KF AEISEG++ G + +L+K
Sbjct: 1 MKIIAGLGNPGAQYAGNRHNIGFMTVDALQRLPSFSPWARKFKAEISEGEIGGEKVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ E M F+KL + +VIHD+LDL G R+KTGGG GHNGLKSI
Sbjct: 61 PLTYMNLSGESVGEAMRFFKLAPA-DIIVIHDELDLLAGRARIKTGGGHGGHNGLKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P D + HVLG+F+ +R +L P++D IA + +L K ED
Sbjct: 120 HCGKEYRRLRLGIGHPGDKERVHGHVLGDFAKTDRVWLDPLLDAIADNAAMLVKSEDSQL 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNKLA 184
>gi|254832466|ref|ZP_05237121.1| peptidyl-tRNA hydrolase [Listeria monocytogenes 10403S]
Length = 186
Score = 249 bits (638), Expect = 9e-65, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GF+ +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFVVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KGEVINYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLNHIVS 186
+N
Sbjct: 179 VMNKYNQ 185
>gi|169347360|ref|ZP_02866298.1| hypothetical protein CLOSPI_00075 [Clostridium spiroforme DSM 1552]
gi|169293977|gb|EDS76110.1| hypothetical protein CLOSPI_00075 [Clostridium spiroforme DSM 1552]
Length = 184
Score = 249 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 107/186 (57%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GFM ID + S + KF ++ + G IL+K
Sbjct: 1 MKLIVGLGNPGKEYAGTRHNCGFMVIDHLASKLNVDVDQNKFKGLYAKVKYHGEDIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ VMNF+K+ + E+ LVI+DDLD+ G LRL+ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESVNAVMNFFKI-DKEDLLVIYDDLDMPVGKLRLRKTGSAGGHNGIKNIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++KR+R+GI R ++ +VL FS E + I+N A ++ +
Sbjct: 120 HLNSQDFKRIRVGIDRH-KYMNVADYVLSRFSKVESEAIEQGIENAANAVLDYLDNDFNH 178
Query: 180 FLNHIV 185
+N+
Sbjct: 179 AMNYYN 184
>gi|317495444|ref|ZP_07953813.1| peptidyl-tRNA hydrolase [Gemella moribillum M424]
gi|316914503|gb|EFV35980.1| peptidyl-tRNA hydrolase [Gemella moribillum M424]
Length = 185
Score = 249 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 104/186 (55%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGFM +D + K KF+A+ + +G++ +LIK
Sbjct: 1 MKLIVGLGNPGKQYENTRHNIGFMILDELAKAWNINFDKNKFNADYAITYYNGIKYLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG++L + +++++ N+E+ LVI+DDLD +LK G GHNGLKSI
Sbjct: 61 PTTYMNLSGEALRKFYDYFEI-NIEDILVIYDDLDTKTANFKLKAKGSSGGHNGLKSIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGI RP ++ +VLG FS E + I + +K V
Sbjct: 120 HLGTEKFNRLKIGIDRPTPPMKVVDYVLGRFSKDEIIDIEKIYSKSINCIEDFSKMSFVE 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 LMNKYN 185
>gi|299820652|ref|ZP_07052541.1| aminoacyl-tRNA hydrolase [Listeria grayi DSM 20601]
gi|299817673|gb|EFI84908.1| aminoacyl-tRNA hydrolase [Listeria grayi DSM 20601]
Length = 184
Score = 249 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GFM +D + + P K K + ++ G + + +L+K
Sbjct: 1 MKMIVGLGNPGMKYERTRHNVGFMVVDELSYRYQLPWKKVKQNGMVATGMIGSEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + +M++Y + +E+ +VI+DDLDL G +RL+T G GHNG+KSI +
Sbjct: 61 PLTFMNESGLCVGPLMDYYDIA-VEDLIVIYDDLDLPVGKIRLRTKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I HVLG FS E+ ++ I A ++ A+ V
Sbjct: 120 HLKTQEFNRIRVGVDRP-RNGEVIHHVLGEFSKAEQPTIIEAIQTSADAVEAFAEHSFVE 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 VMNKFN 184
>gi|312194511|ref|YP_004014572.1| peptidyl-tRNA hydrolase [Frankia sp. EuI1c]
gi|311225847|gb|ADP78702.1| peptidyl-tRNA hydrolase [Frankia sp. EuI1c]
Length = 195
Score = 249 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 110/187 (58%), Gaps = 2/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG EY RHN GF+ +D + H K A+ ++ +L G+ +L +P
Sbjct: 9 WLVVGLGNPGPEYASTRHNAGFLVVDLLAERHGARLRSHKARADAAQLRLAGVSAVLARP 68
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+T+MN+SG + + +F+K+ + +V+HD+LD+ FG +RLK GGGD GHNGL+SI+
Sbjct: 69 RTYMNVSGPPVAALRSFFKV-DPARVIVVHDELDIPFGAVRLKRGGGDNGHNGLRSITSS 127
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y R+R GIGRPP VL +F+ PER L ++D A ++ L
Sbjct: 128 LGTRDYLRVRFGIGRPPGRMDPADFVLRDFAVPERKELPFLVDRAADAVEALVAEGLEPA 187
Query: 181 LNHIVSV 187
N ++
Sbjct: 188 QNRFHAL 194
>gi|209965202|ref|YP_002298117.1| peptidyl-tRNA hydrolase [Rhodospirillum centenum SW]
gi|226709063|sp|B6ITK3|PTH_RHOCS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|209958668|gb|ACI99304.1| peptidyl-tRNA hydrolase pth [Rhodospirillum centenum SW]
Length = 227
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 83/189 (43%), Positives = 116/189 (61%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY RHN+GFM +D +H + F WK++F +EG + G + +L+K
Sbjct: 1 MRLVVGLGNPGPEYERQRHNVGFMAVDLLHRRYGFGPWKRRFQGLTAEGSVAGEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQ+ E M FYK+ + LV HD+LDL G +R+K GGG GHNGL+S+ +
Sbjct: 61 PATFMNLSGQAAGEAMRFYKITP-DQVLVFHDELDLPPGRVRVKRGGGHGGHNGLRSLDD 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
GK+Y R+RIGIG P + VL NF+ E +L P++D + PLL E +
Sbjct: 120 HVGKDYWRIRIGIGHPGSKERVTGWVLSNFAKAEEQWLEPLLDALVAEAPLLVAGEPEKY 179
Query: 181 LNHIVSVRK 189
+ I + +
Sbjct: 180 ASRIALLTQ 188
>gi|154684572|ref|YP_001419733.1| peptidyl-tRNA hydrolase [Bacillus amyloliquefaciens FZB42]
gi|166199305|sp|A7Z0H6|PTH_BACA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|154350423|gb|ABS72502.1| SpoVC [Bacillus amyloliquefaciens FZB42]
Length = 188
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG Y RHN+GFM ID + K KF+ G + G + +L+K
Sbjct: 1 MLVIAGLGNPGKTYENTRHNVGFMAIDELSKEWNIELNKTKFNGLYGMGFVSGKKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ L ++++Y + E+ VI+DDLDL G +RL+T G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECLRPILDYYD-ADHEDLKVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQ 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+RIGIGRP + ++ +VLG F+ E + + ++ + +
Sbjct: 120 HLGTPEFDRVRIGIGRPVNGMKVVDYVLGAFTKEEAPHINDAVSKTVKACEASLTKPFLE 179
Query: 180 FLNHIVS 186
+N +
Sbjct: 180 VMNEFNA 186
>gi|89892925|ref|YP_516412.1| peptidyl-tRNA hydrolase [Desulfitobacterium hafniense Y51]
gi|89332373|dbj|BAE81968.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 196
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 72/183 (39%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y E RHN GF+ +D + ++ KF ++E + G + L+K
Sbjct: 12 MKLIAGLGNPGGQYAETRHNAGFLLLDCLAEE-LKLDFRPKFQGLVAETMMGGEKVYLLK 70
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E+ FYK+ ++ +V++DD+DL G LRL++ G GHNG+KS
Sbjct: 71 PQTFMNLSGRSIRELAQFYKIAP-KDIMVVYDDMDLPIGRLRLRSSGSAGGHNGIKSTIA 129
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G ++ RL++GIGRP R+VL +F+ E L I+D +++ L AK
Sbjct: 130 ELGTEDFWRLKVGIGRPTAGWDSARYVLASFTKEELPVLEEILDKGIKAVTLWAKEGGDK 189
Query: 180 FLN 182
+N
Sbjct: 190 AMN 192
>gi|255017252|ref|ZP_05289378.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL F2-515]
Length = 186
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GF+ +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFVVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+G+ RP +I +VLG+F E+ ++ I A ++ A+ +
Sbjct: 120 HVKTQEFNRIRVGVSRPL-KXEVINYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIE 178
Query: 180 FLNHIVS 186
+N
Sbjct: 179 VMNKYNQ 185
>gi|75676695|ref|YP_319116.1| peptidyl-tRNA hydrolase [Nitrobacter winogradskyi Nb-255]
gi|119390971|sp|Q3SPM7|PTH_NITWN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|74421565|gb|ABA05764.1| peptidyl-tRNA hydrolase [Nitrobacter winogradskyi Nb-255]
Length = 202
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 78/185 (42%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F W+++F E SEG LD R I++K
Sbjct: 1 MRLFVGLGNPGTKYQGNRHNIGFMVVDEIARRHGFAPWRRRFQGEASEGTLDRERVIVLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ + + F+KL + +V HD+++L +R+K GGG AGHNGL+SIS
Sbjct: 61 PATYMNNSGNAVQDAVQFFKLKEA-DVVVFHDEIELPPAKVRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+R+G+G P + HVL +F+ ER ++ ++D +A + LL +D +F
Sbjct: 120 HIGNDYRRVRLGVGHPGVKELVHAHVLNDFARSERSWVEALVDTVAENAALLVAAKDSAF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNKVH 184
>gi|290475208|ref|YP_003468094.1| peptidyl-tRNA hydrolase [Xenorhabdus bovienii SS-2004]
gi|289174527|emb|CBJ81321.1| peptidyl-tRNA hydrolase [Xenorhabdus bovienii SS-2004]
Length = 196
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H P + KF + L+G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWFVDLLAQRHRQPLKEESKFFGYTARINLNGQDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+L + FY++ + LV HD+LDL G ++K GG + GHNGLK I
Sbjct: 65 PTTFMNLSGKSVLALAGFYRI-QPDEILVAHDELDLPPGVAKMKLGGSNGGHNGLKDIQN 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K N + RLRIGIG P D ++ VLG + E+ + ID +L K
Sbjct: 124 KFSNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPASEQKLIDEAIDEALSCTDILMKEGMN 183
Query: 179 SFLNHIVSVR 188
+N + + R
Sbjct: 184 KAINRLHAFR 193
>gi|220922770|ref|YP_002498072.1| peptidyl-tRNA hydrolase [Methylobacterium nodulans ORS 2060]
gi|254783877|sp|B8IFN4|PTH_METNO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219947377|gb|ACL57769.1| peptidyl-tRNA hydrolase [Methylobacterium nodulans ORS 2060]
Length = 203
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 84/185 (45%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIGFM +D I H W++KF E SE L R +L+K
Sbjct: 1 MRLFVGLGNPGSRYAGNRHNIGFMALDAIARRHRAAPWRRKFQGEASEAVLGSERVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MN SG+++ E FYK+ L++ +V HD+LDL +R+K GGG+AGHNGL+SI+
Sbjct: 61 PETYMNESGRAVAEAQRFYKIA-LDDVVVFHDELDLGPTKVRVKRGGGNAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG Y R+R+GIG P D A + +VL +F+ ER ++ + D +A LLA ED +F
Sbjct: 120 LCGNEYWRVRLGIGHPGDKALVHAYVLNDFAKAERPWVDDLCDALADHAALLAAGEDAAF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNKVH 184
>gi|296446565|ref|ZP_06888507.1| peptidyl-tRNA hydrolase [Methylosinus trichosporium OB3b]
gi|296255919|gb|EFH03004.1| peptidyl-tRNA hydrolase [Methylosinus trichosporium OB3b]
Length = 201
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 78/185 (42%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y +NRHNIGFM ++ I H F + +F + EG + G R + +
Sbjct: 1 MLLLVGLGNPGRAYAKNRHNIGFMAVEAIADAHGFSPPRTRFQGLVREGTIAGERVLALL 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ E + F+K+ + + +V+HD+LDL R+KTGGG AGHNGL+SI
Sbjct: 61 PQTYMNESGRAVGEALRFHKM-TIGDVVVLHDELDLPPAKCRVKTGGGAAGHNGLRSIGA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +KRLR+GIG P D A + +VL +F+ E ++ + D +A + L+AKR+D
Sbjct: 120 HIGAEFKRLRLGIGHPGDKALVHSYVLNDFAKSEEPWVRALCDALADNAALIAKRDDAGL 179
Query: 181 LNHIV 185
N I
Sbjct: 180 QNKIH 184
>gi|168187037|ref|ZP_02621672.1| peptidyl-tRNA hydrolase [Clostridium botulinum C str. Eklund]
gi|169295068|gb|EDS77201.1| peptidyl-tRNA hydrolase [Clostridium botulinum C str. Eklund]
Length = 190
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 110/189 (58%), Gaps = 3/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG EY RHN+GF +D I + KKKF G + G + IL+K
Sbjct: 1 MFLIVGLGNPGKEYEHTRHNVGFDIVDVISEKYNIDLNKKKFKGMYGSGIIAGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ E M+FYK+PN EN +VI+DD+ L+ G +R++ G GHNG+K+I
Sbjct: 61 PLTYMNLSGESVKEAMDFYKIPN-ENVIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G+P ++ HVLG F+ + L + + + + ++
Sbjct: 120 HFGSDVFPRIKVGVGQPIQK-DLVSHVLGKFNIEDVEILSKVFEAANDATESIIEKGTAE 178
Query: 180 FLNHIVSVR 188
+N +
Sbjct: 179 AMNKFNGFK 187
>gi|241762454|ref|ZP_04760531.1| Aminoacyl-tRNA hydrolase [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241372956|gb|EER62623.1| Aminoacyl-tRNA hydrolase [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 189
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 83/189 (43%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I AGLGNPG Y NRHN+GFM +D + S F WK+ F +IS GQ+D R +L+K
Sbjct: 1 MQIWAGLGNPGSSYALNRHNVGFMAVDMLASERSFAPWKRAFQGQISLGQIDQERILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E M FYKL E+ V HD+LD+ +++K GGG AGHNGL+S
Sbjct: 61 PATFMNESGRAIGEAMRFYKLTP-EDVTVFHDELDIAPMRVKVKKGGGAAGHNGLRSTIA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G++++R+R+GIG P + + + +VLGNF+ E L +++ I +++P LA +D F
Sbjct: 120 HIGQSFRRVRLGIGHPGEKSRVHDYVLGNFAKSETDSLADMLNAINQAIPWLANDDDARF 179
Query: 181 LNHIVSVRK 189
++ I R+
Sbjct: 180 MSEIALRRQ 188
>gi|295702291|ref|YP_003595366.1| peptidyl-tRNA hydrolase [Bacillus megaterium DSM 319]
gi|294799950|gb|ADF37016.1| peptidyl-tRNA hydrolase [Bacillus megaterium DSM 319]
Length = 185
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID+I K KF+ G + G + IL+K
Sbjct: 1 MKLIVGLGNPGKEYDRTRHNIGFMAIDKIAEQFMISLDKTKFNGIYGTGIIKGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M+++ + ++++ LVI+DDLDL G +RL+T G GHNG+KSI +
Sbjct: 61 PLTYMNLSGESIRPLMDYFDI-DVKDLLVIYDDLDLPCGKVRLRTKGSPGGHNGIKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+RIGI RP + ++ +VLG F+ E + + + + +
Sbjct: 120 HLKTQEFNRIRIGIDRPKNGMKVVDYVLGRFTEDEMVHMEEAMKTSIHASEDFLGKPFLE 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 VMNRYN 185
>gi|254419393|ref|ZP_05033117.1| peptidyl-tRNA hydrolase [Brevundimonas sp. BAL3]
gi|196185570|gb|EDX80546.1| peptidyl-tRNA hydrolase [Brevundimonas sp. BAL3]
Length = 206
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 76/191 (39%), Positives = 116/191 (60%), Gaps = 5/191 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG----LRT 56
M I+AGLGNPG +Y +NRHNIGFM D I F + KF + +SEG +D ++
Sbjct: 1 MIIIAGLGNPGAKYEKNRHNIGFMAADEIARRWRFGPERAKFQSIVSEGLVDTADGPVKV 60
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L+KPQT+MN SG+++ E FYK+ E +V HD++DL G R+KTGGG AG NG++
Sbjct: 61 LLMKPQTYMNESGRAVGEAARFYKIKPSE-IIVFHDEIDLAPGRFRMKTGGGAAGQNGVR 119
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
S+ G ++R R+GIG P + ++ HVLG+F E+ +L ++ A +LP +
Sbjct: 120 SLISHLGPEFRRARMGIGHPGEKEMVMPHVLGDFHKAEQPWLDALLQACADALPFAVAGD 179
Query: 177 DVSFLNHIVSV 187
D + ++ +
Sbjct: 180 DERYQGEVMRL 190
>gi|229824546|ref|ZP_04450615.1| hypothetical protein GCWU000282_01890 [Catonella morbi ATCC 51271]
gi|229785917|gb|EEP22031.1| hypothetical protein GCWU000282_01890 [Catonella morbi ATCC 51271]
Length = 186
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 72/187 (38%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF ID + +KF A+ + ++ + +L+K
Sbjct: 1 MKLIVGLGNPGDKYQGTRHNVGFDVIDALARQEGLKLTDQKFRADYTIWRVGDEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++L +M++Y + + + +V++DDLDL+ G LRL+ G GHNG+KSI E
Sbjct: 61 PYTFMNLSGEAVLPLMSYYNI-SPDELVVVYDDLDLEPGKLRLRQSGSAGGHNGVKSIIE 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G +++KR++IGIGRP ++ HVL F + +R + ID L AK E V
Sbjct: 120 MLGTQDFKRVKIGIGRPQYGRKVVDHVLQRFDTDDRALIEQKIDQTTDLLRAWAKGETFV 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 QLMNQYN 186
>gi|190892771|ref|YP_001979313.1| peptidyl-tRNA hydrolase protein [Rhizobium etli CIAT 652]
gi|238692515|sp|B3PV10|PTH_RHIE6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|190698050|gb|ACE92135.1| peptidyl-tRNA hydrolase protein [Rhizobium etli CIAT 652]
Length = 243
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 92/185 (49%), Positives = 125/185 (67%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH F W KKF AEI+EG+L G + +LIK
Sbjct: 1 MLIIAGLGNPGAKYAGNRHNIGFMAVDAIHRRQSFSPWSKKFKAEIAEGELGGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E M FYKL + + I+D+LDL G RLKTGGG GHNG++S+
Sbjct: 61 PQTYMNLSGEAVGEAMRFYKL-QPADLVAIYDELDLSPGKARLKTGGGHGGHNGIRSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P + HVLG+F+ + +L P+++ +A + +L + ED
Sbjct: 120 HCGKEYRRLRLGIGHPGIKEMVQNHVLGDFAKADSDWLEPLLETLADNAEMLVRNEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|260574078|ref|ZP_05842083.1| peptidyl-tRNA hydrolase [Rhodobacter sp. SW2]
gi|259023544|gb|EEW26835.1| peptidyl-tRNA hydrolase [Rhodobacter sp. SW2]
Length = 235
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 84/185 (45%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + AGLGNPG +Y NRHNIGFM +DRI + H F W+ +F +EG L G + +L+K
Sbjct: 1 MKLFAGLGNPGAKYAGNRHNIGFMAVDRIAADHGFGPWRSRFQGLAAEGSLGGEKLVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E + FYKL + +V HD+LDL G R+K GGG AGHNGL+SI
Sbjct: 61 PATFMNLSGQSVAEALRFYKLTPA-DLVVFHDELDLAPGKARVKQGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ Y R+R+GIG P + +VL +F+ + +L ++ I+ LLA + F
Sbjct: 120 HIGEAYGRVRLGIGHPGHKDAVAAYVLNDFAKADADWLEDLLHGISDGAALLAAGDGARF 179
Query: 181 LNHIV 185
LN +
Sbjct: 180 LNALA 184
>gi|313895642|ref|ZP_07829198.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312975768|gb|EFR41227.1| aminoacyl-tRNA hydrolase [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 195
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 114/190 (60%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG EY + +HN+GF+ +D + AWKK F + ++E ++ + L+K
Sbjct: 1 MKIIAGLGNPGAEYTQTKHNVGFILVDALAQRLGVSAWKKAFSSLVAEVRIGSEKVFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG +L ++++YK+ + ++ +V+HDD+D+ G +R++T GG GHNG+KSI
Sbjct: 61 PQTYMNDSGSALGPMLSYYKI-DTKDLIVVHDDMDIPAGAVRIRTKGGSGGHNGIKSIIS 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+RIGIGRPP +I HVL FS+ + + I + ++ +
Sbjct: 120 HVGTEEFPRVRIGIGRPPVGWTVINHVLAPFSTDDASLVGEAIGYLLPAVEYIVTDGVDM 179
Query: 180 FLNHIVSVRK 189
+N +K
Sbjct: 180 AMNRFNPRKK 189
>gi|56552807|ref|YP_163646.1| peptidyl-tRNA hydrolase [Zymomonas mobilis subsp. mobilis ZM4]
gi|68052886|sp|Q5NL75|PTH_ZYMMO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56544381|gb|AAV90535.1| Aminoacyl-tRNA hydrolase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 189
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 82/189 (43%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I AGLGNPG Y NRHN+GFM +D + S F WK+ F ++S GQ+D R +L+K
Sbjct: 1 MQIWAGLGNPGSSYALNRHNVGFMAVDMLASEKSFAPWKRAFQGQVSLGQIDQERILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E M FYKL E+ V HD+LD+ +++K GGG AGHNGL+S
Sbjct: 61 PATFMNESGRAIGEAMRFYKLAP-EDVTVFHDELDIAPMRVKVKKGGGAAGHNGLRSTIA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G++++R+R+GIG P + + + +VLGNF+ E L +++ I +++P LA +D F
Sbjct: 120 HIGQSFRRVRLGIGHPGEKSRVHDYVLGNFAKSETDSLADMLNAINQAIPWLANDDDARF 179
Query: 181 LNHIVSVRK 189
++ I R+
Sbjct: 180 MSEIALRRQ 188
>gi|319934922|ref|ZP_08009367.1| peptidyl-tRNA hydrolase [Coprobacillus sp. 29_1]
gi|319810299|gb|EFW06661.1| peptidyl-tRNA hydrolase [Coprobacillus sp. 29_1]
Length = 184
Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 64/183 (34%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GFM +DR+ KF E + + G IL+K
Sbjct: 1 MKLIVGLGNPGKDYENTRHNVGFMVMDRLSDVMNVSISTTKFKGEYVKFKYHGEDVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ +VM+++K+ ++E+ LV++DD+D+ G LRL+ G GHNG+KSI
Sbjct: 61 PMTYMNNSGESVRQVMDYFKI-DVEDLLVVYDDMDMPVGKLRLRQSGSAGGHNGVKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++++R+R+GI + P ++ +VLG F E+ + +++ +++ + V+
Sbjct: 120 HVGTQSFQRIRVGIDKHP-RIKVVDYVLGRFQKDEQPLIDQGVEDAVKAIETYLNKGFVA 178
Query: 180 FLN 182
+N
Sbjct: 179 AMN 181
>gi|172056087|ref|YP_001812547.1| peptidyl-tRNA hydrolase [Exiguobacterium sibiricum 255-15]
gi|229576703|sp|B1YGP7|PTH_EXIS2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|171988608|gb|ACB59530.1| Aminoacyl-tRNA hydrolase [Exiguobacterium sibiricum 255-15]
Length = 185
Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y RHNIGF+ ID + H + KF A G + G R +L+K
Sbjct: 1 MKCIVGLGNPGAKYTNTRHNIGFLAIDALAKEHGIKLTESKFKAVFGTGMIKGERVVLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ +++FYK+ +E+ LVI+DDLDL +RL++ G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGEAVRPLLDFYKIA-VEDVLVIYDDLDLPLEKMRLRSKGSAGGHNGVKSLIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ KRL++G+GRPP +I VL F+ E+ L ++ + ++
Sbjct: 120 HLGTQDIKRLKLGVGRPPAPIQVIDWVLMPFAKSEQTTLQHVLSDSVNIATDFIDTPFLA 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 LMNRYN 185
>gi|291522022|emb|CBK80315.1| peptidyl-tRNA hydrolase [Coprococcus catus GD/7]
Length = 190
Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 111/190 (58%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP +Y RHN+GF IDRI + + +KK A G ++G + IL K
Sbjct: 1 MHLIVGLGNPTKQYEGTRHNVGFETIDRIAAENQIRVEEKKHKALYGSGYIEGEKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E+ ++YK+P EN +VI+DD+ LD G LR++ G GHNG+K+I
Sbjct: 61 PQTFMNLSGESVRELSDYYKIP-AENIIVIYDDISLDVGQLRIREKGSAGGHNGIKNIIL 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+++G+G P + +VLG +S+ +R + A ++ ++ +
Sbjct: 120 HLGTEVFPRIKVGVGEKPKGWDLADYVLGRYSAEDRKIIDEAQKEAAEAVKMMVMDDVRG 179
Query: 180 FLNHIVSVRK 189
+N + +K
Sbjct: 180 AMNRYNTKKK 189
>gi|167629343|ref|YP_001679842.1| peptidyl-tRNA hydrolase [Heliobacterium modesticaldum Ice1]
gi|167592083|gb|ABZ83831.1| peptidyl-tRNA hydrolase [Heliobacterium modesticaldum Ice1]
Length = 225
Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 73/184 (39%), Positives = 108/184 (58%), Gaps = 2/184 (1%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
+ GLGNPG +Y RHNIGFM +DR+ ++ +F SE +++G + +L+KPQT
Sbjct: 31 IVGLGNPGLQYARTRHNIGFMVVDRLAEAWGAEGFRDRFQGLCSEARVEGEKVLLLKPQT 90
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
+MNLSGQS+ + FYKL E+ LVI+DD+DL G LR + GG GHNG+KSI G
Sbjct: 91 YMNLSGQSVAALAVFYKLLP-EDILVIYDDMDLKLGRLRARAKGGSGGHNGMKSIIGLLG 149
Query: 124 KN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
+ RL++GIGRP D HVL +F+ E+ + ++D + L + + +N
Sbjct: 150 TEAFPRLKMGIGRPADRRLAAAHVLESFTEEEQETVRAMLDQGREAAALWVDKGIIEVMN 209
Query: 183 HIVS 186
+
Sbjct: 210 RFNA 213
>gi|87200132|ref|YP_497389.1| peptidyl-tRNA hydrolase [Novosphingobium aromaticivorans DSM 12444]
gi|119390972|sp|Q2G6G8|PTH_NOVAD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|87135813|gb|ABD26555.1| peptidyl-tRNA hydrolase [Novosphingobium aromaticivorans DSM 12444]
Length = 191
Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 82/185 (44%), Positives = 119/185 (64%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +RHN+GFM +D I H F +KKF + EG++ + +L+K
Sbjct: 1 MQLWVGLGNPGPQYALHRHNVGFMALDTIAEVHNFGPVQKKFQGWLQEGRIGTEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E M FYKL ++ +V HD+LDL +++K GGG AGHNGL+SI +
Sbjct: 61 PATFMNESGRSVGEAMRFYKL-GMDALVVFHDELDLAPFKVKVKQGGGTAGHNGLRSIDK 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ R+R+GIG P + HVLGNF+ E+ L+ ++ IA LLAK ++V F
Sbjct: 120 HLGPDFLRVRLGIGHPGHKDRVTGHVLGNFAKSEQDDLVDMLGAIASEAALLAKGDNVLF 179
Query: 181 LNHIV 185
+N+I
Sbjct: 180 MNNIA 184
>gi|253580890|ref|ZP_04858152.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847732|gb|EES75700.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 193
Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 108/186 (58%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGNPG +Y RHN+GF +DR+ + P KF+A + + G + IL+K
Sbjct: 1 MYLVVGLGNPGKQYEATRHNMGFDTVDRLVEDYNVPQGGVKFNAMYGKTMIGGEKVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +FMNLSG + E+ N++K+ +VI+DD+DL+ G LR++ G GHNG+K I
Sbjct: 61 PLSFMNLSGGPVREMANYFKIDPESELIVIYDDIDLEPGQLRIRKQGSAGGHNGIKDIIR 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + R+++G+G P + HVLG FS+ +R + I A+++ ++ + +
Sbjct: 121 QLGTEKFLRIKVGVGAKPKGWDLADHVLGRFSTEDRKLVDEAIAKAAKAVDIIISQGTDA 180
Query: 180 FLNHIV 185
+N
Sbjct: 181 AMNEYN 186
>gi|326202451|ref|ZP_08192320.1| peptidyl-tRNA hydrolase [Clostridium papyrosolvens DSM 2782]
gi|325987569|gb|EGD48396.1| peptidyl-tRNA hydrolase [Clostridium papyrosolvens DSM 2782]
Length = 189
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 72/185 (38%), Positives = 117/185 (63%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG ++ RHN+GF ID I + + + F A EG+++G+RTIL+KP
Sbjct: 5 YLLVGLGNPGTKFENTRHNVGFDTIDYISAKYNIKLSRIGFKAVYGEGEIEGVRTILVKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ E++++YKLP +E +VI+DD+DL+ G +R++ G HNG+KSI +
Sbjct: 65 QTFMNLSGESVREIVDWYKLP-VERLVVIYDDIDLEPGKIRVRPKGSSGTHNGMKSIIYQ 123
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ + R+RIGIGR P+ + +VL FS +R + ++ A++ + AK
Sbjct: 124 LQDDRFPRVRIGIGRAPEKWDLADYVLSKFSKEDRQVIDQSVEKAAQAAIMTAKSGPEKA 183
Query: 181 LNHIV 185
+N+
Sbjct: 184 MNNFN 188
>gi|153811641|ref|ZP_01964309.1| hypothetical protein RUMOBE_02033 [Ruminococcus obeum ATCC 29174]
gi|149832382|gb|EDM87467.1| hypothetical protein RUMOBE_02033 [Ruminococcus obeum ATCC 29174]
Length = 192
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 62/186 (33%), Positives = 109/186 (58%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG +Y RHN+GF ID++ + P KF+A +G+++G IL+K
Sbjct: 1 MYLIVGLGNPGRQYEATRHNMGFDVIDKLVEEYNVPQSGVKFNAMYGKGRIEGQPVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P ++MNLSG + ++ N++K+ +VI+DD+DL+ G LR++ G GHNG+K I +
Sbjct: 61 PLSYMNLSGGPVRDMANYFKIDPETEMIVIYDDIDLEPGQLRIRKKGSAGGHNGIKHIIQ 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + + R+++G+G P + HVLG F S ER + + +++ ++ +
Sbjct: 121 QLGTQTFVRIKVGVGAKPKGWDLADHVLGRFGSNERKLVEEAQERACKAVEMILADSVDA 180
Query: 180 FLNHIV 185
+N
Sbjct: 181 AMNQFN 186
>gi|158312638|ref|YP_001505146.1| peptidyl-tRNA hydrolase [Frankia sp. EAN1pec]
gi|158108043|gb|ABW10240.1| Aminoacyl-tRNA hydrolase [Frankia sp. EAN1pec]
Length = 195
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 77/186 (41%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG Y NRHN+GFM +D + + AEI + +L G +L +P
Sbjct: 10 WLVVGLGNPGASYAGNRHNVGFMVVDLLAERTGARLRSHRSRAEIDQVRLAGRSVVLARP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+TFMN+SG + V FYK+ ++ +V+HD+LD+ F +RLK GGGD GHNGL+SI+
Sbjct: 70 RTFMNVSGPPVAAVRAFYKI-DVSRVIVVHDELDIPFDAIRLKRGGGDNGHNGLRSITSS 128
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y R+R+GIGRPP VL +FS ER L I+DN A ++ L + E +
Sbjct: 129 LGSRDYLRVRVGIGRPPGRMDPADFVLRDFSPVERKALPLIVDNAADAVESLLQEELAAA 188
Query: 181 LNHIVS 186
N +
Sbjct: 189 QNRFHA 194
>gi|170740630|ref|YP_001769285.1| peptidyl-tRNA hydrolase [Methylobacterium sp. 4-46]
gi|238688063|sp|B0UGY2|PTH_METS4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|168194904|gb|ACA16851.1| Aminoacyl-tRNA hydrolase [Methylobacterium sp. 4-46]
Length = 203
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 83/185 (44%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIGFM +D + H W++KF E SE + R +L+K
Sbjct: 1 MRLFVGLGNPGARYAANRHNIGFMALDAVARRHRAAPWRRKFQGEASEAVIGTERVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MN SG+++ E FYK+ L++ +V HD+LDL +R+K GGG+AGHNGL+SI+
Sbjct: 61 PETYMNESGRAVAEAQRFYKIA-LDDVVVFHDELDLAPAKVRVKKGGGNAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+CG Y R+R+GIG P D A + +VL +F+ ER ++ + D +A LLA ED +F
Sbjct: 120 QCGNEYWRVRLGIGHPGDKALVHAYVLNDFAKAERPWVDDLCDALADHAALLAAGEDANF 179
Query: 181 LNHIV 185
N I
Sbjct: 180 QNRIH 184
>gi|58743494|gb|AAW81735.1| Putative Putative Pepidyl-tRNA hydrolase family protein [Brassica
oleracea]
Length = 291
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 110/193 (56%), Gaps = 6/193 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D + F A +G + + +L KP
Sbjct: 98 WLIVGLGNPGKKYQGTRHNVGFEMVDALAEAEGISMNTVNFKALFGKGVIGNIPIMLAKP 157
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+S+ ++++FYK+P L+ LVI+DDLDL FG LRL GG GHNG++SI ++
Sbjct: 158 QTFMNASGESVGQIVSFYKIP-LKQVLVIYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 216
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED-- 177
+++ RLRIGIGRPP +VL F+ E+ L ++ ++
Sbjct: 217 LKGSRDFPRLRIGIGRPPGKMDTANYVLRQFNKQEQEELDYTFQTGLEAIRIMLLEGFNK 276
Query: 178 -VSFLNHIVSVRK 189
+F+N S+++
Sbjct: 277 SATFVNTQKSMQQ 289
>gi|261343915|ref|ZP_05971560.1| aminoacyl-tRNA hydrolase [Providencia rustigianii DSM 4541]
gi|282568301|gb|EFB73836.1| aminoacyl-tRNA hydrolase [Providencia rustigianii DSM 4541]
Length = 196
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + + G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLARRHNQSLKEESKFFGYTARINIGGDDIRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ V NFY++ NL+ LV HD+LDL G ++K GG + GHNGLK I
Sbjct: 65 PTTFMNLSGKSVAAVANFYRI-NLDEILVAHDELDLPPGVAKMKLGGSNGGHNGLKDIQS 123
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K N+ RLRIGIG P D ++ VLG E+ + ID R +L
Sbjct: 124 KFANNPNFYRLRIGIGHPGDKNKVVGFVLGKPPMSEQKLIDDAIDEALRCTEILLSDGMD 183
Query: 179 SFLNHIVSVR 188
+N + +
Sbjct: 184 KAINRLHGFK 193
>gi|297582392|ref|YP_003698172.1| peptidyl-tRNA hydrolase [Bacillus selenitireducens MLS10]
gi|297140849|gb|ADH97606.1| peptidyl-tRNA hydrolase [Bacillus selenitireducens MLS10]
Length = 191
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y RHN+GF ID + P + KF + L+K
Sbjct: 1 MKLAVGLGNPGKAYERTRHNVGFDVIDHVSDQLGIPLDQNKFKGVFGTHRTPKGPFTLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ ++ ++Y +P E+ LVI+DDLDL G +RL+T GG GHNG++S
Sbjct: 61 PMTFMNLSGESIRQIADYYDIPP-EDILVIYDDLDLPPGKIRLRTKGGHGGHNGIRSTLS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ R+RIGIGRP + HVLG FS +R + + A+++ +
Sbjct: 120 HLNTESFNRIRIGIGRPEPGTKVTDHVLGRFSPDDRELVDEAVRQAAKAVEAWMDDSFIL 179
Query: 180 FLNHIVS 186
+N S
Sbjct: 180 VMNDFNS 186
>gi|325110026|ref|YP_004271094.1| peptidyl-tRNA hydrolase [Planctomyces brasiliensis DSM 5305]
gi|324970294|gb|ADY61072.1| peptidyl-tRNA hydrolase [Planctomyces brasiliensis DSM 5305]
Length = 192
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF + + + AEI+E + G +T+L+
Sbjct: 1 MKVIVGLGNPGGKYEGTRHNVGFEVLYELARKWQASGVTRAHEAEIAEVHVAGEKTLLVA 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ ++ FYK+ +LE+ LVI DDL+L G LRL+ G G G++ I
Sbjct: 61 PQTFMNLSGRSVGSLVKFYKV-DLEDLLVISDDLNLPCGQLRLRASGSSGGQKGIRDIIA 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ RLR+GIGRPP + VL F + ER + + + ++ L + +
Sbjct: 120 HLGTEDFPRLRVGIGRPPGRMDVSTFVLKRFLAEERETMDLTVRDAVDAVELWLREGVTA 179
Query: 180 FLNHIVS 186
+N + +
Sbjct: 180 AMNKVNT 186
>gi|148381480|ref|YP_001256021.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 3502]
gi|153931979|ref|YP_001385855.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 19397]
gi|153936610|ref|YP_001389262.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. Hall]
gi|166199325|sp|A7FPJ7|PTH_CLOB1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199326|sp|A5I7R5|PTH_CLOBH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148290964|emb|CAL85100.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 3502]
gi|152928023|gb|ABS33523.1| peptidyl-tRNA hydrolase [Clostridium botulinum A str. ATCC 19397]
gi|152932524|gb|ABS38023.1| aminoacyl-tRNA hydrolase [Clostridium botulinum A str. Hall]
Length = 189
Score = 247 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 70/189 (37%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGN G EY + RHNIGF +D I + ++KF EG++ + IL+K
Sbjct: 1 MYLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NFYK+ + EN +VI+DD+ +D G LR+++ G GHNG+K+I +
Sbjct: 61 PSTYMNLSGESVIEAANFYKI-DKENIIVIYDDMSIDIGKLRVRSKGSAGGHNGIKNIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+GIG+P +++ +VLG FS ER + ++ A++ + +
Sbjct: 120 HLNSDIFPRVRVGIGQP--DENVVNYVLGKFSKDEREIIEKVLAMSAKACISIVEDGVTE 177
Query: 180 FLNHIVSVR 188
+N V+
Sbjct: 178 AMNKYNGVK 186
>gi|323485662|ref|ZP_08091000.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14163]
gi|323401012|gb|EGA93372.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14163]
Length = 202
Score = 247 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG EY +RHN+GFM +D + + +K A I +G ++G + IL+K
Sbjct: 1 MYIIAGLGNPGKEYAGSRHNVGFMTLDELADRYNIDVREKAHKALIGKGMIEGNKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ VM++YK E ++VI+DD+ L+ G +R++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESIRSVMDYYKTEPSE-FIVIYDDISLEPGQIRIRKKGSAGGHNGIKNIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+RIG+G P + +VLG+FS E+ + + A + + +
Sbjct: 120 HLGTQEFPRIRIGVGEKPARMDLADYVLGHFSKEEKERMEQAFKDGAAAAVAMMNDGVDT 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNRFN 185
>gi|218290673|ref|ZP_03494764.1| Aminoacyl-tRNA hydrolase [Alicyclobacillus acidocaldarius LAA1]
gi|218239338|gb|EED06536.1| Aminoacyl-tRNA hydrolase [Alicyclobacillus acidocaldarius LAA1]
Length = 191
Score = 247 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 1/188 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GFM ID + + FHA + + + G + +L+K
Sbjct: 1 MKVIVGLGNPGREYERTRHNAGFMAIDILAEKLAARVDQADFHALVGDARYAGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN+SG S+ E++ +Y++ E+ +V++DD+D G +RLK G GHNG+KSI E
Sbjct: 61 PHTYMNVSGLSVGEIVRYYRIDPAEDLMVLYDDMDFPPGVVRLKVQGSAGGHNGIKSIIE 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+RIGIGRPP A I+ +VLG FS E + ++ A + +R
Sbjct: 121 SLGTEKFGRVRIGIGRPPKGAPIVPYVLGAFSREEEPRVRRGLETAAEAALYAVERGFAE 180
Query: 180 FLNHIVSV 187
+ +
Sbjct: 181 AMTRYNAA 188
>gi|218670312|ref|ZP_03519983.1| peptidyl-tRNA hydrolase [Rhizobium etli GR56]
Length = 243
Score = 247 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 92/185 (49%), Positives = 126/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH H F W KKF EI+EG+L G + +LIK
Sbjct: 1 MLIIAGLGNPGAKYAGNRHNIGFMAVDAIHRRHSFSPWSKKFRGEIAEGELAGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E M FYKL + + I+D+LDL G RLKTGGG GHNG++S+
Sbjct: 61 PQTYMNLSGEAVGEAMRFYKL-QPADLVAIYDELDLPAGKARLKTGGGHGGHNGIRSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P + HVLG+F+ ++ ++ P++D +A + +L + ED
Sbjct: 120 HCGKEYRRLRLGIGHPGVKEMVQSHVLGDFTRADKAWVEPLLDTLADNADMLVRNEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|159185111|ref|NP_355187.2| peptidyl-tRNA hydrolase [Agrobacterium tumefaciens str. C58]
gi|22095994|sp|Q8UD97|PTH_AGRT5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|159140382|gb|AAK87972.2| peptidyl tRNA hydrolase [Agrobacterium tumefaciens str. C58]
Length = 238
Score = 247 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 92/185 (49%), Positives = 124/185 (67%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D + F W KKF AEISEG++ G + +L+K
Sbjct: 1 MKIIAGLGNPGAQYAGNRHNIGFMAVDALQRLPSFAPWSKKFKAEISEGEIGGEKVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ E M F+KL + + IHD+LDL G R+K GGG GHNGLKS+
Sbjct: 61 PLTYMNLSGESVGEAMRFFKLTPA-DIIAIHDELDLLAGRTRIKIGGGHGGHNGLKSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P D + HVLG+F+ +R +L P++D IA + +L K +D
Sbjct: 120 HCGKEYRRLRLGIGHPGDKERVHGHVLGDFAKSDRVWLDPLLDAIADNAAMLVKGDDSQL 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNKLA 184
>gi|297734182|emb|CBI15429.3| unnamed protein product [Vitis vinifera]
Length = 307
Score = 247 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 106/193 (54%), Gaps = 6/193 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D I F + +G + + +L KP
Sbjct: 113 WLLVGLGNPGKKYNGTRHNVGFEMVDAIAEAEGISISSVSFKSLFGKGFIGNVPVMLAKP 172
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN+SG+S+ ++++YK+P L+ LVI DDLDL F LRL GG GHNG++S+ +
Sbjct: 173 QTFMNVSGESVGAIVSYYKIP-LKQVLVIFDDLDLPFSKLRLLPKGGHGGHNGMRSVIDH 231
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED-- 177
+++ RLRIGIGRPP VL FS ER L N ++ +L
Sbjct: 232 FKGSRDFPRLRIGIGRPPGKMDTANFVLSPFSKREREELDFTFQNGVEAVRILLLEGFNK 291
Query: 178 -VSFLNHIVSVRK 189
SF+N S+ +
Sbjct: 292 SASFVNTAKSLEQ 304
>gi|325265260|ref|ZP_08131985.1| aminoacyl-tRNA hydrolase [Clostridium sp. D5]
gi|324029439|gb|EGB90729.1| aminoacyl-tRNA hydrolase [Clostridium sp. D5]
Length = 192
Score = 247 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNP +Y RHN+GF ID I S + KK A I +G + G + IL K
Sbjct: 1 MYIIAGLGNPDRQYEGTRHNVGFEVIDTIASKYNIAVDTKKHRAFIGKGVIGGQKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S++ ++ +YK+ + +VI+DD+ L G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESIISLVEYYKIDEEQELIVIYDDVSLGVGQLRIRAKGSAGGHNGIKNIIS 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+++G+G P + +VLG+F+ E + +N ++ ++ E +
Sbjct: 121 HLGSEVFPRIKVGVGEKPPKYDLADYVLGHFTKAEHELMEAGYENAVHAVEMIISGEIQA 180
Query: 180 FLNHIVSVRK 189
+N +K
Sbjct: 181 AMNEYNRKKK 190
>gi|254520522|ref|ZP_05132578.1| peptidyl-tRNA hydrolase [Clostridium sp. 7_2_43FAA]
gi|226914271|gb|EEH99472.1| peptidyl-tRNA hydrolase [Clostridium sp. 7_2_43FAA]
Length = 191
Score = 247 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 76/189 (40%), Positives = 117/189 (61%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG EY RHNIGF ID I + + + KF EG ++ + IL+K
Sbjct: 1 MFLIVGLGNPGKEYDGTRHNIGFEAIDYISNKYNIDINRTKFKGVYGEGFINNNKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ EV+NFYKL N E +VI+DD+ L+ G LR++ G GHNG+KSI
Sbjct: 61 PTTYMNLSGESIREVINFYKLENDE-VIVIYDDISLEVGKLRIREKGSAGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R++IG+G+P T+ ++ HVLG F+ + L+ +ID ++++ ++ K
Sbjct: 120 NIGTDIFPRVKIGVGQP--TSDLVSHVLGRFNKEDMDSLIEVIDASSKAVEVIIKDGTKE 177
Query: 180 FLNHIVSVR 188
+N +
Sbjct: 178 AMNRFNGFK 186
>gi|323136055|ref|ZP_08071138.1| peptidyl-tRNA hydrolase [Methylocystis sp. ATCC 49242]
gi|322399146|gb|EFY01665.1| peptidyl-tRNA hydrolase [Methylocystis sp. ATCC 49242]
Length = 201
Score = 247 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 113/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIGFM I+ I H FPA + +F EG + G R +L++
Sbjct: 1 MLLFVGLGNPGRAYARNRHNIGFMAIEAIARRHGFPAARARFQGLSREGTIAGERVMLLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ E F+K+ E +V HD+LDL R+KTGGG AGHNGL+SI+
Sbjct: 61 PQTYMNESGRSVGEAARFHKIGVGE-IVVFHDELDLAPAKCRVKTGGGVAGHNGLRSITA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +YKR+R+GIG P D + + +VL +F E ++ + D IA + L+ K +D
Sbjct: 120 HVGNDYKRVRMGIGHPGDKSLVHSYVLNDFGRSEEPWVEALCDAIADNADLIVKGDDAGL 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNRLH 184
>gi|56961863|ref|YP_173585.1| peptidyl-tRNA hydrolase [Bacillus clausii KSM-K16]
gi|68052898|sp|Q5WAD6|PTH_BACSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56908097|dbj|BAD62624.1| peptidyl-tRNA hydrolase stage V sporulation protein C [Bacillus
clausii KSM-K16]
Length = 185
Score = 247 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHNIGF IDR P K+KF A E ++ + +L+K
Sbjct: 1 MKLVVGLGNPGKKYEHTRHNIGFDIIDRCAQKLDLPLDKQKFKAIYGEKRIGSEKVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ M+++ + N E +VI+DDLDL G +RL+ G GHNG+KS+
Sbjct: 61 PLTYMNLSGEAVRPFMDYFNISNDE-LVVIYDDLDLPVGKIRLRKKGSAGGHNGIKSLIA 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ R+R+GIGRP ++ +VL + E F+ + A+++ ++ +
Sbjct: 120 HLGTEDFNRIRVGIGRPAHGEPVVHYVLDTYRKEELAFMNEAAEKSAKAIEAWLEKPFLE 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 VMNTFN 185
>gi|212711985|ref|ZP_03320113.1| hypothetical protein PROVALCAL_03061 [Providencia alcalifaciens DSM
30120]
gi|212685507|gb|EEB45035.1| hypothetical protein PROVALCAL_03061 [Providencia alcalifaciens DSM
30120]
Length = 196
Score = 247 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H ++ KF + + G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLAQRHNQSLKEEPKFFGYTARINIGGNDIRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ V NFY++ N + LV HD+LDL G ++K GG + GHNGLK I
Sbjct: 65 PTTFMNLSGKSVAAVANFYRI-NPDEILVAHDELDLPPGVAKMKLGGSNGGHNGLKDIQS 123
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K N+ RLRIGIG P D ++ VLG E+ + ID R +L
Sbjct: 124 KFANNPNFYRLRIGIGHPGDKNKVVGFVLGKPPLSEQKLIDDAIDESVRCTDILLSDGMD 183
Query: 179 SFLNHIVSVR 188
+N + +
Sbjct: 184 KAINRLHGFK 193
>gi|167758783|ref|ZP_02430910.1| hypothetical protein CLOSCI_01125 [Clostridium scindens ATCC 35704]
gi|167663523|gb|EDS07653.1| hypothetical protein CLOSCI_01125 [Clostridium scindens ATCC 35704]
Length = 194
Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 105/190 (55%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNP +Y RHN GF ID + + +K A I +G ++G + IL K
Sbjct: 1 MFIIAGLGNPTLQYEGTRHNAGFDVIDTLAGKYNISVDGRKNRALIGKGIIEGKKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+SL ++++YK+ +LV++DD+ LD G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESLGGLVDYYKVDEESEFLVVYDDISLDVGQLRIRKKGSAGGHNGMKNIIS 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+++G+G P + +VL FS ER + ++ ++ + E
Sbjct: 121 HLGTEVFPRIKVGVGEKPKKYDLADYVLSRFSKEERAIMEEGCQKAVEAVEMILRGEMEE 180
Query: 180 FLNHIVSVRK 189
+N K
Sbjct: 181 AMNKFNRKVK 190
>gi|325295184|ref|YP_004281698.1| peptidyl-tRNA hydrolase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065632|gb|ADY73639.1| Peptidyl-tRNA hydrolase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 189
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 78/186 (41%), Positives = 110/186 (59%), Gaps = 5/186 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL-DGLRTILIKP 61
++ GLGNPG +Y + RHN+G+M +DR+ K+KF +I+E + DG + L+KP
Sbjct: 4 LIVGLGNPGKKYEKTRHNVGWMVLDRLAEVLGTDFSKEKFKGKIAELRNDDGKKIFLLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ E+ FYK+ E LVI+DDLDL G LRL+ G GH G+ SI +
Sbjct: 64 ITYMNLSGESVGELAKFYKIKP-EETLVIYDDLDLPLGKLRLRLKGSSGGHKGVASIEQC 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +N+ RLRIGIGRP ++ +VL F E L ID L + K+ D+
Sbjct: 123 FGSQNFSRLRIGIGRPQTKEEVVNYVLSPFREDELEALGKAIDKAVSCLKEVIKKGDID- 181
Query: 181 LNHIVS 186
N I+S
Sbjct: 182 -NKIMS 186
>gi|209550347|ref|YP_002282264.1| peptidyl-tRNA hydrolase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|226707861|sp|B5ZY55|PTH_RHILW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|209536103|gb|ACI56038.1| Aminoacyl-tRNA hydrolase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 243
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 96/185 (51%), Positives = 127/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH H F W KKF AEI+EG+L G + +LIK
Sbjct: 1 MLIIAGLGNPGGKYAGNRHNIGFMAVDAIHRRHSFSPWSKKFRAEIAEGELGGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+++ E M FYKL + + I+D+LDL G RLKTGGG GHNG+KS+
Sbjct: 61 PQTFMNLSGEAVGEAMRFYKL-QPADLVAIYDELDLPAGKARLKTGGGHGGHNGIKSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P + HVLG+F+ ++ +L P++D +A + +L + ED
Sbjct: 120 HCGKEYRRLRLGIGHPGIKEMVQNHVLGDFAKADKAWLEPLLDTLADNADMLVRNEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|26453108|dbj|BAC43630.1| unknown protein [Arabidopsis thaliana]
gi|28950849|gb|AAO63348.1| At1g18440 [Arabidopsis thaliana]
Length = 288
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 109/193 (56%), Gaps = 6/193 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D + F A +G + + +L KP
Sbjct: 95 WLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKP 154
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFM+LSG+S+ ++++FYK+P L+ LV++DDLDL FG LRL GG GHNG++SI ++
Sbjct: 155 QTFMDLSGESVGQIVSFYKIP-LKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 213
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED-- 177
+++ RLRIGIGRPP VL F+ E+ L ++ +L
Sbjct: 214 LKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNK 273
Query: 178 -VSFLNHIVSVRK 189
+F+N S+ +
Sbjct: 274 SATFVNTRKSMEQ 286
>gi|160895087|ref|ZP_02075861.1| hypothetical protein CLOL250_02638 [Clostridium sp. L2-50]
gi|156863518|gb|EDO56949.1| hypothetical protein CLOL250_02638 [Clostridium sp. L2-50]
Length = 185
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 66/186 (35%), Positives = 104/186 (55%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF I + + +KK A G ++G + IL
Sbjct: 1 MKLIVGLGNPGTKYAGTRHNVGFSVIVGLADKYNIELSEKKHKAIYGRGMIEGEKVILAM 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E++++YK + + +V +DD+DL G LR++ G GHNG+K+I
Sbjct: 61 PQTFMNLSGESVRELVDYYKC-DPSDVIVAYDDIDLAVGKLRIREKGSAGGHNGMKNIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GIG+ PD + +VL F E + DN ++ L+ K +
Sbjct: 120 HLGTQEFVRVRVGIGKKPDRMDLADYVLSRFGKDELPEIKAGCDNAGDAIALILKDSAAA 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNKYN 185
>gi|210623287|ref|ZP_03293704.1| hypothetical protein CLOHIR_01654 [Clostridium hiranonis DSM 13275]
gi|210153688|gb|EEA84694.1| hypothetical protein CLOHIR_01654 [Clostridium hiranonis DSM 13275]
Length = 186
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNPG +Y + RHN GF IDR+ + K K A I EG++ + +L+K
Sbjct: 1 MYIIVGLGNPGQKYAKTRHNAGFEVIDRLADEYGISVTKIKHKALIGEGRVGTEKVVLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++ + FYK P+L+ +VI+DD+DLD G LR++ G HNG++SI++
Sbjct: 61 PTTYMNLSGESVVSLYQFYK-PDLDKLIVIYDDIDLDVGKLRIRKKGSPGTHNGMRSITQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ R R+G+G+P + VL + + + A+++ + +
Sbjct: 120 CLGTKDFPRFRVGVGKPDKGRDLADFVLSRVPKEQDEAMNEGFEKTAKAIDSMIREGIDM 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNKYN 185
>gi|322807865|emb|CBZ05440.1| peptidyl-tRNA hydrolase [Clostridium botulinum H04402 065]
Length = 189
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 70/189 (37%), Positives = 114/189 (60%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGN G EY + RHNIGF +D I + ++KF EG++ + IL+K
Sbjct: 1 MYLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NFYK+ + EN +VI+DD+ +D G LR++ G GHNG+K+I +
Sbjct: 61 PSTYMNLSGESVIEAANFYKI-DKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+GIG+P +++ +VLG FS ER + ++ A++ + +
Sbjct: 120 HLNSDIFPRVRVGIGQP--DENVVNYVLGKFSKDEREIIEKVLSMSAKACISIVEDGVTE 177
Query: 180 FLNHIVSVR 188
+N V+
Sbjct: 178 AMNKYNGVK 186
>gi|258513563|ref|YP_003189785.1| peptidyl-tRNA hydrolase [Desulfotomaculum acetoxidans DSM 771]
gi|257777268|gb|ACV61162.1| peptidyl-tRNA hydrolase [Desulfotomaculum acetoxidans DSM 771]
Length = 196
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 79/191 (41%), Positives = 109/191 (57%), Gaps = 3/191 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID++ + KK + + +G L + IL K
Sbjct: 1 MKLIVGLGNPGIEYRNTRHNIGFMVIDQLAEKYGVDVQKKMMRSVLGQGWLGSQKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSGQS+ +MN+YKL E LVI DDL+L+ G LRL+ G D GHNGLKSI +
Sbjct: 61 PLTYMNLSGQSVQALMNWYKLTAQE-LLVICDDLNLEAGHLRLRKKGSDGGHNGLKSIIQ 119
Query: 121 KCGK-NYKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G ++ RLR+GIGRP + VLG F+ E L +I ++ + +
Sbjct: 120 ALGTSDFPRLRLGIGRPSHPGQEQVSFVLGKFAPQEAELLSQLIGRGEQAAAVWVENGID 179
Query: 179 SFLNHIVSVRK 189
+ +N R+
Sbjct: 180 AAMNEFNRSRR 190
>gi|219666189|ref|YP_002456624.1| peptidyl-tRNA hydrolase [Desulfitobacterium hafniense DCB-2]
gi|119390936|sp|Q251S4|PTH_DESHY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783865|sp|B8FZA5|PTH_DESHD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219536449|gb|ACL18188.1| Aminoacyl-tRNA hydrolase [Desulfitobacterium hafniense DCB-2]
Length = 185
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 72/183 (39%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y E RHN GF+ +D + ++ KF ++E + G + L+K
Sbjct: 1 MKLIAGLGNPGGQYAETRHNAGFLLLDCLAEE-LKLDFRPKFQGLVAETMMGGEKVYLLK 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E+ FYK+ ++ +V++DD+DL G LRL++ G GHNG+KS
Sbjct: 60 PQTFMNLSGRSIRELAQFYKIAP-KDIMVVYDDMDLPIGRLRLRSSGSAGGHNGIKSTIA 118
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G ++ RL++GIGRP R+VL +F+ E L I+D +++ L AK
Sbjct: 119 ELGTEDFWRLKVGIGRPTAGWDSARYVLASFTKEELPVLEEILDKGIKAVTLWAKEGGDK 178
Query: 180 FLN 182
+N
Sbjct: 179 AMN 181
>gi|300723043|ref|YP_003712341.1| peptidyl-tRNA hydrolase [Xenorhabdus nematophila ATCC 19061]
gi|297629558|emb|CBJ90161.1| peptidyl-tRNA hydrolase [Xenorhabdus nematophila ATCC 19061]
Length = 196
Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + + + KF + ++G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWFVDSLAQRYNQSLKEESKFFGYTARININGQDIRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+L + FY++ E LV HD+LDL G ++K GG + GHNGLK I
Sbjct: 65 PTTFMNLSGKSVLTLAGFYRIEPDE-ILVAHDELDLPPGVAKMKLGGSNGGHNGLKDIQN 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K N + RLRIGIG P D ++ VLG + E+ + ID R +L K
Sbjct: 124 KFSNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPASEQQLIDDAIDEALRCTDILIKDGMN 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 KAINRLHAFK 193
>gi|83859405|ref|ZP_00952926.1| peptidyl-tRNA hydrolase [Oceanicaulis alexandrii HTCC2633]
gi|83852852|gb|EAP90705.1| peptidyl-tRNA hydrolase [Oceanicaulis alexandrii HTCC2633]
Length = 194
Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats.
Identities = 79/189 (41%), Positives = 113/189 (59%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL----DGLRT 56
M ++ GLGNPG +Y NRHN+GFM +D I WK +F + +EG + +
Sbjct: 1 MHLIVGLGNPGGKYAGNRHNVGFMALDAIAEDWRLGPWKSRFSGQTAEGVVETGQGPKKV 60
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L+KPQTF N SG+++ E FYK+ + +V HD+LDL G RLKTGGG AG+NGL+
Sbjct: 61 LLLKPQTFYNESGRAVAEAARFYKI-EADKIMVFHDELDLAPGKFRLKTGGGHAGNNGLR 119
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
S ++KR RIGIG P D + VLG+FS E +L P++D IAR+ PL+ +
Sbjct: 120 STKAHIEGDFKRGRIGIGHPGDKNQVTNWVLGDFSKAEGEWLGPLLDAIARAFPLILEGN 179
Query: 177 DVSFLNHIV 185
+ +F +
Sbjct: 180 EDAFQTRVT 188
>gi|116253216|ref|YP_769054.1| peptidyl-tRNA hydrolase [Rhizobium leguminosarum bv. viciae 3841]
gi|119390989|sp|Q1MDL5|PTH_RHIL3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|115257864|emb|CAK08962.1| putative peptidyl-tRNA hydrolase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 243
Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats.
Identities = 94/185 (50%), Positives = 127/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH H F W KKF AEI+EG++ G + +L+K
Sbjct: 1 MLIIAGLGNPGGKYAGNRHNIGFMAVDAIHRRHGFSPWSKKFRAEIAEGEVGGEKVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E M FYKL + + I+D+LDL G RLKTGGG GHNG+KS+
Sbjct: 61 PQTFMNLSGESVGEAMRFYKL-QPADLVAIYDELDLPQGKARLKTGGGHNGHNGIKSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG+ Y+RLR+GIG P + HVLG+F+ ++ +L P++D +A + +L + ED
Sbjct: 120 HCGREYRRLRLGIGHPGIKDMVQNHVLGDFAKADKAWLEPLLDTLADNADMLVRNEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|288958835|ref|YP_003449176.1| peptidyl-tRNA hydrolase, PTH1 family [Azospirillum sp. B510]
gi|288911143|dbj|BAI72632.1| peptidyl-tRNA hydrolase, PTH1 family [Azospirillum sp. B510]
Length = 190
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 82/185 (44%), Positives = 123/185 (66%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG+EY NRHNIGFM ++ I H F WKK+F + +EG + G + + ++
Sbjct: 1 MLLLVGLGNPGNEYARNRHNIGFMAVETIARRHRFTPWKKRFQGQTAEGAVAGDKVLALE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS++ + FYKL EN +VIHD+LDL G +R+K GGG GHNGL+SI
Sbjct: 61 PATFMNLSGQSVVAALQFYKLKP-ENVVVIHDELDLPPGKIRVKKGGGHGGHNGLRSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
GK Y R+R+GIG P + + +VL +F+ ++ ++ P++D ++ +LPL+ + F
Sbjct: 120 HIGKEYWRIRLGIGHPGNKDLVSGYVLHDFAKADQGWIDPLLDAVSDNLPLIVDGQPELF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNKVT 184
>gi|222110036|ref|YP_002552300.1| peptidyl-tRNA hydrolase [Acidovorax ebreus TPSY]
gi|254783866|sp|B9ME46|PTH_DIAST RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|221729480|gb|ACM32300.1| peptidyl-tRNA hydrolase [Acidovorax ebreus TPSY]
Length = 211
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 3/189 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG EY RHN GF ID + ++ +H ++ + G L++
Sbjct: 3 KLFVGLGNPGPEYEATRHNAGFWWIDALARELKVTLVPERSYHGLVARASVAGHSVWLLQ 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ + F+K+P E LV HD+LD+ G +LK GG AGHNGL+ I
Sbjct: 63 PQTFMNLSGKSVAALARFFKIPP-EEILVAHDELDIPPGQAKLKRGGSHAGHNGLRDIHA 121
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLRIGIG P A ++ VL + +R + I + ++ P L +
Sbjct: 122 QLGTSDYWRLRIGIGHPGVKAEVVNWVLKKPAPDQRTLIEDSILHSLKAYPALLAGDMDK 181
Query: 180 FLNHIVSVR 188
+ + +
Sbjct: 182 ATLLVHTTK 190
>gi|121593315|ref|YP_985211.1| peptidyl-tRNA hydrolase [Acidovorax sp. JS42]
gi|166199298|sp|A1W4G0|PTH_ACISJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|120605395|gb|ABM41135.1| peptidyl-tRNA hydrolase [Acidovorax sp. JS42]
Length = 211
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 3/189 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG EY RHN GF ID + ++ +H ++ + G L++
Sbjct: 3 KLFVGLGNPGPEYEATRHNAGFWWIDALARELKVTLVPERSYHGLVARASVAGHSVWLLQ 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ + F+K+P E LV HD+LD+ G +LK GG AGHNGL+ I
Sbjct: 63 PQTFMNLSGKSVAALARFFKIPP-EEILVAHDELDIPPGQAKLKRGGSHAGHNGLRDIHA 121
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLRIGIG P A ++ VL + +R + I + ++ P L +
Sbjct: 122 QLGTSDYWRLRIGIGHPGVKAEVVNWVLKKPAPDQRTLIEDSILHSLKAYPALLAGDMDK 181
Query: 180 FLNHIVSVR 188
+ + +
Sbjct: 182 ATLLVHTTK 190
>gi|323691737|ref|ZP_08105997.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14673]
gi|323504215|gb|EGB20017.1| peptidyl-tRNA hydrolase [Clostridium symbiosum WAL-14673]
Length = 202
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG EY +RHN+GFM +D + + +K A I +G ++G + IL+K
Sbjct: 1 MYIIAGLGNPGKEYAGSRHNVGFMTLDELADRYNIDVREKAHKALIGKGMIEGNKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ VM++YK E ++VI+DD+ L+ G +R++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESIRSVMDYYKTEPSE-FIVIYDDISLEPGQIRIRKKGSAGGHNGIKNIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+RIG+G P + +VLG+FS E+ + + + + +
Sbjct: 120 HLGTQEFPRIRIGVGEKPARMDLADYVLGHFSKEEKERMEQAFKDGVAAAVAMMNDGVDT 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNRFN 185
>gi|260753466|ref|YP_003226359.1| peptidyl-tRNA hydrolase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552829|gb|ACV75775.1| peptidyl-tRNA hydrolase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 189
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 82/189 (43%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I AGLGNPG Y NRHN+GFM +D + S F WK+ F ++S GQ+D R +L+K
Sbjct: 1 MQIWAGLGNPGSSYALNRHNVGFMAVDMLASERSFAPWKRAFQGQVSLGQIDQERILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E M FYKL E+ V HD+LD+ +++K GGG AGHNGL+S
Sbjct: 61 PATFMNESGRAIGEAMRFYKLAP-EDVTVFHDELDIAPMRVKVKKGGGAAGHNGLRSTIA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G++++R+R+GIG P + + + +VLGNF+ E L +++ I +++P LA +D F
Sbjct: 120 HIGQSFRRVRLGIGHPGEKSRVHDYVLGNFAKSETDSLAGMLNAINQAIPWLANDDDARF 179
Query: 181 LNHIVSVRK 189
++ I R+
Sbjct: 180 MSEIALRRQ 188
>gi|86742630|ref|YP_483030.1| peptidyl-tRNA hydrolase [Frankia sp. CcI3]
gi|119390941|sp|Q2J5Z1|PTH_FRASC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86569492|gb|ABD13301.1| peptidyl-tRNA hydrolase [Frankia sp. CcI3]
Length = 197
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 76/187 (40%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++VAGLGNPG Y NRHN GFM +D + + A+++E +L G R +L +P
Sbjct: 11 WLVAGLGNPGPTYAGNRHNAGFMVVDLLAERTGSRLKSHRSRADVAETRLAGARAVLARP 70
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+FMNLSG + +FYK+ + +V+HD+LD+ FG +RLK GGGD GHNGL+SIS
Sbjct: 71 LSFMNLSGGPVAAARSFYKV-EVSRLIVVHDELDIPFGAVRLKRGGGDNGHNGLRSISSA 129
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y R+R+GIGRPP VL +F+S ER L ++++ A S+ +L
Sbjct: 130 LGTRDYLRVRVGIGRPPGRMDPADFVLRDFTSTERRELPLLLEHAADSVEMLIADGLEPA 189
Query: 181 LNHIVSV 187
N ++
Sbjct: 190 QNRYHAL 196
>gi|268592702|ref|ZP_06126923.1| aminoacyl-tRNA hydrolase [Providencia rettgeri DSM 1131]
gi|291311844|gb|EFE52297.1| aminoacyl-tRNA hydrolase [Providencia rettgeri DSM 1131]
Length = 196
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H P ++ KF + ++G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQPLKEEAKFFGYTARINMNGNDIRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + NFY++ NL+ LV HD+LDL G ++K GG + GHNGLK I
Sbjct: 65 PTTFMNLSGKSVAAIANFYRI-NLDEILVAHDELDLPPGVAKMKLGGSNGGHNGLKDIQS 123
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K N+ RLRIGIG P D ++ VLG E+ + ID AR +L
Sbjct: 124 KFANNPNFYRLRIGIGHPGDKNKVVGFVLGKPPLSEQKLIDDAIDEAARCTDILLADGMG 183
Query: 179 SFLNHIVSVR 188
+N + +
Sbjct: 184 KAINRLHGFK 193
>gi|294629796|ref|ZP_06708356.1| peptidyl-tRNA hydrolase [Streptomyces sp. e14]
gi|292833129|gb|EFF91478.1| peptidyl-tRNA hydrolase [Streptomyces sp. e14]
Length = 203
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 77/191 (40%), Positives = 112/191 (58%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLD-----GLR 55
+++ GLGNPG EY NRHN+GFM D + + K A++ EG++ R
Sbjct: 14 WLIVGLGNPGPEYAMNRHNVGFMVADLLADRMGGRFKRAGKAQAQVVEGRIGPPGPASRR 73
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L KP ++MNLSG + + +FYK+P L++ + +HD+LD+D+G LRLK GGGD GHNGL
Sbjct: 74 VVLAKPMSYMNLSGGPVNALRDFYKVP-LDHVVAVHDELDIDYGVLRLKRGGGDNGHNGL 132
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G +Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 133 KSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELDYFVDRAADAVECLLAE 192
Query: 176 EDVSFLNHIVS 186
+ S
Sbjct: 193 GLERAQSAYNS 203
>gi|163867940|ref|YP_001609144.1| peptidyl-tRNA hydrolase [Bartonella tribocorum CIP 105476]
gi|189038279|sp|A9IR82|PTH_BART1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|161017591|emb|CAK01149.1| Peptidyl-tRNA hydrolase [Bartonella tribocorum CIP 105476]
Length = 193
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 92/189 (48%), Positives = 132/189 (69%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y NRHNIGFM +D ++ F W KKF AEIS G ++ + LIK
Sbjct: 1 MWLIAGLGNPGSQYRNNRHNIGFMAVDAVYQSFSFSPWSKKFQAEISNGFINNEKVFLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ E + FYKL +L+N ++I+D+LDL G +R+K GGG+ GHNG+KSI
Sbjct: 61 PQTFMNLSGQAIGEALRFYKL-DLKNLIIIYDELDLSPGRVRIKIGGGNNGHNGIKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG +Y R+RIGIG P + +HVLGNF+ ++ +L P++D +A+++ LL K + F
Sbjct: 120 HCGTDYCRIRIGIGHPGSKELVHQHVLGNFTKFDQEWLSPLLDALAKNIALLIKGDKSLF 179
Query: 181 LNHIVSVRK 189
+N + K
Sbjct: 180 MNEVSQTIK 188
>gi|168181009|ref|ZP_02615673.1| peptidyl-tRNA hydrolase [Clostridium botulinum NCTC 2916]
gi|226950996|ref|YP_002806087.1| peptidyl-tRNA hydrolase [Clostridium botulinum A2 str. Kyoto]
gi|254783862|sp|C1FNE6|PTH_CLOBJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|182668160|gb|EDT80139.1| peptidyl-tRNA hydrolase [Clostridium botulinum NCTC 2916]
gi|226842368|gb|ACO85034.1| aminoacyl-tRNA hydrolase [Clostridium botulinum A2 str. Kyoto]
Length = 189
Score = 246 bits (630), Expect = 7e-64, Method: Composition-based stats.
Identities = 70/189 (37%), Positives = 114/189 (60%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGN G EY + RHNIGF +D I + ++KF EG++ + IL+K
Sbjct: 1 MYLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NFYK+ + EN +VI+DD+ +D G LR++ G GHNG+K+I +
Sbjct: 61 PSTYMNLSGESVIEAANFYKI-DKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+GIG+P +++ +VLG FS ER + ++ A++ + +
Sbjct: 120 HLNSDIFPRVRVGIGQP--DENVVNYVLGKFSKDEREIIEKVLAMSAKACISIVEDGVTE 177
Query: 180 FLNHIVSVR 188
+N V+
Sbjct: 178 AMNKYNGVK 186
>gi|258541470|ref|YP_003186903.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-01]
gi|256632548|dbj|BAH98523.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-01]
gi|256635605|dbj|BAI01574.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-03]
gi|256638660|dbj|BAI04622.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-07]
gi|256641714|dbj|BAI07669.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-22]
gi|256644769|dbj|BAI10717.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-26]
gi|256647824|dbj|BAI13765.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-32]
gi|256650877|dbj|BAI16811.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653868|dbj|BAI19795.1| peptidyl-tRNA hydrolase [Acetobacter pasteurianus IFO 3283-12]
Length = 193
Score = 246 bits (630), Expect = 8e-64, Method: Composition-based stats.
Identities = 77/187 (41%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP +RHN+GFM ++ I + F W+ +F E++EG++ G + +L+
Sbjct: 1 MLLWVGLGNPESSMRRHRHNVGFMAVEAIARKYGFTPWRNRFKGEVAEGRIGGQKVLLLL 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ E FYK+ EN V HD+LDL G LR+K GGG AGHNGL+S +
Sbjct: 61 PMTYMNKSGESVQEAAAFYKIAP-ENITVFHDELDLAPGRLRIKRGGGAAGHNGLRSTDK 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER-YFLLPIIDNIARSLPLLAKREDV 178
G Y R+RIGIG P + VLGNF+ +R +L ++D +A + PLLA
Sbjct: 120 MLGTPEYWRVRIGIGHPGAKERVHGWVLGNFTETDRQEWLERLLDRMADAAPLLADGRAD 179
Query: 179 SFLNHIV 185
F+ +
Sbjct: 180 QFMTKVA 186
>gi|20808916|ref|NP_624087.1| peptidyl-tRNA hydrolase [Thermoanaerobacter tengcongensis MB4]
gi|22095992|sp|Q8R757|PTH_THETN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|20517576|gb|AAM25691.1| Peptidyl-tRNA hydrolase [Thermoanaerobacter tengcongensis MB4]
Length = 185
Score = 246 bits (630), Expect = 8e-64, Method: Composition-based stats.
Identities = 76/186 (40%), Positives = 115/186 (61%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG EY RHN+GFM ID + + KF + + EG G + IL+K
Sbjct: 1 MYIIAGLGNPGKEYEGTRHNVGFMVIDALSKKLGIEVSRLKFKSLMGEGHFKGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG++L + +NFYK+P LEN +V++DD DL+ G +R++ G GHNG+ SI
Sbjct: 61 PQTFMNLSGEALYDAVNFYKIP-LENVIVVYDDKDLEVGKIRIRRKGSSGGHNGMNSIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ R+RIGIG+P D ++RHVLG FS E+ + ++ A ++ + +
Sbjct: 120 LLNSEDFPRVRIGIGKPED-GDLVRHVLGRFSDEEKKVIDEAVERAAEAVIDIMENGIEH 178
Query: 180 FLNHIV 185
++
Sbjct: 179 AMSRFN 184
>gi|268317961|ref|YP_003291680.1| peptidyl-tRNA hydrolase [Rhodothermus marinus DSM 4252]
gi|262335495|gb|ACY49292.1| peptidyl-tRNA hydrolase [Rhodothermus marinus DSM 4252]
Length = 194
Score = 246 bits (630), Expect = 8e-64, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 99/187 (52%), Gaps = 2/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG Y RHN GFM +DR+ + +K + + GQL+G L+KP
Sbjct: 6 LIVGLGNPGPRYANTRHNAGFMVVDRLAERYGIAWRSEKGPSLLGWGQLEGCPAGLMKPL 65
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG ++ EV+ +Y++P LE LV++DD+ L G +RL+ GG GHNG++ I
Sbjct: 66 TYMNRSGAAVAEVVRYYRIP-LERLLVVYDDIHLPPGRIRLRPGGSAGGHNGVEDIIRAL 124
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G + RLRIGIG + +VL F+ E + ++ ++ A + +
Sbjct: 125 GTTAFPRLRIGIGSNFERGRQADYVLSPFTREEWPLIDEALERACQAAVTFACEGIEAAM 184
Query: 182 NHIVSVR 188
N V
Sbjct: 185 NRYNRVE 191
>gi|240850145|ref|YP_002971538.1| peptidyl-tRNA hydrolase [Bartonella grahamii as4aup]
gi|240267268|gb|ACS50856.1| peptidyl-tRNA hydrolase [Bartonella grahamii as4aup]
Length = 193
Score = 246 bits (630), Expect = 9e-64, Method: Composition-based stats.
Identities = 95/189 (50%), Positives = 132/189 (69%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y NRHNIGFM +D I+ F W KKF AEIS G ++ + LIK
Sbjct: 1 MWLIAGLGNPGLQYQNNRHNIGFMAVDAIYQSFSFSPWSKKFQAEISNGFINNEKIFLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ E + FYKL +L+N ++I+D+LDL G +R+K GGG+ GHNG+KSI
Sbjct: 61 PQTFMNLSGQAIGEALRFYKL-DLKNLIIIYDELDLSPGKVRIKIGGGNNGHNGIKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG NY R+RIGIG P + +HVLGNF+ ++ +L P+++ IA+++ LL K + F
Sbjct: 120 HCGTNYCRIRIGIGHPGSKELVHQHVLGNFAKSDQEWLSPLLETIAKNIALLIKDDKSLF 179
Query: 181 LNHIVSVRK 189
+N I K
Sbjct: 180 MNEISQTIK 188
>gi|51894373|ref|YP_077064.1| peptidyl-tRNA hydrolase [Symbiobacterium thermophilum IAM 14863]
gi|68052923|sp|Q67JD0|PTH_SYMTH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|51858062|dbj|BAD42220.1| Stage V sporulation protein C, peptidyl-tRNA hydrolase
[Symbiobacterium thermophilum IAM 14863]
Length = 189
Score = 246 bits (630), Expect = 9e-64, Method: Composition-based stats.
Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 4/188 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD--GLRTILI 59
++ GLGNPG Y RHN G+M +D H ++ F E + + IL+
Sbjct: 3 KLIVGLGNPGPRYAATRHNAGWMLLDAFARKHGVAIEQRGFEGLYGELRWGAEAEKVILL 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S+ + FY++ + LV+ DDLDL+ G LRL+ G GHNG+KS+
Sbjct: 63 KPLTYMNLSGRSVAQAARFYRIAPA-DILVLFDDLDLEPGRLRLRAKGSAGGHNGVKSVI 121
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G + RLRIGIGRP +I VL F + + + ++ +
Sbjct: 122 AELGTAEFPRLRIGIGRPAPGWEVIDWVLAPFGPDDAAAVAAALPRAVEAVECFLTEGIL 181
Query: 179 SFLNHIVS 186
+ +N +
Sbjct: 182 AAMNRYNT 189
>gi|315644368|ref|ZP_07897508.1| peptidyl-tRNA hydrolase [Paenibacillus vortex V453]
gi|315280245|gb|EFU43537.1| peptidyl-tRNA hydrolase [Paenibacillus vortex V453]
Length = 187
Score = 246 bits (630), Expect = 9e-64, Method: Composition-based stats.
Identities = 71/186 (38%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y + RHN+GFM +D + H + K + I+EG + G +T+LIK
Sbjct: 1 MKWIVGLGNPGPAYEKTRHNVGFMALDALAERHGMKFNQNKCKSVIAEGMIGGSKTVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ M++YK+ NLE+ +V++DDLD G +RL+ G GHNG+KSI +
Sbjct: 61 PMTFMNLSGEAVRAYMDYYKV-NLEDMIVVYDDLDTVVGKIRLRYQGSAGGHNGIKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ R+R+GI RP I+ +VLG F ER L +++ +L
Sbjct: 120 HTGTQSFNRVRMGISRPEPGYAIVDYVLGTFPKKEREQLQSMVEETCDALEFSLDHTFEQ 179
Query: 180 FLNHIV 185
+
Sbjct: 180 TMAKFN 185
>gi|78484739|ref|YP_390664.1| peptidyl-tRNA hydrolase [Thiomicrospira crunogena XCL-2]
gi|119391032|sp|Q31IN3|PTH_THICR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78363025|gb|ABB40990.1| peptidyl-tRNA hydrolase [Thiomicrospira crunogena XCL-2]
Length = 192
Score = 246 bits (630), Expect = 9e-64, Method: Composition-based stats.
Identities = 74/187 (39%), Positives = 105/187 (56%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN GF ++ + + + KF E + Q +GL L+K
Sbjct: 5 KLIVGLGNPGGQYEQTRHNAGFWFVEDVARQYNVQFRPETKFLGEAARIQSNGLDVWLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQS+ + FYK+ E LV+HD+LDLD G RLKT GG GHNGL+
Sbjct: 65 PMTFMNRSGQSIQAIAKFYKIAP-EEILVVHDELDLDPGVARLKTSGGHGGHNGLRDTIA 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++KRLR+GIG P D ++ +VL S +R + I + R LP L +
Sbjct: 124 ALGTKDFKRLRLGIGHPGDRNQVVDYVLKAPSKTDRALIDDAIYDATRVLPDLLNDDMAR 183
Query: 180 FLNHIVS 186
+N + +
Sbjct: 184 AMNELHT 190
>gi|304405855|ref|ZP_07387513.1| peptidyl-tRNA hydrolase [Paenibacillus curdlanolyticus YK9]
gi|304345098|gb|EFM10934.1| peptidyl-tRNA hydrolase [Paenibacillus curdlanolyticus YK9]
Length = 186
Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y RHN+GFM ID + + K A I EG + G + LIK
Sbjct: 1 MKWIVGLGNPGTKYQNTRHNVGFMAIDSLAKRWGISVTQSKCKALIGEGNVGGTKVALIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ M++YK+ LE+ +VI+DDLD + G +RL+ G GHNG+KSI +
Sbjct: 61 PMTYMNLSGETVRAYMDYYKVA-LEDLIVIYDDLDTEMGRIRLRYQGSPGGHNGIKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GI RP +I +VL NF E+ L +I+ + K
Sbjct: 120 HTGTQTFNRIRMGITRPLPGGNIADYVLDNFPKAEQDKLAIMIEQTCDAAEFALKATFEQ 179
Query: 180 FLNHIV 185
+
Sbjct: 180 TMAKFN 185
>gi|300024019|ref|YP_003756630.1| peptidyl-tRNA hydrolase [Hyphomicrobium denitrificans ATCC 51888]
gi|299525840|gb|ADJ24309.1| peptidyl-tRNA hydrolase [Hyphomicrobium denitrificans ATCC 51888]
Length = 247
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 83/185 (44%), Positives = 122/185 (65%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGF+ +DRI H F W+KKF +SEG + R +L+K
Sbjct: 1 MKLFVGLGNPGEKYSANRHNIGFLALDRIAERHGFAPWRKKFQGLVSEGTIGTDRVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MN SG+S+ E F K+P + + V HD+LDL G +++K GGG+AGHNGL+SIS
Sbjct: 61 PETYMNESGRSVGEAQRFLKIP-ISDVYVFHDELDLAPGKVKVKAGGGNAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+YKR+R+GIG P ++ +VL +F+ ER +L ++D ++ + P LAK +D F
Sbjct: 120 HLENDYKRVRLGIGHPGAKDAVVHYVLNDFAKSERGWLSDLLDAVSDAAPYLAKGDDSRF 179
Query: 181 LNHIV 185
L+ +
Sbjct: 180 LSDVA 184
>gi|149907585|ref|ZP_01896332.1| peptidyl-tRNA hydrolase [Moritella sp. PE36]
gi|149809255|gb|EDM69184.1| peptidyl-tRNA hydrolase [Moritella sp. PE36]
Length = 196
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G I+ + +H ++ K+ + + G L+ P
Sbjct: 7 LIVGLANPGQEYSRTRHNAGAWFINELAKWHNTQLREEAKYFGYTARIDVAGQDVRLLVP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + FY++ ++ LV+HD+LDL G + K GG GHNGLK I K
Sbjct: 67 TTFMNLSGKSVSALAKFYRI-DVTQILVVHDELDLPPGVAKFKQGGSHGGHNGLKDIISK 125
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K + RLRIGIG P + +VLG + E+ + ID R + +LAK
Sbjct: 126 MANSKEFYRLRIGIGHPGHKDKVTGYVLGKAQAKEQEQMDAAIDEAVRCIDILAKDGMTK 185
Query: 180 FLNHIVSVR 188
+ + + +
Sbjct: 186 AMTRLHTFK 194
>gi|239832419|ref|ZP_04680748.1| peptidyl-tRNA hydrolase [Ochrobactrum intermedium LMG 3301]
gi|239824686|gb|EEQ96254.1| peptidyl-tRNA hydrolase [Ochrobactrum intermedium LMG 3301]
Length = 254
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 94/190 (49%), Positives = 130/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +LIK
Sbjct: 1 MLLIAGLGNPGPKYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + +VI+D+LDL+ G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSVGEAMRFYKLTPA-DLVVIYDELDLNPGKLRIKTGGGSGGHNGIKSIDS 119
Query: 121 KC-----GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLLGAVADNVAMLARG 179
Query: 176 EDVSFLNHIV 185
ED SF+N +
Sbjct: 180 EDNSFMNRVA 189
>gi|49475909|ref|YP_033950.1| peptidyl-tRNA hydrolase [Bartonella henselae str. Houston-1]
gi|68052957|sp|Q6G2L1|PTH_BARHE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|49238717|emb|CAF27969.1| Peptidyl-tRNA hydrolase [Bartonella henselae str. Houston-1]
Length = 193
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 96/189 (50%), Positives = 134/189 (70%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y NRHNIGFM ID I+ F W KKF AEIS G ++G +T L+K
Sbjct: 1 MWLIAGLGNPGLQYQNNRHNIGFMAIDAIYQSFSFSPWSKKFQAEISTGLINGKKTFLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ E + FYKL +L+N++VI+D+LDL G +R+K GGG+ GHNG+KSI
Sbjct: 61 PQTFMNLSGQAIGEALRFYKL-DLKNFIVIYDELDLPPGRVRVKIGGGNNGHNGIKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG +Y R+R+GIGRP + +HVLGNF+ ++ +L +++ IA+++ LL K F
Sbjct: 120 HCGTDYCRIRLGIGRPNSKELVYQHVLGNFTKSDQEWLPSLLEAIAKNIALLIKGNKCLF 179
Query: 181 LNHIVSVRK 189
+N I K
Sbjct: 180 MNEISQAMK 188
>gi|159896843|ref|YP_001543090.1| aminoacyl-tRNA hydrolase [Herpetosiphon aurantiacus ATCC 23779]
gi|229485507|sp|A9B7I9|PTH_HERA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|159889882|gb|ABX02962.1| Aminoacyl-tRNA hydrolase [Herpetosiphon aurantiacus ATCC 23779]
Length = 206
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y NRHN+GF C+ H K+ A I+EG ++G R L +
Sbjct: 1 MFLIVGLGNPGEKYLNNRHNVGFQCVAEFARRHHLSFDGKRSDARIAEGLVNGQRVALAR 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S++ ++N+YK+ LV++DDLDL FGT++L+ G G G+ SI +
Sbjct: 61 PQTFMNDSGKSVVGLVNWYKIDPASELLVVYDDLDLPFGTIKLRNQGSSGGQRGMNSIIQ 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + RLR GIGRPP+ +I VLGN+++ ER L + D + L
Sbjct: 121 LLGTQKFARLRFGIGRPPEGWEVINFVLGNWNAAERETLPKLYDRAVEACELCLSDGVTK 180
Query: 180 FLNHIV 185
+N +
Sbjct: 181 AMNAVN 186
>gi|241205732|ref|YP_002976828.1| peptidyl-tRNA hydrolase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240859622|gb|ACS57289.1| peptidyl-tRNA hydrolase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 243
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 95/185 (51%), Positives = 127/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH H F W KKF AEI+EG++ G + +LIK
Sbjct: 1 MLIIAGLGNPGGKYAGNRHNIGFMAVDAIHRRHGFSPWSKKFRAEIAEGEVAGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E M FYKL + + I+D+LDL G RLKTGGG GHNG+KS+
Sbjct: 61 PQTFMNLSGESVGEAMRFYKL-QPTDLVAIYDELDLPQGKARLKTGGGHNGHNGIKSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG+ Y+RLR+GIG P + HVLG+F+ ++ +L P++D +A + +L + ED
Sbjct: 120 HCGREYRRLRLGIGHPGIKEMVQNHVLGDFAKADKAWLEPLLDTLADNADMLVRNEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|294813077|ref|ZP_06771720.1| Peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|294325676|gb|EFG07319.1| Peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 212
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 79/191 (41%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLD-----GLR 55
+++ GLGNPG Y NRHN+GFM D + + K A++ EG++ R
Sbjct: 23 WLIVGLGNPGPGYAANRHNVGFMVADLLAERVGGAFKRAPKAQAQVVEGRIGPPGPASRR 82
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L KP +FMNLSG ++ + +FYK+P E + IHD+LD+D+GTLRLK GGGD GHNGL
Sbjct: 83 VVLAKPMSFMNLSGGPVVALRDFYKVPT-ERIVAIHDELDIDYGTLRLKLGGGDNGHNGL 141
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G +Y RLR GIGRPP + VL +FS ER L +D A ++ L
Sbjct: 142 KSMTKAMGPDYHRLRFGIGRPPGRMQVADFVLKDFSGAERKELDYFVDRAADAVEALVTE 201
Query: 176 EDVSFLNHIVS 186
+ S
Sbjct: 202 GLERAQSAYNS 212
>gi|153854682|ref|ZP_01995932.1| hypothetical protein DORLON_01930 [Dorea longicatena DSM 13814]
gi|149752786|gb|EDM62717.1| hypothetical protein DORLON_01930 [Dorea longicatena DSM 13814]
Length = 194
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNP +Y RHN+GF ID + + +K A + +G ++G + +L+K
Sbjct: 1 MFIIAGLGNPTLQYEGTRHNVGFDVIDMLADRYNISVDGRKGRALVGKGIIEGQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+SL E++N+YK+ LVI+DD+ LD G LR++ G GHNG+K+I
Sbjct: 61 PQTYMNLSGESLRELVNYYKIDEEHELLVIYDDISLDVGQLRIRKKGSAGGHNGIKNIIA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R++IG+G P + +VLG+FS +R + D ++ ++ E +
Sbjct: 121 NLGTDVFPRIKIGVGEKPKKYDLADYVLGHFSKEDRELMEEGYDRADHAVGMILNGEIEA 180
Query: 180 FLNHIVSVRK 189
+N K
Sbjct: 181 AMNQYNRKVK 190
>gi|254384996|ref|ZP_05000331.1| peptidyl-tRNA hydrolase [Streptomyces sp. Mg1]
gi|194343876|gb|EDX24842.1| peptidyl-tRNA hydrolase [Streptomyces sp. Mg1]
Length = 196
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 81/190 (42%), Positives = 110/190 (57%), Gaps = 6/190 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD-----GLRT 56
+++ GLGNPG EY NRHNIGFM D + K A++ EG++ R
Sbjct: 8 WLIVGLGNPGAEYAGNRHNIGFMVADLLADRMRGKFKAHKARAQVVEGRMGPPGPANRRV 67
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L KP +FMNLSG + + +FYK+P LE + IHD+LD+D+ TLRLK GGGD GHNGLK
Sbjct: 68 VLAKPMSFMNLSGGPVTALRDFYKVP-LERIVAIHDELDIDYPTLRLKLGGGDNGHNGLK 126
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
S+++ G +Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 127 SMTKSMGPDYHRVRCGIGRPPGRMQVADFVLKDFSSTERKELDWFVDRAADAVECLIAEG 186
Query: 177 DVSFLNHIVS 186
+ S
Sbjct: 187 LERAQSSYNS 196
>gi|254719570|ref|ZP_05181381.1| peptidyl-tRNA hydrolase [Brucella sp. 83/13]
gi|265984578|ref|ZP_06097313.1| peptidyl-tRNA hydrolase [Brucella sp. 83/13]
gi|264663170|gb|EEZ33431.1| peptidyl-tRNA hydrolase [Brucella sp. 83/13]
Length = 250
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 95/190 (50%), Positives = 130/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +L+K
Sbjct: 1 MLLIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKLTPA-DLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDA 119
Query: 121 KC-----GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+R
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLLSAVADNVAMLARR 179
Query: 176 EDVSFLNHIV 185
ED SF+N I
Sbjct: 180 EDNSFMNRIA 189
>gi|329925502|ref|ZP_08280376.1| aminoacyl-tRNA hydrolase [Paenibacillus sp. HGF5]
gi|328939785|gb|EGG36125.1| aminoacyl-tRNA hydrolase [Paenibacillus sp. HGF5]
Length = 187
Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y + RHN+GFM +D + H + K + I+EG + G +T+LIK
Sbjct: 1 MKWIVGLGNPGPNYEKTRHNVGFMALDALAERHGLKFNQNKCKSVIAEGMIGGTKTVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ M++YK+ +LE+ +V++DDLD G +RL+ G GHNG+KSI +
Sbjct: 61 PMTFMNLSGEAVRAYMDYYKV-SLEDMIVVYDDLDTVVGKIRLRYQGSAGGHNGIKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ R+R+GI RP I+ +VLG F ER L +++ +L
Sbjct: 120 HTGTQSFNRVRMGISRPEPGYAIVDYVLGTFPKKEREQLQHMVEETCDALEFSLDHTFEQ 179
Query: 180 FLNHIV 185
+
Sbjct: 180 TMAKFN 185
>gi|307244017|ref|ZP_07526136.1| aminoacyl-tRNA hydrolase [Peptostreptococcus stomatis DSM 17678]
gi|306492541|gb|EFM64575.1| aminoacyl-tRNA hydrolase [Peptostreptococcus stomatis DSM 17678]
Length = 186
Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats.
Identities = 62/186 (33%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNPG +Y RHN GF +D + + K K A I EG++ + +L+K
Sbjct: 1 MYIIVGLGNPGKKYEHTRHNAGFDALDILAEEYGIKIDKIKHKALIGEGRIGSEKVVLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ V FYK+ ++++ +V++DD+DLD G LR++ G HNG+KSI +
Sbjct: 61 PQTYMNLSGESVQSVFQFYKV-DMDHLIVVYDDIDLDIGKLRIRKKGSAGSHNGMKSIIK 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+G+ RP + VL S + + ++ +++ + + +
Sbjct: 120 CLGSQEFPRVRVGVSRPDPNRDLADFVLSRVSKDQAEDMKSGLEKAVKTVEEIIRTDIDM 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNKYN 185
>gi|315498172|ref|YP_004086976.1| peptidyl-tRNA hydrolase [Asticcacaulis excentricus CB 48]
gi|315416184|gb|ADU12825.1| peptidyl-tRNA hydrolase [Asticcacaulis excentricus CB 48]
Length = 202
Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats.
Identities = 83/191 (43%), Positives = 116/191 (60%), Gaps = 6/191 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGL----RT 56
MF+V GLGNPG +Y +NRHNIGFM IDR+ F +KKF +E++EG +D +
Sbjct: 1 MFLVVGLGNPGTQYAKNRHNIGFMFIDRLIDSANFGPVRKKFQSEVAEGTVDTPTGPAKI 60
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+ +KPQTFMNLSG ++LE FYK+ ++ LV HD+LDL G RLK GGG AGHNGL+
Sbjct: 61 LAMKPQTFMNLSGNAVLEAATFYKIKP-DHILVFHDELDLAPGRFRLKMGGGHAGHNGLR 119
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
SI G N+ R R+GIG P + VL +F E ++ + D ++LPL E
Sbjct: 120 SIMGHLGPNFVRGRMGIGHPGQKELVHSWVLSDFYKAE-DWVERLCDACVKALPLALLGE 178
Query: 177 DVSFLNHIVSV 187
++ ++ +
Sbjct: 179 SEKYMTEVMRL 189
>gi|91787187|ref|YP_548139.1| peptidyl-tRNA hydrolase [Polaromonas sp. JS666]
gi|119390976|sp|Q12E01|PTH_POLSJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|91696412|gb|ABE43241.1| peptidyl-tRNA hydrolase [Polaromonas sp. JS666]
Length = 204
Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats.
Identities = 72/187 (38%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG EY RHN GF ID + P K +H +++ L+G L+K
Sbjct: 3 KLFVGLGNPGAEYEATRHNAGFWWIDALSRELQAPLTLDKSYHGQVARTTLNGKTVWLLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN+SG+S+ + F+K+ E LV HD+LD+ G ++LK GG AGHNGL+ I
Sbjct: 63 PLTFMNVSGKSVAALARFFKIAPDE-VLVAHDELDIVPGQVKLKFGGSHAGHNGLRDIHA 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + Y RLRIG+G P A +I VL S R + ID +++P L E
Sbjct: 122 QLGTDDYWRLRIGVGHPGVKAEVINWVLKKPSQEHRVAIEECIDRALKAVPALLAGEMEK 181
Query: 180 FLNHIVS 186
I +
Sbjct: 182 ATMLIHT 188
>gi|83595076|ref|YP_428828.1| peptidyl-tRNA hydrolase [Rhodospirillum rubrum ATCC 11170]
gi|119390994|sp|Q2RMV4|PTH_RHORT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|83577990|gb|ABC24541.1| peptidyl-tRNA hydrolase [Rhodospirillum rubrum ATCC 11170]
Length = 243
Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats.
Identities = 71/186 (38%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG Y NRHN+GFM + + H +++KF A++++GQ+ G R +L+
Sbjct: 1 MKLVVGLGNPGPRYAGNRHNVGFMAVAALARRHGIGPFRRKFQAQVADGQIAGARLLLLA 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN SGQ++ E F+K+ E+ +V+HD+LDL G +++K GGG GHNG++ I
Sbjct: 61 PETFMNASGQAVGEAARFHKIAP-EDIIVLHDELDLAPGKIKVKQGGGAGGHNGIRDIEA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + R+R+GIG P ++ +VLG+F+ E +L P++D +A L+ + F
Sbjct: 120 HLGPAFWRVRLGIGHPGHKDRVLTYVLGDFAKAEEDWLAPMLDAVADHFALMLEGRPADF 179
Query: 181 LNHIVS 186
++ + +
Sbjct: 180 MSKVAA 185
>gi|326790210|ref|YP_004308031.1| peptidyl-tRNA hydrolase [Clostridium lentocellum DSM 5427]
gi|326540974|gb|ADZ82833.1| peptidyl-tRNA hydrolase [Clostridium lentocellum DSM 5427]
Length = 190
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 101/186 (54%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF ID + + K K+ A I E + G R IL+K
Sbjct: 1 MKLIVGLGNPGLQYAATRHNIGFEVIDSLAEAYNIQVTKSKYKALIGEANIKGERVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ M+F+K+ N E VI DD+ L+ G LRL+ G GHNG+KSI
Sbjct: 61 PQTYMNLSGEAVRACMDFHKITN-EEVFVIFDDVSLEVGQLRLRKNGSAGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ RL+ G+G P + +VLG FS + + P + + +
Sbjct: 120 HIGTQDFSRLKFGVGEKPAGWDLANYVLGRFSEDDLKIIGPRFKDAVDATTMFVTDGIDK 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNKYN 185
>gi|239981713|ref|ZP_04704237.1| peptidyl-tRNA hydrolase [Streptomyces albus J1074]
gi|291453573|ref|ZP_06592963.1| peptidyl-tRNA hydrolase [Streptomyces albus J1074]
gi|291356522|gb|EFE83424.1| peptidyl-tRNA hydrolase [Streptomyces albus J1074]
Length = 195
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 78/190 (41%), Positives = 110/190 (57%), Gaps = 6/190 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD-----GLRT 56
++V GLGNPG EY NRHN+GFM D + S K A++ E ++ R
Sbjct: 7 WLVVGLGNPGPEYAANRHNVGFMVADLLASRAGGKFKAHKSRAQVLEARIGAPGPGSRRI 66
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L KPQ++MNLSG + + +FYK+P E + +HD+LD+D+G LRLK GGGD GHNGLK
Sbjct: 67 VLAKPQSYMNLSGGPVTALRDFYKVPT-ERIVAVHDELDIDYGALRLKLGGGDNGHNGLK 125
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
S+++ G +Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 126 SMTKSLGPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELDYFVDRAADAVEALVVAG 185
Query: 177 DVSFLNHIVS 186
+ +
Sbjct: 186 LERAQSSYNA 195
>gi|323340105|ref|ZP_08080370.1| aminoacyl-tRNA hydrolase [Lactobacillus ruminis ATCC 25644]
gi|323092482|gb|EFZ35089.1| aminoacyl-tRNA hydrolase [Lactobacillus ruminis ATCC 25644]
Length = 187
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 79/190 (41%), Positives = 112/190 (58%), Gaps = 5/190 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY E RHN GFM IDR H F K+KF A I++G ++G + IL K
Sbjct: 1 MKLIVGLGNIGKEYDETRHNAGFMTIDRFAEKHAFEFNKQKFDAMIADGIINGEKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ ++++FYKL N E+ L++HDD+DL G LRL+ G GHNG+KSI
Sbjct: 61 PTTYMNESGRSVRQIVDFYKL-NPEDVLIVHDDMDLATGRLRLRQKGSAGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +KRLRIGI P ++ VL FSS +R ++ ++ + +D
Sbjct: 120 HLGTEKFKRLRIGIDHPA-KQKVVDWVLTRFSSDQRTEFDVGMNEAVDAIDDWLENDD-- 176
Query: 180 FLNHIVSVRK 189
F+ + K
Sbjct: 177 FMKTMNRFNK 186
>gi|297844788|ref|XP_002890275.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336117|gb|EFH66534.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 110/193 (56%), Gaps = 6/193 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D + + F A +G + + ++ KP
Sbjct: 88 WLIVGLGNPGKKYQGTRHNVGFEMVDALANAEGISMNTVNFKALFGKGVIGNIPIMMAKP 147
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ ++++FYK+P L+ LV++DDLDL FG LRL GG GHNG++SI ++
Sbjct: 148 QTFMNLSGESVGQIVSFYKIP-LKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 206
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED-- 177
+++ RLRIGIGRPP VL F+ E+ L ++ +L
Sbjct: 207 LKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDYTFQTGIEAIRILLLEGINK 266
Query: 178 -VSFLNHIVSVRK 189
+F+N S+ +
Sbjct: 267 SATFVNTRKSMEQ 279
>gi|254388784|ref|ZP_05004016.1| peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|326441621|ref|ZP_08216355.1| peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
gi|197702503|gb|EDY48315.1| peptidyl-tRNA hydrolase [Streptomyces clavuligerus ATCC 27064]
Length = 199
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 79/191 (41%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLD-----GLR 55
+++ GLGNPG Y NRHN+GFM D + + K A++ EG++ R
Sbjct: 10 WLIVGLGNPGPGYAANRHNVGFMVADLLAERVGGAFKRAPKAQAQVVEGRIGPPGPASRR 69
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L KP +FMNLSG ++ + +FYK+P E + IHD+LD+D+GTLRLK GGGD GHNGL
Sbjct: 70 VVLAKPMSFMNLSGGPVVALRDFYKVPT-ERIVAIHDELDIDYGTLRLKLGGGDNGHNGL 128
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G +Y RLR GIGRPP + VL +FS ER L +D A ++ L
Sbjct: 129 KSMTKAMGPDYHRLRFGIGRPPGRMQVADFVLKDFSGAERKELDYFVDRAADAVEALVTE 188
Query: 176 EDVSFLNHIVS 186
+ S
Sbjct: 189 GLERAQSAYNS 199
>gi|114707022|ref|ZP_01439921.1| peptidyl-tRNA hydrolase [Fulvimarina pelagi HTCC2506]
gi|114537572|gb|EAU40697.1| peptidyl-tRNA hydrolase [Fulvimarina pelagi HTCC2506]
Length = 241
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 91/184 (49%), Positives = 126/184 (68%), Gaps = 2/184 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM +D I F W KKF EISEGQ+ G + +L+K
Sbjct: 1 MILIAGLGNPGPKYAGNRHNIGFMAVDEIARDPAFSPWSKKFSGEISEGQVGGEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E F+K+ ++ +V+HD+LDLD G +++KTGGG+ GHNGL+S
Sbjct: 61 PLTFMNDSGRSVGEAARFFKIEP-KDVIVVHDELDLDPGRVKVKTGGGNGGHNGLRSTDA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K+Y+R+R+GIG P + HVLG+FS +R +L P++ IAR+L L + ED S
Sbjct: 120 HLGTKDYRRMRLGIGHPGRKEAVTPHVLGDFSKADREWLQPLLTTIARNLEPLVRGEDAS 179
Query: 180 FLNH 183
F+N
Sbjct: 180 FMNK 183
>gi|86358630|ref|YP_470522.1| peptidyl-tRNA hydrolase [Rhizobium etli CFN 42]
gi|119390988|sp|Q2K5U1|PTH_RHIEC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|86282732|gb|ABC91795.1| peptidyl-tRNA hydrolase protein [Rhizobium etli CFN 42]
Length = 240
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 93/185 (50%), Positives = 125/185 (67%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGF+ +D IH H F W KKF A I+EG+L G + +LIK
Sbjct: 1 MLIIAGLGNPGSKYAGNRHNIGFLAVDAIHRRHSFSPWSKKFKAAIAEGELGGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E M FYKL + + I+D+LDL G RLKTGGG GHNG+KS+
Sbjct: 61 PQTYMNLSGEAVGEAMRFYKL-QPADLVAIYDELDLPAGKARLKTGGGHGGHNGIKSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P + HVLG+F+ + +L P++D +A + +L + ED
Sbjct: 120 HCGKEYRRLRLGIGHPGVKEMVQNHVLGDFAKADNAWLEPLLDTLADNADMLVRNEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|306844536|ref|ZP_07477125.1| peptidyl-tRNA hydrolase [Brucella sp. BO1]
gi|306275147|gb|EFM56903.1| peptidyl-tRNA hydrolase [Brucella sp. BO1]
Length = 250
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 95/190 (50%), Positives = 130/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +L+K
Sbjct: 1 MLLIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKLTPA-DLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDA 119
Query: 121 KC-----GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+R
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLLGAVADNVAMLARR 179
Query: 176 EDVSFLNHIV 185
ED SF+N I
Sbjct: 180 EDNSFMNRIA 189
>gi|239941865|ref|ZP_04693802.1| peptidyl-tRNA hydrolase [Streptomyces roseosporus NRRL 15998]
gi|291445313|ref|ZP_06584703.1| peptidyl-tRNA hydrolase [Streptomyces roseosporus NRRL 15998]
gi|291348260|gb|EFE75164.1| peptidyl-tRNA hydrolase [Streptomyces roseosporus NRRL 15998]
Length = 197
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 76/191 (39%), Positives = 116/191 (60%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLD-----GLR 55
+++ GLGNPG +Y NRHN+GFM D + + + +K A++ EG++ R
Sbjct: 8 WLIVGLGNPGPDYAANRHNVGFMVADLLATRIGGKFKRAQKAQAQVVEGRIGPPGPASRR 67
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L+KP ++MNLSG + + +FYK+P ++ +V+HD+LD+D+G LRLK GGGD GHNGL
Sbjct: 68 VVLVKPMSYMNLSGGPVTALRDFYKVPT-DHVVVVHDELDVDYGALRLKLGGGDNGHNGL 126
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G +Y R+R GIGRPP + VL +FSS ER L ++D A ++ L
Sbjct: 127 KSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECLLAE 186
Query: 176 EDVSFLNHIVS 186
+ S
Sbjct: 187 GLERAQSAYNS 197
>gi|170755332|ref|YP_001783180.1| peptidyl-tRNA hydrolase [Clostridium botulinum B1 str. Okra]
gi|229470295|sp|B1IGZ7|PTH_CLOBK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169120544|gb|ACA44380.1| peptidyl-tRNA hydrolase [Clostridium botulinum B1 str. Okra]
Length = 189
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 114/189 (60%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGN G EY + RHNIGF +D I + ++KF EG++ + IL+K
Sbjct: 1 MYLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NFYK+ + EN +VI+DD+ +D G LR++ G GHNG+K+I +
Sbjct: 61 PSTYMNLSGESVIEAANFYKI-DKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+GIG+P +++ +VLG FS +R + ++ A++ + +
Sbjct: 120 HLNSDIFPRVRVGIGQP--DENVVNYVLGKFSKDQREIIDKVLAMSAKACISIVEDGVTE 177
Query: 180 FLNHIVSVR 188
+N V+
Sbjct: 178 AMNKYNGVK 186
>gi|168183620|ref|ZP_02618284.1| aminoacyl-tRNA hydrolase [Clostridium botulinum Bf]
gi|237797001|ref|YP_002864553.1| peptidyl-tRNA hydrolase [Clostridium botulinum Ba4 str. 657]
gi|259535145|sp|C3KW96|PTH_CLOB6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|182673238|gb|EDT85199.1| aminoacyl-tRNA hydrolase [Clostridium botulinum Bf]
gi|229262516|gb|ACQ53549.1| aminoacyl-tRNA hydrolase [Clostridium botulinum Ba4 str. 657]
Length = 189
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 114/189 (60%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGN G EY + RHNIGF +D I + ++KF EG++ + IL+K
Sbjct: 1 MYLVVGLGNIGKEYKQTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NFYK+ + EN +VI+DD+ +D G LR++ G GHNG+K+I +
Sbjct: 61 PSTYMNLSGESVIEAANFYKI-DKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+GIG+P +++ +VLG FS +R + ++ A++ + +
Sbjct: 120 HLNSDIFPRVRVGIGQP--DENVVNYVLGKFSKDQREIIEKVLAMSAKACISIVEDGVTE 177
Query: 180 FLNHIVSVR 188
+N V+
Sbjct: 178 AMNKYNGVK 186
>gi|221068919|ref|ZP_03545024.1| Aminoacyl-tRNA hydrolase [Comamonas testosteroni KF-1]
gi|220713942|gb|EED69310.1| Aminoacyl-tRNA hydrolase [Comamonas testosteroni KF-1]
Length = 212
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 3/189 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG EY + RHN GF ID + ++ + ++ + G L++
Sbjct: 3 KLFVGLGNPGPEYEDTRHNAGFWWIDALARELKVSLVPERSYWGLMARTSIHGQTVWLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ + F+K+ E LV+HD+LD + G ++LK GG GHNGL+ I
Sbjct: 63 PQTFMNLSGKSVGALARFFKI-QPEEILVVHDELDFEPGVVKLKLGGSHGGHNGLRDIHA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G NY RLR+GIG P + VL + + + I + ++ P + +
Sbjct: 122 QLGSPNYWRLRVGIGHPGHKGEVASWVLKKPAPDQLKLIEDAIAHSLKAWPEMVAGQMDK 181
Query: 180 FLNHIVSVR 188
I + +
Sbjct: 182 ATLAIHTTK 190
>gi|254491100|ref|ZP_05104281.1| peptidyl-tRNA hydrolase [Methylophaga thiooxidans DMS010]
gi|224463613|gb|EEF79881.1| peptidyl-tRNA hydrolase [Methylophaga thiooxydans DMS010]
Length = 190
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 75/187 (40%), Positives = 113/187 (60%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+I+AGLGNPG +Y RHN+GF +D++ + ++H ++ + LD + L+K
Sbjct: 4 WIIAGLGNPGSQYEGTRHNVGFWLLDQLARELGANFTVQNRYHGQLVQCSLDEHKVYLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQS+ + NFYK+P L+N LV+HD+LDL+ G +RLK GG GHNGL+ I
Sbjct: 64 PLTFMNRSGQSVAALANFYKIP-LQNILVVHDELDLEPGVVRLKRDGGHGGHNGLRDIIA 122
Query: 121 K-CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ GKN+ R R+GIG P + + +VL S +R + IDN+ + LP + +
Sbjct: 123 QTGGKNFLRCRLGIGHPGHSKLVSDYVLSKPSPTDRQQVETAIDNVLQILPDVLSDKLDK 182
Query: 180 FLNHIVS 186
+N + S
Sbjct: 183 AMNWLHS 189
>gi|302383774|ref|YP_003819597.1| peptidyl-tRNA hydrolase [Brevundimonas subvibrioides ATCC 15264]
gi|302194402|gb|ADL01974.1| peptidyl-tRNA hydrolase [Brevundimonas subvibrioides ATCC 15264]
Length = 204
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 73/184 (39%), Positives = 114/184 (61%), Gaps = 1/184 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM D I F + KF + I EG+++G + +L+K
Sbjct: 1 MIIIAGLGNPGPKYQHNRHNIGFMAADEIARRWRFGPERAKFQSVIREGEVEGTKVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG ++ E FYK+ + ++ HD++DL G R+K GGG AG NG++S+
Sbjct: 61 PQTFMNNSGNAVGEAARFYKIAPA-DVIIFHDEIDLAPGRFRMKKGGGAAGQNGIRSLIS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ G +++R R+G+G P + ++ HVLG+F E+ +L +++ A +LP +D +
Sbjct: 120 QLGPDFRRARMGVGHPGEAHLVMPHVLGDFHKAEQPWLQALLNACADALPFALAGDDERY 179
Query: 181 LNHI 184
+
Sbjct: 180 QGEV 183
>gi|300790049|ref|YP_003770340.1| peptidyl-tRNA hydrolase, PTH1 family [Amycolatopsis mediterranei
U32]
gi|299799563|gb|ADJ49938.1| peptidyl-tRNA hydrolase, PTH1 family [Amycolatopsis mediterranei
U32]
Length = 197
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 79/185 (42%), Positives = 111/185 (60%), Gaps = 2/185 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++AGLGNPG +Y NRHN+GFM +D + + K E+ EG+L G R +L+KP+
Sbjct: 13 LLAGLGNPGPQYAGNRHNVGFMVLDELAARIGGKFKTHKSGGEVLEGRLAGRRVVLVKPR 72
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
++MNLSG + FYK+ +V+HD+LD+DFGTL+LK GGGD GHNGL+SIS+
Sbjct: 73 SYMNLSGGPVAGAAKFYKIEP-SGVVVVHDELDVDFGTLKLKFGGGDNGHNGLRSISKSL 131
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G ++Y R+R GIGRPP VL +FS+ ER L +D A + L +
Sbjct: 132 GTRDYYRVRFGIGRPPGRQDPADFVLKDFSTVERKELPLEVDRCADATEALIGTGLAAAQ 191
Query: 182 NHIVS 186
N +
Sbjct: 192 NSFHA 196
>gi|153940404|ref|YP_001392894.1| peptidyl-tRNA hydrolase [Clostridium botulinum F str. Langeland]
gi|166199327|sp|A7GJD4|PTH_CLOBL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|152936300|gb|ABS41798.1| aminoacyl-tRNA hydrolase [Clostridium botulinum F str. Langeland]
gi|295320871|gb|ADG01249.1| aminoacyl-tRNA hydrolase [Clostridium botulinum F str. 230613]
Length = 189
Score = 244 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 114/189 (60%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGN G EY + RHNIGF +D I + ++KF EG++ + IL+K
Sbjct: 1 MYLVVGLGNIGKEYKKTRHNIGFDVVDIIAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NFYK+ + EN +VI+DD+ +D G LR++ G GHNG+K+I +
Sbjct: 61 PSTYMNLSGESVIEAANFYKI-DKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+GIG+P +++ +VLG FS +R + ++ A++ + +
Sbjct: 120 HLNSDIFPRVRVGIGQP--DENVVNYVLGKFSKDQREIIEKVLAMSAKACISIVEDGVTE 177
Query: 180 FLNHIVSVR 188
+N V+
Sbjct: 178 AMNKYNGVK 186
>gi|320010339|gb|ADW05189.1| peptidyl-tRNA hydrolase [Streptomyces flavogriseus ATCC 33331]
Length = 197
Score = 244 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 77/191 (40%), Positives = 113/191 (59%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLD-----GLR 55
+++ GLGNPG EY NRHN+GFM D + + +K A++ EG++ R
Sbjct: 8 WLIVGLGNPGPEYAANRHNVGFMVADLLAERMGGKFKRAQKAQAQVLEGRIGPPGPASRR 67
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L KP ++MNLSG + + +FYK+P ++ + +HD+LD+DFG LRLK GGGD GHNGL
Sbjct: 68 VVLAKPMSYMNLSGGPVTALRDFYKVPT-DHVVAVHDELDIDFGMLRLKLGGGDNGHNGL 126
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G +Y R+R GIGRPP + VL +FSS ER L ++D A ++ L
Sbjct: 127 KSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELAYLVDRSADAVESLLAE 186
Query: 176 EDVSFLNHIVS 186
+ S
Sbjct: 187 GLERAQSAYNS 197
>gi|255524038|ref|ZP_05391000.1| Aminoacyl-tRNA hydrolase [Clostridium carboxidivorans P7]
gi|296186895|ref|ZP_06855296.1| peptidyl-tRNA hydrolase [Clostridium carboxidivorans P7]
gi|255512325|gb|EET88603.1| Aminoacyl-tRNA hydrolase [Clostridium carboxidivorans P7]
gi|296048609|gb|EFG88042.1| peptidyl-tRNA hydrolase [Clostridium carboxidivorans P7]
Length = 187
Score = 244 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 111/189 (58%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGN G +Y RHN+GF ID + + ++KF EG + + IL+K
Sbjct: 1 MFLIVGLGNIGKQYEHTRHNVGFDIIDLVSDKYNISINREKFKGMYGEGSIASEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ EV+NFYK+ N E +V++DD+ L+ G LR++ G GHNG+KSI
Sbjct: 61 PSTYMNLSGESIREVVNFYKISN-EQVIVLYDDISLEVGRLRIREKGSAGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G+P + ++ HVLG F+ +R ++ D ++ + K
Sbjct: 120 NLGTDVFPRIKVGVGQP--KSELVSHVLGRFNVEDREKVIKAFDVSVDAVEHIIKYGVDE 177
Query: 180 FLNHIVSVR 188
+N S +
Sbjct: 178 AMNKFNSFK 186
>gi|114565645|ref|YP_752799.1| aminoacyl-tRNA hydrolase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|119391030|sp|Q0B0S6|PTH_SYNWW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|114336580|gb|ABI67428.1| peptidyl-tRNA hydrolase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 183
Score = 244 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 110/186 (59%), Gaps = 4/186 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF ++ + H + ++ A + +++ + +L+K
Sbjct: 1 MKMLVGLGNPGKKYSHTRHNIGFKVLEELARRHQIEKEESRYDAIVGHLRINQEKLLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + N++KL L LV++DD+DL GT+R++ GG GH G++SI E
Sbjct: 61 PLTFMNLSGKAVRPLFNWFKL-ELSELLVVYDDMDLPPGTVRIRASGGTGGHKGMQSICE 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ R+RIGIGRPP A I VLG FS E+ + I+ A ++ K +
Sbjct: 120 SLGSRDFPRIRIGIGRPPGGA--IDWVLGEFSESEKPLMQDAIEKAASAIECWVKSGIDA 177
Query: 180 FLNHIV 185
+N
Sbjct: 178 SMNAYN 183
>gi|308066874|ref|YP_003868479.1| Peptidyl-tRNA hydrolase (PTH) [Paenibacillus polymyxa E681]
gi|305856153|gb|ADM67941.1| Peptidyl-tRNA hydrolase (PTH) [Paenibacillus polymyxa E681]
Length = 186
Score = 244 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y + RHN+GFM +D + S H + K A I EG + G++T+LIK
Sbjct: 1 MKWIVGLGNPGPQYEKTRHNVGFMALDALASRHNIQINQSKCKALIGEGHIGGVKTVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+SL M++YK ++E+ +V++DDLD + G +RL+ G GHNG+KSI +
Sbjct: 61 PMTYMNLSGESLRAYMDYYK-ADMEDLVVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ R+R+GI RP I+ +VLG F E+ L +I++ +L
Sbjct: 120 HTGTQSFNRIRMGISRPEPGHAIVDYVLGTFPKKEKDLLAGMIEDTCNALEYSLSHPFER 179
Query: 180 FLNHIV 185
+
Sbjct: 180 TMAEFN 185
>gi|261403913|ref|YP_003240154.1| peptidyl-tRNA hydrolase [Paenibacillus sp. Y412MC10]
gi|261280376|gb|ACX62347.1| peptidyl-tRNA hydrolase [Paenibacillus sp. Y412MC10]
Length = 187
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y + RHN+GFM +D + H + K + I+EG + G +T+LIK
Sbjct: 1 MKWIVGLGNPGPNYEKTRHNVGFMALDALAERHGLKFNQNKCKSVIAEGMIGGTKTVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ M++YK+ +LE+ +V++DDLD G +RL+ G GHNG+KSI +
Sbjct: 61 PMTFMNLSGEAVRAYMDYYKV-SLEDMIVVYDDLDTVVGKIRLRYQGSAGGHNGIKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ R+R+GI RP I+ +VLG F ER L +++ +L
Sbjct: 120 HTGTQSFNRVRMGISRPEPGYAIVDYVLGTFPKKEREQLQHMVEETCDALEFSLGHTFEQ 179
Query: 180 FLNHIV 185
+
Sbjct: 180 TMAKFN 185
>gi|326387511|ref|ZP_08209119.1| peptidyl-tRNA hydrolase [Novosphingobium nitrogenifigens DSM 19370]
gi|326208015|gb|EGD58824.1| peptidyl-tRNA hydrolase [Novosphingobium nitrogenifigens DSM 19370]
Length = 189
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 80/189 (42%), Positives = 115/189 (60%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHN+GFM +D I H F +KKF + +G++ R IL+K
Sbjct: 1 MQLWVGLGNPGPQYALNRHNVGFMALDVIADVHRFGPVQKKFQGWVQDGRIGTERVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E M F+KL + V HD+LDL +++K GGG AGHNGL+SI
Sbjct: 61 PATFMNESGRAVGEAMRFFKLTTA-DLTVFHDELDLAPFKVKVKIGGGTAGHNGLRSIER 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
++R+R+GIG P + HVLGNF+ E L ++ +ARS LA+ +DV F
Sbjct: 120 HADAAFRRVRLGIGHPGHKDRVTGHVLGNFAKSEGDDLTDMLGAVARSAEWLARGDDVRF 179
Query: 181 LNHIVSVRK 189
+N + ++
Sbjct: 180 MNDVALAQQ 188
>gi|328882995|emb|CCA56234.1| Peptidyl-tRNA hydrolase [Streptomyces venezuelae ATCC 10712]
Length = 198
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 80/191 (41%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLD-----GLR 55
+++ GLGNPG EY NRHNIGFM +D + + K A++ EG++ R
Sbjct: 9 WLIVGLGNPGPEYAANRHNIGFMVVDLLAERMRGSFKRAGKAQAQVVEGRMGPPGPASRR 68
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
IL KP ++MNLSG + + +FYK+P N + +HD+LD+D+G LRLK GGGD GHNGL
Sbjct: 69 VILAKPMSYMNLSGGPVTALRDFYKVPTA-NVVAVHDELDIDYGVLRLKIGGGDNGHNGL 127
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G Y R+R GIGRPP + VL +FSS ER L +D A S+ L
Sbjct: 128 KSMTKAMGAEYHRVRCGIGRPPGRMQVADFVLKDFSSTERKDLDWFVDRAADSVECLVAE 187
Query: 176 EDVSFLNHIVS 186
+ S
Sbjct: 188 GLERAQSAYNS 198
>gi|257899965|ref|ZP_05679618.1| peptidyl-tRNA hydrolase [Enterococcus faecium Com15]
gi|257837877|gb|EEV62951.1| peptidyl-tRNA hydrolase [Enterococcus faecium Com15]
Length = 186
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HNIGFM +D+I H K F AE++E +G + +L+K
Sbjct: 1 MKMIVGLGNPGTKYQYTKHNIGFMVVDQIAREHQATFKKNPFEAEVAEFFHNGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M ++ + E +VI+DDLDL G +RL+ G GHNG+KSI
Sbjct: 61 PQTFMNESGRAVGPLMTYFGIYP-EELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
N + R+++GIGRP +++HVL FS + + I +++ L + V
Sbjct: 120 HLNTNVFDRIKVGIGRPEGKKTVVQHVLSPFSKENQPLIEESIFQSVKAVEYLIEGHSFV 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 DAMNQFN 186
>gi|326390844|ref|ZP_08212396.1| peptidyl-tRNA hydrolase [Thermoanaerobacter ethanolicus JW 200]
gi|325993103|gb|EGD51543.1| peptidyl-tRNA hydrolase [Thermoanaerobacter ethanolicus JW 200]
Length = 184
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 77/186 (41%), Positives = 111/186 (59%), Gaps = 4/186 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG EY RHNIGFM ID + K KF + + EG G + IL+K
Sbjct: 1 MYVIAGLGNPGKEYEGTRHNIGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG++L + +NFYK+P LEN +VI+DD DLD G +R++T G GHNG+KSI
Sbjct: 61 PQTFMNSSGEALYDAVNFYKIP-LENVIVIYDDKDLDVGKIRIRTKGSSGGHNGMKSIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+RIGIG+P ++ HVLG F E+ + + A ++ + +
Sbjct: 120 LLNSEEFPRVRIGIGKP--QEDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEH 177
Query: 180 FLNHIV 185
++
Sbjct: 178 SMSKFN 183
>gi|111225610|ref|YP_716404.1| peptidyl-tRNA hydrolase [Frankia alni ACN14a]
gi|123142574|sp|Q0RCD6|PTH_FRAAA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|111153142|emb|CAJ64889.1| Peptidyl-tRNA hydrolase (PTH) [Frankia alni ACN14a]
Length = 197
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 76/187 (40%), Positives = 113/187 (60%), Gaps = 2/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG Y NRHN GFM +D + + A+++E +L G R IL +P
Sbjct: 11 WLVVGLGNPGPGYAGNRHNAGFMVVDLLAERAGSRLKSHRSRADVAEVRLAGTRAILARP 70
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+FMNLSG + V FYK+ + +V+HD+LD+ FG++RLK GGGD GHNGL+SIS
Sbjct: 71 LSFMNLSGGPVSAVRTFYKI-DPARVIVVHDELDIPFGSVRLKRGGGDNGHNGLRSISSA 129
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y R+R+GIGRPP +VL +F++ ER L ++++ A S+ +L
Sbjct: 130 LGTRDYLRVRVGIGRPPGRMDPADYVLRDFAAAERRELPLLLEHSADSVEMLITDGLEPT 189
Query: 181 LNHIVSV 187
N ++
Sbjct: 190 QNRYHAL 196
>gi|237736260|ref|ZP_04566741.1| peptidyl-tRNA hydrolase [Fusobacterium mortiferum ATCC 9817]
gi|229421608|gb|EEO36655.1| peptidyl-tRNA hydrolase [Fusobacterium mortiferum ATCC 9817]
Length = 186
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 75/186 (40%), Positives = 112/186 (60%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG++Y + RHNIGF I+ + K+KF ISE +DG + + +K
Sbjct: 1 MKLIVGLGNPGNKYEKTRHNIGFEVINHLQKELSITNEKEKFQGLISEKNIDGEKVLFLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG S++EV+NFYKL + +VI+DD+DL G LR+K G GHNG+KSI
Sbjct: 61 PQTFMNLSGNSIIEVINFYKLNPKTDLVVIYDDMDLPVGKLRVKEKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR-SLPLLAKREDVS 179
G + R++ GIG+P + I VLG FS E+ + +I+N ++ ++ ++ E
Sbjct: 121 HLGDEFLRIKCGIGKP--KDNTIDFVLGQFSKSEQEEVTMMIENASKCAIDIIQDIEIGK 178
Query: 180 FLNHIV 185
+
Sbjct: 179 IMQKYN 184
>gi|251794073|ref|YP_003008804.1| peptidyl-tRNA hydrolase [Paenibacillus sp. JDR-2]
gi|247541699|gb|ACS98717.1| peptidyl-tRNA hydrolase [Paenibacillus sp. JDR-2]
Length = 186
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 66/186 (35%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y RHN+GFM ID + + K A I EG + G + +LIK
Sbjct: 1 MKWIVGLGNPGTTYQSTRHNVGFMVIDELARRWNIQVTQSKCKALIGEGNVQGTKVVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ M+++K +LE+ L+++DD+D + G +RL+ G GHNG+KS+ +
Sbjct: 61 PMTYMNLSGESVRGFMDYFK-ADLEDGLIVYDDMDTEVGKVRLRYQGSAGGHNGIKSLIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+G+ RP +I +VL NF E+ L +I+ ++ K +
Sbjct: 120 HLGTQQFNRIRMGVSRPQPGRNIADYVLDNFPKSEQEALKSMIEQACDAVEYSLKASFDN 179
Query: 180 FLNHIV 185
+
Sbjct: 180 TMAKFN 185
>gi|256061589|ref|ZP_05451730.1| peptidyl-tRNA hydrolase [Brucella neotomae 5K33]
gi|261325596|ref|ZP_05964793.1| peptidyl-tRNA hydrolase [Brucella neotomae 5K33]
gi|261301576|gb|EEY05073.1| peptidyl-tRNA hydrolase [Brucella neotomae 5K33]
Length = 250
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 95/190 (50%), Positives = 130/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +L+K
Sbjct: 1 MLLIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKLTPA-DLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDA 119
Query: 121 KC-----GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+R
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLMGAVADNVAMLARR 179
Query: 176 EDVSFLNHIV 185
ED SF+N I
Sbjct: 180 EDNSFMNRIA 189
>gi|149184485|ref|ZP_01862803.1| peptidyl-tRNA hydrolase [Erythrobacter sp. SD-21]
gi|148831805|gb|EDL50238.1| peptidyl-tRNA hydrolase [Erythrobacter sp. SD-21]
Length = 189
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 79/185 (42%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I GLGNPG +Y +RHNIGFM D + H F +KKF + EG++ G + +L+K
Sbjct: 1 MQIWTGLGNPGPQYAMHRHNIGFMVCDALAEIHGFGPVQKKFSGWVQEGRIGGEKIVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ E M FYKL ++E+ V HD+LDL ++++ GGG AGHNGL+SI++
Sbjct: 61 PATYMNESGRAVGEAMRFYKL-DIEDLTVFHDELDLAPFKVKVRRGGGLAGHNGLRSINQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++R+RIGIG P + HVLGN++ E L ++ + LA +DV F
Sbjct: 120 HLGPDFRRVRIGIGHPGSKDRVTGHVLGNYAKSEMDALADMLGAMGAEAEWLATGDDVRF 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNDIA 184
>gi|134096055|ref|YP_001101130.1| peptidyl-tRNA hydrolase [Herminiimonas arsenicoxydans]
gi|133739958|emb|CAL63009.1| peptidyl-tRNA hydrolase (PTH) [Herminiimonas arsenicoxydans]
Length = 196
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 70/193 (36%), Positives = 100/193 (51%), Gaps = 7/193 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF--HFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D + + + K+ A ++ + G L++
Sbjct: 5 LIVGLGNPGQEYEQTRHNAGFWLVDELARATPRCTLSRESKYSALAAKTAIAGQEVWLLE 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SGQS+ + FYK+ E LV HD+LDL G +LK GG GHNGLK I+
Sbjct: 65 PQTFMNRSGQSVGALARFYKILPDE-ILVAHDELDLPPGIAKLKKGGSSGGHNGLKDITA 123
Query: 121 KCG-KNYKRLRIGIGRPPD---TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G ++Y RLRIGIG P ++ VL E+ + I +PLL +
Sbjct: 124 ALGTQDYWRLRIGIGHPRTLNLNQAVVDFVLHRPRKEEQPLIDEAIAKSLSIIPLLCEGN 183
Query: 177 DVSFLNHIVSVRK 189
+ + +V K
Sbjct: 184 FNAAAMKLHTVEK 196
>gi|99080055|ref|YP_612209.1| peptidyl-tRNA hydrolase [Ruegeria sp. TM1040]
gi|119391009|sp|Q1GK69|PTH_SILST RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|99036335|gb|ABF62947.1| peptidyl-tRNA hydrolase [Ruegeria sp. TM1040]
Length = 248
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 82/185 (44%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D+I S H F WK KF A++SEG L G + IL+K
Sbjct: 1 MKLFVGLGNPGAKYAGNRHNIGFMALDQIASDHGFSPWKSKFQAQMSEGTLSGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SGQS+ E + F+KL + +V HD+LDL R+K GGG AGHNGL+SI
Sbjct: 61 PQTFMNNSGQSVGEALRFFKLTPA-DVVVFHDELDLAPSKCRVKNGGGHAGHNGLRSIHA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F ++ +L ++ ++ LA + F
Sbjct: 120 HIGADYGRVRLGVGHPGHKDAVAGYVLRDFPKADQGWLDDLMRGLSDGAAALATGDSGRF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|163741698|ref|ZP_02149088.1| peptidyl-tRNA hydrolase [Phaeobacter gallaeciensis 2.10]
gi|161384871|gb|EDQ09250.1| peptidyl-tRNA hydrolase [Phaeobacter gallaeciensis 2.10]
Length = 159
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 82/160 (51%), Positives = 105/160 (65%), Gaps = 1/160 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D+I S H F WK KF A+ISEG L + +L+K
Sbjct: 1 MKLFVGLGNPGAKYAGNRHNIGFMALDQIASDHGFSPWKSKFQAQISEGVLGRTKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + V+HD+LDL G R+K GGG AGHNGL+SI
Sbjct: 61 PQTFMNLSGQSVGEAMRFYKLTPA-DVTVLHDELDLAPGKARVKQGGGHAGHNGLRSIHS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLP 160
G +Y R+R+GIG P + +VL +F+ + +L
Sbjct: 120 HIGADYGRVRLGIGHPGHKDAVAGYVLRDFAKADEAWLDD 159
>gi|134097415|ref|YP_001103076.1| peptidyl-tRNA hydrolase [Saccharopolyspora erythraea NRRL 2338]
gi|291004595|ref|ZP_06562568.1| peptidyl-tRNA hydrolase [Saccharopolyspora erythraea NRRL 2338]
gi|133910038|emb|CAM00150.1| peptidyl-tRNA hydrolase [Saccharopolyspora erythraea NRRL 2338]
Length = 191
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 82/184 (44%), Positives = 110/184 (59%), Gaps = 2/184 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG Y NRHNIGF+ D + + K AEI EG+L G+R +L KP+
Sbjct: 9 LIVGLGNPGPRYEGNRHNIGFLVADELAARVGGKFKAHKSGAEIVEGRLGGVRAVLAKPR 68
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
+FMNLSG + FYK+ + +VIHD+LDL +GT+RLK GGG+ GHNGL+SIS+
Sbjct: 69 SFMNLSGGPVAGAAKFYKV-QPGSLIVIHDELDLPYGTVRLKRGGGENGHNGLRSISKSL 127
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G K+Y R+R GI RPP +VL +FS ER L +D A ++ LAK +
Sbjct: 128 GTKDYLRVRFGIDRPPGRMDPADYVLKDFSGAERKELAYFVDLCADAVESLAKEGLEAAQ 187
Query: 182 NHIV 185
N
Sbjct: 188 NRFH 191
>gi|257888640|ref|ZP_05668293.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,141,733]
gi|257897405|ref|ZP_05677058.1| peptidyl-tRNA hydrolase [Enterococcus faecium Com12]
gi|257824694|gb|EEV51626.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,141,733]
gi|257833970|gb|EEV60391.1| peptidyl-tRNA hydrolase [Enterococcus faecium Com12]
Length = 186
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HNIGFM +D+I H K F AE++E +G + +L+K
Sbjct: 1 MKMIVGLGNPGTKYQYTKHNIGFMVVDQIAREHQAAFKKNPFEAEVAEFFHNGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M ++ + E +VI+DDLDL G +RL+ G GHNG+KSI
Sbjct: 61 PQTFMNESGRAVGPLMTYFGIYP-EELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
N + R+++GIGRP +++HVL FS + + I +++ L + V
Sbjct: 120 HLNTNVFDRIKVGIGRPEGKKTVVQHVLSPFSKENQPLIEESIFQSVKAVEYLIEGHSFV 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 DAMNQFN 186
>gi|254293129|ref|YP_003059152.1| peptidyl-tRNA hydrolase [Hirschia baltica ATCC 49814]
gi|254041660|gb|ACT58455.1| peptidyl-tRNA hydrolase [Hirschia baltica ATCC 49814]
Length = 230
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 81/192 (42%), Positives = 122/192 (63%), Gaps = 6/192 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL---DGLRT- 56
M ++ GLGNPG +Y NRHNIGFM ID I H F WK KF +ISEG L +G R
Sbjct: 26 MLLLVGLGNPGDQYKGNRHNIGFMAIDAIADMHGFSPWKTKFQGKISEGFLTDANGGRVK 85
Query: 57 -ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L+KP TF N SG+S+ E MNF+K+ + + ++ HD++DL G +R+K GGG +G+NG+
Sbjct: 86 TLLLKPTTFYNDSGRSVGEAMNFFKI-SADQTVIFHDEIDLAPGRVRMKIGGGHSGNNGM 144
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+SI + K+ +R R+G+G P D + + HVL +F+ E +L ++D AR++ LA
Sbjct: 145 RSIMAQASKDVRRTRLGVGHPGDKSRVQGHVLSDFAKSEAKWLDDMLDACARAIHFLAAG 204
Query: 176 EDVSFLNHIVSV 187
+D F ++ +
Sbjct: 205 DDERFQAEVMRL 216
>gi|163843792|ref|YP_001628196.1| peptidyl-tRNA hydrolase [Brucella suis ATCC 23445]
gi|189038281|sp|B0CHX5|PTH_BRUSI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|163674515|gb|ABY38626.1| peptidyl-tRNA hydrolase [Brucella suis ATCC 23445]
Length = 250
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 95/190 (50%), Positives = 130/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +L+K
Sbjct: 1 MLLIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKLTPA-DLVVIYDELDLVPGKLRIKTGGGPGGHNGIKSIDA 119
Query: 121 KC-----GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+R
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLMGAVADNVAMLARR 179
Query: 176 EDVSFLNHIV 185
ED SF+N I
Sbjct: 180 EDNSFMNRIA 189
>gi|17986763|ref|NP_539397.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 1 str. 16M]
gi|23502404|ref|NP_698531.1| peptidyl-tRNA hydrolase [Brucella suis 1330]
gi|148558902|ref|YP_001259413.1| peptidyl-tRNA hydrolase [Brucella ovis ATCC 25840]
gi|161619481|ref|YP_001593368.1| peptidyl-tRNA hydrolase [Brucella canis ATCC 23365]
gi|225627978|ref|ZP_03786014.1| peptidyl-tRNA hydrolase [Brucella ceti str. Cudo]
gi|225853015|ref|YP_002733248.1| peptidyl-tRNA hydrolase [Brucella melitensis ATCC 23457]
gi|254694212|ref|ZP_05156040.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 3 str. Tulya]
gi|254702255|ref|ZP_05164083.1| peptidyl-tRNA hydrolase [Brucella suis bv. 5 str. 513]
gi|254704789|ref|ZP_05166617.1| peptidyl-tRNA hydrolase [Brucella suis bv. 3 str. 686]
gi|254708203|ref|ZP_05170031.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis M163/99/10]
gi|254710572|ref|ZP_05172383.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis B2/94]
gi|254714755|ref|ZP_05176566.1| peptidyl-tRNA hydrolase [Brucella ceti M644/93/1]
gi|254717817|ref|ZP_05179628.1| peptidyl-tRNA hydrolase [Brucella ceti M13/05/1]
gi|256032067|ref|ZP_05445681.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis M292/94/1]
gi|256045158|ref|ZP_05448057.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 1 str. Rev.1]
gi|256160263|ref|ZP_05457957.1| peptidyl-tRNA hydrolase [Brucella ceti M490/95/1]
gi|256255469|ref|ZP_05461005.1| peptidyl-tRNA hydrolase [Brucella ceti B1/94]
gi|256263505|ref|ZP_05466037.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 2 str. 63/9]
gi|256369952|ref|YP_003107463.1| peptidyl-tRNA hydrolase [Brucella microti CCM 4915]
gi|260169202|ref|ZP_05756013.1| peptidyl-tRNA hydrolase [Brucella sp. F5/99]
gi|260565242|ref|ZP_05835726.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 1 str. 16M]
gi|260565968|ref|ZP_05836438.1| peptidyl-tRNA hydrolase [Brucella suis bv. 4 str. 40]
gi|261214518|ref|ZP_05928799.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 3 str. Tulya]
gi|261219663|ref|ZP_05933944.1| peptidyl-tRNA hydrolase [Brucella ceti M13/05/1]
gi|261222674|ref|ZP_05936955.1| peptidyl-tRNA hydrolase [Brucella ceti B1/94]
gi|261315707|ref|ZP_05954904.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis M163/99/10]
gi|261318145|ref|ZP_05957342.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis B2/94]
gi|261322552|ref|ZP_05961749.1| peptidyl-tRNA hydrolase [Brucella ceti M644/93/1]
gi|261752825|ref|ZP_05996534.1| peptidyl-tRNA hydrolase [Brucella suis bv. 5 str. 513]
gi|261755483|ref|ZP_05999192.1| peptidyl-tRNA hydrolase [Brucella suis bv. 3 str. 686]
gi|261758714|ref|ZP_06002423.1| peptidyl-tRNA hydrolase [Brucella sp. F5/99]
gi|265989176|ref|ZP_06101733.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis M292/94/1]
gi|265991590|ref|ZP_06104147.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 1 str. Rev.1]
gi|265998638|ref|ZP_06111195.1| peptidyl-tRNA hydrolase [Brucella ceti M490/95/1]
gi|54038904|sp|P65864|PTH_BRUSU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54041590|sp|P65863|PTH_BRUME RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199311|sp|A5VRR6|PTH_BRUO2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038280|sp|A9M6K1|PTH_BRUC2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783856|sp|C0REH2|PTH_BRUMB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|17982391|gb|AAL51661.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 1 str. 16M]
gi|23348390|gb|AAN30446.1| peptidyl-tRNA hydrolase [Brucella suis 1330]
gi|148370159|gb|ABQ60138.1| peptidyl-tRNA hydrolase [Brucella ovis ATCC 25840]
gi|161336292|gb|ABX62597.1| peptidyl-tRNA hydrolase [Brucella canis ATCC 23365]
gi|225617141|gb|EEH14187.1| peptidyl-tRNA hydrolase [Brucella ceti str. Cudo]
gi|225641380|gb|ACO01294.1| peptidyl-tRNA hydrolase [Brucella melitensis ATCC 23457]
gi|256000115|gb|ACU48514.1| peptidyl-tRNA hydrolase [Brucella microti CCM 4915]
gi|260151310|gb|EEW86404.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 1 str. 16M]
gi|260155486|gb|EEW90566.1| peptidyl-tRNA hydrolase [Brucella suis bv. 4 str. 40]
gi|260916125|gb|EEX82986.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 3 str. Tulya]
gi|260921258|gb|EEX87911.1| peptidyl-tRNA hydrolase [Brucella ceti B1/94]
gi|260924752|gb|EEX91320.1| peptidyl-tRNA hydrolase [Brucella ceti M13/05/1]
gi|261295242|gb|EEX98738.1| peptidyl-tRNA hydrolase [Brucella ceti M644/93/1]
gi|261297368|gb|EEY00865.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis B2/94]
gi|261304733|gb|EEY08230.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis M163/99/10]
gi|261738698|gb|EEY26694.1| peptidyl-tRNA hydrolase [Brucella sp. F5/99]
gi|261742578|gb|EEY30504.1| peptidyl-tRNA hydrolase [Brucella suis bv. 5 str. 513]
gi|261745236|gb|EEY33162.1| peptidyl-tRNA hydrolase [Brucella suis bv. 3 str. 686]
gi|262553262|gb|EEZ09096.1| peptidyl-tRNA hydrolase [Brucella ceti M490/95/1]
gi|263002374|gb|EEZ14949.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 1 str. Rev.1]
gi|263093527|gb|EEZ17561.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 2 str. 63/9]
gi|264661373|gb|EEZ31634.1| peptidyl-tRNA hydrolase [Brucella pinnipedialis M292/94/1]
gi|326409554|gb|ADZ66619.1| peptidyl-tRNA hydrolase [Brucella melitensis M28]
gi|326539260|gb|ADZ87475.1| peptidyl-tRNA hydrolase [Brucella melitensis M5-90]
Length = 250
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 95/190 (50%), Positives = 130/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +L+K
Sbjct: 1 MLLIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKLTPA-DLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDA 119
Query: 121 KC-----GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+R
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLMGAVADNVAMLARR 179
Query: 176 EDVSFLNHIV 185
ED SF+N I
Sbjct: 180 EDNSFMNRIA 189
>gi|319781881|ref|YP_004141357.1| peptidyl-tRNA hydrolase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167769|gb|ADV11307.1| peptidyl-tRNA hydrolase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 241
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 89/183 (48%), Positives = 119/183 (65%), Gaps = 1/183 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + AGLGNPG +Y NRHN+GFM D I H F W KKF I+EG L G + +LIK
Sbjct: 1 MLLFAGLGNPGAKYAGNRHNVGFMAADAIARRHSFSPWSKKFQGLIAEGSLGGEKVVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ E + FYKL L V +D++DL G LR+KTGGG GHNG++SI
Sbjct: 61 PQTFMNLSGQTVGEALRFYKL-ELSALTVFYDEIDLAEGKLRIKTGGGAGGHNGIRSIDG 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y+R+RIG+G P + HVLG+F +R +L P++D IA + ++AK ++ F
Sbjct: 120 HVGNAYRRVRIGVGHPGVKEMVQHHVLGDFDKADREWLDPLLDAIADNAAMIAKGDESGF 179
Query: 181 LNH 183
+N
Sbjct: 180 MNK 182
>gi|294011769|ref|YP_003545229.1| peptidyl-tRNA hydrolase [Sphingobium japonicum UT26S]
gi|292675099|dbj|BAI96617.1| peptidyl-tRNA hydrolase [Sphingobium japonicum UT26S]
Length = 189
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 79/185 (42%), Positives = 111/185 (60%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I GLGNPG +Y NRHN+GFM +D I H FP KK+F + EG++ + +L+K
Sbjct: 1 MQIWVGLGNPGTQYAMNRHNVGFMAVDLIADMHRFPPPKKQFQGWVQEGRIGTEKIVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E M FYKL ++ V HD+LDL +++K GGG+AGHNGL+S
Sbjct: 61 PATFMNESGRSVGEAMRFYKLAP-QDVTVFHDELDLAPMKVKVKRGGGNAGHNGLRSTDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++R+RIGIG P + +VLGN+ E L ++ I LA+ +D F
Sbjct: 120 HIGAEFRRVRIGIGHPGHKDRVHGYVLGNYHKSEMNALADMLGAIGAEAEWLARGDDARF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNEVA 184
>gi|293571070|ref|ZP_06682111.1| peptidyl-tRNA hydrolase [Enterococcus faecium E980]
gi|291608853|gb|EFF38134.1| peptidyl-tRNA hydrolase [Enterococcus faecium E980]
Length = 197
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HNIGFM +D+I H K F AE++E +G + +L+K
Sbjct: 12 MKMIVGLGNPGTKYQYTKHNIGFMVVDQIAREHQATFKKNPFEAEVAEFFHNGEKILLVK 71
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M ++ + E +VI+DDLDL G +RL+ G GHNG+KSI
Sbjct: 72 PQTFMNESGRAVGPLMTYFGIYP-EELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIIS 130
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
N + R+++GIGRP +++HVL FS + + I +++ L + V
Sbjct: 131 HLNTNVFDRIKVGIGRPEGKKTVVQHVLSPFSKENQPLIEESIFQSVKAVEYLIEGHSFV 190
Query: 179 SFLNHIV 185
+N
Sbjct: 191 DAMNQFN 197
>gi|253582592|ref|ZP_04859813.1| peptidyl-tRNA hydrolase [Fusobacterium varium ATCC 27725]
gi|251835462|gb|EES64002.1| peptidyl-tRNA hydrolase [Fusobacterium varium ATCC 27725]
Length = 186
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 73/186 (39%), Positives = 103/186 (55%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHNIGF I ++ K KF +SE +DG + + +K
Sbjct: 1 MKLVVGLGNPGDKYAKTRHNIGFEVISKLQEELNIVGEKDKFQGLLSEKNIDGEKVLFLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG S+ V+NFYK+ ++ +VI+DD+DL G LR+K G GHNG+KSI
Sbjct: 61 PQTFMNLSGNSIAAVVNFYKIDAKKDMIVIYDDMDLPVGKLRVKEKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDVS 179
G + R++ GIG+ I VLG F E+ + +I+N A L + E
Sbjct: 121 HLGDEFLRIKCGIGK--SKDDTIDFVLGQFDKSEQEVVDKMIENAADCALDLIRDVELGR 178
Query: 180 FLNHIV 185
+
Sbjct: 179 IMQKYN 184
>gi|126701126|ref|YP_001090023.1| peptidyl-tRNA hydrolase [Clostridium difficile 630]
gi|254977127|ref|ZP_05273599.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-66c26]
gi|255094456|ref|ZP_05323934.1| peptidyl-tRNA hydrolase [Clostridium difficile CIP 107932]
gi|255102712|ref|ZP_05331689.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-63q42]
gi|255308533|ref|ZP_05352704.1| peptidyl-tRNA hydrolase [Clostridium difficile ATCC 43255]
gi|255316207|ref|ZP_05357790.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-76w55]
gi|255518869|ref|ZP_05386545.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-97b34]
gi|255652048|ref|ZP_05398950.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-37x79]
gi|260685022|ref|YP_003216307.1| peptidyl-tRNA hydrolase [Clostridium difficile CD196]
gi|260688680|ref|YP_003219814.1| peptidyl-tRNA hydrolase [Clostridium difficile R20291]
gi|306521785|ref|ZP_07408132.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-32g58]
gi|119390926|sp|Q181A2|PTH_CLOD6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|115252563|emb|CAJ70406.1| Peptidyl-tRNA hydrolase (PTH) [Clostridium difficile]
gi|260211185|emb|CBA66658.1| peptidyl-tRNA hydrolase [Clostridium difficile CD196]
gi|260214697|emb|CBE07348.1| peptidyl-tRNA hydrolase [Clostridium difficile R20291]
Length = 186
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 62/186 (33%), Positives = 109/186 (58%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGNPG +Y + RHN+GF ID + + K K A I EG++ + +L+K
Sbjct: 1 MYVVVGLGNPGKKYEKTRHNVGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG++L+++ +YK+ +L N +V++DD+DL+ G +R++ G HNG+KSI++
Sbjct: 61 PQTYMNLSGETLIDIYKYYKV-DLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITK 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ R+R+G+ +P + VL F E + ++ A ++ + +
Sbjct: 120 CLGSNDFPRVRVGVSKPEAGQDLADFVLSRFRKEESDNINEALEKAADAIDSIIRENIDM 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 SMNKYN 185
>gi|317133015|ref|YP_004092329.1| peptidyl-tRNA hydrolase [Ethanoligenens harbinense YUAN-3]
gi|315470994|gb|ADU27598.1| peptidyl-tRNA hydrolase [Ethanoligenens harbinense YUAN-3]
Length = 208
Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats.
Identities = 76/187 (40%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+IVAGLGNPG +Y RHN GF +D + + + + KF A GQ+ G R +L+KP
Sbjct: 23 WIVAGLGNPGIQYEGTRHNAGFAALDMLAAKNGVRIDRAKFKALCGIGQVAGKRVLLLKP 82
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+++ +FYKLP +E LV+ DD+ L G LR++ G GHNG+KSI +
Sbjct: 83 QTFMNLSGEAVAAAAHFYKLP-VERVLVLFDDISLPVGKLRVRRKGSAGGHNGIKSIIGE 141
Query: 122 CGKN-YKRLRIGIG-RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG + + R++IG+G +P + VLG FS ER +D A ++ L + S
Sbjct: 142 CGSDGFPRVKIGVGDKPRPDYDLASWVLGKFSEAERPVFAQSLDRAAEAVEELIQNGVGS 201
Query: 180 FLNHIVS 186
+N S
Sbjct: 202 AMNLYNS 208
>gi|28377423|ref|NP_784315.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum WCFS1]
gi|38257843|sp|Q88Z39|PTH_LACPL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|28270255|emb|CAD63156.1| aminoacyl-tRNA hydrolase [Lactobacillus plantarum WCFS1]
Length = 185
Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y + RHN+GFM +D + S KF A+++ DG + +L+K
Sbjct: 1 MKMIVGLGNIGRQYAQTRHNVGFMIVDELASKLNVTFQTSKFEAQVATAFQDGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M++Y + + + LVIHDDLDL G +RLK G GHNG+KSI
Sbjct: 61 PATYMNDSGRAVGPLMSYYNV-DPADLLVIHDDLDLPLGKVRLKQKGSAGGHNGIKSIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++KR+++GI P ++ +VLG F+ E ++ +D +
Sbjct: 120 HVGDQHFKRVKVGIDHP-QKMSVVDYVLGKFTPAEVAKFDDAKITALAAVEAWLANDDFT 178
Query: 180 F-LNHIV 185
+N
Sbjct: 179 AVMNQYN 185
>gi|85716024|ref|ZP_01047001.1| peptidyl-tRNA hydrolase [Nitrobacter sp. Nb-311A]
gi|85697222|gb|EAQ35103.1| peptidyl-tRNA hydrolase [Nitrobacter sp. Nb-311A]
Length = 204
Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 79/185 (42%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +D I H F W+++F E SEG LD R IL+K
Sbjct: 1 MRLFVGLGNPGTKYQGNRHNIGFMVVDEIARRHGFAPWRRRFQGEASEGTLDRERVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ + + F+KL + +V HD+++L +R+K GGG AGHNGL+SIS
Sbjct: 61 PATYMNNSGNAVQDAVRFFKLTEG-DVVVFHDEIELPSAKVRVKVGGGIAGHNGLRSISA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y+R+R+G+G P + HVL +F+ ER ++ ++D +A + LL D +F
Sbjct: 120 HIGNGYRRVRLGVGHPGVKDLVHAHVLNDFAKGERPWVDALVDVVAENAALLVAARDSTF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 QNKVH 184
>gi|300313474|ref|YP_003777566.1| peptidyl-tRNA hydrolase [Herbaspirillum seropedicae SmR1]
gi|300076259|gb|ADJ65658.1| peptidyl-tRNA hydrolase protein [Herbaspirillum seropedicae SmR1]
Length = 192
Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG EY + RHN GF +D + A +++F+A + + G L++PQ
Sbjct: 5 LIVGLGNPGPEYEQTRHNAGFWLVDNLAG-PVRLAREQRFNALAGKTSIAGSEVWLLEPQ 63
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SGQS+ + FYK+ N + LV+HD+LDL G ++K GG GHNGLK I+
Sbjct: 64 TYMNRSGQSVGALARFYKI-NPDEVLVVHDELDLPPGAAKIKKGGSSGGHNGLKDITAAL 122
Query: 123 G-KNYKRLRIGIGRP---PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G ++Y RLR+GIG P + VL E+ + +D +PLL + +
Sbjct: 123 GTQDYWRLRLGIGHPRTLGLQQPVADFVLHRPRKEEQNLINEALDQSLNVIPLLVQGKFE 182
Query: 179 SFLNHIVSVR 188
+ + + +
Sbjct: 183 QAMMELHTGK 192
>gi|62290421|ref|YP_222214.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 1 str. 9-941]
gi|82700344|ref|YP_414918.1| peptidyl-tRNA hydrolase [Brucella melitensis biovar Abortus 2308]
gi|237815929|ref|ZP_04594926.1| peptidyl-tRNA hydrolase [Brucella abortus str. 2308 A]
gi|254689722|ref|ZP_05152976.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 6 str. 870]
gi|254697866|ref|ZP_05159694.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 2 str. 86/8/59]
gi|254730756|ref|ZP_05189334.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 4 str. 292]
gi|256257974|ref|ZP_05463510.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 9 str. C68]
gi|260546957|ref|ZP_05822696.1| peptidyl-tRNA hydrolase [Brucella abortus NCTC 8038]
gi|260755254|ref|ZP_05867602.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 6 str. 870]
gi|260758475|ref|ZP_05870823.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 4 str. 292]
gi|260762300|ref|ZP_05874643.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 2 str. 86/8/59]
gi|260884269|ref|ZP_05895883.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 9 str. C68]
gi|297248807|ref|ZP_06932525.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 5 str. B3196]
gi|30913141|sp|Q9AEQ5|PTH_BRUAB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390916|sp|Q2YLX5|PTH_BRUA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|13591431|gb|AAK29776.1| peptidyl tRNA hydrolase [Brucella abortus]
gi|62196553|gb|AAX74853.1| Pth, peptidyl-tRNA hydrolase [Brucella abortus bv. 1 str. 9-941]
gi|82616445|emb|CAJ11508.1| Peptidyl-tRNA hydrolase [Brucella melitensis biovar Abortus 2308]
gi|237789227|gb|EEP63438.1| peptidyl-tRNA hydrolase [Brucella abortus str. 2308 A]
gi|260096007|gb|EEW79884.1| peptidyl-tRNA hydrolase [Brucella abortus NCTC 8038]
gi|260668793|gb|EEX55733.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 4 str. 292]
gi|260672732|gb|EEX59553.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 2 str. 86/8/59]
gi|260675362|gb|EEX62183.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 6 str. 870]
gi|260873797|gb|EEX80866.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 9 str. C68]
gi|297175976|gb|EFH35323.1| peptidyl-tRNA hydrolase [Brucella abortus bv. 5 str. B3196]
Length = 250
Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 94/190 (49%), Positives = 130/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +L+K
Sbjct: 1 MLLIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYK+ + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKMTPA-DLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDA 119
Query: 121 KC-----GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+R
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLMGAVADNVAMLARR 179
Query: 176 EDVSFLNHIV 185
ED SF+N I
Sbjct: 180 EDNSFMNRIA 189
>gi|288921323|ref|ZP_06415605.1| peptidyl-tRNA hydrolase [Frankia sp. EUN1f]
gi|288347297|gb|EFC81592.1| peptidyl-tRNA hydrolase [Frankia sp. EUN1f]
Length = 195
Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 73/186 (39%), Positives = 113/186 (60%), Gaps = 2/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG Y NRHN+GFM +D + + A++ + +L G +L +P
Sbjct: 10 WLVVGLGNPGPAYAGNRHNVGFMVVDLLAERTGARLRSHRSRADVDQVRLAGRPAVLARP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+TFMN+SG + FYK+ ++ + +V+HD+LD+ FG +RLK GGGD GHNGL+SI+
Sbjct: 70 RTFMNVSGPPAAALRAFYKV-DVAHVIVVHDELDIPFGAIRLKRGGGDNGHNGLRSITSS 128
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y R+R+GIGRPP VL +FS+ ER L ++D+ A ++ L + E +
Sbjct: 129 LGSRDYLRVRVGIGRPPGRMDPADFVLRDFSTVERKELPLLVDSAADAVESLLQEELSAV 188
Query: 181 LNHIVS 186
N +
Sbjct: 189 QNRFHA 194
>gi|237747306|ref|ZP_04577786.1| peptidyl-tRNA hydrolase [Oxalobacter formigenes HOxBLS]
gi|229378657|gb|EEO28748.1| peptidyl-tRNA hydrolase [Oxalobacter formigenes HOxBLS]
Length = 195
Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 69/192 (35%), Positives = 109/192 (56%), Gaps = 7/192 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D + + W+K KF A +++ +++G L+K
Sbjct: 5 LIVGLGNPGAEYEQTRHNAGFWFVDNLENGSSGVRWQKESKFSALVAKTKINGADVWLMK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG ++ + F+K+ + E LV+HD+LD+ G +LK G GHNGLK I+
Sbjct: 65 PQTFMNRSGLAVGAIARFFKIASDE-ILVVHDELDILPGNAKLKRSGSTGGHNGLKDIAA 123
Query: 121 KCG-KNYKRLRIGIGRPPD---TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G +++ RLRIGIG P A +I +VL ++ + I + +P+L + E
Sbjct: 124 ALGTQDFWRLRIGIGHPRSQNTKAPVIDYVLQRPRREDQDSIDDAIGRALQVVPMLCRGE 183
Query: 177 DVSFLNHIVSVR 188
+ + +VR
Sbjct: 184 FDKAMKELHTVR 195
>gi|227552671|ref|ZP_03982720.1| aminoacyl-tRNA hydrolase [Enterococcus faecium TX1330]
gi|293378836|ref|ZP_06624991.1| aminoacyl-tRNA hydrolase [Enterococcus faecium PC4.1]
gi|227178200|gb|EEI59172.1| aminoacyl-tRNA hydrolase [Enterococcus faecium TX1330]
gi|292642377|gb|EFF60532.1| aminoacyl-tRNA hydrolase [Enterococcus faecium PC4.1]
Length = 197
Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HNIGFM +D+I H K F AE++E +G + +L+K
Sbjct: 12 MKMIVGLGNPGTKYQYTKHNIGFMVVDQIAREHQAAFKKNPFEAEVAEFFHNGEKILLVK 71
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M ++ + E +VI+DDLDL G +RL+ G GHNG+KSI
Sbjct: 72 PQTFMNESGRAVGPLMTYFGIYP-EELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIIS 130
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
N + R+++GIGRP +++HVL FS + + I +++ L + V
Sbjct: 131 HLNTNVFDRIKVGIGRPEGKKTVVQHVLSPFSKENQPLIEESIFQSVKAVEYLIEGHSFV 190
Query: 179 SFLNHIV 185
+N
Sbjct: 191 DAMNQFN 197
>gi|310639512|ref|YP_003944270.1| peptidyl-tRNA hydrolase [Paenibacillus polymyxa SC2]
gi|309244462|gb|ADO54029.1| Peptidyl-tRNA hydrolase [Paenibacillus polymyxa SC2]
Length = 186
Score = 243 bits (622), Expect = 8e-63, Method: Composition-based stats.
Identities = 71/186 (38%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y + RHN+GFM +D + H + K A I EG + G++T+LIK
Sbjct: 1 MKWIVGLGNPGPQYEKTRHNVGFMALDALALRHNIQITQSKCKALIGEGHIGGVKTVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+SL M++YK ++E+ +V++DDLD + G +RL+ G GHNG+KSI +
Sbjct: 61 PMTYMNLSGESLRAYMDYYK-ADMEDLIVVYDDLDTEVGKIRLRYQGSAGGHNGIKSIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ R+R+GI RP I+ +VLG F E+ L +I++ +L
Sbjct: 120 HTGTQSFNRIRMGISRPEPGHAIVDYVLGTFPKKEKELLTGMIEDTCNALEYSLNHPFER 179
Query: 180 FLNHIV 185
+
Sbjct: 180 TMAEFN 185
>gi|257871349|ref|ZP_05651002.1| peptidyl-tRNA hydrolase [Enterococcus gallinarum EG2]
gi|257805513|gb|EEV34335.1| peptidyl-tRNA hydrolase [Enterococcus gallinarum EG2]
Length = 186
Score = 243 bits (622), Expect = 8e-63, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN+GFM +D + + F AEI+E ++G + +L+K
Sbjct: 1 MKMIIGLGNPGKKYEKTKHNVGFMVVDALAEKYQATFKSSAFEAEIAEFFMNGEKIMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M +Y + E +VI+DDLDL G +RL+ G GHNG+KS+
Sbjct: 61 PQTFMNESGRAVGPLMTYYGVYP-EEIVVIYDDLDLALGKIRLRQKGSAGGHNGMKSLIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS-LPLLAKREDV 178
G + + R+++GI RP ++ HVL F+ ++ +L +D A + + L + +
Sbjct: 120 HLGTSVFDRIKVGIDRPQPGRTVVDHVLSPFAKEDQPMILQSLDKAAAASIDYLTTGDFL 179
Query: 179 SFLNHIV 185
+ +N
Sbjct: 180 ATMNRFN 186
>gi|307292918|ref|ZP_07572764.1| peptidyl-tRNA hydrolase [Sphingobium chlorophenolicum L-1]
gi|306880984|gb|EFN12200.1| peptidyl-tRNA hydrolase [Sphingobium chlorophenolicum L-1]
Length = 189
Score = 243 bits (622), Expect = 8e-63, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 109/185 (58%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I GLGNPG +Y NRHN+GFM D I H F KK+F + EG++ + +LIK
Sbjct: 1 MQIWVGLGNPGTQYAMNRHNVGFMAADVIADMHRFSPPKKQFQGWVQEGRIGSEKIVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E M FYKL E+ V HD+LDL +++K GGG+AGHNGL+S
Sbjct: 61 PATFMNESGRSVGEAMRFYKLAP-EDVTVFHDELDLAPMKVKVKRGGGNAGHNGLRSTDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++R+RIGIG P + +VLGN+ E L ++ I LAK +D F
Sbjct: 120 HIGAEFRRVRIGIGHPGHKDRVHGYVLGNYHKSETDALADMLGAIGAEAEWLAKGDDARF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNEVA 184
>gi|282865454|ref|ZP_06274505.1| peptidyl-tRNA hydrolase [Streptomyces sp. ACTE]
gi|282559498|gb|EFB65049.1| peptidyl-tRNA hydrolase [Streptomyces sp. ACTE]
Length = 197
Score = 243 bits (622), Expect = 8e-63, Method: Composition-based stats.
Identities = 77/191 (40%), Positives = 116/191 (60%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLD-----GLR 55
+++ GLGNPG EY NRHN+GFM D + + + +K A++ EG++ R
Sbjct: 8 WLIVGLGNPGPEYAANRHNVGFMVADLLATRIGGKFKRAQKAQAQVVEGRVGPPGPLSRR 67
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L+KP ++MNLSG + + +FYK+P ++ + +HD+LD+D+GTLRLK GGGD GHNGL
Sbjct: 68 VVLVKPMSYMNLSGGPVTALRDFYKVPT-DHVVAVHDELDIDYGTLRLKLGGGDNGHNGL 126
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G +Y R+R GIGRPP + VL +FSS ER L ++D A ++ L
Sbjct: 127 KSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSGERKELGYLVDRAADAVEALVAE 186
Query: 176 EDVSFLNHIVS 186
+ S
Sbjct: 187 GLERAQSAYNS 197
>gi|187777478|ref|ZP_02993951.1| hypothetical protein CLOSPO_01046 [Clostridium sporogenes ATCC
15579]
gi|187774406|gb|EDU38208.1| hypothetical protein CLOSPO_01046 [Clostridium sporogenes ATCC
15579]
Length = 189
Score = 243 bits (622), Expect = 8e-63, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 111/189 (58%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGN G EY + RHNIGF ID I + ++KF EG++ + IL+K
Sbjct: 1 MYLVVGLGNIGEEYKKTRHNIGFDAIDIIAEEYNIEINRQKFKGSYGEGRIGNEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NFYK+ EN +VI+DD+ +D G LR++ G GHNG+K+I +
Sbjct: 61 PSTYMNLSGESVIEAANFYKINK-ENIIVIYDDMSIDIGKLRIRGKGSAGGHNGIKNIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+GIG+P +++ +VLG FS +R + + ++ + +
Sbjct: 120 HLNSDIFPRVRVGIGQP--DGNVVNYVLGKFSKEQREIIEKTLAMSVKACISIVEDGVTE 177
Query: 180 FLNHIVSVR 188
+N V+
Sbjct: 178 AMNKYNGVK 186
>gi|254555606|ref|YP_003062023.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum JDM1]
gi|300768956|ref|ZP_07078847.1| aminoacyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308179636|ref|YP_003923764.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|254044533|gb|ACT61326.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum JDM1]
gi|300493477|gb|EFK28654.1| aminoacyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045127|gb|ADN97670.1| peptidyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 185
Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y + RHN+GFM +D + S KF A+++ DG + +L+K
Sbjct: 1 MKMIVGLGNIGRQYAQTRHNVGFMIVDELASKLNVTFQTSKFEAQVATAFQDGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M++Y + + + LVIHDDLDL G +RLK G GHNG+KSI
Sbjct: 61 PATYMNDSGRAVGPLMSYYNV-DPADLLVIHDDLDLPLGKVRLKQKGSAGGHNGIKSIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++KR+++GI P ++ +VLG F+ E ++ +D +
Sbjct: 120 HVGDQHFKRVKVGIDHP-QKMSVVDYVLGKFTPAEVAKFDDAKITALAAVEAWLANDDFA 178
Query: 180 F-LNHIV 185
+N
Sbjct: 179 AVMNQYN 185
>gi|327438087|dbj|BAK14452.1| peptidyl-tRNA hydrolase [Solibacillus silvestris StLB046]
Length = 187
Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats.
Identities = 60/186 (32%), Positives = 102/186 (54%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y RHNIGF ID + + P + KF+ + + IL+K
Sbjct: 1 MKLIIGLGNPGKPYEHTRHNIGFDVIDELANRWNAPLNQTKFNGMYATVYRPEGKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + +M+++ + + +VI+DDLDL+ G LRL+ G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGECVRPLMDYFDIEIEDI-IVIYDDLDLETGKLRLRGKGSAGGHNGIKSLIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+G+ RPP + +VL FS ++ + ++ ++ + +
Sbjct: 120 HLGTQEFNRIRVGVSRPPAGMKVADYVLAKFSKEDQPIVKEAVEKSCDAVETALTKPFLE 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 VMNKFN 185
>gi|170759071|ref|YP_001788880.1| peptidyl-tRNA hydrolase [Clostridium botulinum A3 str. Loch Maree]
gi|238688504|sp|B1KTE2|PTH_CLOBM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169406060|gb|ACA54471.1| aminoacyl-tRNA hydrolase [Clostridium botulinum A3 str. Loch Maree]
Length = 189
Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 114/189 (60%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGN G EY + RHNIGF +D + + ++KF EG++ + IL+K
Sbjct: 1 MYLVVGLGNIGKEYKKTRHNIGFDVVDIVAEKYNIEINRQKFKGSYGEGRIGNEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NFYK+ + EN +VI+DD+ +D G LR++ G GHNG+K+I +
Sbjct: 61 PSTYMNLSGESVIEAANFYKI-DKENIIVIYDDMSIDIGKLRVRGKGSAGGHNGIKNIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+GIG+P +++ +VLG FS +R + ++ A++ + +
Sbjct: 120 HLNSDIFPRVRVGIGQP--DENVVNYVLGKFSKDQREVIEKVLAMSAKACISIVEDGVTE 177
Query: 180 FLNHIVSVR 188
+N V+
Sbjct: 178 AMNKYNGVK 186
>gi|85373994|ref|YP_458056.1| peptidyl-tRNA hydrolase [Erythrobacter litoralis HTCC2594]
gi|123409639|sp|Q2NAN2|PTH_ERYLH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|84787077|gb|ABC63259.1| peptidyl-tRNA hydrolase [Erythrobacter litoralis HTCC2594]
Length = 189
Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats.
Identities = 77/185 (41%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I AGLGNPG +Y +RHN+GFM D I H F +KKF + EG++ + +L+K
Sbjct: 1 MQIWAGLGNPGPKYALHRHNVGFMACDVIAEMHGFEPVQKKFQGWVQEGRIGSEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E M FYKL ++ V +D+LDL+ +++K GGG AGHNG++S
Sbjct: 61 PGTFMNESGRAIGEAMRFYKLEP-QDVTVFYDELDLEPFKIKVKRGGGAAGHNGIRSTIR 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G++++R+RIGIG P + HVLGN++ E+ L+ ++ I LAK +D F
Sbjct: 120 HIGEDFRRIRIGIGHPGHKDRVTGHVLGNYAKAEQDDLVQMLGAIGAEAEWLAKGDDARF 179
Query: 181 LNHIV 185
++ I
Sbjct: 180 MSDIA 184
>gi|332140912|ref|YP_004426650.1| peptidyl-tRNA hydrolase [Alteromonas macleodii str. 'Deep ecotype']
gi|238693243|sp|B4RT72|PTH_ALTMD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|327550934|gb|AEA97652.1| peptidyl-tRNA hydrolase [Alteromonas macleodii str. 'Deep ecotype']
Length = 193
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 99/189 (52%), Gaps = 5/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G ++++ + P + KF + + +DG L+ P
Sbjct: 6 LIVGLGNPGPEYENTRHNAGEWFLNQLADTYNAPLKPETKFFGKTARITIDGKDIRLLYP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ++ + NFY++ E LV D+LDL G + K GG NG++ I +
Sbjct: 66 TTFMNKSGQAVAALANFYRIEP-EQILVAFDELDLPPGVAKYKVGGSS-SQNGVRDIVAR 123
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G KN+ RLRIGIG P + + HVLG S+ E+ + ID R +L K +
Sbjct: 124 MGNNKNFLRLRIGIGHPGHKSRVTGHVLGKPSAEEKTAIESAIDEAVRCTEILLKEDLKQ 183
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 184 AQNRLHSHK 192
>gi|302669663|ref|YP_003829623.1| peptidyl-tRNA hydrolase Pth [Butyrivibrio proteoclasticus B316]
gi|302394136|gb|ADL33041.1| peptidyl-tRNA hydrolase Pth [Butyrivibrio proteoclasticus B316]
Length = 226
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNP +Y RHN+GF ID + + + KF A +G++ R IL+K
Sbjct: 34 MYIIAGLGNPEKKYFGTRHNVGFATIDALSDKYGIELTETKFKAAFGKGRIGNDRVILVK 93
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + +++K+ + E +VI DD++LD G +R++ G GHNGLKSI
Sbjct: 94 PLTYMNLSGEAIRPICDYFKVDSKEELIVISDDVELDVGNIRVRPKGSAGGHNGLKSIIA 153
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + R+R+G+G+ P ++ VLG F + + ID ++ + S
Sbjct: 154 QLGHSEFNRVRVGVGKKPKEWDMVDWVLGTFQGEDAVSIKEGIDRAVAAVEEIMAAGVDS 213
Query: 180 FLNHIVSVRK 189
+N +++K
Sbjct: 214 AMNKYNTIKK 223
>gi|254504345|ref|ZP_05116496.1| peptidyl-tRNA hydrolase [Labrenzia alexandrii DFL-11]
gi|222440416|gb|EEE47095.1| peptidyl-tRNA hydrolase [Labrenzia alexandrii DFL-11]
Length = 248
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 82/186 (44%), Positives = 122/186 (65%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG +Y NRHNIGFM +D IH + F W+ +F ++SEG+L + +L+
Sbjct: 1 MRLIVGLGNPGGKYARNRHNIGFMALDEIHRRNSGFQPWRARFQGQVSEGRLGSEKVLLL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG+++ E M F+K+ E+ +VI+D+LDL R+K GGG GHNGL+SIS
Sbjct: 61 KPSTYMNESGRAVGEAMRFFKIEP-EDIVVIYDELDLPPAKFRMKKGGGHGGHNGLRSIS 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+ Y+RLR+GIG P D + +VLG+FS ++ +L P++ +A LLA+ +D
Sbjct: 120 AHIGQEYRRLRLGIGHPGDKKLVSNYVLGDFSKADQDWLNPLLAEVADQAGLLAEAKDSQ 179
Query: 180 FLNHIV 185
F N +
Sbjct: 180 FANKMT 185
>gi|288554662|ref|YP_003426597.1| peptidyl-tRNA hydrolase [Bacillus pseudofirmus OF4]
gi|288545822|gb|ADC49705.1| peptidyl-tRNA hydrolase [Bacillus pseudofirmus OF4]
Length = 185
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 64/186 (34%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHNIGF ID + KF ++G + +K
Sbjct: 1 MKVVVGLGNPGAKYAGTRHNIGFDIIDYCAKELGVELDQAKFKGVYGTKVINGEKVFFLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +++++ + ++E+ +VI+DDLDL G +RL+ G GHNG+KS+ +
Sbjct: 61 PLTYMNLSGESVRPLLDYFNI-DIEDLVVIYDDLDLPAGKIRLRQKGSAGGHNGIKSLIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + +KR+R+GI RP + I+ +VLG + ER + I A+++ ++ +
Sbjct: 120 HLGTDKFKRIRVGIDRPKNGEPIVNYVLGTYHPDEREAVNESIVQAAKAVEAWTEKPFLE 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 VMNQFN 185
>gi|329115063|ref|ZP_08243818.1| Peptidyl-tRNA hydrolase [Acetobacter pomorum DM001]
gi|326695506|gb|EGE47192.1| Peptidyl-tRNA hydrolase [Acetobacter pomorum DM001]
Length = 197
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 76/187 (40%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP +RHN+GFM ++ I + F W+ +F E++EG++ + +L+
Sbjct: 5 MLLWVGLGNPESSMRRHRHNVGFMAVEAIARKYGFTPWRNRFKGEVAEGRIGRQKVLLLL 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ E FYK+ EN V HD+LDL G LR+K GGG AGHNGL+S +
Sbjct: 65 PMTYMNKSGESVQEAAAFYKIAP-ENITVFHDELDLAPGRLRIKRGGGAAGHNGLRSTDK 123
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER-YFLLPIIDNIARSLPLLAKREDV 178
G Y R+RIGIG P + VLGNF+ +R +L ++D +A + PLLA
Sbjct: 124 MLGTPEYWRVRIGIGHPGVKERVHGWVLGNFTETDRQEWLERLLDRMADAAPLLADGRAD 183
Query: 179 SFLNHIV 185
F+ +
Sbjct: 184 QFMTKVA 190
>gi|167463171|ref|ZP_02328260.1| peptidyl-tRNA hydrolase [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322381191|ref|ZP_08055194.1| peptidyl-tRNA hydrolase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321154767|gb|EFX47038.1| peptidyl-tRNA hydrolase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 186
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 66/186 (35%), Positives = 104/186 (55%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M GLGNPG Y RHNIGFM IDR ++ K +E++E ++ + L+K
Sbjct: 1 MKCFVGLGNPGRAYTHTRHNIGFMAIDRFAEKLGGVRFQSKCKSELAEVRVGTEKVYLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ M++YK+ ++++ ++++DD D DFG +RL+ G GHNG+KS+
Sbjct: 61 PVTYMNLSGEAIRAFMDYYKV-DVQDIVIVYDDRDTDFGKIRLRYKGSAGGHNGIKSVIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + +KR+R+GI RP I +VL NF+ E L I+D +L +
Sbjct: 120 HIGTQEFKRIRMGISRPAPGQDIADYVLSNFNKAEMAELPSILDKTCEALEFFLDHTFEA 179
Query: 180 FLNHIV 185
+
Sbjct: 180 TMAKFN 185
>gi|152980211|ref|YP_001354820.1| peptidyl-tRNA hydrolase [Janthinobacterium sp. Marseille]
gi|151280288|gb|ABR88698.1| peptidyl-tRNA hydrolase [Janthinobacterium sp. Marseille]
Length = 195
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF--HFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D++ + + K++A ++ + G L++
Sbjct: 5 LIVGLGNPGQEYEQTRHNAGFWLVDQLARNMPRCNLSRESKYNALAAKTVIAGQEVWLLE 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SGQS+ + FYK+ E LV HD+LDL G +LK GG GHNGLK I+
Sbjct: 65 PQTFMNRSGQSVGALARFYKILPDE-VLVAHDELDLPPGVAKLKKGGSSGGHNGLKDITA 123
Query: 121 KCG-KNYKRLRIGIGRPPD---TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G ++Y RLRIGIG P ++ VL E+ + I +P+L + +
Sbjct: 124 ALGTQDYWRLRIGIGHPRTLNLQQAVVDFVLHRPRKEEQPLIDEAIAKSLDVIPMLCEGK 183
Query: 177 DVSFLNHIVSVR 188
+ + + +
Sbjct: 184 FEAATMQLHTNK 195
>gi|239988327|ref|ZP_04708991.1| peptidyl-tRNA hydrolase [Streptomyces roseosporus NRRL 11379]
Length = 197
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 75/191 (39%), Positives = 115/191 (60%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLD-----GLR 55
+++ GLGNPG +Y NRHN+GFM D + + + +K A++ EG++ R
Sbjct: 8 WLIVGLGNPGPDYAANRHNVGFMVADLLATRIGGKFKRAQKAQAQVVEGRIGPPGPASRR 67
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L+KP ++MNLSG + + +FYK+P ++ + +HD+LD+D+G LRLK GGGD GHNGL
Sbjct: 68 VVLVKPMSYMNLSGGPVTALRDFYKVPT-DHVVAVHDELDVDYGALRLKLGGGDNGHNGL 126
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G +Y R+R GIGRPP + VL +FSS ER L ++D A ++ L
Sbjct: 127 KSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECLLAE 186
Query: 176 EDVSFLNHIVS 186
+ S
Sbjct: 187 GLERAQSAYNS 197
>gi|293375930|ref|ZP_06622191.1| aminoacyl-tRNA hydrolase [Turicibacter sanguinis PC909]
gi|325838695|ref|ZP_08166610.1| aminoacyl-tRNA hydrolase [Turicibacter sp. HGF1]
gi|292645452|gb|EFF63501.1| aminoacyl-tRNA hydrolase [Turicibacter sanguinis PC909]
gi|325490745|gb|EGC93052.1| aminoacyl-tRNA hydrolase [Turicibacter sp. HGF1]
Length = 186
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 103/185 (55%), Gaps = 4/185 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILI 59
M + GLGNPG +Y RHN GFM ID + +KKF +I G + G + IL+
Sbjct: 1 MKLFVGLGNPGSKYERTRHNAGFMVIDALSKEWNIELTDEKKFKGQIGRGVVKGEKVILL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG+S+ VM+FY + ++E+ +VI+DDLDL G +RL+ G GHNG+KS+
Sbjct: 61 KPTTFMNLSGESVRAVMDFYDI-DIEDLVVIYDDLDLPHGKIRLRLKGSAGGHNGIKSLI 119
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ +KR+R+GI R P ++ +VLG F+ E + ID + L
Sbjct: 120 AHVKTQEFKRIRVGIDRHP-KIPVVDYVLGKFTEDELALVNQAIDLAVGACTLALTDSFN 178
Query: 179 SFLNH 183
+
Sbjct: 179 KVMTE 183
>gi|227873323|ref|ZP_03991585.1| aminoacyl-tRNA hydrolase [Oribacterium sinus F0268]
gi|227840838|gb|EEJ51206.1| aminoacyl-tRNA hydrolase [Oribacterium sinus F0268]
Length = 197
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 56/191 (29%), Positives = 102/191 (53%), Gaps = 3/191 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILI 59
M+++AGLGNP +Y RHN GF ID + + + KF ++ ++ +L+
Sbjct: 1 MWLIAGLGNPEKKYVGTRHNAGFAVIDVLCKELGNLSLESTKFRGAYTKTRIGSEEVLLL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ + ++K+P E+ LV+ D++ G +R++ G GHNGLK+I
Sbjct: 61 KPLTYMNLSGESIVPLAQYFKIPK-EHILVLSDEISFAPGDIRIRKKGSAGGHNGLKNII 119
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ + R+R+G+G + + HVL FS E+ + + A++ + ++
Sbjct: 120 AHLHSEEFPRIRLGVGAKGEKEDLAHHVLSPFSKAEQAEMEDAYERAAKACIAIVEKGID 179
Query: 179 SFLNHIVSVRK 189
+N +K
Sbjct: 180 QAMNEFNQKKK 190
>gi|289642499|ref|ZP_06474643.1| peptidyl-tRNA hydrolase [Frankia symbiont of Datisca glomerata]
gi|289507673|gb|EFD28628.1| peptidyl-tRNA hydrolase [Frankia symbiont of Datisca glomerata]
Length = 203
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 76/185 (41%), Positives = 116/185 (62%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG Y NRHNIGFM +D + + A+++E +L G+R +L KP
Sbjct: 14 WLVVGLGNPGPTYAGNRHNIGFMVLDLLAERVRDRFRTHRGRADVAEARLAGVRALLAKP 73
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
++FMN+SG + + F+K+ ++ + +V+HD+LD+ FGT+RLK GGGD GHNGL+S++
Sbjct: 74 RSFMNVSGSPVEALRAFFKV-DIGHIVVVHDELDIPFGTIRLKLGGGDNGHNGLRSVTAA 132
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y R+R+GIGRPP + VL +FS+PER L ++D A ++ L R
Sbjct: 133 LGSRDYLRVRVGIGRPPGRMNPADFVLRDFSAPERKELPFLVDRAADAVESLLDRGLEVT 192
Query: 181 LNHIV 185
N
Sbjct: 193 QNTFH 197
>gi|302534902|ref|ZP_07287244.1| peptidyl-tRNA hydrolase [Streptomyces sp. C]
gi|302443797|gb|EFL15613.1| peptidyl-tRNA hydrolase [Streptomyces sp. C]
Length = 197
Score = 242 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 79/190 (41%), Positives = 111/190 (58%), Gaps = 6/190 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD-----GLRT 56
+++ GLGNPG EY NRHNIGFM D + K A++ EG++ R
Sbjct: 9 WLIVGLGNPGAEYAGNRHNIGFMVADLLAERIGGKFKAHKARAQVVEGRMGPPGPLNRRV 68
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
++ KP +FMNLSG + + +FYK+P LE + +HD+LD+D+ TLRLK GGGD GHNGLK
Sbjct: 69 VIAKPLSFMNLSGGPVTALRDFYKVP-LERIVAVHDELDIDYATLRLKLGGGDNGHNGLK 127
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
S+++ G +Y R+R GIGRPP + VL +FSS ER L +D A ++ L +
Sbjct: 128 SMTKSMGADYHRVRCGIGRPPGRMQVADFVLRDFSSTERKELDWFVDRSADAVECLVQEG 187
Query: 177 DVSFLNHIVS 186
+ S
Sbjct: 188 LERAQSAYNS 197
>gi|209543255|ref|YP_002275484.1| peptidyl-tRNA hydrolase [Gluconacetobacter diazotrophicus PAl 5]
gi|209530932|gb|ACI50869.1| Aminoacyl-tRNA hydrolase [Gluconacetobacter diazotrophicus PAl 5]
Length = 192
Score = 242 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 76/186 (40%), Positives = 121/186 (65%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP +RHN+GFM +DRI + H F W+K+F E++EG++ + +L+K
Sbjct: 1 MLLWTGLGNPEPGMSRHRHNVGFMAVDRIATRHGFAPWRKRFRGEVAEGRVGTHKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ + FYK+P +E+ HD+LDL G +R+K GGG AGHNGL+S+ +
Sbjct: 61 PLTYMNLSGESVQQAAAFYKIP-VESITAFHDELDLAPGRVRVKRGGGAAGHNGLRSMDK 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++Y R+RIGIG P + HVLG+F+ ++ +L ++D ++ + P+LA +
Sbjct: 120 MLGSQDYWRVRIGIGHPGVRERVTGHVLGDFAKSDQDWLERMLDAMSDTAPVLADGQPEL 179
Query: 180 FLNHIV 185
F+ +
Sbjct: 180 FMTKMA 185
>gi|21221563|ref|NP_627342.1| peptidyl-tRNA hydrolase [Streptomyces coelicolor A3(2)]
gi|256787245|ref|ZP_05525676.1| peptidyl-tRNA hydrolase [Streptomyces lividans TK24]
gi|289771144|ref|ZP_06530522.1| peptidyl-tRNA hydrolase [Streptomyces lividans TK24]
gi|22095998|sp|Q9K3T8|PTH_STRCO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|8894758|emb|CAB95918.1| peptidyl-tRNA hydrolase [Streptomyces coelicolor A3(2)]
gi|289701343|gb|EFD68772.1| peptidyl-tRNA hydrolase [Streptomyces lividans TK24]
Length = 200
Score = 242 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 81/191 (42%), Positives = 112/191 (58%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLD-----GLR 55
++VAGLGNPG EY NRHN+GFM D + + K A++ EG++ R
Sbjct: 11 WLVAGLGNPGPEYASNRHNVGFMVADLLAERIGARFKRHGKAQAQVVEGRIGPPGPANRR 70
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
IL KP +FMN+SG + + +FYK+P + N + +HD+LD+D+G LRLK GGGD GHNGL
Sbjct: 71 VILAKPMSFMNVSGGPVTALRDFYKVP-VGNIVAVHDELDIDYGVLRLKLGGGDNGHNGL 129
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KSI++ G +Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 130 KSITKSLGADYHRVRFGIGRPPGRMPVADFVLRDFSSTERKELDYFVDRAADAVEALVIE 189
Query: 176 EDVSFLNHIVS 186
+ S
Sbjct: 190 GLERAQSAYNS 200
>gi|297200253|ref|ZP_06917650.1| peptidyl-tRNA hydrolase [Streptomyces sviceus ATCC 29083]
gi|197716993|gb|EDY61027.1| peptidyl-tRNA hydrolase [Streptomyces sviceus ATCC 29083]
Length = 200
Score = 242 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 79/191 (41%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLD-----GLR 55
+++ GLGNPG EY NRHN+GFM D + + K A++ EG++ R
Sbjct: 11 WLIVGLGNPGPEYAGNRHNVGFMVADLLAERVGGRFKRAGKAQAQVVEGRIGPPGPANRR 70
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L KP +FMNLSG + + +FYK+P + N + IHD+LD+D+G LRLK GGGD GHNGL
Sbjct: 71 VVLAKPMSFMNLSGGPVNALKDFYKVP-VANIVAIHDELDIDYGVLRLKLGGGDNGHNGL 129
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 130 KSMTKAFGAEYHRVRFGIGRPPGRMQVADFVLKDFSSSERKELDYFVDRAADAVEALVIE 189
Query: 176 EDVSFLNHIVS 186
+ S
Sbjct: 190 GLERAQSTYNS 200
>gi|171060170|ref|YP_001792519.1| peptidyl-tRNA hydrolase [Leptothrix cholodnii SP-6]
gi|238689108|sp|B1Y3Q1|PTH_LEPCP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|170777615|gb|ACB35754.1| Aminoacyl-tRNA hydrolase [Leptothrix cholodnii SP-6]
Length = 213
Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats.
Identities = 64/186 (34%), Positives = 96/186 (51%), Gaps = 3/186 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG EY RHN GF D + + +H ++ G L++P
Sbjct: 4 LFVGLGNPGPEYEATRHNAGFWWTDALARRWNCQLQPDRSYHGLMARCTQRGTPVWLLQP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ + F+K+ E LV+HD+LDL G ++LK GG AGHNGLK I +
Sbjct: 64 MTYMNLSGKSVAALARFFKIEPAE-ILVVHDELDLLPGQMKLKQGGSAAGHNGLKDIQAQ 122
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P A + +VL S ER + ID ++ + + +
Sbjct: 123 LGNPEFWRLRLGIGHPGVKAEVAAYVLRKPPSAEREAIEACIDRSLDAVDRMLGADMPAA 182
Query: 181 LNHIVS 186
+ + +
Sbjct: 183 MMQMHA 188
>gi|167039250|ref|YP_001662235.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X514]
gi|300913890|ref|ZP_07131207.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X561]
gi|307725425|ref|YP_003905176.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X513]
gi|238687630|sp|B0K466|PTH_THEPX RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166853490|gb|ABY91899.1| Aminoacyl-tRNA hydrolase [Thermoanaerobacter sp. X514]
gi|300890575|gb|EFK85720.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X561]
gi|307582486|gb|ADN55885.1| peptidyl-tRNA hydrolase [Thermoanaerobacter sp. X513]
Length = 184
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG EY RHN+GFM ID + K KF + + EG G + IL+K
Sbjct: 1 MYVIAGLGNPGREYEGTRHNVGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG++L + +NFYK+P LEN +VI+DD DLD G +R++ G GHNG+ SI
Sbjct: 61 PQTFMNSSGEALYDAVNFYKIP-LENVIVIYDDKDLDLGKIRIRKKGSSGGHNGMNSIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+RIGIG+P ++ HVLG F E+ + + A ++ + +
Sbjct: 120 LLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEH 177
Query: 180 FLNHIV 185
++
Sbjct: 178 AMSKFN 183
>gi|227822862|ref|YP_002826834.1| peptidyl-tRNA hydrolase [Sinorhizobium fredii NGR234]
gi|254783883|sp|C3MFM4|PTH_RHISN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|227341863|gb|ACP26081.1| peptidyl-tRNA hydrolase [Sinorhizobium fredii NGR234]
Length = 239
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 95/185 (51%), Positives = 126/185 (68%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D I F +W KKF AEI+EG++ G R +LIK
Sbjct: 1 MLIIAGLGNPGSKYAGNRHNIGFMAVDAIWQRQGFSSWSKKFKAEIAEGEIAGERVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+++ E M FYKL ++ +VI+D+LDL G R+K GGG GHNG+KSI
Sbjct: 61 PQTFMNLSGEAVGEAMRFYKLAP-KDIVVIYDELDLIAGKARIKIGGGHGGHNGIKSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CGK Y+RLR+GIG P + HVLG+F+ ++ +L ++D IA + +L K ED
Sbjct: 120 HCGKEYRRLRLGIGHPGVKDLVHAHVLGDFAKADQAWLSSLLDTIADNAGMLVKGEDSQL 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNKIA 184
>gi|149177253|ref|ZP_01855859.1| peptidyl-tRNA hydrolase [Planctomyces maris DSM 8797]
gi|148843967|gb|EDL58324.1| peptidyl-tRNA hydrolase [Planctomyces maris DSM 8797]
Length = 189
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 107/188 (56%), Gaps = 3/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHN+GF + ++ +H P + +F AE++E G + +L+
Sbjct: 1 MKVVVGLGNPGKKYERTRHNVGFEVLSQLAEWHGAPGSRSQFEAEVTEISCGGDKVLLVA 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ V F+KLP + +V+ DD++L G LRL+ G G GL+ I +
Sbjct: 61 PQTFMNLSGRSVAAVAKFFKLP-ATDVMVVCDDMNLPVGRLRLRGSGSAGGQKGLQDIIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFS-SPERYFLLPIIDNIARSLPLLAKREDV 178
K G ++ RLR+G+GRPP +VLG F E + +DN AR + +
Sbjct: 120 KLGTQDVPRLRVGVGRPPAGFSAADYVLGRFQGKQEFELIATAVDNAARGIECWVQSGLE 179
Query: 179 SFLNHIVS 186
+N + +
Sbjct: 180 MAMNQVNA 187
>gi|307944187|ref|ZP_07659528.1| peptidyl-tRNA hydrolase [Roseibium sp. TrichSKD4]
gi|307772533|gb|EFO31753.1| peptidyl-tRNA hydrolase [Roseibium sp. TrichSKD4]
Length = 241
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 84/186 (45%), Positives = 121/186 (65%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG Y NRHNIGFM ++ IH H F W+ +F AE+SEG+L + +L+
Sbjct: 1 MKLIVGLGNPGSNYAGNRHNIGFMAVNEIHRVHSSFAPWRARFQAEVSEGRLGSEKALLM 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG+++ E M FYK+ E+ VI+D+LDL R+K GGG GHNGL+SIS
Sbjct: 61 KPSTYMNESGRAVGEAMRFYKIEP-EDIAVIYDELDLPPAKFRMKAGGGHGGHNGLRSIS 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G++Y+RLR+GIG P D + +VLG+F+ + +L P++ IA + +LA +D
Sbjct: 120 AHIGQDYRRLRLGIGHPGDKKLVSNYVLGDFAKADSDWLEPLLREIADNADMLAAGQDSQ 179
Query: 180 FLNHIV 185
F N +
Sbjct: 180 FANKLT 185
>gi|307693779|ref|ZP_07636016.1| peptidyl-tRNA hydrolase [Ruminococcaceae bacterium D16]
Length = 185
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 102/185 (55%), Gaps = 3/185 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ LGNPG +Y RHN+GFM D++ + P K KF A + + G + +++KP
Sbjct: 1 MLVCLGNPGDQYENTRHNVGFMVADQLGERYRLPIQKLKFKALTNVFTISGEKVLVMKPV 60
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG+++ +FYK+P E+ +VI DD LD G LR++ G GHNGLKSI +
Sbjct: 61 TYMNLSGEAVRPAADFYKIPP-EHIIVISDDTALDVGKLRIRKSGSAGGHNGLKSIIQHL 119
Query: 123 GKN-YKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + + R+R+G+G+ P + VLG F +R + ++ A ++ K
Sbjct: 120 GTDQFPRIRVGVGKKPHPDYDLADWVLGKFQGEDRKAIAAAVERCADAVECYIKEGPDRA 179
Query: 181 LNHIV 185
+N
Sbjct: 180 MNKFN 184
>gi|154496045|ref|ZP_02034741.1| hypothetical protein BACCAP_00329 [Bacteroides capillosus ATCC
29799]
gi|150274600|gb|EDN01664.1| hypothetical protein BACCAP_00329 [Bacteroides capillosus ATCC
29799]
Length = 196
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 61/186 (32%), Positives = 102/186 (54%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V LGNPG +Y RHN+GFM D + P + KF A + QL G + +L+KP
Sbjct: 12 WLVVCLGNPGDKYENTRHNVGFMVADELAERKNIPVQRLKFKALTNTTQLGGAQVLLMKP 71
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + +FYK+ + ++ LV+ DD+ L G LR++ G GHNGLK+I ++
Sbjct: 72 VTYMNLSGEAVRQAADFYKV-SPDHVLVVSDDVSLPVGRLRIRKSGSAGGHNGLKNIIQQ 130
Query: 122 CGKN-YKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + RL++G+G P + VLG F ++ + I A ++ +
Sbjct: 131 LGTDQFPRLKVGVGEKPHPDYDLADWVLGKFVGEDKKTIDAAIKRAADAVECYIQDGPDK 190
Query: 180 FLNHIV 185
++
Sbjct: 191 AMSRFN 196
>gi|294852854|ref|ZP_06793527.1| peptidyl-tRNA hydrolase [Brucella sp. NVSL 07-0026]
gi|294821443|gb|EFG38442.1| peptidyl-tRNA hydrolase [Brucella sp. NVSL 07-0026]
Length = 250
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 95/190 (50%), Positives = 129/190 (67%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + L+K
Sbjct: 1 MLLIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVSLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKLTPA-DLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDA 119
Query: 121 KC-----GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+R
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLMGAVADNVAMLARR 179
Query: 176 EDVSFLNHIV 185
ED SF+N I
Sbjct: 180 EDNSFMNRIA 189
>gi|291166312|gb|EFE28358.1| aminoacyl-tRNA hydrolase [Filifactor alocis ATCC 35896]
Length = 186
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNPG +Y RHNIGF+ ID + K KF A + EG++ + +L+K
Sbjct: 1 MYIIVGLGNPGKKYERTRHNIGFLTIDELSRRTGIIPNKLKFKASVGEGRIGTEKVVLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E+M+FYK+ + + +VI+DD+DL+ G LR++ G HNG+++I
Sbjct: 61 PQTFMNLSGESVRELMSFYKV-DHDKLIVIYDDIDLEVGKLRIRKKGSSGTHNGMRNIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ R R+GI ++ +VLGNF E + I+ A ++ L K
Sbjct: 120 LLGYDDFPRFRVGISGENRRGNLADYVLGNFLKEEIPSVADSIERCADAIECLMKDGIEL 179
Query: 180 FLNHIV 185
+
Sbjct: 180 AMTRYN 185
>gi|158321664|ref|YP_001514171.1| peptidyl-tRNA hydrolase [Alkaliphilus oremlandii OhILAs]
gi|167011988|sp|A8MK43|PTH_ALKOO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|158141863|gb|ABW20175.1| Aminoacyl-tRNA hydrolase [Alkaliphilus oremlandii OhILAs]
Length = 185
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 109/186 (58%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+ GLGNPG +Y RHNIGF ID + + K K A EG + G + +L+K
Sbjct: 1 MHIIVGLGNPGKKYDATRHNIGFEAIDMLAKRNNIEVKKLKHKALCGEGTIGGNKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQSLL+++ FYK+ + +N +V++DD+D+ GTLR++ G HNG+KSI
Sbjct: 61 PQTFMNLSGQSLLDIVQFYKV-DPKNIVVLYDDIDIPVGTLRIREKGSSGTHNGMKSIIY 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+RIG+G+P + +VLG F E +L ++ ++++ L K
Sbjct: 120 LLQTDQFPRIRIGVGKP-QFGDLADYVLGRFPKEEIPTMLETLERASQAVETLVKDGIAV 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 SMNRYN 184
>gi|220908888|ref|YP_002484199.1| aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7425]
gi|219865499|gb|ACL45838.1| Aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7425]
Length = 213
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 104/185 (56%), Gaps = 6/185 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHNIGFM +D + K+F AE EG + G L+KP
Sbjct: 14 LIVGLGNPGEKYYRTRHNIGFMVVDALADRWHISLSPHKRFQAEFGEGAVRGATVQLLKP 73
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ V+++YK + ++ LV++DD+DL G LRL+ G GHNG++S+
Sbjct: 74 TTYMNNSGQSVRAVLDWYKR-SPQSVLVVYDDMDLPLGKLRLRLNGSAGGHNGMRSLIAH 132
Query: 122 CG-KNYKRLRIGIGRP---PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G +++ RLR+GIG P I HVLG FS E + +++ +++ +
Sbjct: 133 LGTQDFPRLRLGIGNPRQAGGEKDAIPHVLGKFSPAEGPIVAEVLELATKAIETSLRDGV 192
Query: 178 VSFLN 182
+N
Sbjct: 193 EKAMN 197
>gi|302388650|ref|YP_003824471.1| peptidyl-tRNA hydrolase [Thermosediminibacter oceani DSM 16646]
gi|302199278|gb|ADL06848.1| peptidyl-tRNA hydrolase [Thermosediminibacter oceani DSM 16646]
Length = 187
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 74/189 (39%), Positives = 106/189 (56%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG EY E RHN+GFM +D + + K KF + EG +G + +L+K
Sbjct: 1 MFLIVGLGNPGREYEETRHNVGFMVLDSLAAELGIKVDKVKFKGLLGEGVYEGKKLLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQS++E + FYK+P EN +VI+DD+DL G LR++ G G G++SI
Sbjct: 61 PMTYMNNSGQSVVEAVKFYKIPP-ENLVVIYDDMDLPVGRLRVRGSGSSGGQKGMESIIY 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ R+RIGIGRP +I HVLG F ER + +ID + + +
Sbjct: 120 HIATEGFPRIRIGIGRP--KGDVINHVLGRFDKEERKKIDAVIDAAVGAALTIVQHGVQE 177
Query: 180 FLNHIVSVR 188
+N
Sbjct: 178 AMNRYNGFE 186
>gi|331268337|ref|YP_004394829.1| aminoacyl-tRNA hydrolase [Clostridium botulinum BKT015925]
gi|329124887|gb|AEB74832.1| Aminoacyl-tRNA hydrolase [Clostridium botulinum BKT015925]
Length = 186
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 63/184 (34%), Positives = 106/184 (57%), Gaps = 3/184 (1%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFM 65
GLGNPG EY RHN+GF I+ + + +KKF +G + G + IL+KP T+M
Sbjct: 2 GLGNPGKEYEHTRHNVGFDAIELLAEKYNIEFNRKKFKGMYGDGTIAGEKVILLKPLTYM 61
Query: 66 NLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN 125
NLSG+S+ EVM+FYK+ N E+ +VI+DD+ L+ G +R++ G GHNG+K+I +
Sbjct: 62 NLSGESVREVMDFYKITN-EDIIVIYDDISLEVGRMRIREKGSAGGHNGIKNIIAHLNTD 120
Query: 126 -YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHI 184
+ R+++G+G P +++ HVLG F + L + ++ ++ ++ +N
Sbjct: 121 HFPRVKVGVGHP-VKTNLVSHVLGKFEKEDECKLNKTFEAACNAVQIIIEKGTAEAMNKF 179
Query: 185 VSVR 188
+
Sbjct: 180 NGFK 183
>gi|307265092|ref|ZP_07546652.1| peptidyl-tRNA hydrolase [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919890|gb|EFN50104.1| peptidyl-tRNA hydrolase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 184
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 75/186 (40%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG EY RHNIGFM ID + K KF + + EG G + IL+K
Sbjct: 1 MYVIAGLGNPGKEYEGTRHNIGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG++L + +NFYK+ LEN +VI+DD DLD G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNSSGEALYDAVNFYKIL-LENVIVIYDDKDLDVGKIRIRKKGSSGGHNGMKSIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+RIGIG+P ++ HVLG F E+ + + A ++ + +
Sbjct: 120 LLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEH 177
Query: 180 FLNHIV 185
++
Sbjct: 178 AMSKFN 183
>gi|269797672|ref|YP_003311572.1| peptidyl-tRNA hydrolase [Veillonella parvula DSM 2008]
gi|269094301|gb|ACZ24292.1| peptidyl-tRNA hydrolase [Veillonella parvula DSM 2008]
Length = 192
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + +HNIGFM ID I W+++ AE+ +DG + +L+K
Sbjct: 1 MKLVVGLGNPGKQYEKTKHNIGFMVIDAIADSAPHTPWREEQRAEVCSITVDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ +M +YK+ + + I+DD+DL G LR++ G GHNG+KS+
Sbjct: 61 PQTFMNLSGESVGPLMRYYKI-DPSDVYCIYDDMDLPIGKLRIRPNGSSGGHNGIKSLIS 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ R R+GIGRP +I HVL FS + + I + +++ +
Sbjct: 120 HIGTENFPRFRVGIGRPLPQWTVIDHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDK 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 GMNQFN 185
>gi|160900867|ref|YP_001566449.1| peptidyl-tRNA hydrolase [Delftia acidovorans SPH-1]
gi|238687171|sp|A9BP19|PTH_DELAS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|160366451|gb|ABX38064.1| Aminoacyl-tRNA hydrolase [Delftia acidovorans SPH-1]
Length = 207
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 64/181 (35%), Positives = 95/181 (52%), Gaps = 3/181 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG EY + RHN GF ID + ++ + ++ + G L++
Sbjct: 3 KLFVGLGNPGPEYEDTRHNAGFWWIDALARELKVQLVPERSYFGLMARASVRGENVWLLQ 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ + F+K+ E LV+HD+LD + G ++LK GG GHNGL+ I
Sbjct: 63 PQTFMNLSGKSVGALARFFKI-QPEEVLVVHDELDFEPGQVKLKRGGSHGGHNGLRDIHA 121
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLRIGIG P A + VL + +R + I + ++ P L
Sbjct: 122 QLGSADYWRLRIGIGHPGHKAEVANWVLKKPAPDQRQLIEDSIAHSLKAWPELQAGNMDK 181
Query: 180 F 180
Sbjct: 182 A 182
>gi|290959808|ref|YP_003490990.1| aminoacyl-tRNA hydrolase [Streptomyces scabiei 87.22]
gi|260649334|emb|CBG72449.1| aminoacyl-tRNA hydrolase [Streptomyces scabiei 87.22]
Length = 200
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 80/191 (41%), Positives = 111/191 (58%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLD-----GLR 55
+++AGLGNPG EY NRHN+GFM D + + K A++ EG++ R
Sbjct: 11 WLIAGLGNPGPEYAANRHNVGFMVADLLAERIGGRFKRAGKAQAQVVEGRIGPPGPANRR 70
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
IL KP +FMNLSG + + +FYK+P + N + IHD+LD+D+G LRLK GGGD GHNGL
Sbjct: 71 VILAKPMSFMNLSGGPVTALRDFYKVP-VANIVAIHDELDIDYGVLRLKLGGGDNGHNGL 129
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G +Y R+R GIGRPP + VL +FS+ ER L +D A ++ L
Sbjct: 130 KSMTKAMGSDYHRVRFGIGRPPGRMQVADFVLKDFSATERKELDYFVDRAADAVECLVIE 189
Query: 176 EDVSFLNHIVS 186
S
Sbjct: 190 GLERAQGTYNS 200
>gi|288942089|ref|YP_003444329.1| peptidyl-tRNA hydrolase [Allochromatium vinosum DSM 180]
gi|288897461|gb|ADC63297.1| peptidyl-tRNA hydrolase [Allochromatium vinosum DSM 180]
Length = 194
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 3/188 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GF ++ I + KF E++ ++ G L+KP
Sbjct: 8 LIVGLGNPGAQYEATRHNVGFWWVEAIARAQGESFRAEPKFLGELARVRIAGQDVRLLKP 67
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS++ V ++ +P E L+ HD+LDL G R+K GGG AGHNGL+
Sbjct: 68 STYMNRSGQSVVAVARYFDIPP-ERILIAHDELDLPVGVARIKQGGGHAGHNGLRDSISA 126
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + + RLRIGI P D + +VLG S + + +D+ R L L + +
Sbjct: 127 LGSREFWRLRIGIAHPGDRTLVTGYVLGRPSRDDESRIRESLDDADRRLAELVEGQFQLA 186
Query: 181 LNHIVSVR 188
+N + S R
Sbjct: 187 MNRLHSQR 194
>gi|254515308|ref|ZP_05127369.1| peptidyl-tRNA hydrolase [gamma proteobacterium NOR5-3]
gi|219677551|gb|EED33916.1| peptidyl-tRNA hydrolase [gamma proteobacterium NOR5-3]
Length = 208
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 65/188 (34%), Positives = 96/188 (51%), Gaps = 4/188 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN G + + + K+H E+ E G + L+ P
Sbjct: 7 LIVGLGNPGSQYEGTRHNAGEDFVRELARVAGGSLKTESKYHGEVGEVFFAGHKLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ + NFYK+ L+ HD+LD+ G+ R K GG GHNGL+ I
Sbjct: 67 HTFMNRSGKAVAALANFYKIEPP-QILIAHDELDMPPGSARFKFDGGHGGHNGLRDIVPA 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLR+GIG P + +VL S +R + ID R+LPLL +
Sbjct: 126 LGNRKDFHRLRVGIGHPGSAKQVSNYVLSKASPADREAITASIDEAIRALPLLLDGDAGK 185
Query: 180 FLNHIVSV 187
+ + S
Sbjct: 186 AMTRLHSF 193
>gi|256389403|ref|YP_003110967.1| peptidyl-tRNA hydrolase [Catenulispora acidiphila DSM 44928]
gi|256355629|gb|ACU69126.1| peptidyl-tRNA hydrolase [Catenulispora acidiphila DSM 44928]
Length = 198
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 80/190 (42%), Positives = 112/190 (58%), Gaps = 4/190 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTIL 58
++++AGLGNPG Y NRHN GFM +D + + K A++ EG+L G R +L
Sbjct: 10 LWLIAGLGNPGPGYAGNRHNAGFMVVDLLAARVGGKFKSHKARADVVEGRLGVGGPRVVL 69
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
KP+TFMNLSG + + +FYK+ + +HD+LD+D+G LRLK GGGD GHNGL+SI
Sbjct: 70 AKPKTFMNLSGGPVKALRDFYKIEPA-QIIAVHDELDVDYGVLRLKLGGGDNGHNGLRSI 128
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+ G K Y R+R G+GRPP VL +FSS E+ L +D A ++ L +R
Sbjct: 129 TSSLGTKEYHRVRFGVGRPPGRQDPADFVLKDFSSTEKKDLDYNVDRAADAVEDLIRRGL 188
Query: 178 VSFLNHIVSV 187
V N +
Sbjct: 189 VEAQNIYHAA 198
>gi|289579381|ref|YP_003478008.1| peptidyl-tRNA hydrolase [Thermoanaerobacter italicus Ab9]
gi|289529094|gb|ADD03446.1| peptidyl-tRNA hydrolase [Thermoanaerobacter italicus Ab9]
Length = 189
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 78/190 (41%), Positives = 112/190 (58%), Gaps = 4/190 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNPG EY + RHNIGFM ID + K KF + + E G + IL+K
Sbjct: 1 MFIIAGLGNPGIEYEQTRHNIGFMVIDELAKKLGINVTKLKFKSLMGEDYFKGEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG++L E +NFYK+P LEN +VI+DD DLD G +R++ G GHNG+ SI
Sbjct: 61 PQTFMNSSGEALYEAVNFYKIP-LENVIVIYDDKDLDVGKIRIRKKGSSGGHNGMNSIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+RIGIG+P ++ HVLG F E+ + + A ++ + +
Sbjct: 120 LLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEH 177
Query: 180 FLNHIVSVRK 189
++ ++K
Sbjct: 178 AMSKFNGLQK 187
>gi|83313446|ref|YP_423710.1| peptidyl-tRNA hydrolase [Magnetospirillum magneticum AMB-1]
gi|119390956|sp|Q2VZ24|PTH_MAGMM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|82948287|dbj|BAE53151.1| Peptidyl-tRNA hydrolase [Magnetospirillum magneticum AMB-1]
Length = 234
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 121/185 (65%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y NRHNIGFM D + + F W+ KF E++EG + G + I +K
Sbjct: 1 MLLVVGLGNPGSDYARNRHNIGFMAADVLVRRYSFGPWRSKFQGEVAEGIIGGEKVIALK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQS+ F K+P +++ +V+HD+LD+ G L++K GGG GHNGLKSI
Sbjct: 61 PQTYMNLSGQSVAAAARFLKVP-VDDIIVLHDELDVAPGRLKVKRGGGAGGHNGLKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+NY+R+R+GIG P D + +VL +F+ + +L+P++D +A + P+L +D F
Sbjct: 120 HLGQNYRRVRLGIGHPGDRDLVSGYVLHDFAKADEAWLVPVLDAVADTFPMLVSGDDAGF 179
Query: 181 LNHIV 185
+
Sbjct: 180 ATRVA 184
>gi|222871034|gb|EEF08165.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 64/181 (35%), Positives = 95/181 (52%), Gaps = 3/181 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG EY + RHN GF ID + ++ + ++ + G L++
Sbjct: 3 KLFVGLGNPGPEYEDTRHNAGFWWIDALARELKVQLVPERSYFGLMARANVRGENVWLLQ 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ + F+K+ E LV+HD+LD + G ++LK GG GHNGL+ I
Sbjct: 63 PQTFMNLSGKSVGALARFFKI-QPEEVLVVHDELDFEPGQVKLKRGGSHGGHNGLRDIHA 121
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLRIGIG P A + VL + +R + I + ++ P L
Sbjct: 122 QLGSADYWRLRIGIGHPGHKAEVANWVLKKPAPDQRQLIEDSIAHSLKAWPELQAGNMDK 181
Query: 180 F 180
Sbjct: 182 A 182
>gi|256114110|ref|ZP_05454864.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 3 str. Ether]
gi|265995428|ref|ZP_06107985.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 3 str. Ether]
gi|262766541|gb|EEZ12330.1| peptidyl-tRNA hydrolase [Brucella melitensis bv. 3 str. Ether]
Length = 250
Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 94/190 (49%), Positives = 129/190 (67%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +L+K
Sbjct: 1 MLLIAGLGNPGPQYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + +VI+D+L L G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKLTPA-DLVVIYDELALVPGKLRIKTGGGSGGHNGIKSIDA 119
Query: 121 KC-----GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+R
Sbjct: 120 HMQSFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLMGAVADNVAMLARR 179
Query: 176 EDVSFLNHIV 185
ED SF+N I
Sbjct: 180 EDNSFMNRIA 189
>gi|304391296|ref|ZP_07373240.1| peptidyl-tRNA hydrolase [Ahrensia sp. R2A130]
gi|303296652|gb|EFL91008.1| peptidyl-tRNA hydrolase [Ahrensia sp. R2A130]
Length = 246
Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 84/185 (45%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG + RHN+GF+ +D I + H F WK +F A EG++ + +L+K
Sbjct: 1 MLIIAGLGNPGPTHEHQRHNVGFVAVDAIAAEHNFSPWKPRFQALACEGRIGNEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E FYK+ + ++D+LDL G LR+KTGGG GHNG++SI
Sbjct: 61 PTTFMNESGRSVGEAARFYKIDEAA-VIALYDELDLAPGKLRIKTGGGAGGHNGIRSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
GKNY+R+RIGIG P + HVLGNF+ + +L P++D IAR+ +L +D F
Sbjct: 120 HLGKNYRRVRIGIGHPGHKDRVTGHVLGNFAKADHDWLDPLLDEIARNADMLVSGDDAGF 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 MNRIA 184
>gi|302560228|ref|ZP_07312570.1| peptidyl-tRNA hydrolase [Streptomyces griseoflavus Tu4000]
gi|302477846|gb|EFL40939.1| peptidyl-tRNA hydrolase [Streptomyces griseoflavus Tu4000]
Length = 202
Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 78/191 (40%), Positives = 112/191 (58%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLD-----GLR 55
+++ GLGNPG EY NRHN+GFM D + + K A++ EG++ G R
Sbjct: 13 WLIVGLGNPGPEYAMNRHNVGFMVADLLAERIGARFKRAGKAQAQVLEGRIGPPGPAGRR 72
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L KP ++MNLSG + + FYK+P +E + +HD+LD+D+GTLRLK GGGD GHNGL
Sbjct: 73 VVLAKPMSYMNLSGGPVNALREFYKVP-VERVVAVHDELDIDYGTLRLKLGGGDNGHNGL 131
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G++Y R+R GIGRPP + VL +F+S ER L +D A ++ L
Sbjct: 132 KSMTKAFGRDYHRVRFGIGRPPGRMQVADFVLKDFASAERKELDYFVDRAADAVECLVIE 191
Query: 176 EDVSFLNHIVS 186
S
Sbjct: 192 GLERAQGTYNS 202
>gi|257470432|ref|ZP_05634523.1| peptidyl-tRNA hydrolase [Fusobacterium ulcerans ATCC 49185]
gi|317064640|ref|ZP_07929125.1| peptidyl-tRNA hydrolase [Fusobacterium ulcerans ATCC 49185]
gi|313690316|gb|EFS27151.1| peptidyl-tRNA hydrolase [Fusobacterium ulcerans ATCC 49185]
Length = 186
Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 71/186 (38%), Positives = 103/186 (55%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHNIGF I+++ K KF +SE +DG + + +K
Sbjct: 1 MKLIVGLGNPGDKYAKTRHNIGFEVINKLQKDLNIIGEKDKFQGLLSEKNIDGEKVLFLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG S+ V+NFYK+ + +VI+DD+DL G LR+K G GHNG+KSI
Sbjct: 61 PQTFMNLSGNSIAAVINFYKIDAKNDMIVIYDDMDLPVGKLRVKEKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDVS 179
G + R++ GIG+ I VLG F E+ + +I+N + L + E
Sbjct: 121 HLGDEFLRIKCGIGK--SKDDTIDFVLGQFDKSEQETVDKMIENASNCALDLVRDVELGR 178
Query: 180 FLNHIV 185
+
Sbjct: 179 IMQKYN 184
>gi|69245442|ref|ZP_00603437.1| Peptidyl-tRNA hydrolase [Enterococcus faecium DO]
gi|257879853|ref|ZP_05659506.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,230,933]
gi|257882579|ref|ZP_05662232.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,502]
gi|257886023|ref|ZP_05665676.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,501]
gi|257891694|ref|ZP_05671347.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,410]
gi|258614281|ref|ZP_05712051.1| peptidyl-tRNA hydrolase [Enterococcus faecium DO]
gi|260559526|ref|ZP_05831707.1| peptidyl-tRNA hydrolase [Enterococcus faecium C68]
gi|261206677|ref|ZP_05921375.1| peptidyl-tRNA hydrolase [Enterococcus faecium TC 6]
gi|289565038|ref|ZP_06445492.1| peptidyl-tRNA hydrolase [Enterococcus faecium D344SRF]
gi|293553691|ref|ZP_06674315.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1039]
gi|293563192|ref|ZP_06677648.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1162]
gi|293570114|ref|ZP_06681194.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1071]
gi|294614901|ref|ZP_06694792.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1636]
gi|294618627|ref|ZP_06698166.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1679]
gi|294623703|ref|ZP_06702536.1| peptidyl-tRNA hydrolase [Enterococcus faecium U0317]
gi|314938216|ref|ZP_07845516.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133a04]
gi|314943111|ref|ZP_07849910.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133C]
gi|314949308|ref|ZP_07852651.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0082]
gi|314952241|ref|ZP_07855256.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133A]
gi|314992099|ref|ZP_07857549.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133B]
gi|314996282|ref|ZP_07861338.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133a01]
gi|68195824|gb|EAN10260.1| Peptidyl-tRNA hydrolase [Enterococcus faecium DO]
gi|257814081|gb|EEV42839.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,230,933]
gi|257818237|gb|EEV45565.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,502]
gi|257821879|gb|EEV49009.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,501]
gi|257828054|gb|EEV54680.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,410]
gi|260074625|gb|EEW62946.1| peptidyl-tRNA hydrolase [Enterococcus faecium C68]
gi|260079170|gb|EEW66863.1| peptidyl-tRNA hydrolase [Enterococcus faecium TC 6]
gi|289163245|gb|EFD11091.1| peptidyl-tRNA hydrolase [Enterococcus faecium D344SRF]
gi|291587486|gb|EFF19370.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1071]
gi|291592187|gb|EFF23805.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1636]
gi|291595146|gb|EFF26484.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1679]
gi|291596918|gb|EFF28136.1| peptidyl-tRNA hydrolase [Enterococcus faecium U0317]
gi|291602266|gb|EFF32494.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1039]
gi|291604842|gb|EFF34320.1| peptidyl-tRNA hydrolase [Enterococcus faecium E1162]
gi|313589526|gb|EFR68371.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133a01]
gi|313593313|gb|EFR72158.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133B]
gi|313595636|gb|EFR74481.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133A]
gi|313598170|gb|EFR77015.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133C]
gi|313642412|gb|EFS06992.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0133a04]
gi|313644314|gb|EFS08894.1| peptidyl-tRNA hydrolase [Enterococcus faecium TX0082]
Length = 186
Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HNIGFM +D+I H K F AE++E +G + +L+K
Sbjct: 1 MKMIVGLGNPGTKYQYTKHNIGFMVVDKIAREHQATFKKNPFEAEVAEFFHNGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M ++ + E +VI+DDLDL G +RL+ G GHNG+KSI
Sbjct: 61 PQTFMNESGRAVGPLMTYFGIYP-EELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
N + R+++GIGRP +++HVL FS + + + +++ L + V
Sbjct: 120 HLNTNVFDRIKVGIGRPEGKKTVVQHVLSPFSKENQPLIEESMCQSVKAVEYLIEGHSFV 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 DAMNRFN 186
>gi|300214983|gb|ADJ79399.1| Peptidyl-tRNA hydrolase (PTH) [Lactobacillus salivarius CECT 5713]
Length = 185
Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 106/189 (56%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN+GFM ++R H K+KF + I+E ++G + I+IK
Sbjct: 1 MKMIVGLGNIGKKYEGTRHNVGFMVVERFVEEHGGNFNKEKFDSLIAELFINGEKIIVIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M+++ L E+ ++ HDD+DL+ G LRL+ G GHNG+KSI
Sbjct: 61 PTTYMNESGRAVRPLMDYFNLTT-EDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +KR+R+GI P ++ VL F+ + L + +L + +D
Sbjct: 120 HVGTEKFKRVRVGIDHP-QKMSVVDWVLSRFTKEQEAKLDDGLTRAVAALDDWIENDD-- 176
Query: 180 FLNHIVSVR 188
F+N +
Sbjct: 177 FMNTMNRFN 185
>gi|162455218|ref|YP_001617585.1| hypothetical protein sce6936 [Sorangium cellulosum 'So ce 56']
gi|189038167|sp|A9GXK1|PTH_SORC5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|161165800|emb|CAN97105.1| pth [Sorangium cellulosum 'So ce 56']
Length = 223
Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats.
Identities = 77/185 (41%), Positives = 112/185 (60%), Gaps = 4/185 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY +RHN+GFM ID + +++KF + ++ G + IL+K
Sbjct: 1 MLLVVGLGNPGKEYAAHRHNVGFMAIDALADEVRADPFREKFSGVHARAEIAGQQAILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ M F+K+ E +V+HD+LDL FGT+RLK GGG AGHNGL+SI
Sbjct: 61 PMTYMNESGRSVQPAMAFFKVAPSE-LIVLHDELDLPFGTVRLKVGGGHAGHNGLRSIIS 119
Query: 121 KCGK-NYKRLRIGIGRPPD--TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G N+ R+R+G+GRPP + +VL F + ER L + +S+ +A R
Sbjct: 120 HGGTGNFGRVRLGVGRPPAGFRGEVADYVLSGFDAVERASLPDCLKQAVQSVLEVAARGF 179
Query: 178 VSFLN 182
+ +N
Sbjct: 180 EAAMN 184
>gi|75910645|ref|YP_324941.1| peptidyl-tRNA hydrolase [Anabaena variabilis ATCC 29413]
gi|119390911|sp|Q3M4P0|PTH_ANAVT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|75704370|gb|ABA24046.1| peptidyl-tRNA hydrolase [Anabaena variabilis ATCC 29413]
Length = 213
Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 106/193 (54%), Gaps = 9/193 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQL-DGLRTILIK 60
++ GLGNP +Y + RHNIGF +D + + +KF + EG G++ L+K
Sbjct: 15 LIVGLGNPEPKYDQTRHNIGFAAVDALARAWNISLAENRKFQGQYGEGTAPGGVKIRLLK 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ V ++YKL + E+ LVI+DDLDL G RL+ G GHNG+KS
Sbjct: 75 PLTYMNRSGQAIQAVTSWYKL-SGESVLVIYDDLDLPLGKTRLRLSGSAGGHNGMKSAIA 133
Query: 121 KCG-KNYKRLRIGIGRP-----PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+N+ RLRIGIG+P D + + HVLG FS+ E + ++ + + L K
Sbjct: 134 HLSTQNFPRLRIGIGKPKNAVNGDNSETVSHVLGKFSATETQLMSLVLQFVVECVELSLK 193
Query: 175 REDVSFLNHIVSV 187
+ +N S
Sbjct: 194 QGVEKAMNRCNSY 206
>gi|89073086|ref|ZP_01159625.1| peptidyl-tRNA hydrolase [Photobacterium sp. SKA34]
gi|89051039|gb|EAR56496.1| peptidyl-tRNA hydrolase [Photobacterium sp. SKA34]
Length = 196
Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats.
Identities = 64/189 (33%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G ++ + H K+ ++G L+ P
Sbjct: 7 LLVGLANPGQEYANTRHNAGAWVVEELARVHNVTLRPDPKYFGLTGRITVNGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + NF+++ E LV HD+LDL G + K GG GHNGL+ I K
Sbjct: 67 STFMNLSGKSVAALANFFQIKP-EEILVAHDELDLPPGVAKFKKSGGHGGHNGLRDIINK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLRI IG P D + +VLG + E+ + +D R + +L K
Sbjct: 126 MGNNKDFYRLRIAIGHPGDKNRVAGYVLGKAPAKEQELIDAAVDESVRCIDILLKDGLTK 185
Query: 180 FLNHIVSVR 188
N + + +
Sbjct: 186 AQNRLHTFK 194
>gi|222054665|ref|YP_002537027.1| Aminoacyl-tRNA hydrolase [Geobacter sp. FRC-32]
gi|254783870|sp|B9M5U5|PTH_GEOSF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|221563954|gb|ACM19926.1| Aminoacyl-tRNA hydrolase [Geobacter sp. FRC-32]
Length = 191
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 81/186 (43%), Positives = 116/186 (62%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
I+ GLGNPG +Y RHN GFM +DR+ KK F EG G R IL+KP
Sbjct: 4 KIIVGLGNPGPKYQWTRHNAGFMVLDRLSHLAGIAISKKTFSGVCGEGNWQGERLILLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S E + F+KLP +E+ +VIHDDLD+ FG ++LK GGG AGHNGL+S++++
Sbjct: 64 QTFMNLSGRSAAEAIRFHKLP-IEDLIVIHDDLDIPFGRVKLKQGGGHAGHNGLRSLAQE 122
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ R+R+GIGRP ++ +VL NFS E L ++D + + +LA+
Sbjct: 123 LGSGDFVRVRVGIGRPVH-GDVVNYVLNNFSPEEMASLPRLLDGVVDLVEMLAREGLPKT 181
Query: 181 LNHIVS 186
++ +
Sbjct: 182 MSLYNN 187
>gi|225455878|ref|XP_002275254.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 205
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 103/189 (54%), Gaps = 3/189 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D I F + +G + + +L KP
Sbjct: 11 WLLVGLGNPGKKYNGTRHNVGFEMVDAIAEAEGISISSVSFKSLFGKGFIGNVPVMLAKP 70
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN+SG+S+ ++++YK+P L+ LVI DDLDL F LRL GG GHNG++S+ +
Sbjct: 71 QTFMNVSGESVGAIVSYYKIP-LKQVLVIFDDLDLPFSKLRLLPKGGHGGHNGMRSVIDH 129
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ RLRIGIGRPP VL FS ER L N ++ +L
Sbjct: 130 FKGSRDFPRLRIGIGRPPGKMDTANFVLSPFSKREREELDFTFQNGVEAVRILLLEGFNK 189
Query: 180 FLNHIVSVR 188
+ + + +
Sbjct: 190 SASFVNTAK 198
>gi|153008960|ref|YP_001370175.1| peptidyl-tRNA hydrolase [Ochrobactrum anthropi ATCC 49188]
gi|151560848|gb|ABS14346.1| Aminoacyl-tRNA hydrolase [Ochrobactrum anthropi ATCC 49188]
Length = 251
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 97/191 (50%), Positives = 129/191 (67%), Gaps = 7/191 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM D I H F W+KKF AEI++G +DG + +L+K
Sbjct: 1 MLLIAGLGNPGPKYAHNRHNIGFMAADEIFRRHRFSNWQKKFQAEIADGVIDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 61 PQTFMNLSGQSIGEAMRFYKLTPA-DLVVIYDELDLIPGKLRIKTGGGSGGHNGIKSIDA 119
Query: 121 KC-----GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL-AK 174
G+NY+R+R+GIG P + +VLG+F+ + +L ++ IA ++ LL AK
Sbjct: 120 HMQAFPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLLGAIADNVGLLAAK 179
Query: 175 REDVSFLNHIV 185
ED SF+N I
Sbjct: 180 GEDNSFMNRIA 190
>gi|313904442|ref|ZP_07837819.1| peptidyl-tRNA hydrolase [Eubacterium cellulosolvens 6]
gi|313470778|gb|EFR66103.1| peptidyl-tRNA hydrolase [Eubacterium cellulosolvens 6]
Length = 189
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 101/187 (54%), Gaps = 1/187 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++AGLGNPG +Y +HN+GF I + P A +G + G + +LIK
Sbjct: 1 MFLIAGLGNPGRKYDRTKHNMGFDTITELVDRWNIPQGGTDMKAMYGKGLIGGQKVMLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +N+YK+ LVI+DD+ LD G LR++ G GHNG+K+I +
Sbjct: 61 PLTYMNLSGESIAAYVNYYKVDPESELLVIYDDISLDPGQLRIRKKGSAGGHNGMKNIIQ 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GIG P + +VL FS +R + I A + ++ E
Sbjct: 121 HLGTDKFARIRVGIGDKPAGWDLADYVLAPFSKADRELVDAGIGRAADAAEMIVAGEIDR 180
Query: 180 FLNHIVS 186
+N
Sbjct: 181 AMNTFNQ 187
>gi|302877723|ref|YP_003846287.1| peptidyl-tRNA hydrolase [Gallionella capsiferriformans ES-2]
gi|302580512|gb|ADL54523.1| peptidyl-tRNA hydrolase [Gallionella capsiferriformans ES-2]
Length = 192
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 74/188 (39%), Positives = 103/188 (54%), Gaps = 3/188 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN+GF +D + + KFH + G + G IL+KP
Sbjct: 6 LIVGLGNPGREYEATRHNVGFWWVDELAEEAELNFKSEAKFHGLSARGLVLGRELILLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ + FYK+ LV+HD+LDL G RLK GG GHNGLK I +
Sbjct: 66 QTFMNLSGRSVGALAQFYKIAPA-QILVVHDELDLQPGIARLKLGGSHGGHNGLKDIIAQ 124
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + + RLR+GIG P D A + VLG+ ER +L + LP + + +
Sbjct: 125 LGGREFWRLRLGIGHPGDRAQVSDFVLGHPREAERELMLEAQHQSMQVLPSVLDGKMEAA 184
Query: 181 LNHIVSVR 188
+ + S +
Sbjct: 185 MLKLHSRK 192
>gi|295397824|ref|ZP_06807888.1| aminoacyl-tRNA hydrolase [Aerococcus viridans ATCC 11563]
gi|294973921|gb|EFG49684.1| aminoacyl-tRNA hydrolase [Aerococcus viridans ATCC 11563]
Length = 221
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 3/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF+ +D H K F E E ++G + I +K
Sbjct: 35 MKLIVGLGNPGKKYEGTRHNIGFIVLDEWAHQHHETFNKTGFKGEYFETFVNGEKVIFLK 94
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ V N+Y +P +E+ LV++DDLD+D G +RL+ G GHNG+KS+
Sbjct: 95 PTTFMNNSGEAVGAVANYYSIP-VEDILVVYDDLDMDPGRIRLRQKGSAGGHNGVKSLIA 153
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G + +R+++GIG P ++ HVL F + +L ++
Sbjct: 154 HLGTDKIRRIKLGIGHPGKDGTVVNHVLSRFPKEDHTPMLAATRAAVEAIDYWLAGHSFE 213
Query: 179 SFLNHIVS 186
+ + +
Sbjct: 214 ETMTNYNN 221
>gi|294791582|ref|ZP_06756730.1| aminoacyl-tRNA hydrolase [Veillonella sp. 6_1_27]
gi|294456812|gb|EFG25174.1| aminoacyl-tRNA hydrolase [Veillonella sp. 6_1_27]
Length = 192
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + +HNIGFM ID I W+++ AE+ +DG + +L+K
Sbjct: 1 MKLVVGLGNPGKQYEKTKHNIGFMVIDAIADSVPHTPWREEQRAEVCSITVDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ +M +YK+ + + I+DD+DL G LR++ G GHNG+KS+
Sbjct: 61 PQTFMNLSGESVGPLMRYYKI-DPSDVYCIYDDMDLPIGKLRIRPNGSSGGHNGIKSLIS 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ R R+GIGRP +I HVL FS + + I + +++ +
Sbjct: 120 HIGTENFPRFRVGIGRPLPQWTVIDHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDK 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 GMNQFN 185
>gi|160878271|ref|YP_001557239.1| aminoacyl-tRNA hydrolase [Clostridium phytofermentans ISDg]
gi|189038285|sp|A9KR32|PTH_CLOPH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|160426937|gb|ABX40500.1| Aminoacyl-tRNA hydrolase [Clostridium phytofermentans ISDg]
Length = 191
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 67/183 (36%), Positives = 105/183 (57%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNP EY RHNIGF I R+ + KK A +G + G + IL K
Sbjct: 1 MYIIIGLGNPTREYEATRHNIGFDAITRLADDNNISLDTKKHKAICGKGMIGGEKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E+++FYK+ E +VI+DD+ LD G LR++T G GHNG+K+I
Sbjct: 61 PQTYMNLSGESVRELIDFYKVTK-EEIIVIYDDISLDVGQLRIRTKGSAGGHNGIKNIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R++IG+G P + +VL F E + ++ ++++ + +
Sbjct: 120 HLGSDEFCRIKIGVGDKPKNWDLADYVLARFPKEEEPAIREALEKVSKACETILRDGAKV 179
Query: 180 FLN 182
+N
Sbjct: 180 AMN 182
>gi|10802611|gb|AAG23529.1|AF244580_1 peptidyl-tRNA hydrolase [Carboxydothermus hydrogenoformans]
Length = 186
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 68/180 (37%), Positives = 101/180 (56%), Gaps = 3/180 (1%)
Query: 7 LGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMN 66
+GNPG EY RHN GFM +D + H K+KF + + EG++ G++ +L+KPQT+MN
Sbjct: 6 IGNPGQEYENTRHNAGFMVVDELAKKHGILITKRKFKSLVGEGEILGVKVLLLKPQTYMN 65
Query: 67 LSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-KN 125
LSG ++ E ++FYKLP L +V++DDLDL G + L+ G GH G+ SI G +
Sbjct: 66 LSGTAVQEAVSFYKLP-LSRLVVVYDDLDLPLGKICLRLKGSAGGHRGMGSIISCLGSEE 124
Query: 126 YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIV 185
RL+IGIGRP + +VL F+ ER L P + A ++ + +
Sbjct: 125 IPRLKIGIGRPAV-GDVKDYVLQPFTGAEREILEPTLKLAAEAITVALTEGFNKAMTDFN 183
>gi|239996493|ref|ZP_04717017.1| peptidyl-tRNA hydrolase [Alteromonas macleodii ATCC 27126]
Length = 193
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 5/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G ++++ + P + KF + + + G L+ P
Sbjct: 6 LIVGLGNPGPEYENTRHNAGEWFLNQLADTYNAPLKPETKFFGKTARITVAGKDIRLLYP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ++ + NFY++ E LV D+LDL G + K GG NG++ I K
Sbjct: 66 TTFMNKSGQAVAALANFYRIEP-EQILVAFDELDLPPGVAKYKVGGSS-SQNGVRDIVAK 123
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G KN+ RLRIGIG P + + HVLG + E+ + ID R +L K +
Sbjct: 124 MGNNKNFLRLRIGIGHPGHKSRVTGHVLGKPPAEEKAAIESAIDEAVRCTEILLKEDLKQ 183
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 184 AQNRLHSHK 192
>gi|260467096|ref|ZP_05813275.1| peptidyl-tRNA hydrolase [Mesorhizobium opportunistum WSM2075]
gi|259029108|gb|EEW30405.1| peptidyl-tRNA hydrolase [Mesorhizobium opportunistum WSM2075]
Length = 252
Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats.
Identities = 90/184 (48%), Positives = 123/184 (66%), Gaps = 1/184 (0%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ AGLGNPG +Y +NRHN+GFM D I H F W KKF I+EG L G + ILIKP
Sbjct: 7 LVFAGLGNPGAKYADNRHNVGFMAADAIARRHSFSPWSKKFQGLIAEGTLGGEKIILIKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSGQS+ E++ FYKL E V +D++DL G +R+K GGG GHNG++S+ +
Sbjct: 67 QTFMNLSGQSVGELLRFYKLGP-EALTVFYDEIDLAAGKVRVKVGGGSGGHNGIRSLDQH 125
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
GK+++R+RIG+G P + HVLG+F+ +R +L ++D IA LLAK +D SF+
Sbjct: 126 IGKDFRRVRIGVGHPGVKEMVHGHVLGDFAKADREWLDVLLDTIADDAGLLAKGDDNSFM 185
Query: 182 NHIV 185
N +
Sbjct: 186 NRVT 189
>gi|329941175|ref|ZP_08290454.1| aminoacyl-tRNA hydrolase [Streptomyces griseoaurantiacus M045]
gi|329299706|gb|EGG43605.1| aminoacyl-tRNA hydrolase [Streptomyces griseoaurantiacus M045]
Length = 199
Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats.
Identities = 78/191 (40%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLD-----GLR 55
++V GLGNPG EY NRHN+GFM D + + + A++ EG++ R
Sbjct: 10 WLVVGLGNPGPEYAMNRHNVGFMVADLLAGRTGGRFKRAARTQAQVVEGRMGPPGPGSRR 69
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L+KP ++MNLSG + + FYK+P L + + +HD+LD+D+G LRLK GGGD GHNGL
Sbjct: 70 VVLVKPMSYMNLSGGPVNALREFYKVP-LSHVVAVHDELDIDYGVLRLKRGGGDNGHNGL 128
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 129 KSMTKAMGAEYHRVRCGIGRPPGRMQVADFVLKDFSSAERKELDWFVDRAADAVECLVAE 188
Query: 176 EDVSFLNHIVS 186
N S
Sbjct: 189 GLERAQNTYNS 199
>gi|301300312|ref|ZP_07206519.1| aminoacyl-tRNA hydrolase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300852085|gb|EFK79762.1| aminoacyl-tRNA hydrolase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 185
Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 106/189 (56%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN+GFM ++R H K+KF + ISE ++G + I+IK
Sbjct: 1 MKMIVGLGNIGKKYEGTRHNVGFMVVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M+++ L E+ ++ HDD+DL+ G LRL+ G GHNG+KSI
Sbjct: 61 PTTYMNESGRAVRPLMDYFNLTT-EDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +KR+R+GI P ++ VL F+ + L + +L + +D
Sbjct: 120 HVGTEKFKRVRVGIDHP-QKMSVVDWVLSRFTKEQEAKLDDGLTRAVAALDDWIENDD-- 176
Query: 180 FLNHIVSVR 188
F+N +
Sbjct: 177 FMNTMNRFN 185
>gi|310829354|ref|YP_003961711.1| peptidyl-tRNA hydrolase [Eubacterium limosum KIST612]
gi|308741088|gb|ADO38748.1| peptidyl-tRNA hydrolase [Eubacterium limosum KIST612]
Length = 203
Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats.
Identities = 63/186 (33%), Positives = 101/186 (54%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG EY RHNIGF +D I K + +G + +L+K
Sbjct: 1 MYLIIGLGNPGREYALTRHNIGFEAVDYIAGQKNVQITKDEHEGLTGVYFENGEKVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG + E++++Y +P LEN LVI+DD+DLD G +R++ G HNG++SI
Sbjct: 61 PMTYMNNSGLCVEELVSYYDVP-LENTLVIYDDIDLDPGKIRIRKKGSAGTHNGMRSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ +N+ R+RIGIG+ P + +VL F+ E + + A ++ +
Sbjct: 120 QLQDQNFPRIRIGIGKKPPQWDLANYVLSKFTPDETEVMREAVKKTAEAVEFYINEDIDF 179
Query: 180 FLNHIV 185
+N +
Sbjct: 180 AMNRLN 185
>gi|291546532|emb|CBL19640.1| peptidyl-tRNA hydrolase [Ruminococcus sp. SR1/5]
Length = 192
Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats.
Identities = 64/189 (33%), Positives = 108/189 (57%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y RHN+GF +D + H P KF+A +G + G + IL+K
Sbjct: 1 MYLIAGLGNPGKQYEATRHNMGFDTVDCLVEKHNIPQGGVKFNAMYGKGIIGGEKAILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P ++MNLSG + E+ ++K+ +VI+DD+DL+ G LR++ G GHNG+K I
Sbjct: 61 PLSYMNLSGGPIQEMSGYFKIDPETELIVIYDDIDLEPGQLRIRKKGSAGGHNGIKDIIR 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + R+R+G+G P + VLG+FS +R + I++ A ++ ++ +
Sbjct: 121 RLGTEKFIRIRVGVGAKPKDWDLADFVLGHFSDSDRKLVDEGINDAAEAVEMILSEGVDA 180
Query: 180 FLNHIVSVR 188
+N +
Sbjct: 181 AMNKYNRKK 189
>gi|166031179|ref|ZP_02234008.1| hypothetical protein DORFOR_00865 [Dorea formicigenerans ATCC
27755]
gi|166029026|gb|EDR47783.1| hypothetical protein DORFOR_00865 [Dorea formicigenerans ATCC
27755]
Length = 203
Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNP EY RHN+GF ID+I + KK A + +G ++G + +L+K
Sbjct: 10 MIIIAGLGNPTKEYEGTRHNVGFQVIDKIAEKYNIAVDAKKGRAYVGKGIIEGQKVLLVK 69
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ E+++++K+ E LVI+DD+ L+ G +R++ G GHNG+K+I
Sbjct: 70 PQTYMNLSGESIRELVDYFKVDPKEELLVIYDDISLNPGQIRIRKKGSAGGHNGIKNIIA 129
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + ++R+++G+G P + +VLG+F + + + + + K E +
Sbjct: 130 QLGTDTFQRIKVGVGEKPKGYDLAAYVLGHFHGEDLELVEEGYEKAISATEEILKGEIDA 189
Query: 180 FLNHIVSVRK 189
+N K
Sbjct: 190 AMNEYNRKVK 199
>gi|225016416|ref|ZP_03705608.1| hypothetical protein CLOSTMETH_00319 [Clostridium methylpentosum
DSM 5476]
gi|224950801|gb|EEG32010.1| hypothetical protein CLOSTMETH_00319 [Clostridium methylpentosum
DSM 5476]
Length = 209
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 68/183 (37%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GF+ +D++ K KF + E + R +L+KP
Sbjct: 24 YLIVGLGNPGKEYEFTRHNAGFLALDQLAEKSGAAVKKIKFKSLTGEAVVGSRRCLLMKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG++++E MNFYK+P +EN LV++DD+ L+ G LR++ G D GHNG+KSI
Sbjct: 84 STYMNNSGEAVVEAMNFYKIP-IENVLVLYDDISLEPGKLRIRRKGSDGGHNGIKSIIYL 142
Query: 122 CGKN-YKRLRIGIGRPPD-TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
GK+ + R+++G+G+ PD + + VL FS E + N + L+ +
Sbjct: 143 TGKDTFPRIKLGVGKKPDPRYDLAKWVLSAFSKEEFEAMEQAFSNAGEAAALIVDGKIDQ 202
Query: 180 FLN 182
+N
Sbjct: 203 AMN 205
>gi|319761696|ref|YP_004125633.1| peptidyl-tRNA hydrolase [Alicycliphilus denitrificans BC]
gi|317116257|gb|ADU98745.1| peptidyl-tRNA hydrolase [Alicycliphilus denitrificans BC]
Length = 209
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 98/186 (52%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG EY RHN GF ID + A ++ +H + + G L++
Sbjct: 3 KLFVGLGNPGPEYEATRHNAGFWWIDALARELKVVLAPERSYHGLAARANVAGHGVWLLQ 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ + F+K+ E LV+HD+LDL G +LK GG AGHNGL+ I
Sbjct: 63 PQTFMNLSGKSVAALARFFKIAP-EEILVVHDELDLPPGQAKLKHGGSHAGHNGLRDIHA 121
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLR+GIG P A +I VL + +R + I + ++ P + +
Sbjct: 122 QLGTGDYWRLRLGIGHPGARAEVINWVLKKPAPDQRTLIEDSIAHSLKAYPAMLAGDMDK 181
Query: 180 FLNHIV 185
+
Sbjct: 182 ATQLVH 187
>gi|254447715|ref|ZP_05061180.1| peptidyl-tRNA hydrolase [gamma proteobacterium HTCC5015]
gi|198262495|gb|EDY86775.1| peptidyl-tRNA hydrolase [gamma proteobacterium HTCC5015]
Length = 197
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 102/185 (55%), Gaps = 2/185 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E RHN GF +D + + + KF E + + +G L+KP
Sbjct: 13 MLVGLGNPGDKYTETRHNAGFWFLDEVAARYGASFRPDSKFQGEAASIRFEGRDIRLLKP 72
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+S+ + FYK+P +E+ LV HD+LDLD G RLK GG GHNGL+
Sbjct: 73 TTFMNHSGRSISAMARFYKIP-VEHILVAHDELDLDPGVARLKRAGGHGGHNGLRDTIAA 131
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
GK++ RLRIGIG P ++ +VL N S ER + + ++ L L + +
Sbjct: 132 MGKDFWRLRIGIGHPGHRDDVVGYVLKNASKSERQQITNSLMDVDDVLDTLLSGQLEKAM 191
Query: 182 NHIVS 186
+ S
Sbjct: 192 MQLHS 196
>gi|284007362|emb|CBA72746.1| peptidyl-tRNA hydrolase [Arsenophonus nasoniae]
Length = 196
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G ++ + + + KF + L G L+
Sbjct: 5 KLIVGLANPGAEYALTRHNAGAWYVELLAKHYNQLLKEESKFFGYTARINLAGNDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+L + NFY++ E LV HD+LDL GT ++K GG + GHNGLK I
Sbjct: 65 PTTYMNLSGKSVLALANFYRIKPAE-ILVAHDELDLMPGTAKIKLGGSNGGHNGLKDIQN 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G + + RLRIGIG P D ++ VL + E+ + ID P+L
Sbjct: 124 KLGNDPNFYRLRIGIGHPGDKNKVVGFVLSKPTLAEQKLINDTIDEAIGCTPILLNEGVN 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 KAVNRLHAFK 193
>gi|308186578|ref|YP_003930709.1| Peptidyl-tRNA hydrolase [Pantoea vagans C9-1]
gi|308057088|gb|ADO09260.1| Peptidyl-tRNA hydrolase [Pantoea vagans C9-1]
Length = 195
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + H + KF+ + + G L+
Sbjct: 5 KLIVGLANPGAEYAATRHNAGAWYLDLLAERHNQSLKEESKFYGYTARLAIAGEDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVAAMATFYRITP-EEILVAHDELDLPPGVAKFKQGGGHGGHNGLKDIIS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + VLG + E+ + ID AR L K + +
Sbjct: 124 KLGNNNNFHRLRIGIGHPGDRNKVTGFVLGKPPASEQKLIDDAIDEAARCTELWLKEDRI 183
Query: 179 SFLNHIVSVR 188
+N + + R
Sbjct: 184 KAMNRLHAFR 193
>gi|15896464|ref|NP_349813.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum ATCC 824]
gi|21263854|sp|Q97E97|PTH_CLOAB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|15026289|gb|AAK81153.1|AE007817_7 Stage V sporulation protein C, peptidyl-tRNA hydrolase [Clostridium
acetobutylicum ATCC 824]
gi|325510622|gb|ADZ22258.1| peptidyl-tRNA hydrolase [Clostridium acetobutylicum EA 2018]
Length = 187
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHN+GF I+ I + H KK F +G +DG + IL+K
Sbjct: 1 MFLIVGLGNPGLKYEHTRHNMGFDAIENIAAKHNISIDKKGFKGLYGKGIIDGEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E N+YK+ EN +VI+DD+ LD G +R++T G GHNG+K+I
Sbjct: 61 PYTYMNLSGESVVEAANYYKINK-ENIVVIYDDISLDVGKIRIRTKGSAGGHNGIKNIVL 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+++G+G P T +++ +VLG FS ER + +++ + ++ + +
Sbjct: 120 HLSSEEFPRVKVGVGEP--TENLVNYVLGKFSQDERKKIEEVLNIVTEAVECMVVDGVQN 177
Query: 180 FLNHIVSVR 188
+N ++
Sbjct: 178 AMNKFNGLK 186
>gi|330823567|ref|YP_004386870.1| peptidyl-tRNA hydrolase [Alicycliphilus denitrificans K601]
gi|329308939|gb|AEB83354.1| Peptidyl-tRNA hydrolase [Alicycliphilus denitrificans K601]
Length = 209
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 98/186 (52%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG EY RHN GF ID + A ++ +H + + G L++
Sbjct: 3 KLFVGLGNPGPEYEATRHNAGFWWIDALARELKVVLAPERSYHGLAARANVAGHGVWLLQ 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ + F+K+ E LV+HD+LDL G +LK GG AGHNGL+ I
Sbjct: 63 PQTFMNLSGKSVAALARFFKIAP-EEILVVHDELDLPPGQAKLKRGGSHAGHNGLRDIHA 121
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLR+GIG P A +I VL + +R + I + ++ P + +
Sbjct: 122 QLGTGDYWRLRLGIGHPGARAEVINWVLKKPAPDQRTLIEDSIAHSLKAYPAMLAGDMDK 181
Query: 180 FLNHIV 185
+
Sbjct: 182 ATQLVH 187
>gi|319795631|ref|YP_004157271.1| peptidyL-tRNA hydrolase [Variovorax paradoxus EPS]
gi|315598094|gb|ADU39160.1| peptidyl-tRNA hydrolase [Variovorax paradoxus EPS]
Length = 224
Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 95/187 (50%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG EY RHN GF ID + ++ +H + + G L++
Sbjct: 17 KLFVGLGNPGPEYEATRHNAGFWWIDALARDWKLNLVPERGYHGLAARANIGGQSIWLLE 76
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ + F+K+ E LV+HD+LD+ G +LK GG AGHNGL+ I
Sbjct: 77 PQTFMNLSGKSVAALARFFKIAP-EEILVVHDELDVVPGQAKLKFGGSHAGHNGLRDIHA 135
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLR+GIG P + ++ VL +R + I + P L E
Sbjct: 136 QLGTGDYWRLRLGIGHPGVKSEVVNWVLKKPLKEQRELIDDTIVRTLHAAPALVAGEMEK 195
Query: 180 FLNHIVS 186
I +
Sbjct: 196 ATMLIHT 202
>gi|150388005|ref|YP_001318054.1| peptidyl-tRNA hydrolase [Alkaliphilus metalliredigens QYMF]
gi|167011987|sp|A6TJM7|PTH_ALKMQ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|149947867|gb|ABR46395.1| Aminoacyl-tRNA hydrolase [Alkaliphilus metalliredigens QYMF]
Length = 185
Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 106/186 (56%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNPG +Y RHN+GF ID + K K A E ++ G + IL K
Sbjct: 1 MYIIVGLGNPGKKYSGTRHNVGFDVIDLLAHRLGITVNKLKHKALYGEARIGGEKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E+M FYK+ + EN +VI+DD+D+ G+LR++ G HNG+KS
Sbjct: 61 PQTFMNLSGESIREMMQFYKI-DPENLIVIYDDIDVKVGSLRIRQSGSAGTHNGMKSTIY 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + + R+RIG+GRP + + +VLG+F+ E + ++ ++ +
Sbjct: 120 QLQTDAFPRIRIGVGRP-EFGDLSNYVLGSFTKDEIPLMKESLERATLTVESIVIDGIDK 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 AMNRYN 184
>gi|330993036|ref|ZP_08316974.1| Peptidyl-tRNA hydrolase [Gluconacetobacter sp. SXCC-1]
gi|329759806|gb|EGG76312.1| Peptidyl-tRNA hydrolase [Gluconacetobacter sp. SXCC-1]
Length = 190
Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 80/187 (42%), Positives = 117/187 (62%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP NRHN+GFM +DRI + H F W+++F E++EG + + +L++
Sbjct: 1 MLLWTGLGNPEPGMSRNRHNVGFMAVDRIAARHGFAPWRRRFRGEVAEGMVGRHKVLLLR 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ + FYKLP E+ HD+LDLD G +R+K GGG AGHNGL+S+
Sbjct: 61 PMTYMNLSGESVQQAAAFYKLP-AESITAFHDELDLDPGRIRVKRGGGAAGHNGLRSMDR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K Y R+R+GIG P + HVLG+FS + +L P++D +A LLA +
Sbjct: 120 MLGTKEYWRVRLGIGHPGSRERVTGHVLGDFSRADHEWLDPMLDTLADEATLLADGKPEL 179
Query: 180 FLNHIVS 186
F+ + +
Sbjct: 180 FMTRMAA 186
>gi|297545522|ref|YP_003677824.1| peptidyl-tRNA hydrolase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843297|gb|ADH61813.1| peptidyl-tRNA hydrolase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 189
Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 77/190 (40%), Positives = 112/190 (58%), Gaps = 4/190 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNPG EY + RHNIGFM ID + K KF + + E G + IL+K
Sbjct: 1 MFIIAGLGNPGIEYEQTRHNIGFMVIDELAKKLGINVTKLKFKSLMGEDYFKGEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG++L E +NFYK+P LEN ++I+DD DLD G +R++ G GHNG+ SI
Sbjct: 61 PQTFMNSSGEALYEAVNFYKIP-LENVIIIYDDKDLDVGKIRIRKKGSSGGHNGMNSIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+RIGIG+P ++ HVLG F E+ + + A ++ + +
Sbjct: 120 LLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEH 177
Query: 180 FLNHIVSVRK 189
++ ++K
Sbjct: 178 AMSKFNGLQK 187
>gi|282848944|ref|ZP_06258333.1| aminoacyl-tRNA hydrolase [Veillonella parvula ATCC 17745]
gi|294793436|ref|ZP_06758573.1| aminoacyl-tRNA hydrolase [Veillonella sp. 3_1_44]
gi|282581219|gb|EFB86613.1| aminoacyl-tRNA hydrolase [Veillonella parvula ATCC 17745]
gi|294455006|gb|EFG23378.1| aminoacyl-tRNA hydrolase [Veillonella sp. 3_1_44]
Length = 192
Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + +HNIGFM ID I W+++ AE+ +DG + +L+K
Sbjct: 1 MKLVVGLGNPGKQYEKTKHNIGFMVIDAIADSVPHTPWREEQRAEVCSITVDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ +M +YK+ + + I+DD+DL G LR++ G GHNG+KS+
Sbjct: 61 PQTFMNLSGESVGPLMRYYKI-DPSDVYCIYDDMDLPIGKLRIRPNGSSGGHNGIKSLIS 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ R R+GIGRP +I HVL FS + + I + +++ +
Sbjct: 120 HIGTENFPRFRVGIGRPLPQWTVIDHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDK 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 GMNQFN 185
>gi|103487103|ref|YP_616664.1| peptidyl-tRNA hydrolase [Sphingopyxis alaskensis RB2256]
gi|119391011|sp|Q1GSP1|PTH_SPHAL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|98977180|gb|ABF53331.1| peptidyl-tRNA hydrolase [Sphingopyxis alaskensis RB2256]
Length = 189
Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 76/185 (41%), Positives = 111/185 (60%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +RHN+GFM D I H FP KKF + +G++ R +L+K
Sbjct: 1 MQLWVGLGNPGPKYAMHRHNVGFMAADVIAEIHDFPPPVKKFQGWLQDGRIGSTRILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++FYKL + V +D+LDL +++K GGG AGHNG++S+ +
Sbjct: 61 PGTFMNESGRSVRAALDFYKLA-ATDVTVFYDELDLAPMKVKVKRGGGAAGHNGIRSMIQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++R+RIGIG P + HVLGN+ E L ++ IA LAK +DV F
Sbjct: 120 HIGDDFRRIRIGIGHPGHKDRVTGHVLGNYHKSEMEPLADLLGAIAAEAEWLAKGDDVRF 179
Query: 181 LNHIV 185
+ +
Sbjct: 180 QSDLA 184
>gi|329917507|ref|ZP_08276487.1| Peptidyl-tRNA hydrolase [Oxalobacteraceae bacterium IMCC9480]
gi|327544537|gb|EGF30045.1| Peptidyl-tRNA hydrolase [Oxalobacteraceae bacterium IMCC9480]
Length = 196
Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 7/192 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS--FHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D++ + + +F+A ++ ++ L++
Sbjct: 5 LIVGLGNPGPEYEQTRHNAGFWLVDKLANGIARCKLVRETRFNAFAAKAAIEQHEVWLLE 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SGQS+ + FYK+ ++ LV+HD+LDL G RLK GG GHNGLK I+
Sbjct: 65 PQTFMNRSGQSVGALARFYKIA-VDEVLVVHDELDLLPGAARLKKGGSSGGHNGLKDITA 123
Query: 121 KCG-KNYKRLRIGIGRP---PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G ++Y RLR+GIG P + +VL E+ L I +P+L +
Sbjct: 124 ALGSQDYWRLRLGIGHPRTQGSQQPVADYVLHRPRKEEQPLLDEAIAKSIDIIPMLCDGK 183
Query: 177 DVSFLNHIVSVR 188
+ + + +
Sbjct: 184 FDAATMRLHTAK 195
>gi|241764086|ref|ZP_04762124.1| Aminoacyl-tRNA hydrolase [Acidovorax delafieldii 2AN]
gi|241366617|gb|EER61098.1| Aminoacyl-tRNA hydrolase [Acidovorax delafieldii 2AN]
Length = 202
Score = 240 bits (614), Expect = 7e-62, Method: Composition-based stats.
Identities = 64/181 (35%), Positives = 96/181 (53%), Gaps = 3/181 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG +Y RHN GF ID + ++ +H ++ + G L++
Sbjct: 3 KLFVGLGNPGPDYEATRHNAGFWWIDALAHELKATLVPERSYHGLVARTSVHGQSVWLLQ 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ + F+K+ E LV HD+LD+ G ++LK GG AGHNGL+ I
Sbjct: 63 PQTFMNLSGKSVAALARFFKI-QPEEILVAHDELDIPPGQVKLKRGGSHAGHNGLRDIHA 121
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLRIGIG P A + VL S +R + I++ ++ + +
Sbjct: 122 QLGSPDYWRLRIGIGHPGVKAEVANWVLKKPSPDQRTLIEDSIEHSLKAHAAMLAGDMDK 181
Query: 180 F 180
Sbjct: 182 A 182
>gi|114328981|ref|YP_746138.1| peptidyl-tRNA hydrolase [Granulibacter bethesdensis CGDNIH1]
gi|119390946|sp|Q0BPN7|PTH_GRABC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|114317155|gb|ABI63215.1| peptidyl-tRNA hydrolase [Granulibacter bethesdensis CGDNIH1]
Length = 194
Score = 240 bits (614), Expect = 7e-62, Method: Composition-based stats.
Identities = 78/186 (41%), Positives = 109/186 (58%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ + GLGNP RHNIGFM +D I H F W+ +F +EG L G + IL+K
Sbjct: 4 LLLWTGLGNPEPGMALQRHNIGFMAVDAIAQRHGFTPWRNRFKGLTAEGTLAGRKIILLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ F+KLP E HD+LDL G +R+K GGG AGHNGL+S+
Sbjct: 64 PMTYMNASGESVQPATAFFKLPP-EAVSAFHDELDLAPGKVRVKRGGGAAGHNGLRSMDR 122
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G Y R+R+GIG P + HVLGNF+ ++ +L P+++ +A + PLLA+
Sbjct: 123 MLGTPEYWRVRLGIGHPGSKERVHGHVLGNFAKSDQEWLGPLLEAVADAAPLLAEGRAED 182
Query: 180 FLNHIV 185
F+ I
Sbjct: 183 FMTRIA 188
>gi|269837229|ref|YP_003319457.1| peptidyl-tRNA hydrolase [Sphaerobacter thermophilus DSM 20745]
gi|269786492|gb|ACZ38635.1| peptidyl-tRNA hydrolase [Sphaerobacter thermophilus DSM 20745]
Length = 214
Score = 240 bits (614), Expect = 7e-62, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG Y RHNIGFM +D + + +F +E+ E + + R +L KP
Sbjct: 7 WLIVGLGNPGQRYAATRHNIGFMVVDHLARKLEPGTLRNQFDSELIETRDEPGRIVLQKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG ++ + +Y++P E L+I+DDLDL FG +RL+ GG AGH GL+S+ E
Sbjct: 67 QTYMNLSGIAVAQAARWYRVPT-ERILIIYDDLDLPFGRIRLRPGGSSAGHKGLQSVIEH 125
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIGRP + + +VL F S E L +I A + + +
Sbjct: 126 LGTDRVPRLRVGIGRPAHGSSVS-YVLSRFRSEEERVLPEVIALAADAALSWYQDGIDAA 184
Query: 181 LNHIVSV 187
+N
Sbjct: 185 MNMYNRA 191
>gi|239817314|ref|YP_002946224.1| peptidyl-tRNA hydrolase [Variovorax paradoxus S110]
gi|259537455|sp|C5CYZ7|PTH_VARPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|239803891|gb|ACS20958.1| peptidyl-tRNA hydrolase [Variovorax paradoxus S110]
Length = 210
Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats.
Identities = 66/181 (36%), Positives = 93/181 (51%), Gaps = 3/181 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG EY RHN GF ID + ++ +H + + G L++
Sbjct: 3 KLFVGLGNPGPEYEATRHNAGFWWIDALARDWKLNLVPERSYHGLAARTNIGGQSVWLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ + F+K+ E LV+HD+LD+ G +LK GG AGHNGL+ I
Sbjct: 63 PQTFMNLSGKSVGALARFFKIAP-EEILVVHDELDVVPGQAKLKFGGSHAGHNGLRDIHA 121
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLR+GIG P + +I VL +R + I + P L E
Sbjct: 122 QLGTGDYWRLRLGIGHPGVKSEVINWVLKKPLKEQREAIEDAIVRTLHAAPALVAGEMEK 181
Query: 180 F 180
Sbjct: 182 A 182
>gi|72160821|ref|YP_288478.1| peptidyl-tRNA hydrolase [Thermobifida fusca YX]
gi|119391031|sp|Q47SW2|PTH_THEFY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71914553|gb|AAZ54455.1| peptidyl-tRNA hydrolase [Thermobifida fusca YX]
Length = 213
Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats.
Identities = 70/180 (38%), Positives = 106/180 (58%), Gaps = 2/180 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG +Y NRHN+GFM +D + + K HA++ E ++ +L KP
Sbjct: 35 WLVVGLGNPGPKYAGNRHNVGFMVVDELAAQRGERWRLHKAHAQVVETRVGDAPVVLAKP 94
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
++MNLSG + ++ FYK+P ++ +V+HD+LD+ F L+LK GGG AGHNGL+SI+
Sbjct: 95 ASYMNLSGGPVAKLSAFYKVP-VDRIIVVHDELDIPFARLKLKRGGGSAGHNGLRSITAS 153
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+GIGRPP VL +FS+ ER L + A ++ +
Sbjct: 154 LGSPDYVRVRVGIGRPPGRMDAASFVLQDFSTAERKELDVHVARAADAVETVVTSGLEKA 213
>gi|313893361|ref|ZP_07826935.1| aminoacyl-tRNA hydrolase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442130|gb|EFR60548.1| aminoacyl-tRNA hydrolase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 192
Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 105/186 (56%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + +HNIGFM +D I W+++ AE+ + G + +L+K
Sbjct: 1 MKLVVGLGNPGKQYEKTKHNIGFMVVDAIADSVPHTPWREEQRAEVCSITVAGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN+SG+S+ +M +YK+ + + I+DD+DL G LR++ G GHNG+KS+
Sbjct: 61 PQTFMNVSGESVGPLMRYYKI-DPSDVYCIYDDMDLPVGKLRIRPNGSSGGHNGIKSLIS 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ R R+GIGRP +I HVL FS + + I + +++ +
Sbjct: 120 HLGTENFPRFRVGIGRPLPQWTVIDHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDK 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 GMNQFN 185
>gi|255541798|ref|XP_002511963.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
gi|223549143|gb|EEF50632.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
Length = 272
Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats.
Identities = 70/193 (36%), Positives = 106/193 (54%), Gaps = 6/193 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D + P F A + +G + + +L KP
Sbjct: 79 WLIVGLGNPGKKYQSTRHNVGFEMVDAVADSEGIPLSSVSFKALLGKGYIGNVPVMLAKP 138
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+S+ ++++YK+P L+ L+I+DDLDL F LRL GG GHNG++S+ +
Sbjct: 139 QTFMNASGESVGAIVSYYKIP-LKQVLLIYDDLDLPFAKLRLLPKGGHGGHNGMRSVIDH 197
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED-- 177
+++ RLRIGIGRPP VL FS E L ++ +L
Sbjct: 198 FKGSRDFPRLRIGIGRPPGKMDSANFVLRPFSRQEHEELDFTFQQGLEAIRILLLEGFNK 257
Query: 178 -VSFLNHIVSVRK 189
+F+N S+ +
Sbjct: 258 SATFVNSAKSMEQ 270
>gi|167901241|ref|ZP_02488446.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei NCTC 13177]
Length = 201
Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLFGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQ+++ + +F+K+ E LV HD+LDL G +LK GGG +GHNGLK IS
Sbjct: 63 PQTYMNRSGQAVVALAHFFKILPTE-ILVAHDELDLPPGAAKLKLGGGSSGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRKDEQDLIDAAIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P K E + +
Sbjct: 182 PTAIKGETERAMMQLH 197
>gi|29830107|ref|NP_824741.1| peptidyl-tRNA hydrolase [Streptomyces avermitilis MA-4680]
gi|46576777|sp|Q82HE5|PTH_STRAW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|29607217|dbj|BAC71276.1| putative peptidyl-tRNA hydrolase [Streptomyces avermitilis MA-4680]
Length = 203
Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats.
Identities = 77/191 (40%), Positives = 109/191 (57%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLD-----GLR 55
+++ GLGNPG EY NRHN+GFM D + + K A++ EG++ R
Sbjct: 14 WLIVGLGNPGPEYARNRHNVGFMVADLLAERIGGKFKRAGKAQAQVIEGRIGPPGPANRR 73
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
IL KP ++MNLSG + + FYK+P + N + +HD+LD+D+G LRLK GGGD GHNGL
Sbjct: 74 VILAKPMSYMNLSGGPVNALREFYKVP-VANIVAVHDELDIDYGVLRLKLGGGDNGHNGL 132
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G +Y R+R GIGRPP + VL +F+S ER L ++D A + L
Sbjct: 133 KSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFASAERKELDYLVDRAADAAECLVIE 192
Query: 176 EDVSFLNHIVS 186
S
Sbjct: 193 GLERAQGTYNS 203
>gi|323701606|ref|ZP_08113278.1| peptidyl-tRNA hydrolase [Desulfotomaculum nigrificans DSM 574]
gi|323533379|gb|EGB23246.1| peptidyl-tRNA hydrolase [Desulfotomaculum nigrificans DSM 574]
Length = 200
Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats.
Identities = 73/188 (38%), Positives = 103/188 (54%), Gaps = 4/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY + RHNIGFM ID + K + A + L + IL K
Sbjct: 1 MKLIVGLGNPGPEYAKTRHNIGFMVIDALARDLGIVVEKNQHKALTGQAYLGREKLILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQ+++ +MN+YKL + + LVI+DD+DL G LR++ G G G+KSI E
Sbjct: 61 PQTYMNLSGQAVVALMNWYKLQPV-DLLVIYDDMDLPPGRLRIRQSGSAGGQKGMKSIIE 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++GIGRP A I HVLG E + P I + + +
Sbjct: 120 LLGTQEFTRMKVGIGRPEHGA--IDHVLGKIDDQEAALINPAIMAAVEAAKVWVLDGAPA 177
Query: 180 FLNHIVSV 187
+N V
Sbjct: 178 AMNKFNRV 185
>gi|326778824|ref|ZP_08238089.1| peptidyl-tRNA hydrolase [Streptomyces cf. griseus XylebKG-1]
gi|326659157|gb|EGE44003.1| peptidyl-tRNA hydrolase [Streptomyces cf. griseus XylebKG-1]
Length = 197
Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats.
Identities = 75/191 (39%), Positives = 115/191 (60%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLD-----GLR 55
+++ GLGNPG +Y NRHN+GFM D + + + +K A++ EG++ R
Sbjct: 8 WLIVGLGNPGPDYAANRHNVGFMVADLLATRIGGKFKRAQKAQAQVVEGRMGPPGPGSRR 67
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L+KP ++MNLSG + + +FYK+P ++ + +HD+LD+D+G LRLK GGGD GHNGL
Sbjct: 68 VVLVKPMSYMNLSGGPVTALRDFYKVPT-DHVVAVHDELDVDYGMLRLKLGGGDNGHNGL 126
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G +Y R+R GIGRPP + VL +FSS ER L ++D A ++ L
Sbjct: 127 KSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECLLAE 186
Query: 176 EDVSFLNHIVS 186
+ S
Sbjct: 187 GLERAQSAYNS 197
>gi|238917834|ref|YP_002931351.1| hypothetical protein EUBELI_01915 [Eubacterium eligens ATCC 27750]
gi|259535178|sp|C4Z4L5|PTH_EUBE2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238873194|gb|ACR72904.1| Hypothetical protein EUBELI_01915 [Eubacterium eligens ATCC 27750]
Length = 186
Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 101/186 (54%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG EY RHN GF ID + + K I +G + G + IL+K
Sbjct: 1 MYIIAGLGNPGKEYMGTRHNAGFSVIDELADKYNISVDTAKHKGLIGKGVIAGQKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+ + EVM++YK +++++LVI DD+ LD G LRL+ G GHNG+KSI
Sbjct: 61 PMTYMNNSGECIREVMDYYKC-DIDDFLVIFDDISLDVGKLRLRAKGSAGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + +KR++ G+G P + VLG F + E L ++ + S
Sbjct: 120 HLGSDKFKRIKFGVGDKPKNWDLADWVLGKFPAEEYATLREANKKACEAVECILTDGIES 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 GMNKYN 185
>gi|109898885|ref|YP_662140.1| peptidyl-tRNA hydrolase [Pseudoalteromonas atlantica T6c]
gi|119390980|sp|Q15SQ2|PTH_PSEA6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|109701166|gb|ABG41086.1| peptidyl-tRNA hydrolase [Pseudoalteromonas atlantica T6c]
Length = 194
Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats.
Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 5/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G ++ + H + + KF + G L+ P
Sbjct: 6 LIVGLGNPGLEYKYTRHNAGTWLVENLARMHNCTLSLQSKFFGYTGRVTIGGQDIRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++P E+ LV +D+LDL G + K GG NG++ I
Sbjct: 66 TTYMNKSGQAVAALAGFYRIPP-ESILVAYDELDLPPGIAKFKLGGSS-SQNGIRDIVSS 123
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLR+GIG P + +VLG + E+ + ID R + +L K +
Sbjct: 124 LGNNKDFYRLRVGIGHPGHKGKVSGYVLGKAPAKEQEQMDAAIDEGVRCIEILIKDDMKK 183
Query: 180 FLNHIVSVR 188
+N + S +
Sbjct: 184 AMNRLHSFK 192
>gi|17228339|ref|NP_484887.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7120]
gi|21263848|sp|Q8YYK4|PTH_ANASP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|17130189|dbj|BAB72801.1| peptidyl-tRNA hydrolase [Nostoc sp. PCC 7120]
Length = 203
Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats.
Identities = 71/192 (36%), Positives = 106/192 (55%), Gaps = 9/192 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQL-DGLRTILIK 60
++ GLGNP +Y + RHNIGF +D + + +KF + EG G++ L+K
Sbjct: 5 LIVGLGNPEPKYDQTRHNIGFAAVDALARAWNISLAENRKFQGQYGEGTAPGGVKIRLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ V ++YKL + E+ LVI+DDLDL G RL+ G GHNG+KS
Sbjct: 65 PLTYMNRSGQAIQAVTSWYKL-SGESVLVIYDDLDLPLGKTRLRLSGSAGGHNGMKSAIA 123
Query: 121 KCG-KNYKRLRIGIGRP-----PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+N+ RLRIGIG+P D + + HVLG FS+ E + ++ + + L K
Sbjct: 124 HLSTQNFPRLRIGIGKPKNAVNGDNSETVSHVLGKFSATETQLMSLVLQFVVECVELSLK 183
Query: 175 REDVSFLNHIVS 186
+ +N S
Sbjct: 184 QGVEKAMNRCNS 195
>gi|257868297|ref|ZP_05647950.1| peptidyl-tRNA hydrolase [Enterococcus casseliflavus EC30]
gi|257874430|ref|ZP_05654083.1| peptidyl-tRNA hydrolase [Enterococcus casseliflavus EC10]
gi|257802411|gb|EEV31283.1| peptidyl-tRNA hydrolase [Enterococcus casseliflavus EC30]
gi|257808594|gb|EEV37416.1| peptidyl-tRNA hydrolase [Enterococcus casseliflavus EC10]
Length = 186
Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN+GFM +D + + K F AE++E L+G + +L+K
Sbjct: 1 MKMIVGLGNPGKKYEKTKHNVGFMVVDALAQKYQATFKKSAFEAEVAEFFLNGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M ++ + E +V++DDLDL G +RL+ G GHNG+KS+
Sbjct: 61 PQTFMNESGRAVGPLMTYFGIYQ-EELVVVYDDLDLALGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ R++IGI RP ++ HVL F+ + +L ID + D
Sbjct: 120 HLDSTVFDRIKIGIDRPRPGQTVVNHVLSPFAKDDLPIVLQSIDKAVEASSDYLTNGDFL 179
Query: 180 F-LNHIV 185
+N
Sbjct: 180 ATMNRFN 186
>gi|261855770|ref|YP_003263053.1| peptidyl-tRNA hydrolase [Halothiobacillus neapolitanus c2]
gi|261836239|gb|ACX96006.1| peptidyl-tRNA hydrolase [Halothiobacillus neapolitanus c2]
Length = 194
Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 75/187 (40%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GF ID + + KFH E+ + + LIKP
Sbjct: 5 LIVGLGNPGSKYESTRHNAGFWFIDELARHWGGHLSSDTKFHCEMLRIFVKQVDRRLIKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ V NFYK+P E+ LV+HD+LDL G ++LK GG GHNGLK I +
Sbjct: 65 QTFMNLSGKSVAAVANFYKIP-AESILVVHDELDLLPGKMKLKIGGSHGGHNGLKDIQAQ 123
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G N+ RLRIGIG P ++ VL N + ER + I + + L +
Sbjct: 124 LGTPNFWRLRIGIGHPGHRDQVVGFVLTNPPASERTLIDASIRHAVNEIDALLDIDPEKS 183
Query: 181 LNHIVSV 187
I +
Sbjct: 184 TQRINAF 190
>gi|260584472|ref|ZP_05852219.1| aminoacyl-tRNA hydrolase [Granulicatella elegans ATCC 700633]
gi|260157990|gb|EEW93059.1| aminoacyl-tRNA hydrolase [Granulicatella elegans ATCC 700633]
Length = 186
Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF+ +D + F A ++ +DG + IL+K
Sbjct: 1 MKLIIGLGNPGAKYKGTRHNIGFITVDEFAYQEKLEFNQALFDATFTQTHIDGEKVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSGQ++ +MN++K+ +E+ +V++DD+DL G +RL+ G GHNG+KSI
Sbjct: 61 PLTYMNLSGQAVRPLMNYFKI-GIEDIVVLYDDMDLPVGKIRLRQKGSAGGHNGIKSIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G + + R++IG+GRP ++ HVL NF E+ +L + +L K + +
Sbjct: 120 CLGSDQFNRIKIGVGRPAPGRSVVNHVLANFEKEEQEEILSSVSKSVEALRDWIKGDNFI 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 QTMNRYN 186
>gi|310657788|ref|YP_003935509.1| peptidyl-tRNA hydrolase [Clostridium sticklandii DSM 519]
gi|308824566|emb|CBH20604.1| peptidyl-tRNA hydrolase [Clostridium sticklandii]
Length = 186
Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG +Y + RHN+GF+ +D + K KF + I EG + + +LIK
Sbjct: 1 MYLIVGLGNPGSKYEKTRHNVGFVTVDVLAGQLGIKVNKLKFKSLIGEGNIGSEKVVLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++++ +NFYK P+ + VI+DD+DLD G LR++ G HNG+++I
Sbjct: 61 PQTYMNLSGEAVMQAINFYK-PDHDKIFVIYDDIDLDVGRLRIRKKGSGGTHNGMRNIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ R RIG+ +P + + V F+ E L IDN A ++ L K +
Sbjct: 120 LTGFDDFPRFRIGVSKPKNGQDLASFVTSGFNKDEIKPLCEAIDNAADAIVLAIKEDIDK 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNKYN 185
>gi|227891597|ref|ZP_04009402.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius ATCC 11741]
gi|227866744|gb|EEJ74165.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius ATCC 11741]
Length = 200
Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 106/189 (56%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN+GFM ++R H K+KF + ISE ++G + I+IK
Sbjct: 16 MKMIVGLGNIGKKYEGTRHNVGFMVVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIK 75
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M+++ L E+ ++ HDD+DL+ G LRL+ G GHNG+KSI
Sbjct: 76 PTTYMNESGRAVRPLMDYFNLTT-EDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIIS 134
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +KR+R+GI P ++ VL F+ + L + +L + +D
Sbjct: 135 HVGTEKFKRVRVGIDHP-QKMSVVDWVLSRFTKEQEAKLDDGLTRAVAALDDWIENDD-- 191
Query: 180 FLNHIVSVR 188
F+N +
Sbjct: 192 FMNTMNRFN 200
>gi|18311467|ref|NP_563401.1| peptidyl-tRNA hydrolase [Clostridium perfringens str. 13]
gi|110798942|ref|YP_697173.1| peptidyl-tRNA hydrolase [Clostridium perfringens ATCC 13124]
gi|168205745|ref|ZP_02631750.1| peptidyl-tRNA hydrolase [Clostridium perfringens E str. JGS1987]
gi|168209723|ref|ZP_02635348.1| peptidyl-tRNA hydrolase [Clostridium perfringens B str. ATCC 3626]
gi|168213409|ref|ZP_02639034.1| peptidyl-tRNA hydrolase [Clostridium perfringens CPE str. F4969]
gi|168217602|ref|ZP_02643227.1| peptidyl-tRNA hydrolase [Clostridium perfringens NCTC 8239]
gi|169343257|ref|ZP_02864268.1| peptidyl-tRNA hydrolase [Clostridium perfringens C str. JGS1495]
gi|182624327|ref|ZP_02952112.1| peptidyl-tRNA hydrolase [Clostridium perfringens D str. JGS1721]
gi|21263844|sp|Q8XHJ8|PTH_CLOPE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390927|sp|Q0TMG7|PTH_CLOP1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|18146151|dbj|BAB82191.1| stage V sporulation protein C [Clostridium perfringens str. 13]
gi|110673589|gb|ABG82576.1| peptidyl-tRNA hydrolase [Clostridium perfringens ATCC 13124]
gi|169298555|gb|EDS80636.1| peptidyl-tRNA hydrolase [Clostridium perfringens C str. JGS1495]
gi|170662744|gb|EDT15427.1| peptidyl-tRNA hydrolase [Clostridium perfringens E str. JGS1987]
gi|170712152|gb|EDT24334.1| peptidyl-tRNA hydrolase [Clostridium perfringens B str. ATCC 3626]
gi|170715077|gb|EDT27259.1| peptidyl-tRNA hydrolase [Clostridium perfringens CPE str. F4969]
gi|177910545|gb|EDT72918.1| peptidyl-tRNA hydrolase [Clostridium perfringens D str. JGS1721]
gi|182380300|gb|EDT77779.1| peptidyl-tRNA hydrolase [Clostridium perfringens NCTC 8239]
Length = 188
Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 70/189 (37%), Positives = 116/189 (61%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHNIGF ID + + + ++KF EG ++ + IL+K
Sbjct: 1 MILIVGLGNPGKQYEQTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ E+ NFYKL + E +V++DD+ LD G LR++ G GHNG+KSI +
Sbjct: 61 PLTYMNLSGESIRELANFYKLEDDE-IIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G+P +++ HVLG FS +R + +I ++ ++ + K +
Sbjct: 120 NLGGDKFPRVKVGVGQP--KDNLVNHVLGKFSKEDREHIEKVIPVVSDAIVEIVKNDAKE 177
Query: 180 FLNHIVSVR 188
+N V
Sbjct: 178 SMNKFNGVN 186
>gi|303229597|ref|ZP_07316385.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-134-V-Col7a]
gi|303231900|ref|ZP_07318609.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-049-V-Sch6]
gi|302513429|gb|EFL55462.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-049-V-Sch6]
gi|302515722|gb|EFL57676.1| aminoacyl-tRNA hydrolase [Veillonella atypica ACS-134-V-Col7a]
Length = 192
Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y +HNIGFM ID I W+++ AE+ + G + +L+K
Sbjct: 1 MKLVVGLGNPGKQYEATKHNIGFMVIDAIADSVSHTPWREEQKAEVCSINVAGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +M +YK+ + + I+DD+DL G LR++ G GHNG+KS+
Sbjct: 61 PQTFMNASGESVGPLMRYYKI-DPSDVYCIYDDMDLPVGKLRIRPNGSSGGHNGIKSLIS 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ R R+GIGRP +I HVL FS + + I + +++ +
Sbjct: 120 HIGTENFPRFRVGIGRPLPQWTVIDHVLAPFSEENQEKVQKGIKDTVKAVLGTLEVGIDK 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 GMNQFN 185
>gi|297157757|gb|ADI07469.1| peptidyl-tRNA hydrolase [Streptomyces bingchenggensis BCW-1]
Length = 196
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 77/190 (40%), Positives = 108/190 (56%), Gaps = 6/190 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD-----GLRT 56
++V GLGNPG EY NRHN+GFM D + K A++ EG++ R
Sbjct: 8 WLVVGLGNPGPEYAANRHNVGFMVADLLADRMRGRFKAHKSRAQVVEGRVGAPGPASRRV 67
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
I+ KP +FMNLSG + +FYK+P + + + +HD+LD+D+G LRLK GGGD GHNGLK
Sbjct: 68 IVAKPMSFMNLSGGPTTALRDFYKVP-VGHVIAVHDELDIDYGALRLKLGGGDNGHNGLK 126
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
SI++ +Y R+R GIGRPP + VL +FS+ ER L +D A ++ L
Sbjct: 127 SITKSLSPDYFRVRFGIGRPPGRMDVAAFVLKDFSAAERKELDYFVDRAADAVETLIVDG 186
Query: 177 DVSFLNHIVS 186
+ S
Sbjct: 187 LERAQSTYNS 196
>gi|222149338|ref|YP_002550295.1| peptidyl-tRNA hydrolase [Agrobacterium vitis S4]
gi|254783846|sp|B9JZ39|PTH_AGRVS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|221736322|gb|ACM37285.1| peptidyl-tRNA hydrolase [Agrobacterium vitis S4]
Length = 234
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 92/185 (49%), Positives = 125/185 (67%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y NRHNIGFM +D IH H F W KKF AEI++G L G + +LIK
Sbjct: 1 MIVLAGLGNPGSQYAGNRHNIGFMALDAIHRRHSFSPWSKKFKAEIADGTLAGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E + FYKL E + I+D+LDL G R+K GGG GHNG+KS+
Sbjct: 61 PQTFMNLSGESVGEALRFYKLGP-EQLVAIYDELDLLPGKARIKLGGGHGGHNGIKSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
CG NY+RLR+GIG P D + + HVLG+F + +L P+++ +A + +L + ED
Sbjct: 120 HCGLNYRRLRLGIGHPGDKSRVQAHVLGDFGKLDAEWLDPLLETLAENADMLVRGEDSQL 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNKLA 184
>gi|282898618|ref|ZP_06306606.1| Peptidyl-tRNA hydrolase [Cylindrospermopsis raciborskii CS-505]
gi|281196486|gb|EFA71395.1| Peptidyl-tRNA hydrolase [Cylindrospermopsis raciborskii CS-505]
Length = 210
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 74/192 (38%), Positives = 105/192 (54%), Gaps = 9/192 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEG-QLDGLRTILIK 60
++ GLGNP +Y + RHNIGF ID I + +KF + EG L + ++K
Sbjct: 15 LIVGLGNPEPKYDQTRHNIGFAAIDAISRNWHIAVTENRKFQGQFGEGLALGSKKIRILK 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ V ++YKLP E+ LVI+DD+DL G +RL+ G GHNG+KS
Sbjct: 75 PLTYMNRSGESIQAVTSWYKLPP-ESVLVIYDDMDLPLGKIRLRLSGSAGGHNGMKSTIS 133
Query: 121 KCG-KNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+N+ RLRIGIG+P D + HVLG FS E + PI+ + + L K
Sbjct: 134 HLNSQNFPRLRIGIGKPKNLPNNDDGDTVSHVLGKFSPQEAKLIDPILAFVVECVELTLK 193
Query: 175 REDVSFLNHIVS 186
+ +N S
Sbjct: 194 QGVEKAMNRCNS 205
>gi|297193931|ref|ZP_06911329.1| peptidyl-tRNA hydrolase [Streptomyces pristinaespiralis ATCC 25486]
gi|197720294|gb|EDY64202.1| peptidyl-tRNA hydrolase [Streptomyces pristinaespiralis ATCC 25486]
Length = 197
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 78/191 (40%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLD-----GLR 55
+++ GLGNPG Y NRHN+GFM D + + K A+ EG++ R
Sbjct: 8 WLIVGLGNPGPGYAANRHNVGFMVADLLAERIGGSFKRAGKAQAQALEGRIGAPGPSNRR 67
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
IL KP ++MNLSG + + +FYK+P N + +HD+LD+D+GTLRLK GGGD GHNGL
Sbjct: 68 VILAKPMSYMNLSGGPVTALRDFYKVPT-SNIVAVHDELDIDYGTLRLKLGGGDNGHNGL 126
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G +Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 127 KSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSAERKELDYFVDRAADAVECLVID 186
Query: 176 EDVSFLNHIVS 186
S
Sbjct: 187 GLERAQGTYNS 197
>gi|255657459|ref|ZP_05402868.1| peptidyl-tRNA hydrolase [Clostridium difficile QCD-23m63]
gi|296449054|ref|ZP_06890844.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP08]
gi|296879877|ref|ZP_06903850.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP07]
gi|296262147|gb|EFH08952.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP08]
gi|296429166|gb|EFH15040.1| aminoacyl-tRNA hydrolase [Clostridium difficile NAP07]
Length = 186
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 62/186 (33%), Positives = 109/186 (58%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M++V GLGNPG +Y + RHN+GF ID + + K K A I EG++ + +L+K
Sbjct: 1 MYVVVGLGNPGKKYEKTRHNVGFDVIDILAKEYNISVTKIKHKALIGEGRVGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG++L+++ +YK+ +L N +V++DD+DL+ G +R++ G HNG+KSI++
Sbjct: 61 PQTYMNLSGETLIDIYKYYKV-DLSNIVVVYDDIDLEVGKIRIRKKGSGGTHNGMKSITK 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ R+R+G+ +P + VL F E + ++ A ++ + +
Sbjct: 120 CLGSNDFPRVRVGVSKPEVGQDLADFVLSRFRKEESDNINEALEKAAYAIDSIIRENIDM 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 SMNKYN 185
>gi|291617188|ref|YP_003519930.1| Pth [Pantoea ananatis LMG 20103]
gi|291152218|gb|ADD76802.1| Pth [Pantoea ananatis LMG 20103]
gi|327393643|dbj|BAK11065.1| peptidyl-tRNA hydrolase Pth [Pantoea ananatis AJ13355]
Length = 204
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + H ++ KF+ + L G L+
Sbjct: 14 KLIVGLANPGAEYAATRHNAGAWYLDLLAERHNQSLKEEAKFYGYTARLALAGEDVRLLV 73
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK I
Sbjct: 74 PTTFMNLSGKAVAAMATFYRIAP-EEILVAHDELDLPPGIAKFKQGGGHGGHNGLKDIIS 132
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + VLG + E+ + ID AR L K + +
Sbjct: 133 KLGNNNNFHRLRIGIGHPGDRNKVTGFVLGKPPASEQKLIDDAIDEAARCTELWLKEDRI 192
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 193 KAMNRLHAFK 202
>gi|182438174|ref|YP_001825893.1| peptidyl-tRNA hydrolase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178466690|dbj|BAG21210.1| putative peptidyl-tRNA hydrolase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 204
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 75/191 (39%), Positives = 115/191 (60%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLD-----GLR 55
+++ GLGNPG +Y NRHN+GFM D + + + +K A++ EG++ R
Sbjct: 15 WLIVGLGNPGPDYAANRHNVGFMVADLLATRIGGKFKRAQKAQAQVVEGRMGPPGPGSRR 74
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L+KP ++MNLSG + + +FYK+P ++ + +HD+LD+D+G LRLK GGGD GHNGL
Sbjct: 75 VVLVKPMSYMNLSGGPVTALRDFYKVPT-DHVVAVHDELDVDYGMLRLKLGGGDNGHNGL 133
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G +Y R+R GIGRPP + VL +FSS ER L ++D A ++ L
Sbjct: 134 KSMTKAMGPDYHRVRFGIGRPPGRMQVADFVLKDFSSTERKELAFLVDRSADAVECLLAE 193
Query: 176 EDVSFLNHIVS 186
+ S
Sbjct: 194 GLERAQSAYNS 204
>gi|53724086|ref|YP_104606.1| peptidyl-tRNA hydrolase [Burkholderia mallei ATCC 23344]
gi|67643440|ref|ZP_00442186.1| aminoacyl-tRNA hydrolase [Burkholderia mallei GB8 horse 4]
gi|121601224|ref|YP_991441.1| peptidyl-tRNA hydrolase [Burkholderia mallei SAVP1]
gi|167001047|ref|ZP_02266848.1| aminoacyl-tRNA hydrolase [Burkholderia mallei PRL-20]
gi|254174688|ref|ZP_04881349.1| peptidyl-tRNA hydrolase [Burkholderia mallei ATCC 10399]
gi|254201693|ref|ZP_04908057.1| peptidyl-tRNA hydrolase [Burkholderia mallei FMH]
gi|254207027|ref|ZP_04913378.1| peptidyl-tRNA hydrolase [Burkholderia mallei JHU]
gi|68052910|sp|Q62FC1|PTH_BURMA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199315|sp|A1UZN8|PTH_BURMS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|52427509|gb|AAU48102.1| peptidyl-tRNA hydrolase [Burkholderia mallei ATCC 23344]
gi|121230034|gb|ABM52552.1| peptidyl-tRNA hydrolase [Burkholderia mallei SAVP1]
gi|147747587|gb|EDK54663.1| peptidyl-tRNA hydrolase [Burkholderia mallei FMH]
gi|147752569|gb|EDK59635.1| peptidyl-tRNA hydrolase [Burkholderia mallei JHU]
gi|160695733|gb|EDP85703.1| peptidyl-tRNA hydrolase [Burkholderia mallei ATCC 10399]
gi|238524792|gb|EEP88223.1| aminoacyl-tRNA hydrolase [Burkholderia mallei GB8 horse 4]
gi|243063118|gb|EES45304.1| aminoacyl-tRNA hydrolase [Burkholderia mallei PRL-20]
Length = 201
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 66/196 (33%), Positives = 97/196 (49%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLFGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQ+++ + +F+K+ E LV HD+LDL G +LK G G GHNGLK IS
Sbjct: 63 PQTYMNRSGQAVVALAHFFKILPTE-ILVAHDELDLPPGAAKLKLGSGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRKDEQDLIDAAIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P K E + +
Sbjct: 182 PTAIKGETERAMMQLH 197
>gi|37520107|ref|NP_923484.1| peptidyl-tRNA hydrolase [Gloeobacter violaceus PCC 7421]
gi|46576719|sp|Q7NN75|PTH_GLOVI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|35211099|dbj|BAC88479.1| peptidyl-tRNA hydrolase [Gloeobacter violaceus PCC 7421]
Length = 198
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 68/182 (37%), Positives = 105/182 (57%), Gaps = 3/182 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG +Y + RHN GF+ +D + K +F ++EG G R IL+KP
Sbjct: 5 LFVGLGNPGLQYTQTRHNAGFLAVDALAKRWQCSWVEKSRFKGYLAEGAGPGGRAILLKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ V ++++LP + LV++D++ L G +RL+ G AGHNG+KS+ E
Sbjct: 65 TTYMNHSGQSVRAVADYFRLPP-QQLLVLYDEVALPLGKIRLRPEGSAAGHNGIKSLIEH 123
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G N + RLRIGIGR P + +VLG F+ E+ L I+D ++ + +
Sbjct: 124 LGTNQFARLRIGIGREPPPPVLTNYVLGKFAPEEQEQLPAILDGCVEAVEAVLAKGLEKA 183
Query: 181 LN 182
++
Sbjct: 184 MS 185
>gi|257877902|ref|ZP_05657555.1| peptidyl-tRNA hydrolase [Enterococcus casseliflavus EC20]
gi|257812068|gb|EEV40888.1| peptidyl-tRNA hydrolase [Enterococcus casseliflavus EC20]
Length = 186
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 102/187 (54%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN+GFM +D + + K F AE++E L G + +L+K
Sbjct: 1 MKMIVGLGNPGKKYEKTKHNVGFMVVDALAQKYQATFKKSAFEAEVAEFFLKGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M ++ + E +V++DDLDL G +RL+ G GHNG+KS+
Sbjct: 61 PQTFMNESGRAVGPLMTYFGIYQ-EELVVVYDDLDLALGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ R++IGI RP ++ HVL F+ + +L ID + D
Sbjct: 120 HLDSTVFDRIKIGIDRPRPGQTVVNHVLSPFAKDDLPIVLQSIDKAVEASSDYLTNGDFL 179
Query: 180 F-LNHIV 185
+N
Sbjct: 180 ATMNRFN 186
>gi|90962333|ref|YP_536249.1| peptidyl-tRNA hydrolase [Lactobacillus salivarius UCC118]
gi|119390953|sp|Q1WSG3|PTH_LACS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|90821527|gb|ABE00166.1| Peptidyl-tRNA hydrolase [Lactobacillus salivarius UCC118]
Length = 185
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN +Y RHN+GFM ++R H K+KF + ISE ++G + I+IK
Sbjct: 1 MKMIVGLGNIEKKYEGTRHNVGFMVVERFVEEHGGNFNKEKFDSLISELFINGEKIIVIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M+++ L E+ ++ HDD+DL+ G LRL+ G GHNG+KSI
Sbjct: 61 PTTYMNESGRAVRPLMDYFNLTT-EDIIICHDDMDLEIGHLRLRQKGSAGGHNGIKSIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +KR+R+GI P ++ VL F+ + L + +L + +D
Sbjct: 120 HVGTEKFKRVRVGIDHP-QKMSVVDWVLSRFTKEQEAKLDDGLTRAVAALDDWIENDD-- 176
Query: 180 FLNHIVSVR 188
F+N +
Sbjct: 177 FMNTMNRFN 185
>gi|218283271|ref|ZP_03489326.1| hypothetical protein EUBIFOR_01915 [Eubacterium biforme DSM 3989]
gi|218215961|gb|EEC89499.1| hypothetical protein EUBIFOR_01915 [Eubacterium biforme DSM 3989]
Length = 186
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 106/187 (56%), Gaps = 5/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+ GLGN G EY RHN GFM ID++ ++KF A S+ ++DG IL+K
Sbjct: 1 MKIIIGLGNIGREYENTRHNAGFMAIDKLAQMLEMDFNQEKFSAYFSKKKIDGEDIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG +L + M+FYK+ + E+ LV++DD+D+ G LRL+ G GHNG+KSI
Sbjct: 61 PTTYMNNSGIALRQCMDFYKV-SAEDILVLYDDMDMPVGKLRLRQKGSAGGHNGIKSIIS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G + + R+RIGIG+ D ++ VLG F ++ L ++ A++ K
Sbjct: 120 HIGTQEFDRIRIGIGK--DKMIPVVDWVLGKFPQEQQEDLNHALEQAAKAAKFSIKHSFS 177
Query: 179 SFLNHIV 185
+N
Sbjct: 178 DTMNRYN 184
>gi|306820707|ref|ZP_07454335.1| aminoacyl-tRNA hydrolase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551317|gb|EFM39280.1| aminoacyl-tRNA hydrolase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 187
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 111/186 (59%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNPG +Y +HN+GFMC+D + + KF+A I EG G + IL+K
Sbjct: 1 MYIIVGLGNPGTKYQNTKHNVGFMCLDLLSEKLNIKIDRIKFNALIGEGNYKGEKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++ ++MNFYK+ +N V++DD+D+D G LR++ G HNG+K+I
Sbjct: 61 PQTFMNLSGQAVNQIMNFYKV-ERQNLFVLYDDIDIDIGKLRIRKKGSSGTHNGMKNIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ R RIG+ +PP + +VL F+ E L+P++++ + + +
Sbjct: 120 LLGYDDFPRFRIGVSKPPAYMDLASYVLSKFTDEEVKKLIPVLNDTVDACLYAIETDVDK 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 SMNKYN 185
>gi|330686062|gb|EGG97684.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis VCU121]
Length = 190
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF ID I H F K+KF + +++G + +LI+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVIDYILERHNFTLDKQKFKGAYTIERMNGDKVLLIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + ++++ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVAPLMDYYNI-DVDDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + +KR+RIG+GRP + + +VL FS E + +I++ A ++ +
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMSVPDYVLQRFSKEEMTTMEKVIEHSANAVEAFIETSRFD 179
Query: 179 SFLNHIV 185
+ +N
Sbjct: 180 NVMNEYN 186
>gi|85708584|ref|ZP_01039650.1| peptidyl-tRNA hydrolase [Erythrobacter sp. NAP1]
gi|85690118|gb|EAQ30121.1| peptidyl-tRNA hydrolase [Erythrobacter sp. NAP1]
Length = 189
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 77/185 (41%), Positives = 115/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I GLGNPG +Y +RHN+GFM +D I + F +KKF + EG++ + +L+K
Sbjct: 1 MQIWTGLGNPGPKYALHRHNVGFMVLDVIADMYDFGPIQKKFSGWVQEGRIGTQKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E + FYKL +L+ V HD+LDL +++K GGG AGHNGL+SI +
Sbjct: 61 PATFMNESGRSVGEAIRFYKL-DLDALTVFHDELDLAPFKVKVKQGGGTAGHNGLRSIDK 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++R+RIGIG P + +VLGN++ E+ L ++ I LAK +D F
Sbjct: 120 HLGPDFRRVRIGIGHPGHKDRVSGYVLGNYAKSEQDDLAAMLGAIGAEAEWLAKGDDPRF 179
Query: 181 LNHIV 185
++ +
Sbjct: 180 MSDVA 184
>gi|167036598|ref|YP_001664176.1| peptidyl-tRNA hydrolase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115025|ref|YP_004185184.1| peptidyl-tRNA hydrolase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|238687682|sp|B0KBG1|PTH_THEP3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166855432|gb|ABY93840.1| Aminoacyl-tRNA hydrolase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319928116|gb|ADV78801.1| peptidyl-tRNA hydrolase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 184
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 73/186 (39%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG EY RHN+GFM ID + K KF + + EG G + IL+K
Sbjct: 1 MYVIAGLGNPGREYEGTRHNVGFMVIDELAKKLGMNVTKLKFKSLVGEGNFKGEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTF+N SG++L + +NFYK+P LEN +VI+DD DLD G +R++ G GHNG+ SI
Sbjct: 61 PQTFVNSSGEALYDAVNFYKIP-LENVIVIYDDKDLDVGKIRIRKKGSSGGHNGMNSIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+RIGIG+P ++ HVLG F E+ + + A ++ + +
Sbjct: 120 LLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDIIENGIEH 177
Query: 180 FLNHIV 185
++
Sbjct: 178 AMSKFN 183
>gi|264676948|ref|YP_003276854.1| peptidyl-tRNA hydrolase [Comamonas testosteroni CNB-2]
gi|262207460|gb|ACY31558.1| peptidyl-tRNA hydrolase [Comamonas testosteroni CNB-2]
Length = 212
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG EY + RHN GF ID + ++ + ++ + G L++
Sbjct: 3 KLFVGLGNPGPEYEDTRHNAGFWWIDALARELKVNLVPERSYWGLMARTSIHGQSIWLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ + F+K+ E LV+HD+LD + G ++LK GG GHNGL+ I
Sbjct: 63 PQTFMNLSGKSVGTLARFFKI-QPEEILVVHDELDFEPGVVKLKLGGSHGGHNGLRDIHA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G NY RLR+GIG P + VL + + + I + ++ P + +
Sbjct: 122 QLGSPNYWRLRVGIGHPGHKGEVASWVLKKPAPDQLKLIEDAITHSLKAWPDMVAGQMDK 181
Query: 180 FLNHIVS 186
I +
Sbjct: 182 ATLAIHT 188
>gi|328542807|ref|YP_004302916.1| Peptidyl-tRNA hydrolase [Polymorphum gilvum SL003B-26A1]
gi|326412553|gb|ADZ69616.1| Peptidyl-tRNA hydrolase [Polymorphum gilvum SL003B-26A1]
Length = 249
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 87/186 (46%), Positives = 123/186 (66%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG +Y NRHNIGFM D IH H F W+ +FHAE++EGQL + +L+
Sbjct: 1 MKLIVGLGNPGGKYERNRHNIGFMAADAIHRRHAGFGPWRARFHAEVAEGQLGAEKILLM 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG+++ E + F+KL E+ LVI+D+LDL R+K GGG GHNGL+SIS
Sbjct: 61 KPATYMNESGRAVGEAVRFFKLAP-EDVLVIYDELDLPPAKFRMKAGGGHGGHNGLRSIS 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G Y+RLR+GIG P D + +VLG+F+ + +L P+++ IA + LLA+ +D
Sbjct: 120 AHIGDAYRRLRLGIGHPGDKKLVSNYVLGDFAKVDAEWLDPLLEAIADNAGLLAEGKDSQ 179
Query: 180 FLNHIV 185
F N +
Sbjct: 180 FANKLT 185
>gi|13472407|ref|NP_103974.1| peptidyl-tRNA hydrolase [Mesorhizobium loti MAFF303099]
gi|21263856|sp|Q98HV6|PTH_RHILO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|14023153|dbj|BAB49760.1| peptidyl-tRNA hydrolase [Mesorhizobium loti MAFF303099]
Length = 240
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 89/185 (48%), Positives = 120/185 (64%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + AGLGNPG +Y +NRHN+GFM D I H F W KKF I+EG + G + ILIK
Sbjct: 1 MLVFAGLGNPGAKYADNRHNVGFMAADAIARRHSFSPWSKKFQGLIAEGTIAGEKIILIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQS+ E + FYKL L V +D++DL G LR+KTGGG GHNG++SI
Sbjct: 61 PQTFMNLSGQSVGEALRFYKL-ELSALTVFYDEIDLAEGKLRIKTGGGAGGHNGIRSIDG 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y+R+RIG+G P + HVLG+F+ +R +L P++D IA + ++ K ++ F
Sbjct: 120 HIGNAYRRVRIGVGHPGIKEMVQHHVLGDFAKADREWLDPLLDAIADNAAMIVKGDESGF 179
Query: 181 LNHIV 185
+N
Sbjct: 180 MNKAA 184
>gi|121607938|ref|YP_995745.1| peptidyl-tRNA hydrolase [Verminephrobacter eiseniae EF01-2]
gi|121552578|gb|ABM56727.1| peptidyl-tRNA hydrolase [Verminephrobacter eiseniae EF01-2]
Length = 216
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 71/181 (39%), Positives = 98/181 (54%), Gaps = 3/181 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+ AGLGNPG +Y RHN GF ID + ++ A ++ + G L++
Sbjct: 17 KLFAGLGNPGPDYAATRHNAGFWWIDALARELKTTLLPERSHQALLARTTVHGQSVWLLQ 76
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SGQS+ + F+KL E LV+HD+LD+ G ++LK GGG AGHNGL+ I
Sbjct: 77 PQTFMNHSGQSVASLARFFKL-QPEEILVVHDELDIAPGQVKLKRGGGHAGHNGLRDIHG 135
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLRIGIG P + +I VL S +R + I + R+ P L E
Sbjct: 136 QLGSPDYWRLRIGIGHPGVRSEVINWVLKKPSPEQRALIEDSIAHSLRAWPALLVGEMDK 195
Query: 180 F 180
Sbjct: 196 A 196
>gi|119508860|ref|ZP_01628012.1| peptidyl-tRNA hydrolase [Nodularia spumigena CCY9414]
gi|119466389|gb|EAW47274.1| peptidyl-tRNA hydrolase [Nodularia spumigena CCY9414]
Length = 209
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 76/189 (40%), Positives = 106/189 (56%), Gaps = 6/189 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDG-LRTILIK 60
++ GLGNP +Y + RHNIGF ID + P + +KF E EG G + L+K
Sbjct: 15 LIVGLGNPEPKYDQTRHNIGFAAIDALSRSWHIPLGENRKFQGEYGEGIAPGSRKIRLLK 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQS+ V ++YKLP E+ LVI+DD+DL G RL+ G GHNG+KS
Sbjct: 75 PLTYMNRSGQSIQAVTSWYKLPP-ESVLVIYDDMDLPLGKTRLRLSGSAGGHNGMKSTIS 133
Query: 121 KCG-KNYKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+N+ RLRIGIG+P D + I HVLG FS+ E + ++ + + L K+
Sbjct: 134 HLNTQNFPRLRIGIGKPNDSDNSESISHVLGKFSAAETQLISVLLQFVVECVELSLKQGV 193
Query: 178 VSFLNHIVS 186
+N S
Sbjct: 194 EKAMNRCNS 202
>gi|325479254|gb|EGC82350.1| aminoacyl-tRNA hydrolase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 193
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 63/189 (33%), Positives = 110/189 (58%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+ + GLGNPG +Y RHN GF+ ID + + K KF + +G + G + +L+K
Sbjct: 1 MYCIVGLGNPGLKYENTRHNAGFLTIDYLANKFGIDVKKSKFKSLYGQGVISGQKVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ E++NFYK +++ +VI+DD+D++FGT+R++ G HNG+KSI
Sbjct: 61 PQTYMNNSGEAVREIINFYKF-DIDKLIVIYDDIDIEFGTIRIRKKGSAGTHNGMKSIIY 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + + R++I +G+ P+ + VL F+ E + I + S+ + +
Sbjct: 120 QIQDDKFPRIKIAVGKKPEYMDLANFVLSGFTEKEAEVIREEIKLASDSIETMIESSIDM 179
Query: 180 FLNHIVSVR 188
+N SV+
Sbjct: 180 SMNKFNSVK 188
>gi|304397551|ref|ZP_07379428.1| peptidyl-tRNA hydrolase [Pantoea sp. aB]
gi|304354723|gb|EFM19093.1| peptidyl-tRNA hydrolase [Pantoea sp. aB]
Length = 195
Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + H ++ KF+ + + G L+
Sbjct: 5 KLIVGLANPGAEYAATRHNAGAWYLDLLAERHNQSLKEEGKFYGYTARLMIAGEDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVAAMATFYRIAP-EEILVAHDELDLPPGVAKFKQGGGHGGHNGLKDIIS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + VLG + E+ + ID R L K + +
Sbjct: 124 KLGNNNNFHRLRIGIGHPGDRNKVTGFVLGKPPASEQKLIDDAIDEAVRCTELWLKEDRI 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 KAMNRLHAFK 193
>gi|332173411|gb|AEE22665.1| peptidyl-tRNA hydrolase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 194
Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 5/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G ++ + H + + KF + G L+ P
Sbjct: 6 LIVGLGNPGLEYKYTRHNAGTWLVENLARMHNCTLSLQSKFFGYTGRVTIGGQDIRLLVP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++P E+ LV +D+LDL G + K G NG++ I
Sbjct: 66 TTYMNKSGQAVAALAGFYRIPP-ESILVAYDELDLPPGIAKFKFSGSS-SQNGIRDIVSS 123
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLR+GIG P + +VLG + E+ + ID R + +L K +
Sbjct: 124 LGNNKDFYRLRVGIGHPGHKGKVSGYVLGKAPAKEQEQMDAAIDEGVRCVEILIKDDLKK 183
Query: 180 FLNHIVSVR 188
+N + S +
Sbjct: 184 AMNRLHSFK 192
>gi|325568170|ref|ZP_08144611.1| aminoacyl-tRNA hydrolase [Enterococcus casseliflavus ATCC 12755]
gi|325158371|gb|EGC70522.1| aminoacyl-tRNA hydrolase [Enterococcus casseliflavus ATCC 12755]
Length = 192
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 102/187 (54%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN+GFM +D + + K F AE++E L G + +L+K
Sbjct: 7 MKMIVGLGNPGKKYEKTKHNVGFMVVDALAQKYQATFKKSAFEAEVAEFFLKGEKILLVK 66
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +M ++ + E +V++DDLDL G +RL+ G GHNG+KS+
Sbjct: 67 PQTFMNESGRSVGPLMTYFGIYQ-EELVVVYDDLDLALGKIRLRQKGSAGGHNGIKSLIA 125
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ R++IGI RP ++ HVL F+ + +L ID + D
Sbjct: 126 HLDSTVFDRIKIGIDRPRPGQTVVNHVLSPFAKDDLPIVLQSIDKAVEASSDYLTNGDFL 185
Query: 180 F-LNHIV 185
+N
Sbjct: 186 ATMNRFN 192
>gi|289422642|ref|ZP_06424483.1| aminoacyl-tRNA hydrolase [Peptostreptococcus anaerobius 653-L]
gi|289156942|gb|EFD05566.1| aminoacyl-tRNA hydrolase [Peptostreptococcus anaerobius 653-L]
Length = 186
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 61/186 (32%), Positives = 102/186 (54%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNPG +Y RHN GF +D + K K A I E ++ + IL+K
Sbjct: 1 MYIIMGLGNPGKKYENTRHNAGFDVVDELAKRLNVSIDKIKHKALIGEARIGTEKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG++ + + FYK+ +L+ +V++DD+DLD G LR++ G HNG+KSI +
Sbjct: 61 PQTYMNLSGETAISISQFYKM-DLDKLIVVYDDIDLDIGKLRIRKKGSAGSHNGMKSIIK 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ R+R+G+ +P + VL + + I+ A ++ + +
Sbjct: 120 CLGSQDFPRVRVGVSKPEPGRDLADFVLSRVPKDRQNDMDLAIEKAASTVEEIIRSGLDV 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNKYN 185
>gi|238019603|ref|ZP_04600029.1| hypothetical protein VEIDISOL_01472 [Veillonella dispar ATCC 17748]
gi|237863801|gb|EEP65091.1| hypothetical protein VEIDISOL_01472 [Veillonella dispar ATCC 17748]
Length = 192
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 70/183 (38%), Positives = 104/183 (56%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y +HNIGFM ID I WK++ AE+ +DG + +L+K
Sbjct: 1 MKLVVGLGNPGKQYEATKHNIGFMVIDAIADSVPHTPWKEEQRAEVCSITVDGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +M +YK+ + + I+DD+DL G LR++ G GHNG+KS+
Sbjct: 61 PQTFMNASGESVGPLMRYYKI-DPSDVYCIYDDMDLPVGKLRIRPNGSSGGHNGIKSLIS 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ R R+GIGRP +I HVL FS + + I + +++ +
Sbjct: 120 HIGTENFPRFRVGIGRPLPQWTVIDHVLAPFSEESQEKVQKGIKDTVKAVLGTLEVGIDK 179
Query: 180 FLN 182
+N
Sbjct: 180 GMN 182
>gi|237749453|ref|ZP_04579933.1| peptidyl-tRNA hydrolase [Oxalobacter formigenes OXCC13]
gi|229380815|gb|EEO30906.1| peptidyl-tRNA hydrolase [Oxalobacter formigenes OXCC13]
Length = 195
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 70/192 (36%), Positives = 113/192 (58%), Gaps = 7/192 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D + + W+K +F A +++ +++G L+K
Sbjct: 5 LIVGLGNPGPEYEQTRHNAGFWFVDNLENASQGGRWQKEARFSAFVAKTKINGNDVWLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SGQ++ + F+K+ E+ LV+HDDLD++ G +LK GG AGHNGLK I+
Sbjct: 65 PQTFMNRSGQAVGALARFFKIAP-EDILVVHDDLDINPGLAKLKRGGSSAGHNGLKDITS 123
Query: 121 KC-GKNYKRLRIGIGRPPD---TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G++Y RLRIG+G P + + +I +VL ++ + I + + +PLL +
Sbjct: 124 ALGGQDYWRLRIGVGHPRNQNLKSPVIDYVLQRPRHEDQNLINEAIGHGMQIIPLLCDGQ 183
Query: 177 DVSFLNHIVSVR 188
+ + + R
Sbjct: 184 FDKAMKDLHTNR 195
>gi|163794566|ref|ZP_02188537.1| peptidyl-tRNA hydrolase [alpha proteobacterium BAL199]
gi|159180290|gb|EDP64813.1| peptidyl-tRNA hydrolase [alpha proteobacterium BAL199]
Length = 215
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 77/186 (41%), Positives = 116/186 (62%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y NRHNIGFM ID I + F W+ +F ++EG + G + + +K
Sbjct: 1 MLLFVGLGNPGPSYEGNRHNIGFMAIDEIARVYGFGPWRSRFQGLVAEGHIAGGKVLALK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E F+KL + V +D+LDL G +R+KTGGG GHNG++SI +
Sbjct: 61 PLTFMNESGRSVGEAARFFKLEP-KKVCVFYDELDLVPGKVRVKTGGGAGGHNGIRSIDQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERY-FLLPIIDNIARSLPLLAKREDVS 179
G +++R+R+GIG P D A + +VL +F+ ER ++ +ID +AR P L ++
Sbjct: 120 HLGNDFQRIRLGIGHPGDKAKVHGYVLSDFAKAERNGWVPTLIDAVAREAPALLAGDEGR 179
Query: 180 FLNHIV 185
F++ +
Sbjct: 180 FMSRVT 185
>gi|218515581|ref|ZP_03512421.1| peptidyl-tRNA hydrolase [Rhizobium etli 8C-3]
Length = 176
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 90/177 (50%), Positives = 123/177 (69%), Gaps = 1/177 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH F W KKF AEI+EG+L G + +LIK
Sbjct: 1 MLIIAGLGNPGAKYAGNRHNIGFMAVDAIHRRQSFSPWSKKFKAEIAEGELGGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E M FYKL + + I+D+LDL G RLKTGGG GHNG++S+
Sbjct: 61 PQTYMNLSGEAVGEAMRFYKL-QPADLVAIYDELDLSPGKARLKTGGGHGGHNGIRSLDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
CGK Y+RLR+GIG P + HVLG+F+ + +L P+++ +A + +L ++ED
Sbjct: 120 HCGKEYRRLRLGIGHPGIKEMVQNHVLGDFAKADSDWLEPLLETLADNAEMLVRKED 176
>gi|315640550|ref|ZP_07895658.1| aminoacyl-tRNA hydrolase [Enterococcus italicus DSM 15952]
gi|315483754|gb|EFU74242.1| aminoacyl-tRNA hydrolase [Enterococcus italicus DSM 15952]
Length = 192
Score = 237 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN+GFM +D+I + K F AE+++ +G + +L+K
Sbjct: 1 MKMIVGLGNPGKKYEQTKHNVGFMVVDQIANQENSVFKKTAFEAEVADFFSNGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M ++ + E +V++DDLDL G +RL+ G GHNG+KSI
Sbjct: 61 PQTFMNESGRAVGPLMTYFGVYP-EELVVVYDDLDLQVGKIRLRQKGSAGGHNGIKSIIS 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED-V 178
+ +KR+++GIGRP +++HVL F + + I + + ED V
Sbjct: 120 HLDSQTFKRVKVGIGRPKGKQTVVQHVLSPFDKVDAPLIQEGIAQGVDATVAWMRGEDFV 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 MVMNQFN 186
>gi|260589952|ref|ZP_05855865.1| aminoacyl-tRNA hydrolase [Blautia hansenii DSM 20583]
gi|331084271|ref|ZP_08333376.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 6_1_63FAA]
gi|260539759|gb|EEX20328.1| aminoacyl-tRNA hydrolase [Blautia hansenii DSM 20583]
gi|330401806|gb|EGG81383.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 195
Score = 237 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 68/191 (35%), Positives = 115/191 (60%), Gaps = 2/191 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y + RHN+GF +D + H P A +G + G + I+ K
Sbjct: 1 MLLIAGLGNPGKQYEKTRHNMGFDVVDELIDRHEIPQAGIAHKALYGKGIIGGEKVIVEK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ E +++YK+ +VI+DD+DL+ G +R++ G GHNG+K+I
Sbjct: 61 PLTYMNLSGESVREFIDYYKMDPETEMIVIYDDIDLEPGQIRIRKKGSAGGHNGIKNIIA 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +N+ R+++G+G P + +VLG FSS ER + I + A ++ ++ ++ +
Sbjct: 121 QLGTQNFYRIKVGVGAKPKGWDLADYVLGRFSSKEREVVDAAIQDAADAVEMIIEKGIDA 180
Query: 180 FLNHIV-SVRK 189
+NH S +K
Sbjct: 181 AMNHYNGSGKK 191
>gi|94498283|ref|ZP_01304843.1| peptidyl-tRNA hydrolase [Sphingomonas sp. SKA58]
gi|94422285|gb|EAT07326.1| peptidyl-tRNA hydrolase [Sphingomonas sp. SKA58]
Length = 188
Score = 237 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 113/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I AGLGNPG +Y +RHN+GFM ID I H F A KK+F EG++ + +L+K
Sbjct: 1 MQIWAGLGNPGTQYAMHRHNVGFMAIDLIADMHRFSAPKKQFQGWSQEGRIGNDKILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E M FYKL ++ V HD+LDL +++K GGG+AGHNGL+S
Sbjct: 61 PATFMNESGRSIGEAMRFYKLTP-QDVTVFHDELDLVPMKVKVKRGGGNAGHNGLRSTDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++R+RIGIG P + +VLGN++ E L ++ I P LA +D F
Sbjct: 120 HIGNDFRRVRIGIGHPGHKDKVHGYVLGNYAKSEMDALADMLGAIGAEAPWLAAGDDARF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNEVA 184
>gi|223044417|ref|ZP_03614450.1| peptidyl-tRNA hydrolase [Staphylococcus capitis SK14]
gi|222442206|gb|EEE48318.1| peptidyl-tRNA hydrolase [Staphylococcus capitis SK14]
Length = 190
Score = 237 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF ID I + F K+KF + +L+G + + I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVIDYILERNQFTLDKQKFKGAYTIERLNGDKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +MN+Y + E+ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVAPLMNYYNVEP-EDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + +KR+RIG+GRP + +VL FS E + +I++ AR++ +
Sbjct: 120 MLGTDQFKRIRIGVGRPTSGMSVPDYVLQRFSKEEMVTMDKVIEHAARAVEAFIESSRFD 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 HVMNEYN 186
>gi|218134567|ref|ZP_03463371.1| hypothetical protein BACPEC_02470 [Bacteroides pectinophilus ATCC
43243]
gi|217989952|gb|EEC55963.1| hypothetical protein BACPEC_02470 [Bacteroides pectinophilus ATCC
43243]
Length = 187
Score = 237 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 106/187 (56%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG +Y RHNIGF ID + + K +G + + +L+K
Sbjct: 1 MYIIAGLGNPGKQYEGTRHNIGFAVIDELADAYNINMDMAKHKGICGKGMIGSNKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+ L EV+++YK +++N LVI+DD+ LD G LRL+ G GHNG+KSI
Sbjct: 61 PQTFMNNSGECLREVLDYYK-EDVDNVLVIYDDICLDVGRLRLRPKGSAGGHNGIKSIIA 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+R+G+G P + VLG+F + + ID +++P++ R
Sbjct: 120 HLGTEEFSRIRVGVGDKPKNYDLADWVLGHFPKEQLDDVRAGIDKAVKAVPVVLDRGIEE 179
Query: 180 FLNHIVS 186
+N +
Sbjct: 180 GMNEFNA 186
>gi|299143245|ref|ZP_07036325.1| aminoacyl-tRNA hydrolase [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298517730|gb|EFI41469.1| aminoacyl-tRNA hydrolase [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 190
Score = 237 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+IVAGLGNPG +Y RHN+GF+ ID + + KF + E + G + L+K
Sbjct: 1 MYIVAGLGNPGRQYENTRHNMGFLAIDELARKLNVNVNRIKFKGLVGETNIAGEKVYLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQ + E+ NFYK+ N +N +VI DD+D++F +L++K G HNGLKSI
Sbjct: 61 PQTYMNNSGQCIYEICNFYKV-NPKNLIVIVDDIDIEFSSLKIKKKGSAGTHNGLKSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ R++IG+G+ + VL FS E+ + I+N A+S+ + + S
Sbjct: 120 MLQSDEFPRIKIGVGKQGQNEDLADFVLSGFSKSEQTEMNNTIENAAQSVIEIIENGIES 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNKYN 185
>gi|300716399|ref|YP_003741202.1| Peptidyl-tRNA hydrolase [Erwinia billingiae Eb661]
gi|299062235|emb|CAX59352.1| Peptidyl-tRNA hydrolase [Erwinia billingiae Eb661]
Length = 195
Score = 237 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + H + KF+ + + G L+
Sbjct: 5 KLIVGLANPGAEYAATRHNAGAWYVDLLAQRHNQALKEESKFYGYTARLNIGGEDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E L+ HD+LDL G + K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVAAMATFYRITP-EEILIAHDELDLPPGVAKFKQGGGHGGHNGLKDIIS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG S E+ + ID AR + K + +
Sbjct: 124 KLGNNLNFHRLRIGIGHPGDRNKVVGFVLGKPQSAEQSLIDNAIDEAARCTEVWLKEDRL 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|314932724|ref|ZP_07840094.1| aminoacyl-tRNA hydrolase [Staphylococcus caprae C87]
gi|313654554|gb|EFS18306.1| aminoacyl-tRNA hydrolase [Staphylococcus caprae C87]
Length = 190
Score = 237 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF ID I + F K+KF + +L+G + + I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVIDYILERNQFTLDKQKFKGAYTIERLNGDKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +MN+Y + E+ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVAPLMNYYNVEP-EDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + +KR+RIG+GRP + + +VL FS E + +I++ AR++ +
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMSVPDYVLQRFSKEEMVTMDKVIEHAARAVEAFIESSRFD 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 HVMNEYN 186
>gi|110803012|ref|YP_699741.1| peptidyl-tRNA hydrolase [Clostridium perfringens SM101]
gi|119390928|sp|Q0SQ66|PTH_CLOPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110683513|gb|ABG86883.1| peptidyl-tRNA hydrolase [Clostridium perfringens SM101]
Length = 188
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 70/189 (37%), Positives = 116/189 (61%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHNIGF ID + + + ++KF EG ++ + IL+K
Sbjct: 1 MILIVGLGNPGKQYEKTRHNIGFDVIDYMANKYNIDVNREKFKGICGEGFIENKKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ E +NFYKL + E +V++DD+ LD G LR++ G GHNG+KSI +
Sbjct: 61 PLTYMNLSGESIREFVNFYKLEDDE-IIVVYDDISLDIGRLRIREKGSAGGHNGIKSIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G+P +++ HVLG FS +R + +I ++ ++ + K +
Sbjct: 120 NLGGDKFPRVKVGVGQP--KDNLVNHVLGKFSKEDREHIEKVIPVVSDAIVEIVKNDAKE 177
Query: 180 FLNHIVSVR 188
+N V
Sbjct: 178 SMNKFNGVN 186
>gi|148554298|ref|YP_001261880.1| peptidyl-tRNA hydrolase [Sphingomonas wittichii RW1]
gi|166229455|sp|A5V626|PTH_SPHWW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148499488|gb|ABQ67742.1| peptidyl-tRNA hydrolase [Sphingomonas wittichii RW1]
Length = 189
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 77/185 (41%), Positives = 109/185 (58%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I GLGNPG +Y +RHN+GFM +D I H F WKK+F + G++ ++ +L+K
Sbjct: 1 MQIWVGLGNPGAQYAMHRHNVGFMAVDTIAEVHRFDPWKKQFQGWSATGRIGNVKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E M F+K + V HD+LDL +++KTGGG AGHNGL+S
Sbjct: 61 PATFMNESGRSVGEAMRFFKRETG-DVTVFHDELDLAPFKVKVKTGGGTAGHNGLRSTEA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++R+RIGIG P + +VLGN+ E L ++ IA LA +D F
Sbjct: 120 HIGNAFRRVRIGIGHPGHKDRVTGYVLGNYVKAELDPLAGMLGAIASEADWLASGDDARF 179
Query: 181 LNHIV 185
++ I
Sbjct: 180 MSEIA 184
>gi|77164044|ref|YP_342569.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani ATCC 19707]
gi|254435162|ref|ZP_05048669.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani AFC27]
gi|119390970|sp|Q3JDQ7|PTH_NITOC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|76882358|gb|ABA57039.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani ATCC 19707]
gi|207088273|gb|EDZ65545.1| peptidyl-tRNA hydrolase [Nitrosococcus oceani AFC27]
Length = 193
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 102/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+++ GLGNPG EY + RHN GF +D S KF + + G L+K
Sbjct: 6 WLLIGLGNPGTEYAQTRHNAGFWWLDAFASELGINFKPGAKFFGDYARANWRGHDLWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++L ++N+Y++P LE+ L+ HDDLDL G +LK GG GHNGL+ I
Sbjct: 66 PATFMNRSGQAVLALLNYYQIP-LEHLLIAHDDLDLPPGVAKLKRAGGHGGHNGLRDIIN 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G+ ++ RLR+G+G P ++ +VL S +R + I LP + E
Sbjct: 125 RLGRRDFLRLRLGVGHPGSGQDVVSYVLNRPSREDRQAIEAAIGAGLEVLPEVLAGEMEK 184
Query: 180 FLNHIVS 186
++ + S
Sbjct: 185 AMHRLHS 191
>gi|291531664|emb|CBK97249.1| peptidyl-tRNA hydrolase [Eubacterium siraeum 70/3]
Length = 209
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN GFM D + K KF + I++ ++G I++KP
Sbjct: 24 YLIVGLGNPGTQYENTRHNAGFMAADTLAEKLGVQIKKLKFKSLIADCAIEGRHCIIMKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ E M+FYK+P +N LV++DD+ LD G R++ G D GHNG+KSI
Sbjct: 84 STFMNNSGEAVGEAMSFYKIPP-QNILVMYDDISLDVGRTRIRRKGSDGGHNGIKSIILH 142
Query: 122 CGKN-YKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R++IG+G P + VL F + L +DN A + L+ + +
Sbjct: 143 TNSDAFPRIKIGVGAKPHPDFPLADWVLSGFKKEDGENLEKSLDNAAEAAKLIIAGKIDA 202
Query: 180 FLNHIVS 186
+N S
Sbjct: 203 AMNKYNS 209
>gi|254512451|ref|ZP_05124518.1| peptidyl-tRNA hydrolase [Rhodobacteraceae bacterium KLH11]
gi|221536162|gb|EEE39150.1| peptidyl-tRNA hydrolase [Rhodobacteraceae bacterium KLH11]
Length = 228
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 84/185 (45%), Positives = 114/185 (61%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +DRI H F WK KF AEI+EG+L + +L+K
Sbjct: 1 MKLFVGLGNPGAKYARNRHNIGFMAMDRIAGDHGFGPWKSKFQAEIAEGRLGSQKILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SGQS+ E M FYKL + + V HD+LDL G +R+K GGG AGHNGL+SI +
Sbjct: 61 PQTFMNRSGQSVGEAMRFYKL-DSTDVTVFHDELDLAPGKVRVKAGGGHAGHNGLRSIHD 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y R+R+GIG P + +VL +F+ + +L ++ ++ LA F
Sbjct: 120 HISPAYDRVRLGIGHPGRKEMVSPYVLSDFAKADATWLDDVLQGVSDGAGYLANDAGGKF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNAVA 184
>gi|257462465|ref|ZP_05626877.1| peptidyl-tRNA hydrolase [Fusobacterium sp. D12]
gi|317060122|ref|ZP_07924607.1| peptidyl-tRNA hydrolase [Fusobacterium sp. D12]
gi|313685798|gb|EFS22633.1| peptidyl-tRNA hydrolase [Fusobacterium sp. D12]
Length = 186
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 68/188 (36%), Positives = 107/188 (56%), Gaps = 2/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHN+GFM ID H K+KF +++SE ++G + +K
Sbjct: 1 MKLVVGLGNPGKKYEKTRHNVGFMAIDLFLKKHAISGEKEKFLSKVSETIMNGEKIYFLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG +L E++ FYK+ L+ LV++DD DL G LR K G GHNG+KSI
Sbjct: 61 PQTYMNLSGNALHEIVQFYKINPLDEILVVYDDKDLPLGKLRYKLKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ G+ + R++ GIG ++I V+G+F E L +++ + ++
Sbjct: 121 QIGQEFCRIKCGIG--STKGNVIDFVIGDFQKSEEEELQSMLELAVEGIKDWIDNKNSDK 178
Query: 181 LNHIVSVR 188
+ + +
Sbjct: 179 MMQKYNKK 186
>gi|299531511|ref|ZP_07044917.1| peptidyl-tRNA hydrolase [Comamonas testosteroni S44]
gi|298720474|gb|EFI61425.1| peptidyl-tRNA hydrolase [Comamonas testosteroni S44]
Length = 212
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG EY + RHN GF ID + ++ + ++ + G L++
Sbjct: 3 KLFVGLGNPGPEYEDTRHNAGFWWIDALARELKVNLVPERSYWGLMARTSIHGQSIWLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ + F+K+ E LV+HD+LD + G ++LK GG GHNGL+ I
Sbjct: 63 PQTFMNLSGKSVGTLARFFKI-QPEEILVVHDELDFEPGVVKLKLGGSHGGHNGLRDIHA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G NY RLR+GIG P + VL + + + I + ++ P + +
Sbjct: 122 QLGSPNYWRLRVGIGHPGHKGEVASWVLKKPAPDQLKLIEDAIAHSLKAWPDMVAGQMDK 181
Query: 180 FLNHIVS 186
I +
Sbjct: 182 ATLAIHT 188
>gi|224543055|ref|ZP_03683594.1| hypothetical protein CATMIT_02255 [Catenibacterium mitsuokai DSM
15897]
gi|224523995|gb|EEF93100.1| hypothetical protein CATMIT_02255 [Catenibacterium mitsuokai DSM
15897]
Length = 184
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 103/186 (55%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF C+D + K+KF ++ + G IL+K
Sbjct: 1 MKLIVGLGNPGKEYDMTRHNTGFYCLDVLSDEMNQSIDKEKFKGLYTKFKYKGEDVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ VM F+K+P +E+ LVI+DD+D+ G LRL+ G GHNG+KSI
Sbjct: 61 PQTYMNNSGESVAAVMQFFKIP-VEDLLVIYDDMDMPTGKLRLREKGSAGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +N+KR+R+GI + + ++ VLG+FS E + ++
Sbjct: 120 HVGTQNFKRIRVGISKNKLYS-VVDWVLGHFSKEEEKLISEGAKRATEAVLCYLDDSFNK 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 AMNKYN 184
>gi|302542982|ref|ZP_07295324.1| aminoacyl-tRNA hydrolase [Streptomyces hygroscopicus ATCC 53653]
gi|302460600|gb|EFL23693.1| aminoacyl-tRNA hydrolase [Streptomyces himastatinicus ATCC 53653]
Length = 198
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 78/190 (41%), Positives = 107/190 (56%), Gaps = 6/190 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD-----GLRT 56
++V GLGNPG EY NRHN+GFM + + K A++ EG++ R
Sbjct: 10 WLVVGLGNPGPEYAANRHNVGFMVAELLAERMGGRFKAHKSRAQVVEGRIGPPGPGSRRV 69
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
I+ KP +FMNLSG + +FYK+P + + IHD+LD+D+G LRLK GGGD GHNGLK
Sbjct: 70 IVAKPMSFMNLSGGPTTALRDFYKVPT-SHVIAIHDELDIDYGALRLKLGGGDNGHNGLK 128
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
SI++ G +Y R+R GIGRPP + VL +FS+ ER L +D A ++ L
Sbjct: 129 SITKSGGPDYFRIRFGIGRPPGRMDVAAFVLKDFSAAERRELDYFVDRAADAVETLIVDG 188
Query: 177 DVSFLNHIVS 186
S
Sbjct: 189 LERAQGTYNS 198
>gi|89056083|ref|YP_511534.1| peptidyl-tRNA hydrolase [Jannaschia sp. CCS1]
gi|119390951|sp|Q28LA3|PTH_JANSC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|88865632|gb|ABD56509.1| peptidyl-tRNA hydrolase [Jannaschia sp. CCS1]
Length = 239
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 82/185 (44%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIG+M +DR+ H F W+ KF E+SEG LDG + +L+K
Sbjct: 1 MQLWVGLGNPGAKYAGNRHNIGWMAVDRVAEDHGFAPWRAKFQGEVSEGVLDGEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E M FYKL + + V HD++DL +R+K GGG AGHNGL+SI +
Sbjct: 61 PTTFMNLSGQSVGEAMRFYKL-DSTDVTVWHDEIDLAPAKIRVKAGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F+ + +L ++ ++ P LA+ + F
Sbjct: 120 HIGPHYDRVRLGVGHPGHKDRVPGYVLSDFAKADAGWLDDVLRGVSDGAPHLARGDGGKF 179
Query: 181 LNHIV 185
LN +
Sbjct: 180 LNAVA 184
>gi|70727508|ref|YP_254424.1| peptidyl-tRNA hydrolase [Staphylococcus haemolyticus JCSC1435]
gi|119391015|sp|Q4L3F9|PTH_STAHJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68448234|dbj|BAE05818.1| peptidyl-tRNA hydrolase [Staphylococcus haemolyticus JCSC1435]
Length = 190
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF ID I H F K+KF + +L+G + + I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVIDYILKKHNFSLDKQKFKGAYTIERLNGDKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + +E+ +V++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVGPLMDYYNV-EVEDLIVLYDDLDLSQGQIRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + +KR+RIG+GRP + + +VL FS E + +I++ A ++ +
Sbjct: 120 HLGTDQFKRIRIGVGRPTNGMSVPDYVLQKFSKEEMITMDKVIEHSAHAVEAFIESSRFD 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 HVMNQYN 186
>gi|224118918|ref|XP_002317938.1| predicted protein [Populus trichocarpa]
gi|222858611|gb|EEE96158.1| predicted protein [Populus trichocarpa]
Length = 271
Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 104/193 (53%), Gaps = 6/193 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D + F A +G + + + KP
Sbjct: 78 WLIVGLGNPGKKYHSTRHNVGFQMVDALADAEGISISGVSFKALFGKGFIGNVPVMFAKP 137
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+S+ ++++YK+P L+ L+I+DDLDL F LRL GG GHNG+KS+
Sbjct: 138 QTFMNASGESVGAIVSYYKIP-LKQVLLIYDDLDLPFAKLRLLPKGGHGGHNGMKSVINH 196
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR---E 176
+++ RLRIGIGRPP VL F+ E L + ++ +L +
Sbjct: 197 FKGNRDFPRLRIGIGRPPGKMDTANFVLRPFTKQEHEELDFMFQQGIEAVRILLLEGLNK 256
Query: 177 DVSFLNHIVSVRK 189
+F+N S+ +
Sbjct: 257 SATFVNSTKSMEQ 269
>gi|56695713|ref|YP_166064.1| peptidyl-tRNA hydrolase [Ruegeria pomeroyi DSS-3]
gi|68052881|sp|Q5LV91|PTH_SILPO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56677450|gb|AAV94116.1| peptidyl-tRNA hydrolase [Ruegeria pomeroyi DSS-3]
Length = 239
Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y NRHNIGFM +DRI H F W+ KF +I+EG+L + +L+K
Sbjct: 1 MRLFVGLGNPGAKYARNRHNIGFMALDRIAEDHGFGPWRVKFQGQIAEGRLGREKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN SGQS+ E M FYKL + + V+HD+LDL G +++K GGG AGHNGL+SI +
Sbjct: 61 PETFMNRSGQSVGEAMRFYKL-DSTDITVLHDELDLAPGKVKVKAGGGHAGHNGLRSIHD 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y R+R+GIG P + +VL +F+ + +L ++ ++ P LA + F
Sbjct: 120 HIGAAYDRVRLGIGHPGRKEAVAGYVLHDFARADEDWLEDVLRGVSEGAPHLAAGDGARF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNSVA 184
>gi|313884481|ref|ZP_07818242.1| aminoacyl-tRNA hydrolase [Eremococcus coleocola ACS-139-V-Col8]
gi|312620265|gb|EFR31693.1| aminoacyl-tRNA hydrolase [Eremococcus coleocola ACS-139-V-Col8]
Length = 186
Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y RHN+GF ID+ H K+KF A+ + +L+K
Sbjct: 1 MKLFVGLGNPGEKYEATRHNVGFAVIDQFMQDHGLAMTKQKFRADYEIWHSPKEKVLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++L +M++Y + +E+ +V++DDLDLD G +RL+ G GHNG+KSI
Sbjct: 61 PFTYMNASGEAVLPIMSYYGI-GMEDLVVVYDDLDLDPGRIRLRQKGSSGGHNGMKSIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED-V 178
G + + R+R+GIGRP ++ HVL F E+ + + A +L ED +
Sbjct: 120 ILGSDQFNRIRVGIGRPHPGWKVVDHVLAPFDKTEQVLIDQAVGQAASALTDYLDNEDFI 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 QTMNKFN 186
>gi|254415168|ref|ZP_05028930.1| peptidyl-tRNA hydrolase [Microcoleus chthonoplastes PCC 7420]
gi|196177974|gb|EDX72976.1| peptidyl-tRNA hydrolase [Microcoleus chthonoplastes PCC 7420]
Length = 201
Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQ-LDGLRTILIK 60
++ GLGNP +Y + RHNIGF +D + + ++F A ++EG+ L G + ++K
Sbjct: 11 LIVGLGNPEPKYDKTRHNIGFEVVDELARRVQISWSENRRFQALLAEGRGLTGDKLRVLK 70
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ +++YK+P E+ L+++D+LDL G LR++ G GHNG+KS
Sbjct: 71 PLTYMNRSGQAIRAAIDWYKMPP-ESVLIVYDELDLPVGRLRIRLSGSAGGHNGMKSAIA 129
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLRIGIG+ + + HVLG FS E + +I ++ L K
Sbjct: 130 HLGTQGFPRLRIGIGKSDPEKNTVGHVLGKFSPDESKIITEVIQLAVDAIELSLKEGVEK 189
Query: 180 FLNHIVS 186
++ S
Sbjct: 190 AMSLYNS 196
>gi|332188708|ref|ZP_08390422.1| peptidyl-tRNA hydrolase [Sphingomonas sp. S17]
gi|332011272|gb|EGI53363.1| peptidyl-tRNA hydrolase [Sphingomonas sp. S17]
Length = 191
Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats.
Identities = 80/185 (43%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y +RHN+GFM ID I H F KK+F EG++ G + +L+K
Sbjct: 1 MQVWTGLGNPGPQYAMHRHNVGFMAIDAIAEVHGFGPVKKQFQGWTQEGRIGGQKILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ E + FYKL +E V HD+LD+ +++KTGGG AGHNGL+SI +
Sbjct: 61 PATFMNESGRSVGEALRFYKL-GVEALTVFHDELDIVPFRVKVKTGGGTAGHNGLRSIDQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++R+R+GIG P + +VLGN++ E L ++ +A LA+ +DV F
Sbjct: 120 HLGPDFRRVRLGIGHPGHKDRVTGYVLGNYAKAEIEPLSDLLGALAAEAHWLAEGDDVRF 179
Query: 181 LNHIV 185
+N I
Sbjct: 180 VNDIA 184
>gi|149378001|ref|ZP_01895726.1| peptidyl-tRNA hydrolase [Marinobacter algicola DG893]
gi|149357710|gb|EDM46207.1| peptidyl-tRNA hydrolase [Marinobacter algicola DG893]
Length = 195
Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats.
Identities = 70/189 (37%), Positives = 102/189 (53%), Gaps = 3/189 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y RHN G + ++ + +KK+H + QL GL L+
Sbjct: 6 LMVVGLGNPGPDYANTRHNAGALFVEALARETGQSLRPEKKYHGLYARIQLQGLDLHLLN 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG S+ + +F+K+ + LV HD+LD+ GT R K GG GHNGL+
Sbjct: 66 PSTYMNRSGLSIKALADFFKI-QPQQILVAHDELDIPPGTARFKKSGGHGGHNGLRDTIA 124
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N ++RLRIGIG P D+ + +VLG E L +I+ I R LP A + +
Sbjct: 125 HLGTNEFQRLRIGIGHPGDSRQVTGYVLGRLGKRETEELNAVINEIIRVLPDAASGKLPA 184
Query: 180 FLNHIVSVR 188
+N + S +
Sbjct: 185 AMNRLHSFK 193
>gi|300087756|ref|YP_003758278.1| peptidyl-tRNA hydrolase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527489|gb|ADJ25957.1| peptidyl-tRNA hydrolase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 188
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 72/189 (38%), Positives = 106/189 (56%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGF + R FH K+ + I EG++ IL K
Sbjct: 1 MKLIIGLGNPGKEYHHTRHNIGFEILGRFARFHNISFNKRSCQSRIGEGKIGDQPVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQ++ ++ YK+ ++ +VIHDDLDL G +R++ GG GHNG+KSI +
Sbjct: 61 PQTYMNLSGQAVAALIKRYKVTP-KDIIVIHDDLDLPIGKIRIRLEGGAGGHNGIKSIIQ 119
Query: 121 KCGK-NYKRLRIGIGRP---PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G + R+++GIGRP D I+ HVL FS E + + + +L + +
Sbjct: 120 SIGTICFTRIKVGIGRPTTTGDRIEIVDHVLTQFSQDEAEMINKTVIDALGALETMISGD 179
Query: 177 DVSFLNHIV 185
+ +N
Sbjct: 180 YNAAMNKFN 188
>gi|298244966|ref|ZP_06968772.1| peptidyl-tRNA hydrolase [Ktedonobacter racemifer DSM 44963]
gi|297552447|gb|EFH86312.1| peptidyl-tRNA hydrolase [Ktedonobacter racemifer DSM 44963]
Length = 227
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF ID + W+++ A I+ L+ + +L+K
Sbjct: 1 MKLLVGLGNPGAQYERTRHNVGFRVIDALAEKLGV-RWERRGRAMIANATLEHEKVVLVK 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E+ ++KL E+ LV++D+LDL G LR++ G GHNG+KS+ +
Sbjct: 60 PITFMNNSGEAVGELQRWFKLEP-EDILVVYDELDLPVGQLRVRARGSAGGHNGMKSLIQ 118
Query: 121 KCGKN-YKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ + RLR+GIGRP + I +VLG E LL D + L+ +
Sbjct: 119 YLHTDQFPRLRVGIGRPANRRLDTINYVLGIPPKDEYITLLQTEDKALEAFSLILREGLD 178
Query: 179 SFLNHIV 185
+N +
Sbjct: 179 QAMNTLN 185
>gi|237809048|ref|YP_002893488.1| peptidyl-tRNA hydrolase [Tolumonas auensis DSM 9187]
gi|259535291|sp|C4L932|PTH_TOLAT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|237501309|gb|ACQ93902.1| peptidyl-tRNA hydrolase [Tolumonas auensis DSM 9187]
Length = 197
Score = 236 bits (604), Expect = 8e-61, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G + + + + K+ Q++G L+ P
Sbjct: 7 LIVGLGNPGPEYANTRHNAGAWYVASLAERYNGSLREDPKYFGLTGRIQINGQDVRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S++ + F+++P E+ LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 67 TTFMNLSGKSVVALAKFFQIPP-ESILVAHDELDLPPGVAKFKQGGGHGGHNGLKDIINK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + RLR+GIG P ++ VL E+ + +D R+ +L +
Sbjct: 126 LGNNNQFHRLRLGIGHPGTKEQVVGFVLTKAPKAEQQLIDDALDEAVRATDILFTNDMTK 185
Query: 180 FLNHIVSVR 188
+N + S +
Sbjct: 186 AMNRLHSFK 194
>gi|221135306|ref|ZP_03561609.1| peptidyl-tRNA hydrolase [Glaciecola sp. HTCC2999]
Length = 194
Score = 236 bits (604), Expect = 8e-61, Method: Composition-based stats.
Identities = 65/188 (34%), Positives = 95/188 (50%), Gaps = 5/188 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G M + + F + KF + G L+ P
Sbjct: 6 LIVGLGNPGPEYQNTRHNAGEMFVSSLARTFSCTLKPESKFFGLTGRTNIAGRDVRLLYP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + FYK+ + N LV +D+LDL G + K GG NG++ I +
Sbjct: 66 TTYMNKSGQSVAAIAQFYKI-EVANILVAYDELDLPPGIAKFKVGGSS-SQNGIRDIVSR 123
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLRIGIG P + + +VLG + E+ + ID RS +L K + V+
Sbjct: 124 MGNQKDFLRLRIGIGHPGHKSRVTGYVLGKAPATEQAQIDAAIDESIRSTEILIKEDLVA 183
Query: 180 FLNHIVSV 187
+ S
Sbjct: 184 AQQRLHSF 191
>gi|67925084|ref|ZP_00518461.1| Peptidyl-tRNA hydrolase [Crocosphaera watsonii WH 8501]
gi|67853058|gb|EAM48440.1| Peptidyl-tRNA hydrolase [Crocosphaera watsonii WH 8501]
Length = 204
Score = 236 bits (604), Expect = 8e-61, Method: Composition-based stats.
Identities = 71/189 (37%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGL-RTILIK 60
++ GLGNP +Y + RHNIGF +D + ++F I+EG + L+K
Sbjct: 14 LIVGLGNPEPKYDKTRHNIGFEIVDILAETWQLSWKETRRFQGMIAEGNSRNQQKIYLLK 73
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQS+ V ++YKL + EN LVI+DD+DL G LR++ G GHNG+KSI
Sbjct: 74 PSTYMNRSGQSVRAVTDWYKLKS-ENVLVIYDDMDLPIGRLRMRLSGSAGGHNGMKSIIS 132
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +N+ RLRIGIG+ + I HVLG FS ER + + ++ K
Sbjct: 133 HLGGQNFPRLRIGIGKSNQVDNTIPHVLGRFSPEERKIIDKTYPLVVDAIETTLKEGVEK 192
Query: 180 FLNHIVSVR 188
++ S +
Sbjct: 193 AMSQFNSQK 201
>gi|319399659|gb|EFV87913.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis FRI909]
Length = 190
Score = 236 bits (604), Expect = 8e-61, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF +D I H F K+KF + +L+G + + I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVVDDILERHQFTLDKQKFKGAYTIERLNGEKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSGQ++ +M++Y + ++E+ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGQAVAPLMDYYNV-DVEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + +KR+RIG+GRP + + +VL FS E + +I++ A+++ +
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMSVPDYVLQKFSKEEMIIMEKVIEHSAKAVEFFIESSRFD 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 HVMNEFN 186
>gi|325678539|ref|ZP_08158150.1| aminoacyl-tRNA hydrolase [Ruminococcus albus 8]
gi|324109758|gb|EGC03963.1| aminoacyl-tRNA hydrolase [Ruminococcus albus 8]
Length = 208
Score = 236 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 115/187 (61%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+ GLGNPG +Y +RHN GF+ +D + F ++KF A++ + G +++KP
Sbjct: 23 YIIVGLGNPGIQYDGSRHNAGFITVDALEKKLGFSCERRKFKAKVGNTVIGGKNCLVMKP 82
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+TFMNLSG ++ E M+FYK+P +EN +VI DD+ L+ G LR++ G GHNG+KSI +
Sbjct: 83 ETFMNLSGDAVSEAMDFYKIP-IENVIVIFDDISLEPGQLRIRRKGSAGGHNGIKSIIAQ 141
Query: 122 CG-KNYKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG +++ R+++G+G+ P+ A + + VLG FS +R + + +L L+ +
Sbjct: 142 CGSEDFPRIKLGVGKKPNPAYDLAKWVLGRFSEDDRKKIDIAAEKACDALELMVNGKIDE 201
Query: 180 FLNHIVS 186
++ S
Sbjct: 202 AMSRFNS 208
>gi|82701725|ref|YP_411291.1| peptidyl-tRNA hydrolase [Nitrosospira multiformis ATCC 25196]
gi|119390969|sp|Q2YBH2|PTH_NITMU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|82409790|gb|ABB73899.1| peptidyl-tRNA hydrolase [Nitrosospira multiformis ATCC 25196]
Length = 191
Score = 236 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 64/191 (33%), Positives = 97/191 (50%), Gaps = 3/191 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILI 59
M ++ GLGNPG EY RHN G + R+ KFH + + L+
Sbjct: 1 MKLIVGLGNPGREYAATRHNAGAWWVVRLADQLGVTLKADGKFHGLCARIGQGESESWLL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
PQT+MN SG+++ + FY++ E LV+HD+LDL G RLK GG GHNGLK I
Sbjct: 61 NPQTYMNASGRAVAALCRFYRI-QPEQMLVVHDELDLPPGVSRLKLDGGLGGHNGLKDIV 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G + + RLRIGIG P + ++ +VL E + I++ PL+A+
Sbjct: 120 AHLGTREFWRLRIGIGHPGEKHAVVNYVLQPPRKEEAALIDTAINDSLEVWPLIAEGNYQ 179
Query: 179 SFLNHIVSVRK 189
+ + + + ++
Sbjct: 180 AAMMRLHTQKQ 190
>gi|255631022|gb|ACU15875.1| unknown [Glycine max]
Length = 228
Score = 236 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 100/190 (52%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D I F + +G + + IL KP
Sbjct: 30 WLIVGLGNPGKKYAATRHNVGFEMVDTIAEAEGISMTTVSFKSLFGKGFIGDVPVILAKP 89
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+S+ ++++YK+P L+ L I DDLDL F LRL GG GHNG+KS+
Sbjct: 90 QTYMNSSGESVGAIVSYYKIP-LKQVLEIFDDLDLPFAKLRLLPKGGHGGHNGVKSVINH 148
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ RLRIGIGRPP + VL F+ ER L + + ++ +L
Sbjct: 149 FKGNSGFPRLRIGIGRPPGKMDPVAFVLRTFTKHEREELNFTLQDGLEAVRILLLEGFDK 208
Query: 180 FLNHIVSVRK 189
+ S +K
Sbjct: 209 SATFVNSAKK 218
>gi|27469199|ref|NP_765836.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis ATCC 12228]
gi|57866046|ref|YP_187736.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis RP62A]
gi|251809808|ref|ZP_04824281.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875432|ref|ZP_06284304.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis SK135]
gi|293366144|ref|ZP_06612831.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|38257850|sp|Q8CQU9|PTH_STAES RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052877|sp|Q5HRQ3|PTH_STAEQ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|27316748|gb|AAO05923.1|AE016751_218 peptidyl-tRNA hydrolase [Staphylococcus epidermidis ATCC 12228]
gi|57636704|gb|AAW53492.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis RP62A]
gi|251806676|gb|EES59333.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis BCM-HMP0060]
gi|281295789|gb|EFA88311.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis SK135]
gi|291319738|gb|EFE60097.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329723936|gb|EGG60461.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis VCU144]
gi|329733015|gb|EGG69354.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis VCU028]
gi|329737896|gb|EGG74124.1| aminoacyl-tRNA hydrolase [Staphylococcus epidermidis VCU045]
Length = 190
Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF +D I H F K+KF + +L+G + + I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVVDDILERHQFTLDKQKFKGAYTIERLNGEKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSGQ++ +M++Y + ++E+ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGQAVAPLMDYYNV-DVEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + +KR+RIG+GRP + + +VL FS E + +I++ AR++ +
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMSVPDYVLQKFSKEEMIIMEKVIEHSARAVESFIESSRFD 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 HVMNEFN 186
>gi|296131719|ref|YP_003638966.1| peptidyl-tRNA hydrolase [Thermincola sp. JR]
gi|296030297|gb|ADG81065.1| peptidyl-tRNA hydrolase [Thermincola potens JR]
Length = 187
Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 73/186 (39%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGF+ ++++ K +F + EG + +L+K
Sbjct: 1 MKLIVGLGNPGKEYEFTRHNIGFLVLEQLAEKWGIAVNKNRFKSLFGEGIFQEDKIVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSGQ++L+ + FYKL + + LVI+DD+DL G LRL+ GG GH G++SI
Sbjct: 61 PQTFMNLSGQAVLDAVRFYKLEST-DILVIYDDMDLPTGRLRLRKSGGAGGHRGMESIIY 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
N+ RLRIGIG+P ++HVLG F ER ++ + ++ L+ K
Sbjct: 120 LLNTENFPRLRIGIGKPGPDKDAVQHVLGRFGEEERERVVAAVSKAVAAVELVLKEGVEK 179
Query: 180 FLNHIV 185
+N +
Sbjct: 180 AMNTVN 185
>gi|188534021|ref|YP_001907818.1| Peptidyl-tRNA hydrolase [Erwinia tasmaniensis Et1/99]
gi|238689695|sp|B2VEI9|PTH_ERWT9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|188029063|emb|CAO96931.1| Peptidyl-tRNA hydrolase [Erwinia tasmaniensis Et1/99]
Length = 195
Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G D + H + KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAATRHNAGAWYADLLAERHNQSLKEESKFFGFTARLNLGGEDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++P E LV HD+LDL G + K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVAAMATFYRIP-AEEILVAHDELDLPPGVAKFKQGGGHGGHNGLKDIIS 123
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G +N+ RLRIGIG P D ++ VLG + E+ + +D R + K + +
Sbjct: 124 RLGNNQNFHRLRIGIGHPGDRQKVVGFVLGKPQAAEQRLIDDAVDEAVRCTEVWMKEDRL 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|242371668|ref|ZP_04817242.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis M23864:W1]
gi|242350617|gb|EES42218.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis M23864:W1]
Length = 190
Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF ID + + F K+KF + +L+G + + I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVIDYLLERNQFTLDKQKFKGAYTIERLNGDKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + + E+ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVAPLMDYYNV-DTEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + +KR+RIG+GRP + + +VL FS E + +I++ AR++ +
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMSVPDYVLQRFSKEEMVTMEKVIEHSARAVEAFIESSRFD 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 HVMNEYN 186
>gi|298490956|ref|YP_003721133.1| peptidyl-tRNA hydrolase ['Nostoc azollae' 0708]
gi|298232874|gb|ADI64010.1| peptidyl-tRNA hydrolase ['Nostoc azollae' 0708]
Length = 209
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 73/192 (38%), Positives = 106/192 (55%), Gaps = 9/192 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQL-DGLRTILIK 60
++ GLGNP +Y + RHNIGF ID + P + +KF + EG G + L+K
Sbjct: 15 LIVGLGNPEPKYEQTRHNIGFTAIDALSRPWQIPLAENRKFQGQFGEGTAPGGGKIGLLK 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG S+ V ++YKLP E+ LVI+DD+DL G RL+ G GHNG+KSI
Sbjct: 75 PLTYMNRSGHSVQAVRSWYKLPP-ESVLVIYDDMDLPLGKTRLRLSGSAGGHNGMKSIIS 133
Query: 121 KC-GKNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+N+ RL+IGIG+P D + HVLG FS+ E + +++ + + L K
Sbjct: 134 HLSSQNFPRLKIGIGKPKGAANEDNTDTVSHVLGRFSATETKLMTLVLEFVIECVELTLK 193
Query: 175 REDVSFLNHIVS 186
+ +N S
Sbjct: 194 QGVEKAMNCCNS 205
>gi|259047961|ref|ZP_05738362.1| aminoacyl-tRNA hydrolase [Granulicatella adiacens ATCC 49175]
gi|259035381|gb|EEW36636.1| aminoacyl-tRNA hydrolase [Granulicatella adiacens ATCC 49175]
Length = 203
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHN+GFM +D + F K F A ++GQ+ G + I +K
Sbjct: 18 MKLVVGLGNPGAKYKGTRHNVGFMTMDEVAYQEKFDFDKALFDAVFAQGQMGGEKVIFMK 77
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ +MN+YK+ +E+ LV++DD+DL G +RL+ G GHNG+KSI
Sbjct: 78 PLTFMNLSGEAIRPLMNYYKI-GIEDLLVVYDDMDLPVGKIRLRQKGSAGGHNGMKSIIS 136
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED-V 178
G + R+++G+GRP + ++ HVL F E ++ + ++ +D V
Sbjct: 137 CLGTSEFNRIKVGVGRPKEGRTVVGHVLNRFEKEEEEDIIFAVQKSVDAIRSWIDTDDFV 196
Query: 179 SFLNHIV 185
+N
Sbjct: 197 KTMNQFN 203
>gi|242241587|ref|ZP_04796032.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis W23144]
gi|242234968|gb|EES37279.1| peptidyl-tRNA hydrolase [Staphylococcus epidermidis W23144]
Length = 190
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF +D I H F K+KF + +L+G + I I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVVDDILERHQFTLDKQKFKGAYTIERLNGEKVIFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSGQ++ +M++Y + ++E+ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGQAVAPLMDYYNV-DVEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + +KR+RIG+GRP + + +VL FS E + +I++ A+++ +
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMSVPDYVLQKFSKEEMIIMEKVIEHSAKAVESFIESSRFD 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 HVMNEFN 186
>gi|319408910|emb|CBI82567.1| Peptidyl-tRNA hydrolase [Bartonella schoenbuchensis R1]
Length = 194
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 92/182 (50%), Positives = 125/182 (68%), Gaps = 1/182 (0%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++AGLGNPG Y NRHNIGFM +D IH F W KKF AEIS G ++G + +LIKPQ
Sbjct: 2 LIAGLGNPGLSYQNNRHNIGFMAVDAIHKSFSFSPWSKKFQAEISNGLINGEKILLIKPQ 61
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSGQ++ + + FYKL L N++V +D+LDL G +R+K GGG GHNG+KSI C
Sbjct: 62 TFMNLSGQAISQTLRFYKL-ELNNFIVFYDELDLPPGKVRVKIGGGSGGHNGIKSIDSHC 120
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
G NY R+R+GIG P + +HVLGNF+ ++ +L ++D IA ++ +L K + F+N
Sbjct: 121 GNNYCRVRLGIGHPGSKELVHQHVLGNFTKSDQEWLPTLLDIIADNIAILIKGDANQFMN 180
Query: 183 HI 184
I
Sbjct: 181 KI 182
>gi|307324317|ref|ZP_07603525.1| peptidyl-tRNA hydrolase [Streptomyces violaceusniger Tu 4113]
gi|306890048|gb|EFN21026.1| peptidyl-tRNA hydrolase [Streptomyces violaceusniger Tu 4113]
Length = 196
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 77/190 (40%), Positives = 109/190 (57%), Gaps = 6/190 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD-----GLRT 56
++V GLGNPG EY NRHN+GFM D + K A++ EG++ R
Sbjct: 8 WLVVGLGNPGGEYVGNRHNVGFMVADLLAGRMGARFKAHKSRAQVVEGRVGPPGPSSRRV 67
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
++ KP +FMNLSG + + +FYK+P + + + +HD+LD+D+G LRLK GGGD GHNGLK
Sbjct: 68 VVAKPMSFMNLSGGPVTALRDFYKVP-VGHVVAVHDELDIDYGALRLKVGGGDNGHNGLK 126
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
SI++ G +Y R+R GIGRPP + VL +FS+ ER L +D A ++ L
Sbjct: 127 SITKSLGADYCRVRFGIGRPPGRMDVAAFVLKDFSAAERKELDYFVDRAADAVETLIADG 186
Query: 177 DVSFLNHIVS 186
S
Sbjct: 187 LERAQGTYNS 196
>gi|296284046|ref|ZP_06862044.1| peptidyl-tRNA hydrolase [Citromicrobium bathyomarinum JL354]
Length = 189
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 78/185 (42%), Positives = 111/185 (60%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I GLGNPG Y +RHNIGFM D I H F +KKF + EG++ + +L+K
Sbjct: 1 MQIWTGLGNPGPRYALHRHNIGFMACDVIAETHDFGPVQKKFQGWVQEGRIGNQKILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E + FYKL E V HD+LDL ++++ GGG AGHNGL+SI++
Sbjct: 61 PATFMNESGRAVAEALRFYKLEP-EALTVFHDELDLAPFKVKVRMGGGLAGHNGLRSINQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++R+RIGIG P + HVLGN++ E L ++ +A LA +D F
Sbjct: 120 HLGPDFRRVRIGIGHPGHKDRVTGHVLGNYAKAEMDDLATMLGAMASEAHWLADGDDARF 179
Query: 181 LNHIV 185
+N +
Sbjct: 180 MNDVA 184
>gi|239637488|ref|ZP_04678462.1| peptidyl-tRNA hydrolase [Staphylococcus warneri L37603]
gi|239596933|gb|EEQ79456.1| peptidyl-tRNA hydrolase [Staphylococcus warneri L37603]
Length = 190
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF ID I H F K+KF + +++G + +LI+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVIDYILERHRFTLDKQKFKGAYTIERMNGDKVLLIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + ++++ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVAPLMDYYNV-DVDDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + +KR+RIG+GRP + + +VL FS E + +I++ A ++ +
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMSVPDYVLQRFSKEEMITMEKVIEHSANAVESFIETSRFD 179
Query: 179 SFLNHIV 185
+ +N
Sbjct: 180 NVMNEYN 186
>gi|317120948|ref|YP_004100951.1| peptidyl-tRNA hydrolase [Thermaerobacter marianensis DSM 12885]
gi|315590928|gb|ADU50224.1| peptidyl-tRNA hydrolase [Thermaerobacter marianensis DSM 12885]
Length = 220
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 64/184 (34%), Positives = 97/184 (52%), Gaps = 2/184 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
I+ GLGNPG EY RHN+GF +D + W++ F + +EG G L+KPQ
Sbjct: 4 IIVGLGNPGPEYEGTRHNVGFAVVDALARRLRTAGWRRGFASLWAEGSWRGQPVALLKPQ 63
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG+++ + +++P E LV++DDLDL G LRL+ G GH G+ SI
Sbjct: 64 TYMNASGEAVQQACRAWRVPPAE-VLVVYDDLDLPPGHLRLRPRGSAGGHRGVASIIAAL 122
Query: 123 -GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G+++ RLRIGIGRPP +VL F E+ + + A ++ + +
Sbjct: 123 GGEDFPRLRIGIGRPPAGVDAAEYVLAPFDPAEQPLMEAAVQRAAEAVLAVLATGLQLAM 182
Query: 182 NHIV 185
+
Sbjct: 183 SRYN 186
>gi|317048563|ref|YP_004116211.1| peptidyl-tRNA hydrolase [Pantoea sp. At-9b]
gi|316950180|gb|ADU69655.1| peptidyl-tRNA hydrolase [Pantoea sp. At-9b]
Length = 195
Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + + + KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAATRHNAGAWYVDLLAERNNQSLKDEPKFFGYTARLSLAGEDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVAAMATFYRIAP-EEILVAHDELDLPPGVAKFKQGGGHGGHNGLKDIIS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D + VLG + E+ + +D R L K + +
Sbjct: 124 KLGNNNNFHRLRVGIGHPGDRNKVTGFVLGKPPASEQKLIDDAVDEAVRCTELWLKEDKI 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 KAMNRLHAFK 193
>gi|291545189|emb|CBL18298.1| peptidyl-tRNA hydrolase [Ruminococcus sp. 18P13]
Length = 206
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY + RHN GFM +D + + KF + + + G R +L+KP
Sbjct: 21 YLIVGLGNPGLEYAQTRHNAGFMTLDLLAEREHTEIKRMKFKSLCGDAVIAGKRCLLMKP 80
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ E M FYKLP +++ +V++DD+ L+ LR++ G D GHNG+KSI
Sbjct: 81 TTYMNNSGQAVAEAMQFYKLP-IDHIIVVYDDISLEPSRLRIRRKGSDGGHNGIKSIIYL 139
Query: 122 CGKN-YKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G++ + R+++G+G+ P ++ VL F+ E + ++ S+ L+ +
Sbjct: 140 TGEDTFPRIKLGVGKKPRPDYNLADWVLSRFTKEELEQMHIAAEHACESIALMVNGKIDE 199
Query: 180 FLNHIVS 186
+N +
Sbjct: 200 AMNRYNA 206
>gi|89069014|ref|ZP_01156395.1| peptidyl-tRNA hydrolase [Oceanicola granulosus HTCC2516]
gi|89045383|gb|EAR51448.1| peptidyl-tRNA hydrolase [Oceanicola granulosus HTCC2516]
Length = 230
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 84/185 (45%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y RHNIGFM +D+I S H FP+++ KF E+SEG+L G R +L+K
Sbjct: 1 MKLFVGLGNPGPKYARTRHNIGFMAVDQIASDHGFPSFRAKFQGELSEGRLGGERVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E M FYKL + + V HD++DL G +RLK GGG AGHNGL+SI +
Sbjct: 61 PMTFMNLSGQSVGEAMRFYKLEST-DVTVFHDEIDLAPGKVRLKAGGGHAGHNGLRSIHQ 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R+G+G P + +VL +F + +L ++ I LA+ + F
Sbjct: 120 HIGPHYDRVRLGVGHPGRKEAVPGYVLHDFPKADEGWLDDVLRGIGDGAVALAEGDGARF 179
Query: 181 LNHIV 185
N +
Sbjct: 180 SNAVA 184
>gi|295838327|ref|ZP_06825260.1| aminoacyl-tRNA hydrolase [Streptomyces sp. SPB74]
gi|197695880|gb|EDY42813.1| aminoacyl-tRNA hydrolase [Streptomyces sp. SPB74]
Length = 200
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 80/191 (41%), Positives = 111/191 (58%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLD-----GLR 55
++VAGLGNPG EY NRHN+GFM D + + + + A++ EG+L R
Sbjct: 11 WLVAGLGNPGPEYAGNRHNVGFMVADLLAARLGGRFKRAARAQAQVVEGRLGVPGVSSTR 70
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
++ KP +FMNLSG + + +FYK+P LE + +HD+LD+D+G LRLK GGGD GHNGL
Sbjct: 71 VVIAKPLSFMNLSGGPVTALRDFYKVP-LERVVAVHDELDVDYGVLRLKLGGGDNGHNGL 129
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 130 KSMTKAMGPGYHRVRFGIGRPPGRTQVADFVLRDFSSAERKELDYFVDRAADAVEALVTE 189
Query: 176 EDVSFLNHIVS 186
S
Sbjct: 190 GLERAQGSYNS 200
>gi|146329537|ref|YP_001208995.1| peptidyl-tRNA hydrolase [Dichelobacter nodosus VCS1703A]
gi|172047324|sp|A5EWU9|PTH_DICNV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146233007|gb|ABQ13985.1| peptidyl-tRNA hydrolase [Dichelobacter nodosus VCS1703A]
Length = 189
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 3/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILI 59
+ ++ GLGNPG +Y + RHN GF +D+ + +KKF AE E ++ + L+
Sbjct: 2 LKLIVGLGNPGEQYQKTRHNAGFWLLDQTAQDYSCRLRTEKKFFAEFGEIAINQQKIFLL 61
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQTFMN SG+SL V FY + + L+IHD+LDL G ++LK GG GHNGL+ I
Sbjct: 62 KPQTFMNASGKSLAAVCRFYHIEP-QQILIIHDELDLPEGKIKLKKSGGHGGHNGLRDII 120
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+++ RLRIGIGRP ++ +I +VL S+ L + +++ L D
Sbjct: 121 AALASQDFYRLRIGIGRPENSTQVIDYVLKAPSATHMERLNESLSYGKKAIEKLITEGDE 180
Query: 179 SFLNHIVSV 187
++ + S+
Sbjct: 181 KAMHWLHSL 189
>gi|152990134|ref|YP_001355856.1| peptidyl-tRNA hydrolase [Nitratiruptor sp. SB155-2]
gi|151421995|dbj|BAF69499.1| peptidyl-tRNA hydrolase, PTH1 family [Nitratiruptor sp. SB155-2]
Length = 188
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 107/175 (61%), Gaps = 6/175 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG +Y NRHNIGFM +DR+ KK+F E+ + +L+
Sbjct: 1 MHLIVGLGNPGPKYERNRHNIGFMVVDRLIERLKPTSISKKEFKGELYKY----GSILLL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSGQS+ V NFYK+ LEN +VIHDDLDL G LR K GG GHNGLKSI
Sbjct: 57 KPLTYMNLSGQSVQAVKNFYKI-ELENIIVIHDDLDLGLGALRFKKGGSSGGHNGLKSID 115
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
GK Y R+R GIGRP ++R+VL +F+ E + P+ID A + L K
Sbjct: 116 ALVGKEYIRIRFGIGRPQRKEEVVRYVLSDFTQKEFECIAPVIDKAAEAALALTK 170
>gi|108801218|ref|YP_641415.1| peptidyl-tRNA hydrolase [Mycobacterium sp. MCS]
gi|119870369|ref|YP_940321.1| peptidyl-tRNA hydrolase [Mycobacterium sp. KMS]
gi|126437198|ref|YP_001072889.1| peptidyl-tRNA hydrolase [Mycobacterium sp. JLS]
gi|119390965|sp|Q1B425|PTH_MYCSS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229423|sp|A3Q5H1|PTH_MYCSJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229424|sp|A1UL23|PTH_MYCSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|108771637|gb|ABG10359.1| peptidyl-tRNA hydrolase [Mycobacterium sp. MCS]
gi|119696458|gb|ABL93531.1| peptidyl-tRNA hydrolase [Mycobacterium sp. KMS]
gi|126236998|gb|ABO00399.1| peptidyl-tRNA hydrolase [Mycobacterium sp. JLS]
Length = 192
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG Y + RHN+GF+ D + +K A+I+ G+L G +L K
Sbjct: 5 LLVVGLGNPGPNYAKTRHNVGFVVADLLAGRIGSGFKAHRKSGADIATGRLAGRAVVLAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MN SG+++ + FY + + +VIHD+LD+DFG +RLK GGG AGHNGLKS++
Sbjct: 65 PRTYMNESGRNVGPLAKFYSVAPA-DVIVIHDELDIDFGRIRLKFGGGVAGHNGLKSVAA 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K+++R+R+G+GRPP +VL F+S ER + I + A + LL +
Sbjct: 124 ALGTKDFQRVRVGVGRPPGRKDAATYVLEPFTSVERPEVPTICEQAADATELLIAQGLEP 183
Query: 180 FLNHIVS 186
N + +
Sbjct: 184 AQNLVHA 190
>gi|167747444|ref|ZP_02419571.1| hypothetical protein ANACAC_02164 [Anaerostipes caccae DSM 14662]
gi|317471173|ref|ZP_07930544.1| peptidyl-tRNA hydrolase [Anaerostipes sp. 3_2_56FAA]
gi|167652806|gb|EDR96935.1| hypothetical protein ANACAC_02164 [Anaerostipes caccae DSM 14662]
gi|316901388|gb|EFV23331.1| peptidyl-tRNA hydrolase [Anaerostipes sp. 3_2_56FAA]
Length = 190
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 74/186 (39%), Positives = 106/186 (56%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF ID I + KK A I G L G + +L+K
Sbjct: 1 MKVIVGLGNPGRQYERTRHNIGFAAIDYIAGKNQIEISSKKHKALIGSGYLGGQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+SL VM+FYKL +++VI DD+ LD G LR++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGESLRGVMDFYKLEP-SDFIVIFDDISLDVGQLRIRRKGSAGGHNGIKSIIS 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ R++IG+G P + +VLG+FS E + ++ ++ L+ +
Sbjct: 120 HLGSMDFPRIKIGVGEKPKGYDLADYVLGHFSKGEIEIYDDVFPDVDDAVKLMVMDDISG 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNQYN 185
>gi|311108747|ref|YP_003981600.1| peptidyl-tRNA hydrolase [Achromobacter xylosoxidans A8]
gi|310763436|gb|ADP18885.1| peptidyl-tRNA hydrolase [Achromobacter xylosoxidans A8]
Length = 198
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 96/189 (50%), Gaps = 6/189 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GF D + +K F +++ +L +L+KP
Sbjct: 7 LIVGLGNPGPDYETTRHNAGFWLADHLADDLRASFALEKSFFGMVAKSRLGADNVLLLKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FYKL E LV+HD+LDL G ++LK GGG AGHNGLK I
Sbjct: 67 NTYMNRSGQAVGALARFYKLTP-EQVLVLHDELDLMPGQVKLKQGGGHAGHNGLKDIQAA 125
Query: 122 CG-KNYKRLRIGIGRP---PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G N+ RLRIGIG P + VL E+ + +ID +P + +
Sbjct: 126 LGSPNFWRLRIGIGHPRTLGLAQQVADFVLHPPRREEQKEIEAVIDRCRAVVPAMLAGDF 185
Query: 178 VSFLNHIVS 186
+ S
Sbjct: 186 PLATRQLHS 194
>gi|260219881|emb|CBA26856.1| Peptidyl-tRNA hydrolase [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 227
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 98/187 (52%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG EY RHN GF +D + A + +H ++ + G L++
Sbjct: 3 KLFVGLGNPGPEYDGTRHNAGFWWVDALARELKVNLAMDRGYHGLLARTSIKGETVWLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ + F+K+ E LV HD+LD+ G +LK GG AGHNGL+ I
Sbjct: 63 PQTFMNLSGKSVGALARFFKIKP-EEILVAHDELDVVPGEAKLKFGGSHAGHNGLRDIHA 121
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLR+G+G P + ++ VL S R + ID ++LP L E
Sbjct: 122 QLGTGDYWRLRLGVGHPGVKSEVVHWVLKKPSLDHRIAIDQSIDRSLKALPHLLASEMDK 181
Query: 180 FLNHIVS 186
I +
Sbjct: 182 ATMLIHT 188
>gi|307823426|ref|ZP_07653655.1| peptidyl-tRNA hydrolase [Methylobacter tundripaludum SV96]
gi|307735411|gb|EFO06259.1| peptidyl-tRNA hydrolase [Methylobacter tundripaludum SV96]
Length = 189
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 72/187 (38%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN GF+ +DR+ S + +F ++E G + +L+K
Sbjct: 3 KLIVGLGNPGRQYEKTRHNAGFLFLDRLVSDSNCDWVRESRFDGLLAEIGGAGGKVLLLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ + +V +YKL E LV+HD+LD D G ++LK GG AGHNGL+ I
Sbjct: 63 PGTFMNRSGQVVGKVARYYKLAPDE-ILVVHDELDFDVGVVKLKKDGGHAGHNGLRDIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K + RLRIGIGRPP + VL S E + D A + + + +
Sbjct: 122 HLGAKEFYRLRIGIGRPPAGEAVADFVLSGPSKSEWILMSSAFDLAASYVDQVITGDMAA 181
Query: 180 FLNHIVS 186
+N + S
Sbjct: 182 VMNKLNS 188
>gi|71064750|ref|YP_263477.1| peptidyl-tRNA hydrolase [Psychrobacter arcticus 273-4]
gi|119390984|sp|Q4FVB5|PTH_PSYA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71037735|gb|AAZ18043.1| peptidyl-tRNA hydrolase [Psychrobacter arcticus 273-4]
Length = 193
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 67/188 (35%), Positives = 101/188 (53%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF + + A KKFH GQ+ G L+
Sbjct: 4 KLIVGLGNPGQEYMFTRHNAGFWFVHHLAQQFNIALAPDKKFHGVTGRGQIHGSDVRLLM 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQS++ ++ FY + + + L+ HD+LD+ G+++LKT GG GHNGL+ I+
Sbjct: 64 PLTFMNKSGQSVVPMVKFYGI-DNDELLIAHDELDIPAGSIKLKTDGGHGGHNGLRDITP 122
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ RLR+GIG P + + HVL + E+ + + +LPLL +
Sbjct: 123 HIGNDFHRLRVGIGHPGHKSKVSGHVLSKAAPDEQIAIDSALSAAFEALPLLLDGDIEKA 182
Query: 181 LNHIVSVR 188
+ I +
Sbjct: 183 RSQINGFK 190
>gi|262373269|ref|ZP_06066548.1| peptidyl-tRNA hydrolase [Acinetobacter junii SH205]
gi|262313294|gb|EEY94379.1| peptidyl-tRNA hydrolase [Acinetobacter junii SH205]
Length = 193
Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++++ + + KFH GQ++G L+ P
Sbjct: 6 LIVGLGNPGKEYAQTRHNAGFWFVEQLADRYGISLKAEPKFHGFTGRGQIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS++ FY++ E L+ HD+LD+D G +RLKTGGG GHNGL+ I
Sbjct: 66 TTFMNRSGQSVVPFAKFYQVTP-EAILIAHDELDMDPGIIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG S E+ + ID+ + +L + +
Sbjct: 125 IGPNFHRLRIGIGHPGSKERVSGHVLGKAPSSEQDLMDAAIDHALSKVKMLVDGQVSQAM 184
Query: 182 NHIVSVR 188
N I + +
Sbjct: 185 NQINAYK 191
>gi|167751279|ref|ZP_02423406.1| hypothetical protein EUBSIR_02265 [Eubacterium siraeum DSM 15702]
gi|167655786|gb|EDR99915.1| hypothetical protein EUBSIR_02265 [Eubacterium siraeum DSM 15702]
gi|291556782|emb|CBL33899.1| peptidyl-tRNA hydrolase [Eubacterium siraeum V10Sc8a]
Length = 209
Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN GFM D + K KF + I++ ++G I++KP
Sbjct: 24 YLIVGLGNPGTQYENTRHNAGFMAADTLAEKLGVQIKKLKFKSLIADCAIEGRHCIIMKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ E MNFYK+P +N LV++DD+ LD G R++ G D GHNG+KSI
Sbjct: 84 STFMNNSGEAVGEAMNFYKIPP-QNILVMYDDISLDVGRTRIRRKGSDGGHNGIKSIILH 142
Query: 122 CGKN-YKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R++IG+G P + VL F + L +DN A + L+ +
Sbjct: 143 TNSDAFPRIKIGVGAKPHPDFPLADWVLSGFKKEDGENLEKALDNAAEAARLIVAGKIDM 202
Query: 180 FLNHIVS 186
+N S
Sbjct: 203 AMNKYSS 209
>gi|304440476|ref|ZP_07400364.1| aminoacyl-tRNA hydrolase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371042|gb|EFM24660.1| aminoacyl-tRNA hydrolase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 190
Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats.
Identities = 74/187 (39%), Positives = 109/187 (58%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHNIGF+ IDR+ + KF + I E ++G + IL+K
Sbjct: 1 MFVIVGLGNPGSKYELTRHNIGFLTIDRLAKREGARVDRIKFKSLIGEININGEKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+++ EVMNFYK+ +L+N LV+ DD+D+ TLRLK G HNG+KSI
Sbjct: 61 PQTFMNLSGEAVREVMNFYKV-DLKNLLVVVDDIDITPFTLRLKKSGSAGSHNGMKSIIY 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RL++G+G + +VL F ++ L IID ++ K
Sbjct: 120 NLNDDKFPRLKVGVGNNERKIDLANYVLSGFEKKDQEKLENIIDASCDAILDFIKHGADY 179
Query: 180 FLNHIVS 186
+N+ +
Sbjct: 180 VMNNYNN 186
>gi|229829773|ref|ZP_04455842.1| hypothetical protein GCWU000342_01870 [Shuttleworthia satelles DSM
14600]
gi|229791762|gb|EEP27876.1| hypothetical protein GCWU000342_01870 [Shuttleworthia satelles DSM
14600]
Length = 212
Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats.
Identities = 72/189 (38%), Positives = 113/189 (59%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y +RHN GF IDR+ + + KF A +G ++G + +L+K
Sbjct: 13 MYMIAGLGNPGEKYRHSRHNAGFDTIDRLADQYGICLREMKFEALYGKGLIEGRQVLLVK 72
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+SL + + FY+L LE+ LVI DD+ LD G +R++ G GHNGLKSI
Sbjct: 73 PTTYMNDSGRSLQQFVRFYQLDPLEDMLVISDDVTLDCGVIRVRKQGSAGGHNGLKSIIA 132
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+G+G+ P +I HVLG ER + ++ A + ++ + + V
Sbjct: 133 CLGTDCFPRVRVGVGKVPTGGDMIAHVLGRIRPEERENMALGEEHAAEAAVMVMEGQIVE 192
Query: 180 FLNHIVSVR 188
+N +R
Sbjct: 193 AMNRYNGMR 201
>gi|164688874|ref|ZP_02212902.1| hypothetical protein CLOBAR_02522 [Clostridium bartlettii DSM
16795]
gi|164602078|gb|EDQ95543.1| hypothetical protein CLOBAR_02522 [Clostridium bartlettii DSM
16795]
Length = 183
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 65/181 (35%), Positives = 104/181 (57%), Gaps = 2/181 (1%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFM 65
GLGNPG +Y + RHN+GF ID + + K K A I EG++ + IL+KP T+M
Sbjct: 2 GLGNPGDKYEKTRHNVGFNVIDLLAKEYSIDVSKIKHKALIGEGRVGTEKVILVKPMTYM 61
Query: 66 NLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN 125
NLSG+S+ ++ N+Y + +LEN +VI+DD+DLD G +R++ G HNG++SI + G N
Sbjct: 62 NLSGESVADICNYYNI-DLENLIVIYDDIDLDVGKIRIRKKGSGGTHNGMRSIIKCLGSN 120
Query: 126 -YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHI 184
+ R+R+GI +P + + VL FS + L +N ++ + + +N
Sbjct: 121 EFPRVRVGISKPKNGQDLADFVLSRFSKEDEKSLQESFENSVAAVDCAIRNDLDLAMNRY 180
Query: 185 V 185
Sbjct: 181 N 181
>gi|291541699|emb|CBL14809.1| peptidyl-tRNA hydrolase [Ruminococcus bromii L2-63]
Length = 197
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 69/183 (37%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+IV GLGNP +Y RHN G++ IDRI K K+ + I ++G + +L+KP
Sbjct: 13 YIVVGLGNPDRKYENTRHNAGWLAIDRIADKLGCDVNKIKYKSFIGTCTVNGAKVMLMKP 72
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ+++E MNFYK+P EN +VI DD+ LD G +R+++ G D G G++SI
Sbjct: 73 TTYMNNSGQAVVEAMNFYKIPP-ENVIVIFDDISLDVGKMRIRSKGSDGGQRGMRSIIYL 131
Query: 122 CGKN-YKRLRIGIG-RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++GIG +P + VL F+S E L I DN +++ L+ +
Sbjct: 132 SGSDKFPRIKVGIGAKPNPDWDLADWVLSKFTSDEMKKLDEIFDNAEKAIELIIDGKTDR 191
Query: 180 FLN 182
+N
Sbjct: 192 AMN 194
>gi|238751555|ref|ZP_04613046.1| Peptidyl-tRNA hydrolase [Yersinia rohdei ATCC 43380]
gi|238710273|gb|EEQ02500.1| Peptidyl-tRNA hydrolase [Yersinia rohdei ATCC 43380]
Length = 196
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEESKFFGYTARLNLAGQDIRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E LV HD+LD+ G ++K GGG+ GHNGLK I
Sbjct: 65 PSTFMNLSGKAVAAMAGFYRILP-EEILVAHDELDIPPGVAKMKLGGGNGGHNGLKDIQS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + + VLG + E+ + ID R +L
Sbjct: 124 KLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQALIDDTIDESIRCTEILLTEGIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|317057761|ref|YP_004106228.1| peptidyl-tRNA hydrolase [Ruminococcus albus 7]
gi|315450030|gb|ADU23594.1| peptidyl-tRNA hydrolase [Ruminococcus albus 7]
Length = 208
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+ GLGNPG +Y RHN GF+ I+ + F + KF A++ + G +++KP
Sbjct: 23 YIIVGLGNPGIQYEGTRHNAGFITIEALEKKLGFSCDRHKFKAKVGNTVIGGKSCLVMKP 82
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+TFMNLSG ++ E M+FYK+P LEN +VI DD+ LD G +R++ G GHNG+KSI +
Sbjct: 83 ETFMNLSGDAVSEAMDFYKIP-LENVIVIFDDISLDVGHMRIRRKGSAGGHNGIKSIIAQ 141
Query: 122 C-GKNYKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C G+++ R+++G+G+ P+ A + + VL F + L D +L L+ + +
Sbjct: 142 CGGEDFPRIKLGVGKKPNPAYDLAKWVLSKFGDEDMEKLGNAADKACDALELMVQGKIDE 201
Query: 180 FLNHIVS 186
+N +
Sbjct: 202 AMNKYNA 208
>gi|15807362|ref|NP_296093.1| peptidyl-tRNA hydrolase [Deinococcus radiodurans R1]
gi|14195089|sp|Q9RRW3|PTH_DEIRA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|6460187|gb|AAF11918.1|AE002068_1 peptidyl-tRNA hydrolase [Deinococcus radiodurans R1]
Length = 215
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 101/189 (53%), Gaps = 6/189 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD---GLRTI 57
M ++ GLGNPG +Y + RHN+G++ +D + W+K AE+ E +L G + +
Sbjct: 1 MKLIVGLGNPGEKYAQTRHNVGWLVVDELARRAGGS-WRKDGEAEVCEVRLGTAPGEKVL 59
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KPQTFMN SG+++ +M+FYKL E LV+ DDLD FG LR + GG G NG++
Sbjct: 60 LVKPQTFMNTSGKAVWPLMSFYKL-EGEQLLVVQDDLDSPFGLLRFRLGGRHGGQNGVRD 118
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
I + G + + RL+IGI RPP VL + ER L ++ + L A +
Sbjct: 119 IIARLGYDRFPRLKIGISRPPAGRDPADWVLSKWRDEERETLAELVRLGVGAAELWAVQG 178
Query: 177 DVSFLNHIV 185
Sbjct: 179 LAEAQQMYN 187
>gi|282898185|ref|ZP_06306176.1| Peptidyl-tRNA hydrolase [Raphidiopsis brookii D9]
gi|281196716|gb|EFA71621.1| Peptidyl-tRNA hydrolase [Raphidiopsis brookii D9]
Length = 213
Score = 234 bits (599), Expect = 3e-60, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 105/195 (53%), Gaps = 12/195 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEG-QLDGLRTILIK 60
++ GLGNP +Y + RHNIGF ID + P + +KF + EG L + ++K
Sbjct: 15 LIVGLGNPDPKYDQTRHNIGFAAIDALSRNWHIPVTENRKFQGQFGEGLALGSKKIRILK 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ V ++YKLP E+ LVI+DD+DL G RL+ G GHNG+KS
Sbjct: 75 PLTYMNRSGESIQAVTSWYKLPP-ESVLVIYDDMDLPLGKTRLRLSGSAGGHNGMKSTIS 133
Query: 121 KCG-KNYKRLRIGIGRPP--------DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
+N+ RLRIGIG+P D + HVLG FS E + PI+ + + L
Sbjct: 134 HLNSQNFPRLRIGIGKPKNLPNNSNNDDGGTVSHVLGKFSPQEAKLIDPILAFVVECVEL 193
Query: 172 LAKREDVSFLNHIVS 186
K+ +N S
Sbjct: 194 TLKQGVEKAMNRCNS 208
>gi|331003612|ref|ZP_08327108.1| peptidyl-tRNA hydrolase [Lachnospiraceae oral taxon 107 str. F0167]
gi|330412332|gb|EGG91724.1| peptidyl-tRNA hydrolase [Lachnospiraceae oral taxon 107 str. F0167]
Length = 211
Score = 234 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 53/189 (28%), Positives = 107/189 (56%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF ++++ ++K+ + ++ + I+++
Sbjct: 22 MKLIVGLGNPGREYVNTRHNAGFYVVEKLAYELGEDISERKYKGVFTRVRIGNEKAIILE 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ M+++K+ + + +VI+DD++L+ G LR++ G GHNG+KS+
Sbjct: 82 PLTYMNNSGESVRAFMDYFKI-DASDVIVIYDDINLEPGNLRIRLKGSAGGHNGIKSLIA 140
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ R+++G+G P + HVLG F+ ++ L + ++ L+ + + +
Sbjct: 141 HMGTSDFPRIKVGVGEKPAKMDLADHVLGRFNDTDKKLLDEAASDAIEAIKLMVEDQYDT 200
Query: 180 FLNHIVSVR 188
+N + +
Sbjct: 201 AMNRYNTKK 209
>gi|158522829|ref|YP_001530699.1| aminoacyl-tRNA hydrolase [Desulfococcus oleovorans Hxd3]
gi|158511655|gb|ABW68622.1| Aminoacyl-tRNA hydrolase [Desulfococcus oleovorans Hxd3]
Length = 193
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 73/188 (38%), Positives = 107/188 (56%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG +Y RHNIGFM IDR+ F + K G ++G R + +KP
Sbjct: 7 YLLAGLGNPGSDYARTRHNIGFMVIDRLAERFSFAIDRTKGSCLYGTGGIEGQRVVAVKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q FMN SG L + + K+ + + LV+HDD+DL FG L++KT GG GHNG+KSI +
Sbjct: 67 QGFMNSSGPPLFRLAQYLKI-SSKRMLVVHDDIDLAFGKLKIKTKGGHGGHNGIKSIIDT 125
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ R+RIGI P ++ HVLG FS+ E L +I ++ + K +
Sbjct: 126 FGTDDFVRVRIGIDHPGAREGVVGHVLGRFSAEELEHLDGLIQQAGETVTAILKEGATAA 185
Query: 181 LNHIVSVR 188
+N + R
Sbjct: 186 MNRLHGAR 193
>gi|34581436|ref|ZP_00142916.1| peptidyl-tRNA hydrolase [Rickettsia sibirica 246]
gi|28262821|gb|EAA26325.1| peptidyl-tRNA hydrolase [Rickettsia sibirica 246]
Length = 185
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 82/186 (44%), Positives = 117/186 (62%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHN+GF+ I++I + + + KKKF+ EI+E DG + I I
Sbjct: 1 MLLVIGLGNPGKEYQYTRHNVGFIAIEKIANQYNSSFSTKKKFNCEIAETISDGQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + + VIHDD+DL+ G ++ KTG G+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNIYPAK-IFVIHDDIDLETGRIKFKTGDGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+RIG+GRP + + +VL +FS PE ++ ID I + L+ + +
Sbjct: 120 GVIGNNYNRIRIGVGRPQNNQDVADYVLNHFSKPEYETVMQAIDRITSNFGLILENKLEE 179
Query: 180 FLNHIV 185
F N I
Sbjct: 180 FKNKIA 185
>gi|313902508|ref|ZP_07835909.1| peptidyl-tRNA hydrolase [Thermaerobacter subterraneus DSM 13965]
gi|313467194|gb|EFR62707.1| peptidyl-tRNA hydrolase [Thermaerobacter subterraneus DSM 13965]
Length = 208
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 64/157 (40%), Positives = 92/157 (58%), Gaps = 2/157 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
I+ GLGNPG EY RHN+GF +D + W++ F + +EG G +L+KPQ
Sbjct: 4 IIVGLGNPGPEYEGTRHNVGFAVVDALARRLRTAGWRRGFRSLWAEGTWRGQPVVLLKPQ 63
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG+++ + ++P E LVI+DDLDL G LRL+ G GH G+ SI
Sbjct: 64 TYMNLSGEAVAQACRNLRVPPGE-VLVIYDDLDLPPGHLRLRPRGSAGGHRGVASIIASL 122
Query: 123 GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
G+ ++ RLR+GIGRPP +VL F+ E+ +
Sbjct: 123 GRDDFPRLRVGIGRPPAGVDAADYVLAPFAPAEQPLM 159
>gi|271969794|ref|YP_003343990.1| aminoacyl-tRNA hydrolase [Streptosporangium roseum DSM 43021]
gi|270512969|gb|ACZ91247.1| Aminoacyl-tRNA hydrolase [Streptosporangium roseum DSM 43021]
Length = 201
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 75/186 (40%), Positives = 107/186 (57%), Gaps = 2/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG EY NRHN GFM +D + + + AE+ EG+L G +L KP
Sbjct: 7 WLVVGLGNPGPEYAGNRHNAGFMVLDELAARAGGRFKVHRSRAEVLEGRLAGAPAVLAKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+FMNLSG + + +FYK+ + + +HD+LD+ +G LR K GGGD GHNGLKSI++
Sbjct: 67 LSFMNLSGGPVKALADFYKV-DPARVIAVHDELDIPYGALRAKLGGGDNGHNGLKSITKS 125
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
K+Y R+R GIGRPP +VL +F++ ER L ++D A + L
Sbjct: 126 LATKDYLRVRFGIGRPPGRMDAAAYVLRDFATAERKDLPFLVDRAADMVESLITSGLEPT 185
Query: 181 LNHIVS 186
N +
Sbjct: 186 QNTFHA 191
>gi|172036669|ref|YP_001803170.1| peptidyl-tRNA hydrolase [Cyanothece sp. ATCC 51142]
gi|171698123|gb|ACB51104.1| peptidyl-tRNA hydrolase [Cyanothece sp. ATCC 51142]
Length = 204
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 66/188 (35%), Positives = 101/188 (53%), Gaps = 4/188 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDG-LRTILI 59
++ GLGNP +Y + RHNIGF +D + + ++F I+EG + L+
Sbjct: 13 KLIVGLGNPEPKYDKTRHNIGFEIVDILAETWGLSWKENRRFQGLIAEGNSPTYQKIYLL 72
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SGQS+ V ++YKL + LVI+DD+DL G +R++ G GHNG+KSI
Sbjct: 73 KPLTYMNRSGQSVRAVTDWYKLI-ATDVLVIYDDMDLPIGRMRMRLSGSAGGHNGMKSII 131
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G +N+ RLRIGIG+ + + HVLG F+ ER + + ++ K
Sbjct: 132 SHLGEQNFPRLRIGIGKSGQLDNTVSHVLGRFAPEERKIVDKTFPLVVDAIETSLKEGIE 191
Query: 179 SFLNHIVS 186
++ S
Sbjct: 192 KAMSLFNS 199
>gi|314937291|ref|ZP_07844633.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis subsp. hominis
C80]
gi|313654587|gb|EFS18337.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis subsp. hominis
C80]
Length = 190
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF ID I + F K+KF + +L+G + + I+
Sbjct: 1 MKCIVGLGNIGKRFERTRHNIGFEVIDYILDKNQFTLDKQKFKGAYTIERLNGDKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + +E+ +V++DD+DL G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVGPLMDYYNV-EVEDLIVLYDDMDLSQGNIRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + +KR+RIG+GRP + + +VL FS+ E + +I++ A+++ +
Sbjct: 120 HLGTDQFKRIRIGVGRPTNGMSVPDYVLQKFSNEEMMTMEKVIEHAAQAVEAFIETSRFD 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 HVMNEYN 186
>gi|304385534|ref|ZP_07367878.1| aminoacyl-tRNA hydrolase [Pediococcus acidilactici DSM 20284]
gi|304328038|gb|EFL95260.1| aminoacyl-tRNA hydrolase [Pediococcus acidilactici DSM 20284]
Length = 185
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY + RHN GFM +D + + +K A + E +G + +L+K
Sbjct: 1 MKMIVGLGNIGKEYDQTRHNTGFMVVDALAKKYGVDHFKIHHEAMVGEFFSNGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M++Y L L + +V++DD+D+ G +RL+ G GHNG+KS+
Sbjct: 61 PTTYMNDSGRAVRPLMDYYDLA-LTDLIVVYDDMDMPVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G ++RLR+GI P ++ +VLG F+ ++ + N +L E
Sbjct: 120 HLGTEKFRRLRVGIEHPAH-QKVVDYVLGRFTKEQKADFEIGVQNAIAALDDWLAGAEFS 178
Query: 179 SFLNHIV 185
+N
Sbjct: 179 QLMNQYN 185
>gi|313891661|ref|ZP_07825268.1| aminoacyl-tRNA hydrolase [Dialister microaerophilus UPII 345-E]
gi|313119939|gb|EFR43124.1| aminoacyl-tRNA hydrolase [Dialister microaerophilus UPII 345-E]
Length = 190
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY + RHNIGF ++ + WK ++EIS +G + I K
Sbjct: 1 MKLIVGLGNPGKEYEKTRHNIGFDVLELFSHRNKLSLWKNFMNSEISTVMNNGEKIIFAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++ +YK+ E+ VI DDLDL G +R++ G GHNGLKSI
Sbjct: 61 PQTYMNNSGESIGDIAKYYKIEP-EDIWVICDDLDLPVGKVRIRKKGSAGGHNGLKSIMA 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+N+ R R+GIG P + +I HVLG + + + +A S+ K
Sbjct: 120 HLQSENFCRFRVGIGHPKNGHTVIEHVLGRPYGEDIKKIEEAEEKVAESIEFALKENIDK 179
Query: 180 FLNHIVSVR 188
+N+ +
Sbjct: 180 AMNYFNDKK 188
>gi|160914797|ref|ZP_02077011.1| hypothetical protein EUBDOL_00804 [Eubacterium dolichum DSM 3991]
gi|158433337|gb|EDP11626.1| hypothetical protein EUBDOL_00804 [Eubacterium dolichum DSM 3991]
Length = 186
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 62/186 (33%), Positives = 101/186 (54%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF +D I +KKF A +++ ++ +L+K
Sbjct: 1 MKLIVGLGNPGKEYENTRHNSGFCVMDAIAKECNVEINQKKFKALVAQTRIGKESVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG++L++ +NFY + ++++ LVI+DDLDL G +RL+ G G NG+K+I +
Sbjct: 61 PQTYMNLSGEALIQAVNFYHI-DIKDILVIYDDLDLPVGKIRLREKGSAGGQNGMKNIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+R+GIG+ +I VLG E+ I + +
Sbjct: 120 HLHTQEFNRIRVGIGKDA-RVPVIDWVLGKIRKEEQEAYEQAIKQACDAAIYSCSHSFID 178
Query: 180 FLNHIV 185
++
Sbjct: 179 TMSAYN 184
>gi|114797549|ref|YP_760113.1| peptidyl-tRNA hydrolase [Hyphomonas neptunium ATCC 15444]
gi|119390950|sp|Q0C2D0|PTH_HYPNA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|114737723|gb|ABI75848.1| peptidyl-tRNA hydrolase [Hyphomonas neptunium ATCC 15444]
Length = 207
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 81/191 (42%), Positives = 123/191 (64%), Gaps = 5/191 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG----LRT 56
M I++G GNPG +Y +NRHN GF+ IDRIH + F W+ KF AEISEG ++ R
Sbjct: 1 MLILSGQGNPGAKYAKNRHNAGFLVIDRIHDAYGFGPWRTKFDAEISEGTVETANGRQRV 60
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+LIKPQTF N +G+S+ + + FYKL E+ V HD++DL G LR+K GGG +G+NG +
Sbjct: 61 LLIKPQTFYNETGRSVSKAVTFYKL-QPEDVTVFHDEIDLAPGRLRVKRGGGHSGNNGAR 119
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
S+ G+N++R+RIG+G P D A ++ HVL +F + + P+ + + ++LP L +
Sbjct: 120 SMMAHLGENFRRIRIGVGHPGDKAMVMPHVLSDFHKVDLEWFEPMTEAVCKALPFLLAGD 179
Query: 177 DVSFLNHIVSV 187
D F ++ +
Sbjct: 180 DERFQTEVMRL 190
>gi|228476232|ref|ZP_04060935.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis SK119]
gi|228269717|gb|EEK11216.1| aminoacyl-tRNA hydrolase [Staphylococcus hominis SK119]
Length = 190
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF ID I + F K+KF + +L+G + + I+
Sbjct: 1 MKCIVGLGNIGKRFERTRHNIGFEVIDYILDKNQFTLDKQKFKGAYTIERLNGDKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + +E+ +V++DD+DL G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVGPLMDYYNV-EVEDLIVLYDDMDLSQGHIRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + +KR+RIG+GRP + + +VL FS+ E + +I++ A+++ +
Sbjct: 120 HLGTDQFKRIRIGVGRPTNGMSVPDYVLQKFSNEEMMTMEKVIEHAAQAVEAFIETSRFD 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 HVMNEYN 186
>gi|302876605|ref|YP_003845238.1| peptidyl-tRNA hydrolase [Clostridium cellulovorans 743B]
gi|307687279|ref|ZP_07629725.1| peptidyl-tRNA hydrolase [Clostridium cellulovorans 743B]
gi|302579462|gb|ADL53474.1| peptidyl-tRNA hydrolase [Clostridium cellulovorans 743B]
Length = 188
Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats.
Identities = 71/188 (37%), Positives = 111/188 (59%), Gaps = 4/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGN G EY RHN+GF +D + + + KF EI EG ++ + IL+K
Sbjct: 1 MFVIFGLGNIGKEYESTRHNVGFEVVDILADKYNIQVNRVKFKGEIGEGFINNEKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + EVM+FYK+P EN +VI+DD+ LD G LR++ G GHNG+K+I
Sbjct: 61 PTTYMNLSGECVREVMDFYKIPK-ENLIVIYDDISLDVGKLRIRQKGSAGGHNGIKNILL 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G P ++I HVLG F E+ + + D A+ + + +
Sbjct: 120 HLGNDVFPRVKVGVGAP--KGNLINHVLGRFQKEEQETMNKVYDVAAQGVLDILNLGVLD 177
Query: 180 FLNHIVSV 187
+N +
Sbjct: 178 AMNKYNGI 185
>gi|125975113|ref|YP_001039023.1| peptidyl-tRNA hydrolase [Clostridium thermocellum ATCC 27405]
gi|125715338|gb|ABN53830.1| peptidyl-tRNA hydrolase [Clostridium thermocellum ATCC 27405]
Length = 196
Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 114/186 (61%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+F++ GLGNPG +Y RHN+GF ++ + H K K A I +G++ G + IL K
Sbjct: 11 LFVIVGLGNPGAKYENTRHNVGFDTVEFLSKRHDIRLGKLKHKALIGDGEIGGRKVILAK 70
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E++ +YK+P ++N ++I+DD+DL G LRL+ G HNG++S+
Sbjct: 71 PQTFMNLSGESVREIVEWYKIP-VKNIIIIYDDIDLPVGKLRLRPKGSAGTHNGMRSVIY 129
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + + R+RIGI +PP+ +I +VL FS+ ER + ++ A ++ + K S
Sbjct: 130 QLQSEEFPRIRIGIDKPPEGWDLISYVLSRFSADERKKIDEAVEKAADAVETILKSGIDS 189
Query: 180 FLNHIV 185
+N
Sbjct: 190 AMNKYN 195
>gi|187477048|ref|YP_785072.1| peptidyl-tRNA hydrolase [Bordetella avium 197N]
gi|119390914|sp|Q2KY99|PTH_BORA1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|115421634|emb|CAJ48144.1| peptidyl-tRNA hydrolase [Bordetella avium 197N]
Length = 207
Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 99/190 (52%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GF DR+ +K F +++ + +G +L+KP
Sbjct: 19 LIVGLGNPGPDYETTRHNAGFWLADRLADDLRATFALEKGFMGMVAKARFEGENVLLLKP 78
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FYKL E LV+HD+LDL G +++K GGG AGHNGLK I
Sbjct: 79 ITYMNRSGQAVGALARFYKLAP-EQVLVLHDELDLLPGQVKMKQGGGHAGHNGLKDIQAA 137
Query: 122 CGK-NYKRLRIGIGRPPD---TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G N+ RLR+GIG P + VL E+ + +ID +P L + +
Sbjct: 138 LGTPNFWRLRLGIGHPRTLNLAQQVADFVLHPPRRDEQAEIDTVIDRCRAVVPALLRGDF 197
Query: 178 VSFLNHIVSV 187
+ +
Sbjct: 198 AQATRQLHTA 207
>gi|256374802|ref|YP_003098462.1| peptidyl-tRNA hydrolase [Actinosynnema mirum DSM 43827]
gi|255919105|gb|ACU34616.1| peptidyl-tRNA hydrolase [Actinosynnema mirum DSM 43827]
Length = 189
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 73/184 (39%), Positives = 100/184 (54%), Gaps = 2/184 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+V GLGN G +Y RHN GF+ +D + K AE+ EG+L G R +L KP+
Sbjct: 7 LVVGLGNSGPKYEGTRHNAGFLVLDELADRVGGRFKAHKGGAEVVEGRLAGQRVVLAKPR 66
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
+MN SG + FYK + +V+HD+LDL FG +RLK GGGD GHNGL+SI+
Sbjct: 67 GYMNNSGGPVSGTAKFYK-AQPASVIVVHDELDLPFGAVRLKLGGGDNGHNGLRSITRSL 125
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G K+Y R+R G+ RPP +VL +FS ER L +D A ++ L +
Sbjct: 126 GTKDYLRVRFGVDRPPGRMDPADYVLKDFSVVERKQLALELDRAADAVEALVSSGLEAAQ 185
Query: 182 NHIV 185
N
Sbjct: 186 NQFH 189
>gi|120405738|ref|YP_955567.1| peptidyl-tRNA hydrolase [Mycobacterium vanbaalenii PYR-1]
gi|166229427|sp|A1TEG1|PTH_MYCVP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119958556|gb|ABM15561.1| peptidyl-tRNA hydrolase [Mycobacterium vanbaalenii PYR-1]
Length = 192
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 109/186 (58%), Gaps = 3/186 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHN GFM +D + KK AE++ G+L G +L KP
Sbjct: 6 LVVGLGNPGPQYATTRHNAGFMVVDILADRMGEKFKVHKKSGAEVATGRLAGRPVVLAKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+ +MN SG+ + + FY + + +++HD+LD+DFG +RLK GGG AGHNGL+S++
Sbjct: 66 RVYMNESGRQVGPLAKFYSVAPA-DVVIVHDELDIDFGRIRLKAGGGVAGHNGLRSVASA 124
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++R+R+GIGRPP VL NF+S ER + I++ A + LL +
Sbjct: 125 LGGNDFQRVRVGIGRPPGHKSGASFVLENFNSVERKEVPTILEQAADATELLVAQGLEPA 184
Query: 181 LNHIVS 186
N + +
Sbjct: 185 QNTVHA 190
>gi|301155945|emb|CBW15415.1| peptidyl-tRNA hydrolase [Haemophilus parainfluenzae T3T1]
Length = 194
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 72/190 (37%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E RHN G I+R+ + KF + + ++G +
Sbjct: 5 KLIVGLGNPGDKYAETRHNAGEWLIERLARRFNVSLNAENKFFGYVGKTLINGKEVRFLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LV+HD+LDL GT++LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALANFYRIKP-EEILVLHDELDLPPGTVKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N+ RLRIGIG P + VL + ER L +D + LL K V
Sbjct: 124 QLGNSNNFYRLRIGIGHPGHRDLVSGFVLNKPAPAEREALDKALDEATDCIELLFKEGMV 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|145222528|ref|YP_001133206.1| peptidyl-tRNA hydrolase [Mycobacterium gilvum PYR-GCK]
gi|315442976|ref|YP_004075855.1| peptidyl-tRNA hydrolase [Mycobacterium sp. Spyr1]
gi|189038156|sp|A4T6N5|PTH_MYCGI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145215014|gb|ABP44418.1| peptidyl-tRNA hydrolase [Mycobacterium gilvum PYR-GCK]
gi|315261279|gb|ADT98020.1| peptidyl-tRNA hydrolase [Mycobacterium sp. Spyr1]
Length = 192
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 74/186 (39%), Positives = 106/186 (56%), Gaps = 3/186 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHNIGFM D + KK AE++ G+L G +L KP
Sbjct: 6 LVVGLGNPGPQYATTRHNIGFMVADVLADRMGETFKVHKKSGAEVTTGRLAGRPVVLAKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+ +MN SG+ + + FY + + ++IHD+LD+DFG +RLK GGG AGHNGL+S+
Sbjct: 66 RVYMNESGRQVGPLAKFYSIAPT-DVVIIHDELDIDFGRIRLKAGGGVAGHNGLRSVGSA 124
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+++R+R+GIGRPP VL F+S ER L II+ A + LL +
Sbjct: 125 LSTNDFQRVRVGIGRPPGQKSGASFVLEPFNSRERPELGTIIEQAADATELLIELGIEPA 184
Query: 181 LNHIVS 186
N + +
Sbjct: 185 QNTVHA 190
>gi|292488082|ref|YP_003530959.1| peptidyl-tRNA hydrolase [Erwinia amylovora CFBP1430]
gi|292899293|ref|YP_003538662.1| peptidyl-tRNA hydrolase [Erwinia amylovora ATCC 49946]
gi|291199141|emb|CBJ46255.1| peptidyl-tRNA hydrolase [Erwinia amylovora ATCC 49946]
gi|291553506|emb|CBA20551.1| Peptidyl-tRNA hydrolase [Erwinia amylovora CFBP1430]
gi|312172213|emb|CBX80470.1| Peptidyl-tRNA hydrolase [Erwinia amylovora ATCC BAA-2158]
Length = 195
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + H + KF + + G L+
Sbjct: 5 KLIVGLANPGAEYAATRHNAGAWYVDLLAERHNRSLKPESKFFGYTARLNIGGEDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++P + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVAAMATFYRIP-ADEILVAHDELDLPPGVAKFKQGGGHGGHNGLKDIIS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG + E+ + +D AR + K + +
Sbjct: 124 KLGNNVNFHRLRIGIGHPGDRNQVVGFVLGKPQAAEKALIDNAVDEAARCTEVWLKEDRL 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSYK 193
>gi|325578759|ref|ZP_08148806.1| aminoacyl-tRNA hydrolase [Haemophilus parainfluenzae ATCC 33392]
gi|325159583|gb|EGC71715.1| aminoacyl-tRNA hydrolase [Haemophilus parainfluenzae ATCC 33392]
Length = 194
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 72/190 (37%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E RHN G I+R+ + KF + + ++G +
Sbjct: 5 KLIVGLGNPGDKYAETRHNAGEWLIERLARRFNVSLNAENKFFGYVGKTLINGKEVRFLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LV+HD+LDL GT++LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALANFYRIKP-EEILVLHDELDLPPGTVKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N+ RLRIGIG P + VL + ER L +D + LL K V
Sbjct: 124 QLGNSNNFYRLRIGIGHPGHRDLVSGFVLNKPAPAEREVLDKALDEATDCIELLFKEGMV 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|302530285|ref|ZP_07282627.1| peptidyl-tRNA hydrolase [Streptomyces sp. AA4]
gi|302439180|gb|EFL10996.1| peptidyl-tRNA hydrolase [Streptomyces sp. AA4]
Length = 197
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 79/175 (45%), Positives = 110/175 (62%), Gaps = 2/175 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++AGLGNPG +Y NRHN+GFM +D + + AE+ EG+L G R +L+KP+
Sbjct: 13 LLAGLGNPGPQYAGNRHNVGFMVLDELAGRIGGKFKAHRSGAEVLEGRLAGARVVLVKPR 72
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
+FMNLSG ++ F+K+P +V+HD+LD+DFG L+LK GGGD GHNGL+SI++
Sbjct: 73 SFMNLSGGPVVGAARFFKVPP-SGVVVVHDELDVDFGALKLKLGGGDNGHNGLRSITKSL 131
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G ++Y R+R GIGRPP VL +FS+ ER L ID A + L R
Sbjct: 132 GTRDYYRVRFGIGRPPGRQDPADFVLKDFSTVERKELPFEIDRCADATEALISRG 186
>gi|93005014|ref|YP_579451.1| peptidyl-tRNA hydrolase [Psychrobacter cryohalolentis K5]
gi|119390985|sp|Q1QED6|PTH_PSYCK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|92392692|gb|ABE73967.1| peptidyl-tRNA hydrolase [Psychrobacter cryohalolentis K5]
Length = 193
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 67/188 (35%), Positives = 101/188 (53%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF + + A KKFH GQ+ G L+
Sbjct: 4 KLIVGLGNPGQEYMFTRHNAGFWFVLHLAQQFNITLAPDKKFHGVTGRGQIHGHDVRLLM 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQS++ ++ FY + + + L+ HD+LD+ G+++LKT GG GHNGL+ I+
Sbjct: 64 PLTFMNKSGQSVVPMVKFYGI-DNDELLIAHDELDIPAGSIKLKTDGGHGGHNGLRDITP 122
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ RLR+GIG P + + HVL + E+ + + +LPLL +
Sbjct: 123 HIGNDFHRLRVGIGHPGHKSKVSGHVLSKAAPDEQIAIDSALSAAFDALPLLLGGDVEKA 182
Query: 181 LNHIVSVR 188
+ I +
Sbjct: 183 RSQINGFK 190
>gi|269926460|ref|YP_003323083.1| peptidyl-tRNA hydrolase [Thermobaculum terrenum ATCC BAA-798]
gi|269790120|gb|ACZ42261.1| peptidyl-tRNA hydrolase [Thermobaculum terrenum ATCC BAA-798]
Length = 193
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG EY RHNIGF+ +D + + + A ++E +DG + IL KP
Sbjct: 5 FLIVGLGNPGKEYEHTRHNIGFLVVDELARRYKSSGFSLIDRALVAEICIDGHKAILAKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ ++ Y L + +VI+DDLDL FGT+R++T G GH G++SI +
Sbjct: 65 VTYMNNSGQAVKLLLRRYNLEYQSSLIVIYDDLDLPFGTIRVRTKGSSGGHRGVQSIIDT 124
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G N + R+R+GIGR P + +VLG ++ + ++ +I + A ++ L K
Sbjct: 125 IGSNEFLRVRVGIGRDP-KLDPVDYVLGRWNKEQLPYIDHMITHAADAVESLIKEGVEIT 183
Query: 181 LNHIVS 186
+N +
Sbjct: 184 MNSFNT 189
>gi|315650058|ref|ZP_07903137.1| aminoacyl-tRNA hydrolase [Eubacterium saburreum DSM 3986]
gi|315487687|gb|EFU77991.1| aminoacyl-tRNA hydrolase [Eubacterium saburreum DSM 3986]
Length = 211
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 57/190 (30%), Positives = 107/190 (56%), Gaps = 3/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF ++++ ++K+ + ++ + I+++
Sbjct: 22 MKLIVGLGNPGREYVNTRHNAGFYVVEKLAYELGEDISERKYKGVFTRVRIGNEKAIILE 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ M+++K+ + + +VI+DD++L+ G LR++ G GHNG+KS+
Sbjct: 82 PLTYMNNSGESVRAFMDYFKI-DASDVIVIYDDINLEPGNLRIRLKGSAGGHNGIKSLIA 140
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ R+++G+G P + HVLG+F+ ++ L + ++ LL E
Sbjct: 141 HMGTSDFPRIKVGVGEKPTKMDLADHVLGHFNDEDKKLLDEAASDAIEAIRLLVAGEYDM 200
Query: 180 FLNHIVSVRK 189
+N V+K
Sbjct: 201 AMNRYN-VKK 209
>gi|225181559|ref|ZP_03735001.1| Aminoacyl-tRNA hydrolase [Dethiobacter alkaliphilus AHT 1]
gi|225167807|gb|EEG76616.1| Aminoacyl-tRNA hydrolase [Dethiobacter alkaliphilus AHT 1]
Length = 200
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 74/190 (38%), Positives = 104/190 (54%), Gaps = 3/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+ GLGNPG +Y RHN GF +DRI + P +K HA +G L G +L K
Sbjct: 1 MKIILGLGNPGPKYLTTRHNAGFRTVDRISTAAKIPLYKMGQHAFWGKGSLGGQEVVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG + + + + ++ LV++DDLDL GTLRL+ GG GHNGLKSI+
Sbjct: 61 PMTYMNNSGLAAAALCKAFG-ASPQDLLVVYDDLDLPPGTLRLRPQGGTGGHNGLKSITY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K++ R+RIGIGR + ++ +VL FS E L ++D R+ L K +
Sbjct: 120 HLQTKDFPRMRIGIGR-SEEIAVVDYVLQEFSPQEEAMLEDVLDMAIRAATLFVKEGINA 178
Query: 180 FLNHIVSVRK 189
+N K
Sbjct: 179 AMNRCNVTIK 188
>gi|152970789|ref|YP_001335898.1| peptidyl-tRNA hydrolase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|206576264|ref|YP_002237900.1| peptidyl-tRNA hydrolase [Klebsiella pneumoniae 342]
gi|238895303|ref|YP_002920038.1| peptidyl-tRNA hydrolase [Klebsiella pneumoniae NTUH-K2044]
gi|288934813|ref|YP_003438872.1| peptidyl-tRNA hydrolase [Klebsiella variicola At-22]
gi|290508956|ref|ZP_06548327.1| peptidyl-tRNA hydrolase [Klebsiella sp. 1_1_55]
gi|330009877|ref|ZP_08306632.1| aminoacyl-tRNA hydrolase [Klebsiella sp. MS 92-3]
gi|166199336|sp|A6TAP7|PTH_KLEP7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226694258|sp|B5XW43|PTH_KLEP3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|150955638|gb|ABR77668.1| peptidyl-tRNA hydrolase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|206565322|gb|ACI07098.1| peptidyl-tRNA hydrolase [Klebsiella pneumoniae 342]
gi|238547620|dbj|BAH63971.1| peptidyl-tRNA hydrolase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|288889522|gb|ADC57840.1| peptidyl-tRNA hydrolase [Klebsiella variicola At-22]
gi|289778350|gb|EFD86347.1| peptidyl-tRNA hydrolase [Klebsiella sp. 1_1_55]
gi|328534672|gb|EGF61238.1| aminoacyl-tRNA hydrolase [Klebsiella sp. MS 92-3]
Length = 194
Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + H P + KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLADRHRAPLREESKFFGYTSRINLAGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMATFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG + E+ + +D AR + K
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPASEQKLIDDAVDEAARCTEIWLKDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|302836311|ref|XP_002949716.1| hypothetical protein VOLCADRAFT_59597 [Volvox carteri f.
nagariensis]
gi|300265075|gb|EFJ49268.1| hypothetical protein VOLCADRAFT_59597 [Volvox carteri f.
nagariensis]
Length = 223
Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 63/165 (38%), Positives = 98/165 (59%), Gaps = 3/165 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++++ GLGNPG Y E RHN+GFM ID + K + A + +G++ G + +L+K
Sbjct: 58 LWLIVGLGNPGSNYDETRHNVGFMVIDELARQAGIDCRKLEKSAAVGKGEVHGKQVLLVK 117
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ + FY++P LV+ DDLD +R++ GG GHNGL+SI +
Sbjct: 118 PVTFMNNSGESVAALAKFYRVPP-SRVLVVSDDLDQPVAQVRIRAKGGHGGHNGLRSIID 176
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+ G +++ R+++GIGRP I +VL FS ER + +
Sbjct: 177 RMGGAQDFPRIKVGIGRPSGPMPIATYVLQPFSKAERPDIDLAVQ 221
>gi|226531744|ref|NP_001148279.1| peptidyl-tRNA hydrolase [Zea mays]
gi|194697668|gb|ACF82918.1| unknown [Zea mays]
gi|195617118|gb|ACG30389.1| peptidyl-tRNA hydrolase [Zea mays]
Length = 247
Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 3/189 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN+GF ID I +F A + +G++ +L KP
Sbjct: 53 WLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDASIMLAKP 112
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+S+ ++++++K+P L +V++DDLDL F LRL GG GHNG++SI
Sbjct: 113 QTFMNASGESVGQLVSYFKIP-LSQVVVMYDDLDLPFAKLRLLPKGGHGGHNGMRSIVNH 171
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ RLRIGIGRPP VL F+ E+ L + ++ ++
Sbjct: 172 LKQSRDFPRLRIGIGRPPGKMDPANFVLRPFNKKEQQELDFALHRGLEAVRIMVPEGFNK 231
Query: 180 FLNHIVSVR 188
++ + +
Sbjct: 232 SATYVNTAQ 240
>gi|238792544|ref|ZP_04636177.1| Peptidyl-tRNA hydrolase [Yersinia intermedia ATCC 29909]
gi|238728179|gb|EEQ19700.1| Peptidyl-tRNA hydrolase [Yersinia intermedia ATCC 29909]
Length = 196
Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 72/190 (37%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H P + KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLAQRHNQPLKEESKFFGYTARLNLAGQDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 65 PSTFMNLSGKAVAAMAGFYRILP-EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P D + + VLG S E+ + ID R +L K +
Sbjct: 124 RLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPSSEQTLIDDAIDESIRCTEILLKEDIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|81429217|ref|YP_396218.1| peptidyl-tRNA hydrolase [Lactobacillus sakei subsp. sakei 23K]
gi|119390954|sp|Q38V72|PTH_LACSS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78610860|emb|CAI55912.1| Aminoacyl-tRNA hydrolase (Peptidyl-tRNA hydrolase) [Lactobacillus
sakei subsp. sakei 23K]
Length = 185
Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 102/187 (54%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HNIGFM ID++ + K F AE + +G +L+K
Sbjct: 1 MKMIVGLGNPGSKYAKTKHNIGFMVIDQLCEKYNVTLNKHDFEAEYGSFKYEGETVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ +M++Y++ ++ LVI DD+DL G LRL+ G GHNG+KSI
Sbjct: 61 PLTFMNDSGRSVGPLMSYYQV-GIDELLVIQDDMDLTMGKLRLRQKGSAGGHNGIKSIIA 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV- 178
+ +KRL+IGI P + ++ VL F + ID ++ + +D
Sbjct: 120 HTKSQTFKRLKIGIQHP-QKSTVVNWVLTPFDKDGAPVINQAIDQACEAIDDWCQNDDFM 178
Query: 179 SFLNHIV 185
+N
Sbjct: 179 KTMNKFN 185
>gi|260598223|ref|YP_003210794.1| peptidyl-tRNA hydrolase [Cronobacter turicensis z3032]
gi|260217400|emb|CBA31466.1| Peptidyl-tRNA hydrolase [Cronobacter turicensis z3032]
Length = 192
Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 69/191 (36%), Positives = 97/191 (50%), Gaps = 4/191 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILI 59
M ++ GL NPG EY RHN G +D + P ++ KF S ++G L+
Sbjct: 1 MKLIVGLANPGAEYAATRHNAGAWYVDLLADRFRAPLKEEAKFFGYTSRININGNDVRLL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK I
Sbjct: 61 VPTTFMNLSGKAVAAMATFYRIAPDE-ILVAHDELDLPPGVAKFKLGGGHGGHNGLKDII 119
Query: 120 EKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
K G N + RLR+GIG P D ++ VLG E+ + +D AR + +
Sbjct: 120 SKLGNNPNFHRLRLGIGHPGDKNKVVGFVLGKPPVSEQKLIDDAVDEAARCTEIWLQDGL 179
Query: 178 VSFLNHIVSVR 188
N + S +
Sbjct: 180 TKATNRLHSFK 190
>gi|325288388|ref|YP_004264569.1| peptidyl-tRNA hydrolase [Syntrophobotulus glycolicus DSM 8271]
gi|324963789|gb|ADY54568.1| peptidyl-tRNA hydrolase [Syntrophobotulus glycolicus DSM 8271]
Length = 185
Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 75/187 (40%), Positives = 113/187 (60%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M V GLGNPG +Y + RHN+GFM +DRI + K F + +E + + IL+K
Sbjct: 1 MKAVIGLGNPGIKYADTRHNVGFMLLDRIAGNEDVQ-YSKGFKGKFAEIRHQNRKIILLK 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ E++N+YK+P LE+ LVIHDD+D+ G LR + G GHNG+KSI +
Sbjct: 60 PYTFMNLSGQSVAELINYYKVP-LEDMLVIHDDMDIALGRLRFREKGSAGGHNGIKSIIQ 118
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + + RL+IG+GRP ++ HVL F R L ++ +++ L + ++
Sbjct: 119 ELGTQEFWRLKIGVGRPQKERDVVSHVLSGFDRESREVLSETLEKARKAVFLWLEGKEAE 178
Query: 180 FLNHIVS 186
+ + S
Sbjct: 179 AMQNYNS 185
>gi|256003232|ref|ZP_05428224.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 2360]
gi|281418468|ref|ZP_06249487.1| peptidyl-tRNA hydrolase [Clostridium thermocellum JW20]
gi|255992923|gb|EEU03013.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 2360]
gi|281407552|gb|EFB37811.1| peptidyl-tRNA hydrolase [Clostridium thermocellum JW20]
gi|316939279|gb|ADU73313.1| peptidyl-tRNA hydrolase [Clostridium thermocellum DSM 1313]
Length = 189
Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 114/186 (61%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+F++ GLGNPG +Y RHN+GF ++ + H K K A I +G++ G + IL K
Sbjct: 4 LFVIVGLGNPGAKYENTRHNVGFDTVEFLSKRHDIRLGKLKHKALIGDGEIGGRKVILAK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E++ +YK+P ++N ++I+DD+DL G LRL+ G HNG++S+
Sbjct: 64 PQTFMNLSGESVREIVEWYKIP-VKNIIIIYDDIDLPVGKLRLRPKGSAGTHNGMRSVIY 122
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + + R+RIGI +PP+ +I +VL FS+ ER + ++ A ++ + K S
Sbjct: 123 QLQSEEFPRIRIGIDKPPEGWDLISYVLSRFSADERKKIDEAVEKAADAVETILKSGIDS 182
Query: 180 FLNHIV 185
+N
Sbjct: 183 AMNKYN 188
>gi|330967423|gb|EGH67683.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 194
Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G ++RI + ++KF G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVPERKFFGLTGRFTHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHN L+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNRLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLR+GIG P D + + VLG E+ L ID LP + E
Sbjct: 125 LGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNR 184
Query: 180 FLNHIVSVR 188
+ ++ S +
Sbjct: 185 AMKNLHSQK 193
>gi|296135225|ref|YP_003642467.1| peptidyl-tRNA hydrolase [Thiomonas intermedia K12]
gi|295795347|gb|ADG30137.1| peptidyl-tRNA hydrolase [Thiomonas intermedia K12]
Length = 206
Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 69/185 (37%), Positives = 100/185 (54%), Gaps = 3/185 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ +RHN GF +D+I + ++ F +++ +L L++P
Sbjct: 4 LLVGLGNPGPEHALDRHNAGFWLVDQIATAAGASLKPERGFFGDVARVRLQSHELWLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ FYK+ EN LV HD+LDL G +LK GGG AGHNGL+ +
Sbjct: 64 STYMNRSGQSVGAFARFYKIAP-ENILVAHDELDLPPGQAKLKLGGGHAGHNGLRDLIAH 122
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G N+ RLR+GIG P D +I VLG E + ++ LP L K E +
Sbjct: 123 LGTPNFWRLRLGIGHPGDRDAVIGFVLGKPPQSELKLIEQAMEQSRAVLPQLLKGEFEAA 182
Query: 181 LNHIV 185
+ +
Sbjct: 183 MMQLH 187
>gi|220930454|ref|YP_002507363.1| peptidyl-tRNA hydrolase [Clostridium cellulolyticum H10]
gi|220000782|gb|ACL77383.1| peptidyl-tRNA hydrolase [Clostridium cellulolyticum H10]
Length = 189
Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 74/185 (40%), Positives = 113/185 (61%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG ++ RHN+GF ID I + K F A EG ++G+RTIL+KP
Sbjct: 5 YLFVGLGNPGTKFENTRHNVGFDTIDYISVKYNIKLSKIGFKALYGEGSIEGIRTILVKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ E++++YKLP LE +VI+DD+DL+ G +R++ G HNG+KSI +
Sbjct: 65 QTFMNLSGESVREIVDWYKLP-LERLIVIYDDIDLEPGKMRVRPKGSSGTHNGMKSIIYQ 123
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ + R+RIGIGR P+ + +VL FS +R + I A++ ++A+
Sbjct: 124 LQDDSFPRVRIGIGRAPEKWDLADYVLSKFSKEDRQVIDQSIVKAAQAAIMIAQSGTEKA 183
Query: 181 LNHIV 185
+N
Sbjct: 184 MNSYN 188
>gi|28209961|ref|NP_780905.1| peptidyl-tRNA hydrolase [Clostridium tetani E88]
gi|46576800|sp|Q899I4|PTH_CLOTE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|28202396|gb|AAO34842.1| peptidyl-tRNA hydrolase [Clostridium tetani E88]
Length = 188
Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 70/189 (37%), Positives = 114/189 (60%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG EY + RHNIGF +D+I + P +++F +G++ + IL+K
Sbjct: 1 MFLLVGLGNPGKEYEKTRHNIGFEAVDKISYEYNIPIKRERFKGVFGDGRISNEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+SL E++ +Y +P + N +VI+DD+DL+ G LR++T G GHNG+KSI
Sbjct: 61 PTTYMNLSGESLREIIEYYNIP-ITNVIVIYDDVDLEVGRLRIRTKGSAGGHNGIKSIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ RLRIG+G+P ++ HVLG F+ + + ++ I + +
Sbjct: 120 NLNSEDFIRLRIGVGKP--QRDMVSHVLGKFAKEDEKNIEEVLKIIPELAYTIINQGPQE 177
Query: 180 FLNHIVSVR 188
+N + R
Sbjct: 178 AMNKYNNFR 186
>gi|304315713|ref|YP_003850858.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777215|gb|ADL67774.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 190
Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 4/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+ GLGNPG EY RHN+GF ID + K +F + I EG + IL K
Sbjct: 1 MYIIVGLGNPGREYEGTRHNMGFDVIDDLSEKLNIAVKKLRFKSLIGEGIYKEEKVILQK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ +++NFYKLP L N +V++DD DLD G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNSSGEAVYDIVNFYKLP-LSNLIVVYDDKDLDVGKIRIRKKGSSGGHNGMKSIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ R+R+GIG+P +I HVLG F+ ++ + ID A ++ + +
Sbjct: 120 LLNSEDFPRVRVGIGKP--KGDMIEHVLGRFNESDKTIVDNSIDRAADAIIDIIENGVEH 177
Query: 180 FLN 182
+N
Sbjct: 178 AMN 180
>gi|238755540|ref|ZP_04616878.1| Peptidyl-tRNA hydrolase [Yersinia ruckeri ATCC 29473]
gi|238706220|gb|EEP98599.1| Peptidyl-tRNA hydrolase [Yersinia ruckeri ATCC 29473]
Length = 196
Score = 233 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +DR+ + + KF+ + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWFVDRLAESNNQSLKEESKFYGYTARLNLAGQDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 65 PSTFMNLSGKAVSAMASFYRILP-EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P D + + VLG + E+ + ID R +L K +
Sbjct: 124 QLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQALIDETIDEAIRCTDVLLKEDVT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|300115102|ref|YP_003761677.1| peptidyl-tRNA hydrolase [Nitrosococcus watsonii C-113]
gi|299541039|gb|ADJ29356.1| peptidyl-tRNA hydrolase [Nitrosococcus watsonii C-113]
Length = 193
Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 102/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+++ GLGNPG EY + RHN GF +D + S KF + + G L+K
Sbjct: 6 WLLIGLGNPGIEYAQTRHNAGFWWLDAVASELGIDFKPGAKFFGDYARAHWRGHDLWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++L ++N+Y++P LE L+ HDDLDL G +LK GG GHNGL+ I
Sbjct: 66 PTTFMNRSGQAVLALLNYYQIP-LERLLIAHDDLDLPPGIAKLKRTGGHGGHNGLRDIIN 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G+ ++ RLR+G+G P ++ +VL S +R + I LP + +
Sbjct: 125 RLGRRDFLRLRLGVGHPGSGQDVVSYVLNRPSREDRQAIETAIGAGFEVLPEVLAGDTEK 184
Query: 180 FLNHIVS 186
++ + S
Sbjct: 185 AMHRLHS 191
>gi|89900452|ref|YP_522923.1| peptidyl-tRNA hydrolase [Rhodoferax ferrireducens T118]
gi|89345189|gb|ABD69392.1| peptidyl-tRNA hydrolase [Rhodoferax ferrireducens T118]
Length = 225
Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 3/181 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
+ GLGNPG EY RHN GF +D + K +H ++ ++G L+K
Sbjct: 21 KLFVGLGNPGPEYEFTRHNAGFWWLDAVARELKASLAMDKTYHGLVTRVTVNGQAVWLLK 80
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ + F+K+ E LV HD+LD+ G +LK GG AGHNGL+ I
Sbjct: 81 PQTFMNLSGKSVAALARFFKIEPQE-ILVAHDELDIVPGEAKLKLGGSHAGHNGLRDIHA 139
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLR+G+G P + +I VL S R + I +LP L +
Sbjct: 140 QLGTDDYWRLRLGVGHPGVKSEVINWVLKKPSLDHRLAMDQCIARAITALPHLLAGDMDK 199
Query: 180 F 180
Sbjct: 200 A 200
>gi|294339320|emb|CAZ87676.1| peptidyl-tRNA hydrolase (PTH) [Thiomonas sp. 3As]
Length = 206
Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats.
Identities = 70/185 (37%), Positives = 101/185 (54%), Gaps = 3/185 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ +RHN GF +D+I + ++ F +++ +L G L++P
Sbjct: 4 LLVGLGNPGQEHALDRHNAGFWLVDQIATAAGVSLKPERGFFGDVARVRLQGHELWLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ FYK+ EN LV HD+LDL G +LK GGG AGHNGL+ +
Sbjct: 64 STYMNRSGQSVGAFARFYKIAP-ENILVAHDELDLPPGQAKLKLGGGHAGHNGLRDLIAH 122
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G N+ RLR+GIG P D +I VLG E + ++ LP L K E +
Sbjct: 123 LGTPNFWRLRLGIGHPGDRDAVIGFVLGKPPQSELKLIEQAMEQSQAVLPQLLKGEFEAA 182
Query: 181 LNHIV 185
+ +
Sbjct: 183 MMQLH 187
>gi|325282473|ref|YP_004255014.1| Peptidyl-tRNA hydrolase [Deinococcus proteolyticus MRP]
gi|324314282|gb|ADY25397.1| Peptidyl-tRNA hydrolase [Deinococcus proteolyticus MRP]
Length = 210
Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats.
Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 9/193 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD------GL 54
M ++ GLGNPG +Y RHN+G++ +D + W+K AE E +L G
Sbjct: 1 MRLIVGLGNPGEKYAATRHNVGWLVVDELARRTGG-HWRKDGEAETCEVRLGQGGGQAGE 59
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
+ +L+KPQTFMN SG+++ ++++Y+L ++ LV+ DDLD FG L+L+ GG G NG
Sbjct: 60 KVLLVKPQTFMNSSGRAVAPLLSYYRLAP-DDLLVVQDDLDSPFGLLKLRRGGRHGGQNG 118
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
L+ I G +++ RL+IGI RPP VL ++ ER L ++D A++ +
Sbjct: 119 LRDIIRLLGTQDFDRLKIGISRPPPGRDPADWVLSRWAEAERPVLERLVDLGAQAAEVWT 178
Query: 174 KREDVSFLNHIVS 186
+ S
Sbjct: 179 LQGMQEAQGRFNS 191
>gi|270290198|ref|ZP_06196424.1| peptidyl-tRNA hydrolase [Pediococcus acidilactici 7_4]
gi|270281735|gb|EFA27567.1| peptidyl-tRNA hydrolase [Pediococcus acidilactici 7_4]
Length = 185
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY + RHN GFM +D + + +K A + E +G + +L+K
Sbjct: 1 MKMIVGLGNIGKEYDQTRHNTGFMVVDALAKKYGVDHFKIHHEAMVGEFFSNGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M++Y L L + +V++DD+D+ G +RL+ G GHNG+KS+
Sbjct: 61 PTTYMNDSGRAVRPLMDYYDLA-LTDLIVVYDDMDMPVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G ++RLR+GI P ++ +VLG F+ ++ + N +L E
Sbjct: 120 HLGTEKFRRLRVGIEHPAH-QKVVDYVLGRFTKEQKADFEIGVQNAIAALDDWLVGAEFS 178
Query: 179 SFLNHIV 185
+N
Sbjct: 179 QLMNQYN 185
>gi|257438136|ref|ZP_05613891.1| aminoacyl-tRNA hydrolase [Faecalibacterium prausnitzii A2-165]
gi|257199467|gb|EEU97751.1| aminoacyl-tRNA hydrolase [Faecalibacterium prausnitzii A2-165]
Length = 257
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 60/186 (32%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNP +Y RHN GF +D + K KF +G++DG + +L+KP
Sbjct: 72 WLIAGLGNPEAKYDGTRHNAGFAALDSLAGKWGISVSKTKFQGLWGQGEVDGHKVVLLKP 131
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG S+ + F+K+P ++ +V+ DD+ G LR++ G GHNGLKSI +
Sbjct: 132 LTYMNLSGDSIAPLAGFFKIP-ADHVIVLCDDITQAPGKLRIRPSGSAGGHNGLKSIIAR 190
Query: 122 C-GKNYKRLRIGIG-RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+N+ R+RIG+G +P + VLG F + + ++ + L+ +
Sbjct: 191 LGGENFPRIRIGVGAKPRPDYDLADWVLGKFPPEDAKAMADRYPDLEAAAKLIMDGKLGL 250
Query: 180 FLNHIV 185
+
Sbjct: 251 AQSKYN 256
>gi|19704918|ref|NP_602413.1| peptidyl-tRNA hydrolase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|22095993|sp|Q8RIJ5|PTH_FUSNN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|19712813|gb|AAL93712.1| Peptidyl-tRNA hydrolase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 191
Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 73/189 (38%), Positives = 112/189 (59%), Gaps = 3/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHNIGF+ +D + ++KF A +SE +DG + I K
Sbjct: 1 MKVVIGLGNPGKKYEKTRHNIGFIAVDNLRKKFNISDEREKFQALVSEKNIDGEKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG S++E++NFYKL ++ +VI+DD+DL FG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNSVIEIINFYKLDPKKDIIVIYDDMDLSFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL-PLLAKREDVS 179
G+ + R++ GIG + HVLG F+ E+ L I++ I + +L+ +
Sbjct: 121 HIGEEFIRIKCGIG--AKERDAVEHVLGEFNQTEQKDLDEILEKINNCVIEMLSVQNLDR 178
Query: 180 FLNHIVSVR 188
+ +
Sbjct: 179 IMQKYNKKK 187
>gi|145636338|ref|ZP_01792007.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittHH]
gi|145270503|gb|EDK10437.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittHH]
Length = 194
Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ + KF + + ++G L+
Sbjct: 5 KLIVGLGNPGEKYADTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPPGTAKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P + +VL S +R L ++D + ++ K V
Sbjct: 124 QLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRNALEKVLDEATDCVEMIFKDGMV 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|73663563|ref|YP_302344.1| peptidyl-tRNA hydrolase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|119391016|sp|Q49V11|PTH_STAS1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|72496078|dbj|BAE19399.1| peptidyl-tRNA hydrolase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 190
Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 110/191 (57%), Gaps = 3/191 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + + RHNIGF ID + + F K+KF + +L G + + I+
Sbjct: 1 MKCIVGLGNIGKRFEQTRHNIGFEVIDFMLEQNRFSLDKQKFKGAYTIERLAGEKVMFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M +Y + ++E+ +V++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVAPLMKYYDI-DIEDLIVLYDDLDLPQGEIRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + +KR+RIG+ RP + I+ +VL FS+ E + +I++ AR++ +
Sbjct: 120 MLGTDQFKRIRIGVDRPSNGMAIVDYVLQKFSNQEMETMNKVIEHSARAIEAYIESNRFD 179
Query: 179 SFLNHIVSVRK 189
+N K
Sbjct: 180 RVMNEYNGEIK 190
>gi|303256349|ref|ZP_07342365.1| aminoacyl-tRNA hydrolase [Burkholderiales bacterium 1_1_47]
gi|330999044|ref|ZP_08322769.1| aminoacyl-tRNA hydrolase [Parasutterella excrementihominis YIT
11859]
gi|302861078|gb|EFL84153.1| aminoacyl-tRNA hydrolase [Burkholderiales bacterium 1_1_47]
gi|329575786|gb|EGG57312.1| aminoacyl-tRNA hydrolase [Parasutterella excrementihominis YIT
11859]
Length = 201
Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 102/195 (52%), Gaps = 9/195 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGN G Y RHN GF +D + + + +KF ++++ ++ G+ IL+KP
Sbjct: 8 LIVGLGNIGDAYKGTRHNAGFHFVDEVANEYGARFQADRKFFGDVAKARIGGVEVILLKP 67
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T MNLSG+++ V FYK+ E LV HD+LDL GT RLK GGG AGHNGLKSI
Sbjct: 68 STLMNLSGKAVAAVSAFYKITPSE-ILVAHDELDLLPGTARLKIGGGSAGHNGLKSIVSC 126
Query: 122 CG-KNYKRLRIGIGRPPDTA---HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G ++ RLRIGIG P D + +VL ++ + I + + + +
Sbjct: 127 LGSSDFVRLRIGIGHPRDRQLQIPVADYVLSRPPKEDQELISSAIKKALSCIDEIVEGDF 186
Query: 178 VSFL---NHIVSVRK 189
+ N RK
Sbjct: 187 SRAMSILNEKNDPRK 201
>gi|169830289|ref|YP_001716271.1| aminoacyl-tRNA hydrolase [Candidatus Desulforudis audaxviator
MP104C]
gi|238688211|sp|B1I197|PTH_DESAP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169637133|gb|ACA58639.1| Aminoacyl-tRNA hydrolase [Candidatus Desulforudis audaxviator
MP104C]
Length = 195
Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 71/189 (37%), Positives = 106/189 (56%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN GFM +DR+ +++ + + EG+L+G+R +L K
Sbjct: 1 MKLIVGLGNPGAKYRFTRHNAGFMVVDRLAGAAGTTVNRRRCFSLVGEGRLNGVRVVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG ++ + Y+L L + LVI DDLDL+FG +RL+ GG GH GL SI
Sbjct: 61 PQTYMNLSGLAVSALCRHYRL-ELADLLVICDDLDLEFGRIRLRPKGGSGGHRGLASIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ R+RIGIG+ HVLG F+ ++ L I+ A + +
Sbjct: 120 ALGSSDFPRVRIGIGK---AEDASAHVLGEFAPEDQSGLEEILSTAALAAACACREGLDE 176
Query: 180 FLNHIVSVR 188
++ S R
Sbjct: 177 AMSRFNSWR 185
>gi|332041920|gb|EGI78264.1| peptidyl-tRNA hydrolase [Hylemonella gracilis ATCC 19624]
Length = 225
Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 3/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILI 59
+ ++ GLGNPG EY RHN GF ID + + + ++ G L+
Sbjct: 2 LKLLVGLGNPGPEYEATRHNAGFWWIDAVARELKAGLTLDRGYQGLVARTTYKGQTLWLL 61
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+P TFMN SG+S+ + F+K+ + LV HD++D+ G ++LK GGG AGHNGL+S+
Sbjct: 62 EPMTFMNESGRSVAALARFFKI-QPDEILVAHDEMDIVPGEVKLKRGGGHAGHNGLRSLH 120
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G +Y RLRIG+G P + ++ VL S R + + ++LP L
Sbjct: 121 AQLGSDDYWRLRIGVGHPGVKSEVVSWVLKKPSLDHRAAIEDAMIRTLQALPDLLSGAMD 180
Query: 179 SFLNHIVS 186
HI +
Sbjct: 181 KATMHIHT 188
>gi|328956570|ref|YP_004373956.1| peptidyl-tRNA hydrolase [Carnobacterium sp. 17-4]
gi|328672894|gb|AEB28940.1| peptidyl-tRNA hydrolase [Carnobacterium sp. 17-4]
Length = 191
Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 107/190 (56%), Gaps = 3/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HNIGF+ +D H K KF A +E + + +L+K
Sbjct: 1 MKMIVGLGNPGTKYKNTKHNIGFITVDEFAIQHKMEFSKTKFEALYAEAFVGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ ++M+++ + +E+ +VI+DDLDL G LRL+ G GHNG+KSI +
Sbjct: 61 PQTFMNDSGRAVRQLMDYFNV-EVEDLVVIYDDLDLPVGKLRLRQKGSAGGHNGIKSIIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
++ R+RIGI RP +I+HVL F + LL I + +L + +
Sbjct: 120 HIDTSDFNRIRIGIDRPMGKQTVIQHVLSGFHKSQHEELLITIKDSVAALDYWIEGHPFL 179
Query: 179 SFLNHIVSVR 188
+N +
Sbjct: 180 EVMNQFNKKK 189
>gi|291298816|ref|YP_003510094.1| peptidyl-tRNA hydrolase [Stackebrandtia nassauensis DSM 44728]
gi|290568036|gb|ADD41001.1| peptidyl-tRNA hydrolase [Stackebrandtia nassauensis DSM 44728]
Length = 213
Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 76/190 (40%), Positives = 112/190 (58%), Gaps = 5/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQ--LDGLRTIL 58
+++ GLGNPG +Y NRHN+GFM D + + K AE+ +G+ + G + IL
Sbjct: 6 YLIVGLGNPGPKYAGNRHNVGFMVADLLAERVGGSMKRAAKVRAEVCQGRLSIGGPQVIL 65
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MN+SGQ++ + F+K+P E +V+HD+LDL +G +RLK GGG+ GHNGLKS
Sbjct: 66 VKPLTYMNVSGQAVAPLAVFFKVP-AERIIVVHDELDLPYGVVRLKAGGGENGHNGLKST 124
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
S+ G K Y R R GIGRPP VL +FS E+ L +D A ++ + +
Sbjct: 125 SQALGDKGYVRARFGIGRPPGRIDPAAFVLRDFSPAEKKELPLFVDLTADAVSEVVESGL 184
Query: 178 VSFLNHIVSV 187
V N ++
Sbjct: 185 VKAQNKFHAL 194
>gi|238788560|ref|ZP_04632353.1| Peptidyl-tRNA hydrolase [Yersinia frederiksenii ATCC 33641]
gi|238723473|gb|EEQ15120.1| Peptidyl-tRNA hydrolase [Yersinia frederiksenii ATCC 33641]
Length = 196
Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 100/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEESKFFGYTARLNLAGQDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 65 PSTFMNLSGKAVAAMAGFYRILP-EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P D + + VLG + E+ + ID R +L K +
Sbjct: 124 RLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQTLIDDAIDESIRCTEVLLKEDIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|117620789|ref|YP_857655.1| peptidyl-tRNA hydrolase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|166199300|sp|A0KN04|PTH_AERHH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|117562196|gb|ABK39144.1| peptidyl-tRNA hydrolase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 198
Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN G ++++ +H ++ KF + Q+DG L+
Sbjct: 6 KLIVGLGNPGPEYAKTRHNAGAWYVEQLARWHNVSLREEPKFFGHTARIQVDGQDVRLLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK I
Sbjct: 66 PNTYMNLSGKAVAALARFYQIEP-EAMLVAHDELDLPPGIAKFKQGGGHGGHNGLKDIIA 124
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLR+GIG P + VL S E+ + +D R+ +L K++
Sbjct: 125 RMGNNNNFFRLRLGIGHPGTKELVAGFVLTKAPSSEQSLIDAALDESLRATDILFKQDMT 184
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 185 KAMNRLHSFK 194
>gi|15923492|ref|NP_371026.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus Mu50]
gi|15926179|ref|NP_373712.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus N315]
gi|21282186|ref|NP_645274.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus MW2]
gi|49482729|ref|YP_039953.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49485366|ref|YP_042587.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650043|ref|YP_185434.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus COL]
gi|87160087|ref|YP_493189.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194262|ref|YP_499054.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|148266961|ref|YP_001245904.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus JH9]
gi|150393007|ref|YP_001315682.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus JH1]
gi|151220677|ref|YP_001331499.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156978830|ref|YP_001441089.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus Mu3]
gi|161508742|ref|YP_001574401.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142306|ref|ZP_03566799.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253315229|ref|ZP_04838442.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253730970|ref|ZP_04865135.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253735237|ref|ZP_04869402.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
TCH130]
gi|255005295|ref|ZP_05143896.2| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257424614|ref|ZP_05601042.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427280|ref|ZP_05603681.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429917|ref|ZP_05606303.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
68-397]
gi|257432619|ref|ZP_05608981.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus E1410]
gi|257435523|ref|ZP_05611573.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus M876]
gi|257794257|ref|ZP_05643236.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9781]
gi|258407226|ref|ZP_05680371.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9763]
gi|258420807|ref|ZP_05683743.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9719]
gi|258424462|ref|ZP_05687341.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9635]
gi|258429619|ref|ZP_05688293.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9299]
gi|258446111|ref|ZP_05694272.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A6300]
gi|258448019|ref|ZP_05696149.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A6224]
gi|258452817|ref|ZP_05700812.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A5948]
gi|258453835|ref|ZP_05701808.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A5937]
gi|262049987|ref|ZP_06022846.1| peptidyl-tRNA hydrolase [Staphylococcus aureus D30]
gi|262052531|ref|ZP_06024728.1| peptidyl-tRNA hydrolase [Staphylococcus aureus 930918-3]
gi|269202122|ref|YP_003281391.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ED98]
gi|282895110|ref|ZP_06303330.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A8117]
gi|282903088|ref|ZP_06310980.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus C160]
gi|282904877|ref|ZP_06312737.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282907824|ref|ZP_06315662.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910140|ref|ZP_06317946.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913330|ref|ZP_06321121.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus M899]
gi|282915820|ref|ZP_06323588.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus D139]
gi|282918283|ref|ZP_06326023.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus C427]
gi|282923034|ref|ZP_06330720.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus C101]
gi|282925577|ref|ZP_06333230.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9765]
gi|283768937|ref|ZP_06341846.1| peptidyl-tRNA hydrolase PTH1 family protein [Staphylococcus aureus
subsp. aureus H19]
gi|283957292|ref|ZP_06374750.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284023511|ref|ZP_06377909.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus 132]
gi|293500379|ref|ZP_06666231.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
58-424]
gi|293509317|ref|ZP_06668033.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus M809]
gi|293515906|ref|ZP_06670596.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
M1015]
gi|294850362|ref|ZP_06791095.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9754]
gi|295407392|ref|ZP_06817189.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A8819]
gi|295427036|ref|ZP_06819673.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296276155|ref|ZP_06858662.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus MR1]
gi|297207395|ref|ZP_06923834.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297246472|ref|ZP_06930312.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A8796]
gi|297591587|ref|ZP_06950224.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus MN8]
gi|300910354|ref|ZP_07127807.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
TCH70]
gi|304380520|ref|ZP_07363196.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|54038906|sp|P65868|PTH_STAAN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54038907|sp|P65869|PTH_STAAW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54041592|sp|P65867|PTH_STAAM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56749398|sp|Q6GBY6|PTH_STAAS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56749427|sp|Q6GJG9|PTH_STAAR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56749435|sp|Q6YP15|PTH_STAAU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052875|sp|Q5HIH3|PTH_STAAC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391012|sp|Q2FJD9|PTH_STAA3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391013|sp|Q2G0R9|PTH_STAA8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229456|sp|A7WYQ5|PTH_STAA1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|172048769|sp|A6QEF5|PTH_STAAE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038168|sp|A6TYX7|PTH_STAA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038169|sp|A5IQ55|PTH_STAA9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038170|sp|A8Z0Z1|PTH_STAAT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|13700392|dbj|BAB41690.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus N315]
gi|14246270|dbj|BAB56664.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus Mu50]
gi|21203622|dbj|BAB94322.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus MW2]
gi|21307671|gb|AAK61416.1| peptidyl-tRNA hydrolase [Staphylococcus aureus]
gi|49240858|emb|CAG39525.1| putative peptidyl-tRNA hydrolase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49243809|emb|CAG42234.1| putative peptidyl-tRNA hydrolase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57284229|gb|AAW36323.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus COL]
gi|87126061|gb|ABD20575.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201820|gb|ABD29630.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|147740030|gb|ABQ48328.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus JH9]
gi|149945459|gb|ABR51395.1| Aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus JH1]
gi|150373477|dbj|BAF66737.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156720965|dbj|BAF77382.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus Mu3]
gi|160367551|gb|ABX28522.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253725282|gb|EES94011.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726797|gb|EES95526.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
TCH130]
gi|257272641|gb|EEV04761.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275931|gb|EEV07399.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279433|gb|EEV10028.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
68-397]
gi|257282484|gb|EEV12617.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus E1410]
gi|257285160|gb|EEV15277.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus M876]
gi|257788229|gb|EEV26569.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9781]
gi|257841184|gb|EEV65633.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9763]
gi|257843199|gb|EEV67612.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9719]
gi|257845331|gb|EEV69366.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9635]
gi|257849678|gb|EEV73645.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9299]
gi|257855088|gb|EEV78030.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A6300]
gi|257858709|gb|EEV81582.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A6224]
gi|257859503|gb|EEV82356.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A5948]
gi|257864006|gb|EEV86761.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A5937]
gi|259159578|gb|EEW44625.1| peptidyl-tRNA hydrolase [Staphylococcus aureus 930918-3]
gi|259161922|gb|EEW46505.1| peptidyl-tRNA hydrolase [Staphylococcus aureus D30]
gi|262074412|gb|ACY10385.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ED98]
gi|269940073|emb|CBI48449.1| putative peptidyl-tRNA hydrolase [Staphylococcus aureus subsp.
aureus TW20]
gi|282314553|gb|EFB44940.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus C101]
gi|282317849|gb|EFB48218.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus C427]
gi|282320311|gb|EFB50653.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus D139]
gi|282322801|gb|EFB53121.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus M899]
gi|282325988|gb|EFB56294.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328300|gb|EFB58575.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331994|gb|EFB61503.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282592481|gb|EFB97493.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9765]
gi|282596514|gb|EFC01474.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus C160]
gi|282762528|gb|EFC02668.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A8117]
gi|283461118|gb|EFC08204.1| peptidyl-tRNA hydrolase PTH1 family protein [Staphylococcus aureus
subsp. aureus H19]
gi|283469794|emb|CAQ49005.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ST398]
gi|283791216|gb|EFC30026.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285816201|gb|ADC36688.1| Peptidyl-tRNA hydrolase [Staphylococcus aureus 04-02981]
gi|290921314|gb|EFD98372.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
M1015]
gi|291096339|gb|EFE26599.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
58-424]
gi|291467862|gb|EFF10372.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus M809]
gi|294822786|gb|EFG39222.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A9754]
gi|294967749|gb|EFG43781.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A8819]
gi|295129039|gb|EFG58668.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296887958|gb|EFH26852.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297176659|gb|EFH35921.1| peptidyl-tRNA hydrolase [Staphylococcus aureus A8796]
gi|297575456|gb|EFH94173.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus MN8]
gi|298693832|gb|ADI97054.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ED133]
gi|300888343|gb|EFK83530.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
TCH70]
gi|302332215|gb|ADL22408.1| putative peptidyl-tRNA hydrolase [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302750393|gb|ADL64570.1| putative peptidyl-tRNA hydrolase [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340924|gb|EFM06848.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312436408|gb|ADQ75479.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
TCH60]
gi|312828997|emb|CBX33839.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315128630|gb|EFT84633.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus CGS03]
gi|315193865|gb|EFU24259.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus CGS00]
gi|315196185|gb|EFU26541.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus CGS01]
gi|320139411|gb|EFW31289.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320144188|gb|EFW35956.1| peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323438734|gb|EGA96474.1| peptidyl-tRNA hydrolase [Staphylococcus aureus O11]
gi|323442054|gb|EGA99689.1| peptidyl-tRNA hydrolase [Staphylococcus aureus O46]
gi|329313221|gb|AEB87634.1| Peptidyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus T0131]
gi|329725048|gb|EGG61543.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
21172]
gi|329729793|gb|EGG66190.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
21189]
gi|329731061|gb|EGG67433.1| aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp. aureus
21193]
Length = 190
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF +D I + F K+KF + +++G + + I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVVDYILEKNNFSLDKQKFKGAYTIERMNGDKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + N E+ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVAPIMDYYNV-NPEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + +KR+RIG+GRP + + +VL FS+ E + +I++ AR++ +
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMTVPDYVLQRFSNDEMVTMEKVIEHAARAIEKFVETSRFD 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 HVMNEFN 186
>gi|238783262|ref|ZP_04627287.1| Peptidyl-tRNA hydrolase [Yersinia bercovieri ATCC 43970]
gi|238715855|gb|EEQ07842.1| Peptidyl-tRNA hydrolase [Yersinia bercovieri ATCC 43970]
Length = 196
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H ++ KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEEAKFFGYTARLNLAGQDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG++++ + FY++ E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 65 PSTFMNLSGKAVVAMAGFYRI-QPEEILVAHDELDIPPGAAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + ++ VLG + E+ + ID R +L K +
Sbjct: 124 KLGNNPNFYRLRIGIGHPGDKSKVVGFVLGKPPASEQLLIDEAIDEAIRCTEVLMKEDIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|296329172|ref|ZP_06871673.1| aminoacyl-tRNA hydrolase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296153528|gb|EFG94345.1| aminoacyl-tRNA hydrolase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 191
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 74/189 (39%), Positives = 113/189 (59%), Gaps = 3/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHNIGF+ +D + ++KF A +SE +DG + I K
Sbjct: 1 MKVVIGLGNPGKKYEKTRHNIGFIAVDNLRKKFNIIDEREKFQALVSEKNIDGEKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG S++E++NFYKL ++ +VI+DD+DL FG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNSVIEIVNFYKLDPKKDIIVIYDDMDLPFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL-PLLAKREDVS 179
G+ + R++ GIG + HVLG F+ E+ L I++NI + +L+ +
Sbjct: 121 HIGEEFIRIKCGIG--AKEKDAVEHVLGEFNQTEQKDLDEILENINNCVIEILSVQNLDR 178
Query: 180 FLNHIVSVR 188
+ +
Sbjct: 179 IMQKYNKKK 187
>gi|218188893|gb|EEC71320.1| hypothetical protein OsI_03361 [Oryza sativa Indica Group]
Length = 250
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 102/189 (53%), Gaps = 3/189 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN+GF ID I +F A + +G++ +L KP
Sbjct: 56 WLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAKP 115
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+S+ ++++++K+P L LV++DDLDL F LRL GG GHNG++SI
Sbjct: 116 QTFMNASGESVGQLVSYFKIP-LNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGMRSIINH 174
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ RLRIGIGRPP VL F+ E+ L ++ ++A
Sbjct: 175 LKQNRDFPRLRIGIGRPPGKMDPANFVLRPFNRKEQEELDFAFHRGLEAVRIMALEGFNK 234
Query: 180 FLNHIVSVR 188
++ + +
Sbjct: 235 SATYVNTAQ 243
>gi|242058417|ref|XP_002458354.1| hypothetical protein SORBIDRAFT_03g031890 [Sorghum bicolor]
gi|241930329|gb|EES03474.1| hypothetical protein SORBIDRAFT_03g031890 [Sorghum bicolor]
Length = 247
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 3/189 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN+GF ID I +F A + +G++ +L KP
Sbjct: 53 WLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAKP 112
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+S+ ++++++K+P L +V++DDLDL F LRL GG GHNG++SI
Sbjct: 113 QTFMNASGESVGQLVSYFKIP-LNQVVVMYDDLDLPFAKLRLLPKGGHGGHNGMRSIVNH 171
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ RLRIGIGRPP VL F+ E+ L + ++ ++
Sbjct: 172 LKQSRDFPRLRIGIGRPPGKMDPANFVLRPFNKKEQEELDFALHRGLEAVRIMVLGGFNK 231
Query: 180 FLNHIVSVR 188
++ + +
Sbjct: 232 SATYVNTAQ 240
>gi|119390990|sp|Q21XW1|PTH_RHOFD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 207
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 3/181 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
+ GLGNPG EY RHN GF +D + K +H ++ ++G L+K
Sbjct: 3 KLFVGLGNPGPEYEFTRHNAGFWWLDAVARELKASLAMDKTYHGLVTRVTVNGQAVWLLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ + F+K+ E LV HD+LD+ G +LK GG AGHNGL+ I
Sbjct: 63 PQTFMNLSGKSVAALARFFKIEPQE-ILVAHDELDIVPGEAKLKLGGSHAGHNGLRDIHA 121
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLR+G+G P + +I VL S R + I +LP L +
Sbjct: 122 QLGTDDYWRLRLGVGHPGVKSEVINWVLKKPSLDHRLAMDQCIARAITALPHLLAGDMDK 181
Query: 180 F 180
Sbjct: 182 A 182
>gi|115439337|ref|NP_001043948.1| Os01g0693900 [Oryza sativa Japonica Group]
gi|75285812|sp|Q5N9Q7|PTHM_ORYSJ RecName: Full=Peptidyl-tRNA hydrolase, mitochondrial; AltName:
Full=M-PTH; Flags: Precursor
gi|56785144|dbj|BAD81799.1| Peptidyl-tRNA hydrolase-like [Oryza sativa Japonica Group]
gi|113533479|dbj|BAF05862.1| Os01g0693900 [Oryza sativa Japonica Group]
gi|215704712|dbj|BAG94340.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619093|gb|EEE55225.1| hypothetical protein OsJ_03102 [Oryza sativa Japonica Group]
Length = 250
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 102/189 (53%), Gaps = 3/189 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN+GF ID I +F A + +G++ +L KP
Sbjct: 56 WLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAKP 115
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+S+ ++++++K+P L LV++DDLDL F LRL GG GHNG++SI
Sbjct: 116 QTFMNASGESVGQLVSYFKIP-LNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGVRSIINH 174
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ RLRIGIGRPP VL F+ E+ L ++ ++A
Sbjct: 175 LKQNRDFPRLRIGIGRPPGKMDPANFVLRPFNRKEQEELDFAFHRGLEAVRIMALEGFNK 234
Query: 180 FLNHIVSVR 188
++ + +
Sbjct: 235 SATYVNTAQ 243
>gi|124268411|ref|YP_001022415.1| peptidyl-tRNA hydrolase [Methylibium petroleiphilum PM1]
gi|166199361|sp|A2SKU1|PTH_METPP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|124261186|gb|ABM96180.1| peptidyl-tRNA hydrolase [Methylibium petroleiphilum PM1]
Length = 232
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 63/186 (33%), Positives = 96/186 (51%), Gaps = 3/186 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF +D + ++ +H ++ L++P
Sbjct: 4 LMVGLGNPGPEYEATRHNAGFWWVDAVARQLKASLHAERAYHGLVARVNTPVGPVWLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN+SG+S+ + F+K+ E LV HD+LDL G ++LK GGG AGHNGL+ I +
Sbjct: 64 QTYMNVSGKSVAALARFFKIAP-EEILVAHDELDLPPGEMKLKQGGGHAGHNGLRDIHAQ 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLR+GIG P A + +VLG R + I ++ L +
Sbjct: 123 LGSTDYWRLRLGIGHPGVKAEVANYVLGKPMREHREAIDACIVRSLTAVDALLSGDMSKA 182
Query: 181 LNHIVS 186
+ +
Sbjct: 183 TLRLHT 188
>gi|256826844|ref|YP_003150803.1| peptidyl-tRNA hydrolase [Cryptobacterium curtum DSM 15641]
gi|256582987|gb|ACU94121.1| peptidyl-tRNA hydrolase [Cryptobacterium curtum DSM 15641]
Length = 185
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 97/186 (52%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG EY RHN GF ID + WK + A + G L +L K
Sbjct: 1 MYLIVGLGNPGEEYEHTRHNAGFDTIDILADEAGARYWKNECGALSARGVLANEEVVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ++MN SG + ++ N Y + +N +VIHDDLD+ G +R+K GGG AGHNGL+SI +
Sbjct: 61 PQSYMNTSGGPVKQLCNTYGIAP-DNLIVIHDDLDIAPGRIRVKFGGGHAGHNGLRSICD 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K G +++ R+R GIGRPP + +VL + A ++ L +
Sbjct: 120 KLGTRDWFRVRCGIGRPPGRMSVSDYVLSRPRHEAQDDFQVGCATAAEAVSFLIRNGLEK 179
Query: 180 FLNHIV 185
Sbjct: 180 TQQEFN 185
>gi|242239284|ref|YP_002987465.1| peptidyl-tRNA hydrolase [Dickeya dadantii Ech703]
gi|242131341|gb|ACS85643.1| peptidyl-tRNA hydrolase [Dickeya dadantii Ech703]
Length = 195
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 73/190 (38%), Positives = 104/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D++ + P + KF + Q+ G L+
Sbjct: 5 KLIVGLANPGAEYAATRHNAGAWYVDQLAEAYRQPLKEESKFFGYTARLQMAGQDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E LV HD+LDL G +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVAAMATFYRI-QPEEILVAHDELDLLPGVAKLKLGGGHGGHNGLKDIIS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG S+PE+ + ID R +L K + +
Sbjct: 124 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPSAPEQTLIDQAIDEAVRCTEVLMKEDMI 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 RAMNRLHAFK 193
>gi|329122082|ref|ZP_08250690.1| aminoacyl-tRNA hydrolase [Dialister micraerophilus DSM 19965]
gi|327466889|gb|EGF12405.1| aminoacyl-tRNA hydrolase [Dialister micraerophilus DSM 19965]
Length = 194
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 101/189 (53%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY + RHNIGF ++ + WK ++EI +G + I K
Sbjct: 5 MKLIVGLGNPGKEYEKTRHNIGFDVLELFSHRNKLSLWKNFMNSEIVTVMNNGEKIIFAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++ +YK+ E+ VI DDLDL G +R++ G GHNGLKSI
Sbjct: 65 PQTYMNNSGESIGDIAKYYKIEP-EDIWVICDDLDLPVGKVRIRKKGSAGGHNGLKSIMA 123
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+N+ R R+GIG P + +I HVLG + + + +A S+ K
Sbjct: 124 HLQSENFCRFRVGIGHPKNGHTVIEHVLGRPYGEDIKKIEEAEEKVAESIEFALKENIDK 183
Query: 180 FLNHIVSVR 188
+N+ +
Sbjct: 184 AMNYFNDKK 192
>gi|294649569|ref|ZP_06726989.1| aminoacyl-tRNA hydrolase [Acinetobacter haemolyticus ATCC 19194]
gi|292824556|gb|EFF83339.1| aminoacyl-tRNA hydrolase [Acinetobacter haemolyticus ATCC 19194]
Length = 193
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++++ + KFH GQ++G L+ P
Sbjct: 6 LIVGLGNPGKEYAQTRHNAGFWFVEQLADRYGISLKADPKFHGFSGRGQIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS+ FY++ + E+ LV HD+LD+D G +RLK+GGG GHNGL+ I
Sbjct: 66 TTFMNRSGQSVAPFAKFYQI-SPESILVAHDELDMDPGVIRLKSGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVL S E++ + ID+ + LL + +
Sbjct: 125 IGANFHRLRIGIGHPGSKERVSGHVLNKAPSSEQHLMDAAIDHALSKVKLLVDGQVSLAM 184
Query: 182 NHIVSVR 188
N I + +
Sbjct: 185 NQINAYK 191
>gi|318061240|ref|ZP_07979961.1| peptidyl-tRNA hydrolase [Streptomyces sp. SA3_actG]
gi|318075755|ref|ZP_07983087.1| peptidyl-tRNA hydrolase [Streptomyces sp. SA3_actF]
Length = 202
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 78/191 (40%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHA-EISEGQLD-----GLR 55
++VAGLGNPG EY NRHN+GFM D + + + ++ EG+L R
Sbjct: 13 WLVAGLGNPGPEYAGNRHNVGFMVADLLAARLGGRFKRAARARAQVVEGRLGVPGVSSTR 72
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
++ KP ++MNLSG + + +FYK+P LE + +HD+LD+D+G LRLK GGGD GHNGL
Sbjct: 73 VVVAKPLSYMNLSGGPVTALRDFYKVP-LERVVAVHDELDIDYGVLRLKLGGGDNGHNGL 131
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G Y R+R GIGRPP + VL +FSS ER L +D A ++ L +
Sbjct: 132 KSMTKAMGPAYHRVRFGIGRPPGRMQVADFVLKDFSSSERKELDYFVDRAADAVEALVTQ 191
Query: 176 EDVSFLNHIVS 186
S
Sbjct: 192 GLERAQGSYNS 202
>gi|329296258|ref|ZP_08253594.1| peptidyl-tRNA hydrolase [Plautia stali symbiont]
Length = 195
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + S H ++ KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAATRHNAGAWYVDLLCSRHNQSLKEEPKFFGYTARLSLAGEDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TF+NLSG+++ + FY++ E LV HD++DL G + K GGG GHNGLK I
Sbjct: 65 PTTFINLSGKAVAAMATFYRITP-EEILVAHDEMDLPPGVAKFKQGGGHGGHNGLKDIIS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D + VLG + E+ + +D R L K + +
Sbjct: 124 KLGNNNNFHRLRVGIGHPGDRNKVTGFVLGKAPASEQKLIDDAVDEAVRCTELWLKEDKI 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 KAMNRLHAFK 193
>gi|295101118|emb|CBK98663.1| peptidyl-tRNA hydrolase [Faecalibacterium prausnitzii L2-6]
Length = 192
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 64/186 (34%), Positives = 101/186 (54%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNP +Y RHN GF +D + K KF +G++DG + +L+KP
Sbjct: 7 WLIAGLGNPEPKYDGTRHNTGFAALDYLAGKWGISVSKTKFQGLWGQGEVDGHKVVLLKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG S+ + F+K+P+ ++ +V+ DD+ D G LR++ G GHNGLKSI +
Sbjct: 67 LTYMNLSGDSIGPLAGFFKIPS-DHVIVLCDDITQDPGKLRIRPSGSAGGHNGLKSIIAR 125
Query: 122 C-GKNYKRLRIGIG-RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+N+ R+RIG+G +P + VLG F + L +IA L+ +
Sbjct: 126 LGGENFPRIRIGVGAKPRPDYDLADWVLGKFPPDDAKALADRCPDIAAVATLIMDGKLGL 185
Query: 180 FLNHIV 185
+
Sbjct: 186 AQSKYN 191
>gi|262041842|ref|ZP_06015027.1| aminoacyl-tRNA hydrolase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259040834|gb|EEW41920.1| aminoacyl-tRNA hydrolase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 194
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + H P + KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLADRHRAPLREESKFFGYTSRINLAGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMATFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG + E+ + +D AR + K
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPLASEQKLIDDAVDEAARCTEIWLKDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|300864784|ref|ZP_07109634.1| Peptidyl-tRNA hydrolase [Oscillatoria sp. PCC 6506]
gi|300337188|emb|CBN54782.1| Peptidyl-tRNA hydrolase [Oscillatoria sp. PCC 6506]
Length = 211
Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 107/190 (56%), Gaps = 7/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDG-LRTILIK 60
++ GLGNP +Y RHNIGF +D + + + +KF AE EG + L+K
Sbjct: 15 LIVGLGNPEPKYNRTRHNIGFAAVDALANSWQISLSENRKFQAEFGEGMGPQREKIRLLK 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSGQ++ +++YKLP E+ L ++DD+DL G LRL+ G GHNG+KS
Sbjct: 75 PLTYMNLSGQAIRAAIDWYKLPP-ESVLAVYDDMDLPVGRLRLRLSGSAGGHNGMKSAIA 133
Query: 121 KCGKN-YKRLRIGIGRPPDTAH---IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G + + RLRIGIG+P +++ I HVLG FS E + ++ + ++ L K+
Sbjct: 134 HLGTDKFPRLRIGIGKPQSSSNDKETISHVLGKFSLEESQLMDKVLKLVVEAVELSQKQG 193
Query: 177 DVSFLNHIVS 186
++ S
Sbjct: 194 VEKAMSLYNS 203
>gi|170768141|ref|ZP_02902594.1| peptidyl-tRNA hydrolase [Escherichia albertii TW07627]
gi|170122907|gb|EDS91838.1| peptidyl-tRNA hydrolase [Escherichia albertii TW07627]
gi|323964702|gb|EGB60173.1| peptidyl-tRNA hydrolase [Escherichia coli M863]
gi|323977225|gb|EGB72312.1| peptidyl-tRNA hydrolase [Escherichia coli TW10509]
gi|327253894|gb|EGE65523.1| peptidyl-tRNA hydrolase [Escherichia coli STEC_7v]
Length = 194
Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTEGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|312864107|ref|ZP_07724342.1| aminoacyl-tRNA hydrolase [Streptococcus vestibularis F0396]
gi|311100339|gb|EFQ58547.1| aminoacyl-tRNA hydrolase [Streptococcus vestibularis F0396]
Length = 189
Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 72/180 (40%), Positives = 109/180 (60%), Gaps = 3/180 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y E RHN+GFM ID I ++K F AE++ L+G + +K
Sbjct: 3 KLVVGLGNPGSKYHETRHNVGFMAIDLIAKKLGLTFSEEKTFKAEVASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG ++ ++ +Y +P +E+++VI+DDLD++ G LR + G GHNG+KSI
Sbjct: 63 PTTFMNLSGLAVRALLAYYNIP-MEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + + R++IGIGRP ++ HVLG FS + +L +D + +L K D
Sbjct: 122 ETGTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYATILLTLDKVETALNHYLKTNDFE 181
>gi|163791050|ref|ZP_02185471.1| peptidyl-tRNA hydrolase [Carnobacterium sp. AT7]
gi|159873695|gb|EDP67778.1| peptidyl-tRNA hydrolase [Carnobacterium sp. AT7]
Length = 191
Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 106/190 (55%), Gaps = 3/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HNIGF+ +D H K KF A +E + + +L+K
Sbjct: 1 MKMIVGLGNPGSKYKDTKHNIGFITLDEFAFQHKMVFNKTKFEAIYAEAFIGSEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M+++ + +E+ +V++DDLDL G LRL+ G GHNG+KS+ +
Sbjct: 61 PQTFMNDSGRAVRPLMDYFNV-EIEDLIVVYDDLDLPVGKLRLRQKGSAGGHNGIKSLIQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
++ R+RIGI RP +++HVL F + LL I + +L +
Sbjct: 120 HLATADFNRVRIGIDRPLGKQTVVQHVLSGFPKNQHEELLLAIKDSVAALDYWIEGHSFS 179
Query: 179 SFLNHIVSVR 188
+N +
Sbjct: 180 DVMNQFNKKK 189
>gi|39546325|ref|NP_460739.2| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167553611|ref|ZP_02347360.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167993230|ref|ZP_02574325.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168233818|ref|ZP_02658876.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168237841|ref|ZP_02662899.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168259988|ref|ZP_02681961.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168462737|ref|ZP_02696668.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168820525|ref|ZP_02832525.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194444828|ref|YP_002041035.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194472071|ref|ZP_03078055.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194737518|ref|YP_002114815.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197250918|ref|YP_002146244.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197264625|ref|ZP_03164699.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|200391080|ref|ZP_03217691.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204927670|ref|ZP_03218871.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205352549|ref|YP_002226350.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856710|ref|YP_002243361.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213027308|ref|ZP_03341755.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213163410|ref|ZP_03349120.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213419000|ref|ZP_03352066.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213426488|ref|ZP_03359238.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213650575|ref|ZP_03380628.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|61230024|sp|P0A281|PTH_SALTY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|61230025|sp|P0A282|PTH_SALTI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119364641|sp|Q5PCR7|PTH_SALPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226709064|sp|B5F4G7|PTH_SALA4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226709066|sp|B5R3J2|PTH_SALEP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226709067|sp|B5R917|PTH_SALG2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238689759|sp|B4TXV1|PTH_SALSV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238693514|sp|B4SUH1|PTH_SALNS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|194403491|gb|ACF63713.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194458435|gb|EDX47274.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194713020|gb|ACF92241.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195634529|gb|EDX52881.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197214621|gb|ACH52018.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197242880|gb|EDY25500.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197289227|gb|EDY28594.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|199603525|gb|EDZ02071.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204323012|gb|EDZ08208.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205272330|emb|CAR37210.1| Peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205321993|gb|EDZ09832.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205328643|gb|EDZ15407.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205332138|gb|EDZ18902.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205342740|gb|EDZ29504.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205350578|gb|EDZ37209.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206708513|emb|CAR32834.1| Peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|267993734|gb|ACY88619.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158307|emb|CBW17806.1| Peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912773|dbj|BAJ36747.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320085715|emb|CBY95493.1| Peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321224414|gb|EFX49477.1| Peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322616779|gb|EFY13687.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322620410|gb|EFY17276.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625688|gb|EFY22507.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322626138|gb|EFY22948.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322633744|gb|EFY30484.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638898|gb|EFY35591.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640881|gb|EFY37530.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322644103|gb|EFY40648.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649174|gb|EFY45612.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322655333|gb|EFY51641.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322660909|gb|EFY57140.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322662793|gb|EFY59000.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322667977|gb|EFY64136.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322674261|gb|EFY70355.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322678542|gb|EFY74600.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322683201|gb|EFY79217.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686894|gb|EFY82872.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323195215|gb|EFZ80395.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323200193|gb|EFZ85279.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323204521|gb|EFZ89525.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323207362|gb|EFZ92310.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323213715|gb|EFZ98497.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323217347|gb|EGA02066.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323219236|gb|EGA03731.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323228013|gb|EGA12158.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231368|gb|EGA15481.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235808|gb|EGA19887.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240377|gb|EGA24420.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323245270|gb|EGA29270.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249841|gb|EGA33740.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252831|gb|EGA36667.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258534|gb|EGA42203.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323266743|gb|EGA50229.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323268949|gb|EGA52405.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 194
Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L+G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLA 182
Query: 179 SFLNHIVSVR 188
+ + + +
Sbjct: 183 KATSRLHTFK 192
>gi|309389993|gb|ADO77873.1| peptidyl-tRNA hydrolase [Halanaerobium praevalens DSM 2228]
Length = 185
Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 106/186 (56%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y + RHNIGFM I+ + + KF I + L + I+ +
Sbjct: 1 MKVIAGLGNPGQKYAQTRHNIGFMVINELAKRFKINS-SYKFDGLIGDFFLGSEKVIIFQ 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +MN SGQ + ++++++ + + EN LVIHDDLDLD G ++ K G GHNG+KSI
Sbjct: 60 PLQYMNKSGQPIYKLLDYFNIES-ENLLVIHDDLDLDLGKIKFKQNGSSGGHNGIKSIIN 118
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K +KRL+IGIGRPP+ + VL F S + + A ++ L+ K + +
Sbjct: 119 NLGTKEFKRLKIGIGRPPENVPVPDFVLTTFKSESKKIAEQTVAKAASAVELMLKEDIMK 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 AMNKYN 184
>gi|259908624|ref|YP_002648980.1| peptidyl-tRNA hydrolase [Erwinia pyrifoliae Ep1/96]
gi|224964246|emb|CAX55753.1| peptidyl-tRNA hydrolase [Erwinia pyrifoliae Ep1/96]
gi|283478596|emb|CAY74512.1| pth [Erwinia pyrifoliae DSM 12163]
gi|310767476|gb|ADP12426.1| peptidyl-tRNA hydrolase [Erwinia sp. Ejp617]
Length = 195
Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + H + KF + + G L+
Sbjct: 5 KLIVGLANPGAEYAATRHNAGAWYVDLLAERHNQSLKEENKFFGYTARLNIGGEDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++P E LV HD+LDL G + K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVAAMATFYRIP-AEEILVAHDELDLPPGVAKFKQGGGHGGHNGLKDIIS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P D ++ VLG + E+ + +D AR + K + +
Sbjct: 124 RLGNNLNFHRLRIGIGHPGDRNKVVGFVLGKPQAAEKTLIDNAVDEAARCTEVWLKEDRL 183
Query: 179 SFLNHIVSVR 188
++ + S R
Sbjct: 184 KAMSRLHSYR 193
>gi|116493281|ref|YP_805016.1| peptidyl-tRNA hydrolase [Pediococcus pentosaceus ATCC 25745]
gi|122265255|sp|Q03DZ8|PTH_PEDPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116103431|gb|ABJ68574.1| peptidyl-tRNA hydrolase [Pediococcus pentosaceus ATCC 25745]
Length = 185
Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 59/187 (31%), Positives = 103/187 (55%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY + RHN GFM +D + H +K + A I++ +++G + +L+K
Sbjct: 1 MKMIVGLGNIGKEYDKTRHNTGFMVVDELAKKHDINNFKVQSDALIADFRVNGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M++Y + +L + +V +DD+D+ G +RL+ G GHNG+KSI
Sbjct: 61 PTTYMNDSGRAVRPLMDYYDV-DLNDMIVAYDDMDMPVGKIRLRQKGSAGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G +++ R+R+GI P ++ +VLG F + + N +L
Sbjct: 120 HVGTQSFNRVRVGIDHPT-KESVVDYVLGKFRKEQITDFEIGVQNAVAALEDWTTIENFS 178
Query: 179 SFLNHIV 185
+N
Sbjct: 179 QLMNKYN 185
>gi|168334868|ref|ZP_02692990.1| peptidyl-tRNA hydrolase [Epulopiscium sp. 'N.t. morphotype B']
Length = 187
Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 69/188 (36%), Positives = 110/188 (58%), Gaps = 2/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y +HN GF +D + ++ K +F EG ++G + +L+K
Sbjct: 1 MKLVIGLGNPGAKYVATKHNAGFYAVDYLAHYYGIAMNKNRFRGISGEGIIEGEKILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+SL+E MNFYKL E LVI+DD + G +++K G GHNG+K+I E
Sbjct: 61 PLTFMNLSGESLIECMNFYKL-TAEEILVIYDDTAFETGVIKMKRTGSAGGHNGIKNIIE 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+N+ R RIGIGRPP+ ++ +VL F+ E + + + ++ ++ +
Sbjct: 120 HIKTQNFPRARIGIGRPPEGYLLVDYVLSKFTDMEIEKIKDSMPSFKDAVTTFVTKDIEA 179
Query: 180 FLNHIVSV 187
+N + ++
Sbjct: 180 AMNKLNAI 187
>gi|116333177|ref|YP_794704.1| peptidyl-tRNA hydrolase [Lactobacillus brevis ATCC 367]
gi|122270134|sp|Q03SZ9|PTH_LACBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116098524|gb|ABJ63673.1| peptidyl-tRNA hydrolase [Lactobacillus brevis ATCC 367]
Length = 185
Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN GFM +D H +K A G ++G + +++K
Sbjct: 1 MKMIVGLGNIGPQYDNTRHNTGFMVVDAFAQQHGIALTTRKMDARFGSGLVNGEKVLVVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ +M+++K+ ++ + +V+ DD+DL G +RL+ G GHNG+KSI
Sbjct: 61 PTTFMNESGRAVHPIMDYFKI-DVADVMVVQDDMDLPLGRIRLRDHGSAGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G +N+ RL++GI P ++ +VLG F++ +R D +L + +
Sbjct: 120 HVGTQNFGRLKVGIAHPQQH-TVVDYVLGKFTTDQRPVFNQAADRAVAALDDWVAGSDFM 178
Query: 179 SFLNHIV 185
+N
Sbjct: 179 QLMNQYN 185
>gi|329767250|ref|ZP_08258777.1| peptidyl-tRNA hydrolase [Gemella haemolysans M341]
gi|328836917|gb|EGF86564.1| peptidyl-tRNA hydrolase [Gemella haemolysans M341]
Length = 185
Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 62/186 (33%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGFM +D + K KF+AE + +G++ +L+K
Sbjct: 1 MKLIVGLGNPGKQYENTRHNIGFMVLDELAKSWNVSFDKTKFNAEYAIAYHNGIKYLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + +++++ + ++ DLD +LK G GHNG+KSI
Sbjct: 61 PTTYMNLSGEAVGKFYDYFEIDIEDILIIYD-DLDTKTANFKLKAKGSSGGHNGIKSIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGI RP ++ +VLG FS E + I + +K V
Sbjct: 120 HLGTEKFNRLKIGIDRPTPPMKVVDYVLGRFSKDEMSEIEKIYSKSVNCIEDFSKMSFVD 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 LMNKYN 185
>gi|161613718|ref|YP_001587683.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|189038163|sp|A9MVZ4|PTH_SALPB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|161363082|gb|ABX66850.1| hypothetical protein SPAB_01443 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 194
Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G ID + P ++ KF S L+G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYIDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLA 182
Query: 179 SFLNHIVSVR 188
+ + + +
Sbjct: 183 KATSRLHTFK 192
>gi|294462383|gb|ADE76740.1| unknown [Picea sitchensis]
Length = 256
Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG Y RHN+GF ID I + + A +G ++G +L KP
Sbjct: 62 WLLVGLGNPGKLYNGTRHNVGFEMIDTIAQAEGISVSRIQCRALFGKGHINGSPVMLAKP 121
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+S+ ++ +YK+P L L+I DD+DL F LRL GG GHNG+KS+ +
Sbjct: 122 QTFMNASGESVGPLVAYYKIP-LNQVLLIFDDMDLPFAKLRLLPKGGHGGHNGMKSVIDH 180
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RLRIGIGRPP I +VL F+ E+ L + + ++ +L +
Sbjct: 181 FKGNREFPRLRIGIGRPPGKMDPISYVLRPFTKGEQEELDLTLQDGLDAIRILINQGFDK 240
Query: 180 FLNHIVSVRK 189
+ +K
Sbjct: 241 SATIVNRAQK 250
>gi|238763007|ref|ZP_04623974.1| Peptidyl-tRNA hydrolase [Yersinia kristensenii ATCC 33638]
gi|238698765|gb|EEP91515.1| Peptidyl-tRNA hydrolase [Yersinia kristensenii ATCC 33638]
Length = 196
Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 100/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLAQRHNQQLKEESKFFGYTARLNLAGQDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 65 PSTFMNLSGKAVAAMAGFYRILP-EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P D + + VLG + E+ + ID R +L K +
Sbjct: 124 RLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQTLIDDAIDESIRCTEVLLKEDIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|145298187|ref|YP_001141028.1| peptidyl-tRNA hydrolase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142850959|gb|ABO89280.1| peptidyl-tRNA hydrolase [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 203
Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN G ++++ +H ++ KF + Q++G L+
Sbjct: 11 KLIVGLGNPGPEYAKTRHNAGAWYVEQLARWHNVSLREEPKFFGHTARIQVEGQDVRLLI 70
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK I
Sbjct: 71 PNTYMNLSGKAVAALARFYQIEP-EAMLVAHDELDLPPGIAKFKQGGGHGGHNGLKDIIA 129
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLR+GIG P + VL S E+ + +D R+ +L K++
Sbjct: 130 RMGNNNNFFRLRLGIGHPGAKELVAGFVLTKAPSSEQNLIDAALDKSLRATDILFKQDMT 189
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 190 KAMNRLHSFK 199
>gi|16760676|ref|NP_456293.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29141565|ref|NP_804907.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56413296|ref|YP_150371.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362221|ref|YP_002141858.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|16420313|gb|AAL20698.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16502972|emb|CAD02138.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137192|gb|AAO68756.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56127553|gb|AAV77059.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197093698|emb|CAR59170.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|261246969|emb|CBG24786.1| PTH [Salmonella enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|323130055|gb|ADX17485.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326627608|gb|EGE33951.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 202
Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L+G L+
Sbjct: 12 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLV 71
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 72 PTTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 130
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 131 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLA 190
Query: 179 SFLNHIVSVR 188
+ + + +
Sbjct: 191 KATSRLHTFK 200
>gi|302519767|ref|ZP_07272109.1| peptidyl-tRNA hydrolase [Streptomyces sp. SPB78]
gi|302428662|gb|EFL00478.1| peptidyl-tRNA hydrolase [Streptomyces sp. SPB78]
Length = 267
Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats.
Identities = 77/191 (40%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHA-EISEGQLD-----GLR 55
++VAGLGNPG EY NRHN+GF+ D + + + ++ EG+L R
Sbjct: 13 WLVAGLGNPGPEYAGNRHNVGFVVADLLAARLGGRFKRAARARAQVVEGRLGVPGVSSTR 72
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
++ KP ++MNLSG + + +FYK+P LE + +HD+LD+D+G LRLK GGGD GHNGL
Sbjct: 73 VVVAKPLSYMNLSGGPVTALRDFYKVP-LERVVAVHDELDIDYGVLRLKLGGGDNGHNGL 131
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G Y R+R GIGRPP + VL +FSS ER L +D A ++ L +
Sbjct: 132 KSMTKAMGPAYHRVRFGIGRPPGRMQVADFVLKDFSSSERKELDYFVDRAADAVEALVTQ 191
Query: 176 EDVSFLNHIVS 186
S
Sbjct: 192 GLERAQGSFNS 202
>gi|319945977|ref|ZP_08020226.1| aminoacyl-tRNA hydrolase [Streptococcus australis ATCC 700641]
gi|319747785|gb|EFW00030.1| aminoacyl-tRNA hydrolase [Streptococcus australis ATCC 700641]
Length = 189
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 107/187 (57%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM +D++ K F A+++ +DG + L+K
Sbjct: 3 KLIVGLGNPGDKYVETKHNVGFMLVDQLAKSLNLTFSHDKIFQADVTSTFIDGEKVFLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L +E+ +VI+DDLD++ G +RL+T G GHNG+KSI
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-EVEDLVVIYDDLDMEVGKIRLRTKGSAGGHNGIKSIIN 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + + R++IGIGRP ++ HVLG F + +L ID +L K +
Sbjct: 122 HIGTQTFNRIKIGIGRPKQGMSVVHHVLGKFDQDDYATILLAIDKSEEALRFYLKDGQFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQQYN 188
>gi|157835761|pdb|2PTH|A Chain A, Peptidyl-Trna Hydrolase From Escherichia Coli
Length = 193
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 3 KLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 63 PTTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 121
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 122 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 181
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 182 KATNRLHAFK 191
>gi|328478087|gb|EGF47960.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus MTCC 5462]
Length = 185
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HN+GFM +D + K +F A + ++D + L+K
Sbjct: 1 MKMIVGLGNPGRQYAGTKHNMGFMVVDGLAQRMGLTLNKLEFDAATATTRVDDEKVFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ ++M +Y++ L+ LV+HDD+DL G LRL+ G GHNG+K I
Sbjct: 61 PQTYMNASGRAVRQLMMYYQI-RLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + + RL+IGI P ++ VL F+ ++ + I +L
Sbjct: 120 ATGSDEFYRLKIGIQHP-QRQRVVDWVLTPFAKTDQPVIDAAITKADDALEDWLNGMPFA 178
Query: 179 SFLNHIV 185
+N
Sbjct: 179 QLMNKFN 185
>gi|323187434|gb|EFZ72743.1| peptidyl-tRNA hydrolase [Escherichia coli RN587/1]
Length = 194
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ + + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFFRI-SPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|241896608|ref|ZP_04783904.1| peptidyl-tRNA hydrolase [Weissella paramesenteroides ATCC 33313]
gi|241870089|gb|EER73840.1| peptidyl-tRNA hydrolase [Weissella paramesenteroides ATCC 33313]
Length = 188
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILI 59
M ++ GLGN G EY + RHN+GFM +D + + + HA +++ +++ + +L+
Sbjct: 1 MKMIVGLGNIGKEYDQTRHNVGFMTVDALADKYQATFKQDGAHHAFVADVRINNEKVLLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SGQ++ ++++YKL +L + LV+ DD+D+D G LRL+ G GHNG+KSI+
Sbjct: 61 KPTTYMNDSGQAVRPLVDYYKL-DLADLLVVQDDMDMDLGRLRLRQKGSAGGHNGIKSIA 119
Query: 120 EKCG-KNYKRLRIGIGRPPD-TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+ G + + RL+ GIG P ++ +VLG F E+ LL +D A +D
Sbjct: 120 NQLGTQKFNRLKFGIGHPAHVHQAVVDYVLGRFGKDEQPDLLAGLDKAVEIFEDFAAGKD 179
Query: 178 VSF-LNHIV 185
+ +N
Sbjct: 180 MPMLMNQFN 188
>gi|1093598|prf||2104267B peptidyl-tRNA hydrolase
Length = 194
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|332092244|gb|EGI97321.1| peptidyl-tRNA hydrolase [Shigella boydii 5216-82]
Length = 194
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|330828696|ref|YP_004391648.1| peptidyl-tRNA hydrolase [Aeromonas veronii B565]
gi|328803832|gb|AEB49031.1| Peptidyl-tRNA hydrolase [Aeromonas veronii B565]
Length = 198
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN G ++++ +H ++ KF + ++G L+
Sbjct: 6 KLIVGLGNPGPEYAKTRHNAGAWYVEQLARWHNVSLREEPKFFGHTARILVEGQDVRLLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK I
Sbjct: 66 PNTYMNLSGKAVAALARFYQIEP-EAILVAHDELDLPPGIAKFKQGGGHGGHNGLKDIIA 124
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P + VL S E+ + +D R+ +L K++
Sbjct: 125 KMGNNNNFFRLRLGIGHPGSKELVAGFVLTKAPSSEQNLIDAALDESLRATDILFKQDMT 184
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 185 KAMNRLHSFK 194
>gi|82776544|ref|YP_402893.1| peptidyl-tRNA hydrolase [Shigella dysenteriae Sd197]
gi|309789168|ref|ZP_07683761.1| peptidyl-tRNA hydrolase [Shigella dysenteriae 1617]
gi|119391007|sp|Q32H03|PTH_SHIDS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|81240692|gb|ABB61402.1| peptidyl-tRNA hydrolase [Shigella dysenteriae Sd197]
gi|308922922|gb|EFP68436.1| peptidyl-tRNA hydrolase [Shigella dysenteriae 1617]
Length = 194
Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ N + LV+HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFFRI-NPDEILVVHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID R +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAVRCTEMWFTDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|307137818|ref|ZP_07497174.1| peptidyl-tRNA hydrolase [Escherichia coli H736]
gi|331641733|ref|ZP_08342868.1| aminoacyl-tRNA hydrolase [Escherichia coli H736]
gi|331038531|gb|EGI10751.1| aminoacyl-tRNA hydrolase [Escherichia coli H736]
Length = 194
Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWFVDSLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|329122269|ref|ZP_08250857.1| aminoacyl-tRNA hydrolase [Haemophilus aegyptius ATCC 11116]
gi|327473830|gb|EGF19247.1| aminoacyl-tRNA hydrolase [Haemophilus aegyptius ATCC 11116]
Length = 194
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ + KF + + ++G L+
Sbjct: 5 KLIVGLGNPGEKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPPGTAKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P + +VL S +R L ++D + ++ K +
Sbjct: 124 QLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRNALEKVLDEATDCVEMIFKDGMI 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|293609065|ref|ZP_06691368.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829638|gb|EFF88000.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325121161|gb|ADY80684.1| peptidyl-tRNA hydrolase [Acinetobacter calcoaceticus PHEA-2]
Length = 193
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 2/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF I+++ + KFH G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFIEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS++ FY++ E L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 TTFMNRSGQSVVPFAKFYQIAP-EAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG S E+ + ID+ + LL + + +
Sbjct: 125 IGPNFHRLRIGIGHPGSKEKVSGHVLGKAPSSEQSLMDAAIDHALSKVKLLVQGQVPQAM 184
Query: 182 NHIVSVR 188
N I + +
Sbjct: 185 NQINAYK 191
>gi|261367662|ref|ZP_05980545.1| aminoacyl-tRNA hydrolase [Subdoligranulum variabile DSM 15176]
gi|282570454|gb|EFB75989.1| aminoacyl-tRNA hydrolase [Subdoligranulum variabile DSM 15176]
Length = 197
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 64/186 (34%), Positives = 93/186 (50%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNP +Y RHN GF +D + P K K+ Q+ + +L+KP
Sbjct: 12 WLIAGLGNPEPKYDGTRHNAGFEALDYLAEQWQCPLNKSKWQGLYGTTQVGEHKVVLLKP 71
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSGQS+ NFYK+P + +V+ DD+ G LR++ G GHNGLKSI
Sbjct: 72 LTYMNLSGQSIAPTANFYKIP-ANHIIVLCDDITQQPGHLRIRPHGSAGGHNGLKSIIAS 130
Query: 122 CGK-NYKRLRIGIG-RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+RIGIG +P + VLG +R + +I ++ LL
Sbjct: 131 LGTEEFSRIRIGIGAKPNPQYDLAVWVLGKLPPEDRKAMTDRYPDIEQACRLLMDDNLQY 190
Query: 180 FLNHIV 185
N
Sbjct: 191 AQNKFN 196
>gi|16272343|ref|NP_438556.1| peptidyl-tRNA hydrolase [Haemophilus influenzae Rd KW20]
gi|260580543|ref|ZP_05848371.1| peptidyl-tRNA hydrolase [Haemophilus influenzae RdAW]
gi|1172722|sp|P44682|PTH_HAEIN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|1573366|gb|AAC22053.1| peptidyl-tRNA hydrolase (pth) [Haemophilus influenzae Rd KW20]
gi|260092885|gb|EEW76820.1| peptidyl-tRNA hydrolase [Haemophilus influenzae RdAW]
Length = 194
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ + KF + + ++G L+
Sbjct: 5 KLIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPPGTAKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P + +VL S +R L ++D + ++ + V
Sbjct: 124 QLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEMIFRDGMV 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|33595507|ref|NP_883150.1| peptidyl-tRNA hydrolase [Bordetella parapertussis 12822]
gi|33599892|ref|NP_887452.1| peptidyl-tRNA hydrolase [Bordetella bronchiseptica RB50]
gi|46576755|sp|Q7W179|PTH_BORPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|46576761|sp|Q7WNY2|PTH_BORBR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|33565585|emb|CAE40228.1| peptidyl-tRNA hydrolase [Bordetella parapertussis]
gi|33567489|emb|CAE31402.1| peptidyl-tRNA hydrolase [Bordetella bronchiseptica RB50]
Length = 215
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 69/188 (36%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GF D + A +K F +++ + G +L+KP
Sbjct: 24 LIVGLGNPGPDYETTRHNAGFWLADHLADDLRTAFALEKGFFGMLAKARHAGENVVLLKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ V FYKL E LV+HD+LDL G +++K GGG AGHNGLK I
Sbjct: 84 ITYMNRSGQSVGAVARFYKLAP-EQVLVLHDELDLLPGQVKIKQGGGHAGHNGLKDIQAA 142
Query: 122 CG-KNYKRLRIGIGRP---PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G N+ RLRIGIG P + VL E+ + +ID +P + +
Sbjct: 143 LGSPNFWRLRIGIGHPRSLGLAQQVADFVLHPPRREEQQQIDTVIDRCRAVVPAMLAGDF 202
Query: 178 VSFLNHIV 185
+
Sbjct: 203 ALATRELH 210
>gi|15801433|ref|NP_287450.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 EDL933]
gi|15830963|ref|NP_309736.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. Sakai]
gi|16129167|ref|NP_415722.1| peptidyl-tRNA hydrolase [Escherichia coli str. K-12 substr. MG1655]
gi|26247527|ref|NP_753567.1| peptidyl-tRNA hydrolase [Escherichia coli CFT073]
gi|74312456|ref|YP_310875.1| peptidyl-tRNA hydrolase [Shigella sonnei Ss046]
gi|89108049|ref|AP_001829.1| peptidyl-tRNA hydrolase [Escherichia coli str. K-12 substr. W3110]
gi|91210425|ref|YP_540411.1| peptidyl-tRNA hydrolase [Escherichia coli UTI89]
gi|110641434|ref|YP_669164.1| peptidyl-tRNA hydrolase [Escherichia coli 536]
gi|110805209|ref|YP_688729.1| peptidyl-tRNA hydrolase [Shigella flexneri 5 str. 8401]
gi|157156333|ref|YP_001462456.1| peptidyl-tRNA hydrolase [Escherichia coli E24377A]
gi|157160709|ref|YP_001458027.1| peptidyl-tRNA hydrolase [Escherichia coli HS]
gi|168750763|ref|ZP_02775785.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4113]
gi|168756565|ref|ZP_02781572.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4401]
gi|168764412|ref|ZP_02789419.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4501]
gi|168771091|ref|ZP_02796098.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4486]
gi|168782558|ref|ZP_02807565.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4076]
gi|168787706|ref|ZP_02812713.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC869]
gi|168802106|ref|ZP_02827113.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC508]
gi|170020429|ref|YP_001725383.1| peptidyl-tRNA hydrolase [Escherichia coli ATCC 8739]
gi|170080832|ref|YP_001730152.1| peptidyl-tRNA hydrolase [Escherichia coli str. K-12 substr. DH10B]
gi|170681473|ref|YP_001743990.1| peptidyl-tRNA hydrolase [Escherichia coli SMS-3-5]
gi|188494692|ref|ZP_03001962.1| peptidyl-tRNA hydrolase [Escherichia coli 53638]
gi|191168523|ref|ZP_03030309.1| peptidyl-tRNA hydrolase [Escherichia coli B7A]
gi|191171008|ref|ZP_03032559.1| peptidyl-tRNA hydrolase [Escherichia coli F11]
gi|193066741|ref|ZP_03047766.1| peptidyl-tRNA hydrolase [Escherichia coli E22]
gi|193071180|ref|ZP_03052103.1| peptidyl-tRNA hydrolase [Escherichia coli E110019]
gi|194425799|ref|ZP_03058355.1| peptidyl-tRNA hydrolase [Escherichia coli B171]
gi|194437104|ref|ZP_03069203.1| peptidyl-tRNA hydrolase [Escherichia coli 101-1]
gi|195938853|ref|ZP_03084235.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4024]
gi|208806611|ref|ZP_03248948.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4206]
gi|208815492|ref|ZP_03256671.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4045]
gi|208822157|ref|ZP_03262476.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4042]
gi|209398573|ref|YP_002270138.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4115]
gi|209918445|ref|YP_002292529.1| peptidyl-tRNA hydrolase [Escherichia coli SE11]
gi|215486436|ref|YP_002328867.1| peptidyl-tRNA hydrolase [Escherichia coli O127:H6 str. E2348/69]
gi|217328364|ref|ZP_03444446.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. TW14588]
gi|218553758|ref|YP_002386671.1| peptidyl-tRNA hydrolase [Escherichia coli IAI1]
gi|218558133|ref|YP_002391046.1| peptidyl-tRNA hydrolase [Escherichia coli S88]
gi|218689151|ref|YP_002397363.1| peptidyl-tRNA hydrolase [Escherichia coli ED1a]
gi|218694718|ref|YP_002402385.1| peptidyl-tRNA hydrolase [Escherichia coli 55989]
gi|218699911|ref|YP_002407540.1| peptidyl-tRNA hydrolase [Escherichia coli IAI39]
gi|227886374|ref|ZP_04004179.1| aminoacyl-tRNA hydrolase [Escherichia coli 83972]
gi|237705166|ref|ZP_04535647.1| peptidyl-tRNA hydrolase [Escherichia sp. 3_2_53FAA]
gi|238900435|ref|YP_002926231.1| peptidyl-tRNA hydrolase [Escherichia coli BW2952]
gi|253773797|ref|YP_003036628.1| peptidyl-tRNA hydrolase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254161286|ref|YP_003044394.1| peptidyl-tRNA hydrolase [Escherichia coli B str. REL606]
gi|254792674|ref|YP_003077511.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. TW14359]
gi|256018546|ref|ZP_05432411.1| peptidyl-tRNA hydrolase [Shigella sp. D9]
gi|256023119|ref|ZP_05436984.1| peptidyl-tRNA hydrolase [Escherichia sp. 4_1_40B]
gi|260843496|ref|YP_003221274.1| peptidyl-tRNA hydrolase [Escherichia coli O103:H2 str. 12009]
gi|260854865|ref|YP_003228756.1| peptidyl-tRNA hydrolase [Escherichia coli O26:H11 str. 11368]
gi|260867609|ref|YP_003234011.1| peptidyl-tRNA hydrolase [Escherichia coli O111:H- str. 11128]
gi|261224936|ref|ZP_05939217.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. FRIK2000]
gi|261257207|ref|ZP_05949740.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. FRIK966]
gi|291282229|ref|YP_003499047.1| Peptidyl-tRNA hydrolase [Escherichia coli O55:H7 str. CB9615]
gi|293409591|ref|ZP_06653167.1| peptidyl-tRNA hydrolase [Escherichia coli B354]
gi|293414481|ref|ZP_06657130.1| peptidyl-tRNA hydrolase [Escherichia coli B185]
gi|293433520|ref|ZP_06661948.1| peptidyl-tRNA hydrolase [Escherichia coli B088]
gi|297516813|ref|ZP_06935199.1| peptidyl-tRNA hydrolase [Escherichia coli OP50]
gi|300816895|ref|ZP_07097115.1| peptidyl-tRNA hydrolase [Escherichia coli MS 107-1]
gi|300821026|ref|ZP_07101175.1| peptidyl-tRNA hydrolase [Escherichia coli MS 119-7]
gi|300921830|ref|ZP_07137987.1| peptidyl-tRNA hydrolase [Escherichia coli MS 182-1]
gi|300928250|ref|ZP_07143787.1| peptidyl-tRNA hydrolase [Escherichia coli MS 187-1]
gi|300939560|ref|ZP_07154217.1| peptidyl-tRNA hydrolase [Escherichia coli MS 21-1]
gi|300951671|ref|ZP_07165495.1| peptidyl-tRNA hydrolase [Escherichia coli MS 116-1]
gi|300955603|ref|ZP_07167961.1| peptidyl-tRNA hydrolase [Escherichia coli MS 175-1]
gi|300971927|ref|ZP_07171715.1| peptidyl-tRNA hydrolase [Escherichia coli MS 45-1]
gi|300996001|ref|ZP_07181335.1| peptidyl-tRNA hydrolase [Escherichia coli MS 200-1]
gi|301017236|ref|ZP_07182017.1| peptidyl-tRNA hydrolase [Escherichia coli MS 69-1]
gi|301029494|ref|ZP_07192575.1| peptidyl-tRNA hydrolase [Escherichia coli MS 196-1]
gi|301046853|ref|ZP_07193970.1| peptidyl-tRNA hydrolase [Escherichia coli MS 185-1]
gi|301327080|ref|ZP_07220362.1| peptidyl-tRNA hydrolase [Escherichia coli MS 78-1]
gi|301648143|ref|ZP_07247896.1| peptidyl-tRNA hydrolase [Escherichia coli MS 146-1]
gi|306813898|ref|ZP_07448071.1| peptidyl-tRNA hydrolase [Escherichia coli NC101]
gi|307310041|ref|ZP_07589691.1| peptidyl-tRNA hydrolase [Escherichia coli W]
gi|312966444|ref|ZP_07780666.1| peptidyl-tRNA hydrolase [Escherichia coli 2362-75]
gi|312971391|ref|ZP_07785566.1| peptidyl-tRNA hydrolase [Escherichia coli 1827-70]
gi|331646522|ref|ZP_08347625.1| aminoacyl-tRNA hydrolase [Escherichia coli M605]
gi|331657255|ref|ZP_08358217.1| aminoacyl-tRNA hydrolase [Escherichia coli TA206]
gi|331667588|ref|ZP_08368452.1| aminoacyl-tRNA hydrolase [Escherichia coli TA271]
gi|331672739|ref|ZP_08373525.1| aminoacyl-tRNA hydrolase [Escherichia coli TA280]
gi|331676984|ref|ZP_08377680.1| aminoacyl-tRNA hydrolase [Escherichia coli H591]
gi|331682693|ref|ZP_08383312.1| aminoacyl-tRNA hydrolase [Escherichia coli H299]
gi|67471520|sp|P0A7D1|PTH_ECOLI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|67471521|sp|P0A7D2|PTH_ECOL6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|67471524|sp|P0A7D3|PTH_ECO57 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390937|sp|Q0TIG6|PTH_ECOL5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390938|sp|Q1RCN4|PTH_ECOUT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391008|sp|Q3Z0S2|PTH_SHISS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|122957492|sp|Q0T5J1|PTH_SHIF8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|167011992|sp|A7ZKX7|PTH_ECO24 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|167011993|sp|A7ZZE0|PTH_ECOHS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038290|sp|B1IU89|PTH_ECOLC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226694252|sp|B5YXM2|PTH_ECO5E RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226694253|sp|B6I9R9|PTH_ECOSE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226723249|sp|B7MKA6|PTH_ECO45 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226723250|sp|B7NUX0|PTH_ECO7I RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226723251|sp|B7LXB9|PTH_ECO8A RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226723253|sp|B1LH96|PTH_ECOSM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|229470296|sp|B1XAP5|PTH_ECODH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783867|sp|B7UQ92|PTH_ECO27 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783868|sp|B7LGW4|PTH_ECO55 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783869|sp|B7MTY8|PTH_ECO81 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|259535173|sp|C4ZTP5|PTH_ECOBW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|12514917|gb|AAG56062.1|AE005338_2 peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EDL933]
gi|26107928|gb|AAN80127.1|AE016759_401 Peptidyl-tRNA hydrolase [Escherichia coli CFT073]
gi|581202|emb|CAA43945.1| peptidyl-tRNA hydrolase [Escherichia coli K-12]
gi|1651597|dbj|BAA36062.1| peptidyl-tRNA hydrolase [Escherichia coli str. K12 substr. W3110]
gi|1787455|gb|AAC74288.1| peptidyl-tRNA hydrolase [Escherichia coli str. K-12 substr. MG1655]
gi|13361174|dbj|BAB35132.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. Sakai]
gi|73855933|gb|AAZ88640.1| peptidyl-tRNA hydrolase [Shigella sonnei Ss046]
gi|91071999|gb|ABE06880.1| peptidyl-tRNA hydrolase [Escherichia coli UTI89]
gi|110343026|gb|ABG69263.1| peptidyl-tRNA hydrolase [Escherichia coli 536]
gi|110614757|gb|ABF03424.1| peptidyl-tRNA hydrolase [Shigella flexneri 5 str. 8401]
gi|157066389|gb|ABV05644.1| peptidyl-tRNA hydrolase [Escherichia coli HS]
gi|157078363|gb|ABV18071.1| peptidyl-tRNA hydrolase [Escherichia coli E24377A]
gi|169755357|gb|ACA78056.1| Aminoacyl-tRNA hydrolase [Escherichia coli ATCC 8739]
gi|169888667|gb|ACB02374.1| peptidyl-tRNA hydrolase [Escherichia coli str. K-12 substr. DH10B]
gi|170519191|gb|ACB17369.1| peptidyl-tRNA hydrolase [Escherichia coli SMS-3-5]
gi|188015067|gb|EDU53189.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4113]
gi|188489891|gb|EDU64994.1| peptidyl-tRNA hydrolase [Escherichia coli 53638]
gi|188999990|gb|EDU68976.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4076]
gi|189356406|gb|EDU74825.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4401]
gi|189360056|gb|EDU78475.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4486]
gi|189365581|gb|EDU83997.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4501]
gi|189372477|gb|EDU90893.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC869]
gi|189375858|gb|EDU94274.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC508]
gi|190901421|gb|EDV61184.1| peptidyl-tRNA hydrolase [Escherichia coli B7A]
gi|190908740|gb|EDV68328.1| peptidyl-tRNA hydrolase [Escherichia coli F11]
gi|192925611|gb|EDV80280.1| peptidyl-tRNA hydrolase [Escherichia coli E22]
gi|192955512|gb|EDV85992.1| peptidyl-tRNA hydrolase [Escherichia coli E110019]
gi|194415854|gb|EDX32120.1| peptidyl-tRNA hydrolase [Escherichia coli B171]
gi|194424087|gb|EDX40075.1| peptidyl-tRNA hydrolase [Escherichia coli 101-1]
gi|208726412|gb|EDZ76013.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4206]
gi|208732140|gb|EDZ80828.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4045]
gi|208737642|gb|EDZ85325.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4042]
gi|209159973|gb|ACI37406.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4115]
gi|209772598|gb|ACI84611.1| peptidyl-tRNA hydrolase [Escherichia coli]
gi|209772600|gb|ACI84612.1| peptidyl-tRNA hydrolase [Escherichia coli]
gi|209772602|gb|ACI84613.1| peptidyl-tRNA hydrolase [Escherichia coli]
gi|209772604|gb|ACI84614.1| peptidyl-tRNA hydrolase [Escherichia coli]
gi|209772606|gb|ACI84615.1| peptidyl-tRNA hydrolase [Escherichia coli]
gi|209911704|dbj|BAG76778.1| peptidyl-tRNA hydrolase [Escherichia coli SE11]
gi|215264508|emb|CAS08875.1| peptidyl-tRNA hydrolase [Escherichia coli O127:H6 str. E2348/69]
gi|217318791|gb|EEC27217.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. TW14588]
gi|218351450|emb|CAU97158.1| peptidyl-tRNA hydrolase [Escherichia coli 55989]
gi|218360526|emb|CAQ98084.1| peptidyl-tRNA hydrolase [Escherichia coli IAI1]
gi|218364902|emb|CAR02598.1| peptidyl-tRNA hydrolase [Escherichia coli S88]
gi|218369897|emb|CAR17672.1| peptidyl-tRNA hydrolase [Escherichia coli IAI39]
gi|218426715|emb|CAR07552.1| peptidyl-tRNA hydrolase [Escherichia coli ED1a]
gi|222033003|emb|CAP75743.1| Peptidyl-tRNA hydrolase [Escherichia coli LF82]
gi|226899923|gb|EEH86182.1| peptidyl-tRNA hydrolase [Escherichia sp. 3_2_53FAA]
gi|227836578|gb|EEJ47044.1| aminoacyl-tRNA hydrolase [Escherichia coli 83972]
gi|238861995|gb|ACR63993.1| peptidyl-tRNA hydrolase [Escherichia coli BW2952]
gi|242376983|emb|CAQ31706.1| peptidyl-tRNA hydrolase [Escherichia coli BL21(DE3)]
gi|253324841|gb|ACT29443.1| peptidyl-tRNA hydrolase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253973187|gb|ACT38858.1| peptidyl-tRNA hydrolase [Escherichia coli B str. REL606]
gi|253977401|gb|ACT43071.1| peptidyl-tRNA hydrolase [Escherichia coli BL21(DE3)]
gi|254592074|gb|ACT71435.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. TW14359]
gi|257753514|dbj|BAI25016.1| peptidyl-tRNA hydrolase [Escherichia coli O26:H11 str. 11368]
gi|257758643|dbj|BAI30140.1| peptidyl-tRNA hydrolase [Escherichia coli O103:H2 str. 12009]
gi|257763965|dbj|BAI35460.1| peptidyl-tRNA hydrolase [Escherichia coli O111:H- str. 11128]
gi|260449661|gb|ACX40083.1| Aminoacyl-tRNA hydrolase [Escherichia coli DH1]
gi|284921016|emb|CBG34081.1| Peptidyl-tRNA hydrolase [Escherichia coli 042]
gi|290762102|gb|ADD56063.1| Peptidyl-tRNA hydrolase [Escherichia coli O55:H7 str. CB9615]
gi|291324339|gb|EFE63761.1| peptidyl-tRNA hydrolase [Escherichia coli B088]
gi|291434539|gb|EFF07512.1| peptidyl-tRNA hydrolase [Escherichia coli B185]
gi|291470059|gb|EFF12543.1| peptidyl-tRNA hydrolase [Escherichia coli B354]
gi|294489958|gb|ADE88714.1| peptidyl-tRNA hydrolase [Escherichia coli IHE3034]
gi|299877602|gb|EFI85813.1| peptidyl-tRNA hydrolase [Escherichia coli MS 196-1]
gi|300301221|gb|EFJ57606.1| peptidyl-tRNA hydrolase [Escherichia coli MS 185-1]
gi|300304608|gb|EFJ59128.1| peptidyl-tRNA hydrolase [Escherichia coli MS 200-1]
gi|300317532|gb|EFJ67316.1| peptidyl-tRNA hydrolase [Escherichia coli MS 175-1]
gi|300400367|gb|EFJ83905.1| peptidyl-tRNA hydrolase [Escherichia coli MS 69-1]
gi|300411052|gb|EFJ94590.1| peptidyl-tRNA hydrolase [Escherichia coli MS 45-1]
gi|300421756|gb|EFK05067.1| peptidyl-tRNA hydrolase [Escherichia coli MS 182-1]
gi|300449117|gb|EFK12737.1| peptidyl-tRNA hydrolase [Escherichia coli MS 116-1]
gi|300455564|gb|EFK19057.1| peptidyl-tRNA hydrolase [Escherichia coli MS 21-1]
gi|300463719|gb|EFK27212.1| peptidyl-tRNA hydrolase [Escherichia coli MS 187-1]
gi|300526325|gb|EFK47394.1| peptidyl-tRNA hydrolase [Escherichia coli MS 119-7]
gi|300530669|gb|EFK51731.1| peptidyl-tRNA hydrolase [Escherichia coli MS 107-1]
gi|300846333|gb|EFK74093.1| peptidyl-tRNA hydrolase [Escherichia coli MS 78-1]
gi|301073729|gb|EFK88535.1| peptidyl-tRNA hydrolase [Escherichia coli MS 146-1]
gi|305852535|gb|EFM52983.1| peptidyl-tRNA hydrolase [Escherichia coli NC101]
gi|306909759|gb|EFN40253.1| peptidyl-tRNA hydrolase [Escherichia coli W]
gi|307553259|gb|ADN46034.1| peptidyl-tRNA hydrolase [Escherichia coli ABU 83972]
gi|307627273|gb|ADN71577.1| peptidyl-tRNA hydrolase [Escherichia coli UM146]
gi|309701503|emb|CBJ00810.1| Peptidyl-tRNA hydrolase [Escherichia coli ETEC H10407]
gi|310335988|gb|EFQ01188.1| peptidyl-tRNA hydrolase [Escherichia coli 1827-70]
gi|312288897|gb|EFR16795.1| peptidyl-tRNA hydrolase [Escherichia coli 2362-75]
gi|312945834|gb|ADR26661.1| peptidyl-tRNA hydrolase [Escherichia coli O83:H1 str. NRG 857C]
gi|315060455|gb|ADT74782.1| peptidyl-tRNA hydrolase [Escherichia coli W]
gi|315135840|dbj|BAJ42999.1| peptidyl-tRNA hydrolase [Escherichia coli DH1]
gi|315288575|gb|EFU47973.1| peptidyl-tRNA hydrolase [Escherichia coli MS 110-3]
gi|315290782|gb|EFU50154.1| peptidyl-tRNA hydrolase [Escherichia coli MS 153-1]
gi|315297338|gb|EFU56618.1| peptidyl-tRNA hydrolase [Escherichia coli MS 16-3]
gi|315615954|gb|EFU96580.1| peptidyl-tRNA hydrolase [Escherichia coli 3431]
gi|320174894|gb|EFW50013.1| Peptidyl-tRNA hydrolase [Shigella dysenteriae CDC 74-1112]
gi|320181789|gb|EFW56699.1| Peptidyl-tRNA hydrolase [Shigella boydii ATCC 9905]
gi|320185607|gb|EFW60369.1| Peptidyl-tRNA hydrolase [Shigella flexneri CDC 796-83]
gi|320187996|gb|EFW62663.1| Peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC1212]
gi|320195786|gb|EFW70411.1| Peptidyl-tRNA hydrolase [Escherichia coli WV_060327]
gi|320637356|gb|EFX07163.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. G5101]
gi|320643218|gb|EFX12419.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H- str. 493-89]
gi|320648155|gb|EFX16831.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H- str. H 2687]
gi|320653989|gb|EFX22063.1| peptidyl-tRNA hydrolase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320659468|gb|EFX27037.1| peptidyl-tRNA hydrolase [Escherichia coli O55:H7 str. USDA 5905]
gi|320664605|gb|EFX31756.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. LSU-61]
gi|323153198|gb|EFZ39460.1| peptidyl-tRNA hydrolase [Escherichia coli EPECa14]
gi|323162271|gb|EFZ48129.1| peptidyl-tRNA hydrolase [Escherichia coli E128010]
gi|323168374|gb|EFZ54055.1| peptidyl-tRNA hydrolase [Shigella sonnei 53G]
gi|323172443|gb|EFZ58080.1| peptidyl-tRNA hydrolase [Escherichia coli LT-68]
gi|323185634|gb|EFZ70995.1| peptidyl-tRNA hydrolase [Escherichia coli 1357]
gi|323378981|gb|ADX51249.1| peptidyl-tRNA hydrolase [Escherichia coli KO11]
gi|323937925|gb|EGB34189.1| peptidyl-tRNA hydrolase [Escherichia coli E1520]
gi|323942483|gb|EGB38651.1| peptidyl-tRNA hydrolase [Escherichia coli E482]
gi|323947513|gb|EGB43517.1| peptidyl-tRNA hydrolase [Escherichia coli H120]
gi|323949679|gb|EGB45565.1| peptidyl-tRNA hydrolase [Escherichia coli H252]
gi|323953941|gb|EGB49740.1| peptidyl-tRNA hydrolase [Escherichia coli H263]
gi|323962782|gb|EGB58360.1| peptidyl-tRNA hydrolase [Escherichia coli H489]
gi|323973398|gb|EGB68585.1| peptidyl-tRNA hydrolase [Escherichia coli TA007]
gi|324006007|gb|EGB75226.1| peptidyl-tRNA hydrolase [Escherichia coli MS 57-2]
gi|324015646|gb|EGB84865.1| peptidyl-tRNA hydrolase [Escherichia coli MS 60-1]
gi|324017546|gb|EGB86765.1| peptidyl-tRNA hydrolase [Escherichia coli MS 117-3]
gi|324117248|gb|EGC11155.1| peptidyl-tRNA hydrolase [Escherichia coli E1167]
gi|326342752|gb|EGD66522.1| Peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. 1044]
gi|326346395|gb|EGD70132.1| Peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. 1125]
gi|330911071|gb|EGH39581.1| peptidyl-tRNA hydrolase [Escherichia coli AA86]
gi|331045274|gb|EGI17401.1| aminoacyl-tRNA hydrolase [Escherichia coli M605]
gi|331055503|gb|EGI27512.1| aminoacyl-tRNA hydrolase [Escherichia coli TA206]
gi|331065173|gb|EGI37068.1| aminoacyl-tRNA hydrolase [Escherichia coli TA271]
gi|331069960|gb|EGI41329.1| aminoacyl-tRNA hydrolase [Escherichia coli TA280]
gi|331075673|gb|EGI46971.1| aminoacyl-tRNA hydrolase [Escherichia coli H591]
gi|331080324|gb|EGI51503.1| aminoacyl-tRNA hydrolase [Escherichia coli H299]
gi|332094742|gb|EGI99786.1| peptidyl-tRNA hydrolase [Shigella boydii 3594-74]
gi|332101958|gb|EGJ05304.1| peptidyl-tRNA hydrolase [Shigella sp. D9]
Length = 194
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|330429326|gb|AEC20660.1| peptidyl-tRNA hydrolase [Pusillimonas sp. T7-7]
Length = 198
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 72/188 (38%), Positives = 97/188 (51%), Gaps = 6/188 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN GF D + +K F A +++G+ +G I+ KP
Sbjct: 7 LIIGLGNPGPEYEATRHNAGFWLADHLADDLKASFTLEKAFSAWVAKGRYEGEAVIIAKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ+ ++ FYKL E LV+HD+LDL G ++LK GGG AGHNGL+ I
Sbjct: 67 ATFMNRSGQAAGALLRFYKLVP-EQVLVLHDELDLLPGQVKLKRGGGHAGHNGLRDIQSA 125
Query: 122 C-GKNYKRLRIGIGRP---PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
++ RLRIGIG P + VL E + +ID S P L + E
Sbjct: 126 FSSPDFWRLRIGIGHPRTLGLAQQVAAFVLNPPRREELTQIEGVIDRCRASAPALLRGEF 185
Query: 178 VSFLNHIV 185
N +
Sbjct: 186 AQATNQLH 193
>gi|238913684|ref|ZP_04657521.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
Length = 194
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L+G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLGN E+ + ID AR L K
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGNPPVSEQKLIDEAIDEAARCTELWFKEGLA 182
Query: 179 SFLNHIVSVR 188
+ + + +
Sbjct: 183 KATSRLHTFK 192
>gi|168038662|ref|XP_001771819.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676950|gb|EDQ63427.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 252
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG ++ RHNIGF ID I P + + + +G + +L KP
Sbjct: 59 WLIVGLGNPGIKFEGTRHNIGFDMIDAIAEAENIPLRMIQHKSLLGKGYIGTTPVLLAKP 118
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S+ + +YK+P E L I DDLDL F TL+L GG GHNG++S+ +
Sbjct: 119 QTYMNLSGESVGPLSAYYKIPR-ERVLAIFDDLDLQFATLKLLPKGGHGGHNGMRSLIDH 177
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ RLR GIGRP + +VL FSS E L ++ + LL +
Sbjct: 178 FGGKQDFPRLRFGIGRPAGSMPPSAYVLQKFSSKEIEELDVVLQRGVEGVRLLTTQGLEK 237
Query: 180 FLNHIVSVRK 189
++ K
Sbjct: 238 AVSTWNKKSK 247
>gi|119390959|sp|Q1H3J3|PTH_METFK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 192
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 72/190 (37%), Positives = 106/190 (55%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGL-RTILIK 60
+ GLGNPG +Y + RHN GF ID++ + KF G+L+G T L+K
Sbjct: 6 LFVGLGNPGAQYEDTRHNAGFWWIDQLCAQTASKTTLEAKFFGL--SGRLNGHADTWLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ + FYK+P E LV+HD+LDL G RLK GGG +GHNGLK I+
Sbjct: 64 PTTFMNASGRAVAALARFYKIP-AEQILVVHDELDLPPGAARLKKGGGHSGHNGLKDIAA 122
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G ++ RLR+GIG P D + ++ +VL E + +D+ LP L + +
Sbjct: 123 QLGTNDFWRLRLGIGHPGDRSAVVNYVLNAPLRDEMQQIAYAMDDSMLVLPQLLEGKFEE 182
Query: 180 FLNHIVSVRK 189
+ + + K
Sbjct: 183 AMLKLHTKTK 192
>gi|91775029|ref|YP_544785.1| peptidyl-tRNA hydrolase [Methylobacillus flagellatus KT]
gi|91709016|gb|ABE48944.1| peptidyl-tRNA hydrolase [Methylobacillus flagellatus KT]
Length = 213
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 72/190 (37%), Positives = 106/190 (55%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGL-RTILIK 60
+ GLGNPG +Y + RHN GF ID++ + KF G+L+G T L+K
Sbjct: 27 LFVGLGNPGAQYEDTRHNAGFWWIDQLCAQTASKTTLEAKFFGL--SGRLNGHADTWLLK 84
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ + FYK+P E LV+HD+LDL G RLK GGG +GHNGLK I+
Sbjct: 85 PTTFMNASGRAVAALARFYKIP-AEQILVVHDELDLPPGAARLKKGGGHSGHNGLKDIAA 143
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G ++ RLR+GIG P D + ++ +VL E + +D+ LP L + +
Sbjct: 144 QLGTNDFWRLRLGIGHPGDRSAVVNYVLNAPLRDEMQQIAYAMDDSMLVLPQLLEGKFEE 203
Query: 180 FLNHIVSVRK 189
+ + + K
Sbjct: 204 AMLKLHTKTK 213
>gi|312866881|ref|ZP_07727094.1| aminoacyl-tRNA hydrolase [Streptococcus parasanguinis F0405]
gi|311097664|gb|EFQ55895.1| aminoacyl-tRNA hydrolase [Streptococcus parasanguinis F0405]
Length = 189
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 107/187 (57%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM +D++ K F A+I+ L+G + +K
Sbjct: 3 KLIVGLGNPGDKYVETKHNVGFMLVDQMAKSLNLTFSHDKIFQADIASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIN 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL-PLLAKREDV 178
G + + R++IGIGRP ++ HVLG F + +L ID + ++ L +
Sbjct: 122 HIGTQTFYRIKIGIGRPKQGMSVVHHVLGKFDKDDYITILQTIDRVEEAVNDYLVEENFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 RSMQKYN 188
>gi|319779116|ref|YP_004130029.1| Peptidyl-tRNA hydrolase [Taylorella equigenitalis MCE9]
gi|317109140|gb|ADU91886.1| Peptidyl-tRNA hydrolase [Taylorella equigenitalis MCE9]
Length = 264
Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 101/189 (53%), Gaps = 6/189 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILI 59
+ ++ GLGNPG EY RHN GF +DR+ H ++ FH +++ G L+
Sbjct: 5 LKLIVGLGNPGPEYEHTRHNAGFWFVDRLALKHGCNWNQESAFHGYMAKMPSAGGSIFLL 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+++ V +FYK+ ++ LV HD+LDL ++LK GGG AGHNGL+ I+
Sbjct: 65 KPSTYMNLSGRAVQAVCHFYKIA-VDEVLVAHDELDLPINEIKLKKGGGHAGHNGLRDIT 123
Query: 120 EKC-GKNYKRLRIGIGRPPDT---AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+ + RLRIGI P + +VL + E LL +D ++ L K
Sbjct: 124 KAMASPEFWRLRIGIDHPIKRNMVQPVADYVLHRPNLEEFEQLLMSVDRGVEAVDYLIKG 183
Query: 176 EDVSFLNHI 184
+ + +
Sbjct: 184 DKQKAITTL 192
>gi|68248997|ref|YP_248109.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 86-028NP]
gi|81336591|sp|Q4QNE8|PTH_HAEI8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68057196|gb|AAX87449.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 86-028NP]
Length = 194
Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ + KF + + ++G L+
Sbjct: 5 KLIVGLGNPGEKYADTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P + +VL S +R L ++D + ++ K +
Sbjct: 124 QLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEIIFKDGMI 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|289551699|ref|YP_003472603.1| Peptidyl-tRNA hydrolase [Staphylococcus lugdunensis HKU09-01]
gi|315660331|ref|ZP_07913184.1| aminoacyl-tRNA hydrolase [Staphylococcus lugdunensis M23590]
gi|289181230|gb|ADC88475.1| Peptidyl-tRNA hydrolase [Staphylococcus lugdunensis HKU09-01]
gi|315494620|gb|EFU82962.1| aminoacyl-tRNA hydrolase [Staphylococcus lugdunensis M23590]
Length = 190
Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 105/187 (56%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF +D + + F K+KF + ++ + + I+
Sbjct: 1 MKCIVGLGNIGKRFEHTRHNIGFEVVDYLLDKYNFNLDKQKFKGAYTIERIGNDKVMFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSGQ++ +M++Y + ++ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGQAVGPLMDYYNVA-IDELIVLYDDLDLNQGQVRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA-KREDV 178
G +KR+RIG+GRP + + +VL FS E + ++++ A+++
Sbjct: 120 HLGTEQFKRIRIGVGRPTNGMSVPDYVLQKFSKEEMMTMDHVVEHAAQAVEAFIDTSRFD 179
Query: 179 SFLNHIV 185
+N+
Sbjct: 180 HVMNNFN 186
>gi|297587542|ref|ZP_06946186.1| aminoacyl-tRNA hydrolase [Finegoldia magna ATCC 53516]
gi|297574231|gb|EFH92951.1| aminoacyl-tRNA hydrolase [Finegoldia magna ATCC 53516]
Length = 190
Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 104/186 (55%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y RHN GFM ID + K KF + I EG + + IL+K
Sbjct: 1 MYLIAGLGNPGSKYEYTRHNAGFMVIDDLAKKLNIKVNKLKFKSLIGEGFIGNEKVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++L+ N+Y L + EN +VI DD+D+ FGT+R+K G HNGLKSI
Sbjct: 61 PSTYMNDSGKAILDCFNYYNL-SAENLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ R+++ +G+ + + VL FS E L ID + + + +
Sbjct: 120 LIQSQDFARIKVSVGQNDNNYDLKDFVLSQFSKKEFEVLKKEIDMSSDACIKIVEENVDY 179
Query: 180 FLNHIV 185
+N+
Sbjct: 180 AMNNFN 185
>gi|229825976|ref|ZP_04452045.1| hypothetical protein GCWU000182_01340 [Abiotrophia defectiva ATCC
49176]
gi|229789718|gb|EEP25832.1| hypothetical protein GCWU000182_01340 [Abiotrophia defectiva ATCC
49176]
Length = 192
Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 63/189 (33%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNP +Y RHNIGF I + + K F +++ +G +DG + +L+K
Sbjct: 1 MYIIAGLGNPDRKYAGTRHNIGFDVITYLSDKYNISLSKTGFKSKLGQGFIDGEKVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E +NFYK+ ++I DD+DL+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNLSGEAVGEAVNFYKIDEKTELIIIQDDIDLEPGNIRIRVKGSAGGHNGIKSIIS 120
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+++G+G P+ + HVL F + +I+ ++ + K +
Sbjct: 121 HIGGNEFIRIKLGVGGKPEGGDLADHVLSGFDRDTEPLIRKVIELAGGAILTVMKEGAET 180
Query: 180 FLNHIVSVR 188
+N ++
Sbjct: 181 AMNKYNGIK 189
>gi|238756929|ref|ZP_04618117.1| Peptidyl-tRNA hydrolase [Yersinia aldovae ATCC 35236]
gi|238704759|gb|EEP97288.1| Peptidyl-tRNA hydrolase [Yersinia aldovae ATCC 35236]
Length = 196
Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H ++ KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEEPKFFGYTARLNLAGQDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG++++ + FY++ E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 65 PSTFMNLSGKAVVAMAGFYRILP-EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + + VLG + E+ + ID R +L + +
Sbjct: 124 KLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQALIDDAIDESIRCTEVLLQEDIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|297717856|gb|ADI50071.1| peptidyl-tRNA hydrolase [Candidatus Odyssella thessalonicensis L13]
Length = 189
Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 86/185 (46%), Positives = 118/185 (63%), Gaps = 1/185 (0%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y NRHNIGFM ID I FP +K KF +SEG++ G + IL+KP
Sbjct: 6 YLLVGLGNPGAQYSLNRHNIGFMAIDIIADMQQFPNFKSKFSGLLSEGRIAGSKVILLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S+ E FYK+P L N V HDDLDL G L++K GGG GHNGLKSI +
Sbjct: 66 QTYMNLSGRSVAETAKFYKIP-LANIYVFHDDLDLQPGRLKIKRGGGAGGHNGLKSIDQC 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G++Y R+R+GIG P + +VLGNF + +L ++ I +++ L +L
Sbjct: 125 MGQDYWRIRMGIGHPGFKDAVSGYVLGNFHKDDEEWLSNVLARIGKTIEDLLAMSPSDWL 184
Query: 182 NHIVS 186
N I +
Sbjct: 185 NKINT 189
>gi|186684439|ref|YP_001867635.1| peptidyl-tRNA hydrolase [Nostoc punctiforme PCC 73102]
gi|238689436|sp|B2JA15|PTH_NOSP7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|186466891|gb|ACC82692.1| peptidyl-tRNA hydrolase [Nostoc punctiforme PCC 73102]
Length = 213
Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 72/192 (37%), Positives = 104/192 (54%), Gaps = 9/192 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQL-DGLRTILIK 60
++ GLGNP +Y + RHNIGF ++ + + +KF E EG G + L+K
Sbjct: 15 LIVGLGNPESKYDQTRHNIGFAAVEALSRSWRISLAENRKFQGEYGEGMAPGGGKIRLLK 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQS+ V ++YKLP E+ L+I+DD+DL G RL+ G GHNG+KS
Sbjct: 75 PLTYMNRSGQSIQAVTSWYKLPP-ESVLIIYDDMDLPLGKTRLRLSGSAGGHNGMKSAIA 133
Query: 121 KCG-KNYKRLRIGIGRPPDTAH-----IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+N+ RLRIGIG+P A + HVLG FSS E + ++ + + L K
Sbjct: 134 HLSTQNFPRLRIGIGKPKGAADNDDSNTVSHVLGRFSSAENQQMSLVLQFVVECIELSLK 193
Query: 175 REDVSFLNHIVS 186
+ +N S
Sbjct: 194 QGVEKAMNVCNS 205
>gi|254423495|ref|ZP_05037213.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 7335]
gi|196190984|gb|EDX85948.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 7335]
Length = 220
Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 103/187 (55%), Gaps = 8/187 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS--FHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y RHNIGF ID + + + K+F E G R +L+K
Sbjct: 26 LIVGLGNPGTKYERTRHNIGFEIIDALANSFSNVSLTPNKRFQGATGEFWSAGERVVLLK 85
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ V+++YKL LVI+DD+DL G LR++ GG GHNG+KSI
Sbjct: 86 PTTYMNRSGQAVRAVLDWYKLEPTA-VLVIYDDMDLPTGRLRMRLSGGAGGHNGMKSIIS 144
Query: 121 KCG-KNYKRLRIGIGRPPDTAH----IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G K + RLR+G+G + ++ HVLG FS +R + +I ++ L ++
Sbjct: 145 HLGTKEFPRLRVGVGSADKSGDRDGAVVSHVLGRFSPSDRKIVDAVIPMAVDAVDLSLRK 204
Query: 176 EDVSFLN 182
+N
Sbjct: 205 GVERSMN 211
>gi|161503104|ref|YP_001570216.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160864451|gb|ABX21074.1| hypothetical protein SARI_01169 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 202
Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L+G L+
Sbjct: 12 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLV 71
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 72 PTTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 130
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 131 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKDGLA 190
Query: 179 SFLNHIVSVR 188
+ + + +
Sbjct: 191 KATSRLHTFK 200
>gi|86156548|ref|YP_463333.1| peptidyl-tRNA hydrolase [Anaeromyxobacter dehalogenans 2CP-C]
gi|119390909|sp|Q2IM62|PTH_ANADE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|85773059|gb|ABC79896.1| peptidyl-tRNA hydrolase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 192
Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 71/186 (38%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY RHN+GF+ DR+ KKF AE++E +L R ++K
Sbjct: 1 MKLVVGLGNPGEEYARTRHNVGFVVADRLAQLAGASFTAKKFAAELAEARLGPERVWILK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ + F+KL L++ +V+HDDL+L+ ++LK GGG GHNG+KS++
Sbjct: 61 PQTYMNHSGEAVGAALRFWKL-GLDDLVVVHDDLELEPFRVQLKVGGGHGGHNGVKSVNA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G Y R+R+G+GRPP +VLG F+ E L ++ + L +
Sbjct: 120 HVGSPEYARVRVGVGRPPPRMDPADYVLGKFAKGEDAELDLCVEQAVEATRLAVELGAAK 179
Query: 180 FLNHIV 185
+N +
Sbjct: 180 AMNQVN 185
>gi|326318321|ref|YP_004235993.1| peptidyl-tRNA hydrolase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323375157|gb|ADX47426.1| peptidyl-tRNA hydrolase [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 213
Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 67/183 (36%), Positives = 97/183 (53%), Gaps = 7/183 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTIL 58
+ GLGNPG +Y RHN GF ID + H P ++ +H ++ ++G L
Sbjct: 3 KLFVGLGNPGPDYDATRHNAGFWWIDGLARDLKVHLVP--ERAYHGLVARANVNGQSVWL 60
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++PQTFMNLSG+S+ + F+K+ E LV HD+LD+ G +LK GG AGHNGL+ I
Sbjct: 61 LQPQTFMNLSGKSVAALARFFKIQPQE-ILVAHDELDIVPGQAKLKRGGSHAGHNGLRDI 119
Query: 119 SEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+ G +Y RLRIGIG P A + VL S R + I + ++ P + +
Sbjct: 120 HAQLGSPDYWRLRIGIGHPGVKAEVANWVLKKPSPDHRTLIEDSIAHSLKAAPAMLAGDM 179
Query: 178 VSF 180
Sbjct: 180 DKA 182
>gi|224583728|ref|YP_002637526.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224468255|gb|ACN46085.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 202
Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L+G L+
Sbjct: 12 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLV 71
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ +++FY++ + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 72 PTTFMNLSGKAVGAMVSFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 130
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 131 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLA 190
Query: 179 SFLNHIVSVR 188
+ + + +
Sbjct: 191 KATSRLHTFK 200
>gi|46576752|sp|Q7VUH3|PTH_BORPE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 215
Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats.
Identities = 69/188 (36%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GF D + A +K F +++ + G +L+KP
Sbjct: 24 LIVGLGNPGPDYETTRHNAGFWLADHLADDLRTAFALEKGFFGMLAKARHAGENVVLLKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ V FYKL E LV+HD+LDL G +++K GGG AGHNGLK I
Sbjct: 84 ITYMNRSGQSVGAVACFYKLAP-EQVLVLHDELDLLPGQVKIKQGGGHAGHNGLKDIQAA 142
Query: 122 CG-KNYKRLRIGIGRP---PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G N+ RLRIGIG P + VL E+ + +ID +P + +
Sbjct: 143 LGSPNFWRLRIGIGHPRSLGLAQQVADFVLHPPCREEQQQIDTVIDRCRAVVPAMLAGDF 202
Query: 178 VSFLNHIV 185
+
Sbjct: 203 ALATRELH 210
>gi|56751295|ref|YP_171996.1| peptidyl-tRNA hydrolase [Synechococcus elongatus PCC 6301]
gi|81299038|ref|YP_399246.1| peptidyl-tRNA hydrolase [Synechococcus elongatus PCC 7942]
gi|68052884|sp|Q5N2J4|PTH_SYNP6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391026|sp|Q31RR0|PTH_SYNE7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56686254|dbj|BAD79476.1| peptidyl-tRNA hydrolase [Synechococcus elongatus PCC 6301]
gi|81167919|gb|ABB56259.1| peptidyl-tRNA hydrolase [Synechococcus elongatus PCC 7942]
Length = 208
Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats.
Identities = 72/192 (37%), Positives = 105/192 (54%), Gaps = 9/192 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDG-LRTILIK 60
++ GLGNPG +Y E RHNIGFM IDR+ + +KF E E + G + L+K
Sbjct: 8 LLVGLGNPGQKYAETRHNIGFMLIDRLAQDWGVKLSEDRKFQGEYGETAVPGLGKIRLLK 67
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+SL V+++YKL + LVI+DD+DL G LRL+ G HNG+KSI
Sbjct: 68 PTTFMNQSGRSLRAVLDWYKLTP-QQILVIYDDMDLPLGRLRLRQSGSAGTHNGMKSIIS 126
Query: 121 KC-GKNYKRLRIGIGRPPDTAH-----IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
K++ RLR+GI P ++ + HVLG F+ E+ L ++D + +
Sbjct: 127 HLSSKDFPRLRLGISLPRSQSNDRHDATVSHVLGKFAVSEQSLLKQVLDLAQEATETALR 186
Query: 175 REDVSFLNHIVS 186
+ +N +
Sbjct: 187 SGVETAMNRYNA 198
>gi|303234870|ref|ZP_07321495.1| aminoacyl-tRNA hydrolase [Finegoldia magna BVS033A4]
gi|302493988|gb|EFL53769.1| aminoacyl-tRNA hydrolase [Finegoldia magna BVS033A4]
Length = 189
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y RHN GFM ID + K KF + I EG + + IL+K
Sbjct: 1 MYLIAGLGNPGSKYEYTRHNAGFMVIDDLAKKLNIKVNKLKFKSLIGEGFIGNEKVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++L+ N+Y L + EN +VI DD+D+ FGT+R+K G HNGLKSI
Sbjct: 61 PSTYMNDSGKAILDCFNYYNL-SAENLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ R+++ +G+ D + VL FS E L ID + + + +
Sbjct: 120 LIQSQDFARIKVSVGQN-DKYDLKDFVLSQFSKKEFEVLEKEIDMSSDAAIKIVEENVDY 178
Query: 180 FLNHIV 185
+N+
Sbjct: 179 AMNNFN 184
>gi|220933714|ref|YP_002512613.1| Aminoacyl-tRNA hydrolase [Thioalkalivibrio sp. HL-EbGR7]
gi|219995024|gb|ACL71626.1| Aminoacyl-tRNA hydrolase [Thioalkalivibrio sp. HL-EbGR7]
Length = 193
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 76/185 (41%), Positives = 105/185 (56%), Gaps = 2/185 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIKP 61
+VAGLGNPG +Y E RHN GF +D + H + KF E + L G L+KP
Sbjct: 9 LVAGLGNPGPKYTETRHNAGFWFVDALARRHGGTFRQENKFAGESARISLGGQEVWLLKP 68
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SGQS+ + FYK+P +E+ LV+HD+LDL G +RLK GGG GHNGL+ I
Sbjct: 69 QTFMNRSGQSVKLLATFYKIP-VESILVVHDELDLPPGEVRLKRGGGHGGHNGLRDIMAH 127
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
GK + RLR+G+G P ++ +VL S E +L ID+ + + E +
Sbjct: 128 LGKEFLRLRLGVGHPGHKDQVVDYVLQRPSRDEEADILRAIDHGLDVMSEVIAGELERAM 187
Query: 182 NHIVS 186
+ + S
Sbjct: 188 HKLHS 192
>gi|154249289|ref|YP_001410114.1| peptidyl-tRNA hydrolase [Fervidobacterium nodosum Rt17-B1]
gi|171769442|sp|A7HKM4|PTH_FERNB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|154153225|gb|ABS60457.1| Aminoacyl-tRNA hydrolase [Fervidobacterium nodosum Rt17-B1]
Length = 180
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 102/186 (54%), Gaps = 12/186 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
IV GLGNPG +Y RHN+GFM +DR+ + +WKK + S+ + G + LIKP
Sbjct: 2 IVIGLGNPGEKYSNTRHNVGFMVLDRLSN-----SWKKGPNYLYSDINISGEKIKLIKPM 56
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG+ + ++ +V++DDLDL G +R++ G GHNG+KSI
Sbjct: 57 TYMNLSGEVFKYL-------PHDDIIVVYDDLDLPLGKIRIRKNGSAGGHNGIKSIISFI 109
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
G+++ R+R+GIG P+ +VL NF+ E L II+ ++ + + +N
Sbjct: 110 GQDFPRIRVGIGPKPENIDAADYVLSNFTKEEFEVLDKIINLCTEAIEYIVENGIDKAMN 169
Query: 183 HIVSVR 188
S+
Sbjct: 170 RYNSIE 175
>gi|119364640|sp|Q57NM8|PTH_SALCH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 194
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L+G L+
Sbjct: 4 KLIVGLANPGTEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ +++FY++ + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVGAMVSFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLA 182
Query: 179 SFLNHIVSVR 188
+ + + +
Sbjct: 183 KATSRLHTFK 192
>gi|262280068|ref|ZP_06057853.1| peptidyl-tRNA hydrolase [Acinetobacter calcoaceticus RUH2202]
gi|262260419|gb|EEY79152.1| peptidyl-tRNA hydrolase [Acinetobacter calcoaceticus RUH2202]
Length = 193
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF I+++ + + KFH G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFIEQLANKYGITLKNDPKFHGISGRGNIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS++ FY++ E L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 TTFMNRSGQSVVPFAKFYQIAP-EAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG S E+ + ID+ + LL + + +
Sbjct: 125 IGPNFHRLRIGIGHPGSKERVSGHVLGKAPSSEQSLMDAAIDHALSKVKLLVQGQVPQAM 184
Query: 182 NHIVSVR 188
N I + +
Sbjct: 185 NQINAYK 191
>gi|24112603|ref|NP_707113.1| peptidyl-tRNA hydrolase [Shigella flexneri 2a str. 301]
gi|30062728|ref|NP_836899.1| peptidyl-tRNA hydrolase [Shigella flexneri 2a str. 2457T]
gi|46576792|sp|Q83LE1|PTH_SHIFL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|24051507|gb|AAN42820.1| peptidyl-tRNA hydrolase [Shigella flexneri 2a str. 301]
gi|30040976|gb|AAP16706.1| peptidyl-tRNA hydrolase [Shigella flexneri 2a str. 2457T]
gi|281600628|gb|ADA73612.1| Peptidyl-tRNA hydrolase [Shigella flexneri 2002017]
gi|313649393|gb|EFS13824.1| peptidyl-tRNA hydrolase [Shigella flexneri 2a str. 2457T]
Length = 194
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGSEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|226953441|ref|ZP_03823905.1| peptidyl-tRNA hydrolase [Acinetobacter sp. ATCC 27244]
gi|226835824|gb|EEH68207.1| peptidyl-tRNA hydrolase [Acinetobacter sp. ATCC 27244]
Length = 193
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++++ + KFH GQ++G L+ P
Sbjct: 6 LIVGLGNPGKEYAQTRHNAGFWFVEQLADRYGISLKADPKFHGFSGRGQIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS+ FY++ + E+ LV HD+LD+D G +RLK+GGG GHNGL+ I
Sbjct: 66 TTFMNRSGQSVAPFAKFYQI-SPESILVAHDELDMDPGVIRLKSGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVL S E++ + ID+ + LL + +
Sbjct: 125 IGANFHRLRIGIGHPGSKERVSGHVLNKAPSSEQHLMDVAIDHALSKVKLLVDGQVSLAM 184
Query: 182 NHIVSVR 188
N I + +
Sbjct: 185 NQINAYK 191
>gi|169824177|ref|YP_001691788.1| peptidyl-tRNA hydrolase [Finegoldia magna ATCC 29328]
gi|238687728|sp|B0S0D9|PTH_FINM2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|167830982|dbj|BAG07898.1| peptidyl-tRNA hydrolase [Finegoldia magna ATCC 29328]
Length = 189
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y RHN GFM ID + K KF + I EG + + IL+K
Sbjct: 1 MYLIAGLGNPGSKYEYTRHNAGFMVIDDLAKKLNIKVNKLKFKSLIGEGFIGDEKVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++L+ N+Y L + EN +VI DD+D+ FGT+R+K G HNGLKSI
Sbjct: 61 PSTYMNDSGKAILDCFNYYNL-SAENLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ R+++ +G+ D + VL FS E L ID + + + +
Sbjct: 120 LIESQDFARIKVSVGQN-DKYDLKDFVLSQFSKKEFEVLEKEIDMSSDAAIKIVEENVDY 178
Query: 180 FLNHIV 185
+N+
Sbjct: 179 AMNNFN 184
>gi|228476795|ref|ZP_04061443.1| peptidyl-tRNA hydrolase [Streptococcus salivarius SK126]
gi|228251532|gb|EEK10669.1| peptidyl-tRNA hydrolase [Streptococcus salivarius SK126]
Length = 189
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 71/180 (39%), Positives = 109/180 (60%), Gaps = 3/180 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y E RHN+GFM ID + ++K F AE++ L+G + +K
Sbjct: 3 KLVVGLGNPGSKYHETRHNVGFMAIDLMAKELGLTFSEEKTFKAEVASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG ++ ++ +Y +P +E+++VI+DDLD++ G LR + G GHNG+KSI
Sbjct: 63 PTTFMNLSGLAVRALLAYYNIP-VEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + + R++IGIGRP ++ HVLG FS + +L +D + +L K D
Sbjct: 122 ETGTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYATILLTLDKVETALNHYLKTNDFE 181
>gi|331652242|ref|ZP_08353261.1| aminoacyl-tRNA hydrolase [Escherichia coli M718]
gi|331050520|gb|EGI22578.1| aminoacyl-tRNA hydrolase [Escherichia coli M718]
Length = 194
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFFRV-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|296875515|ref|ZP_06899587.1| aminoacyl-tRNA hydrolase [Streptococcus parasanguinis ATCC 15912]
gi|322390529|ref|ZP_08064047.1| aminoacyl-tRNA hydrolase [Streptococcus parasanguinis ATCC 903]
gi|296433439|gb|EFH19214.1| aminoacyl-tRNA hydrolase [Streptococcus parasanguinis ATCC 15912]
gi|321142803|gb|EFX38263.1| aminoacyl-tRNA hydrolase [Streptococcus parasanguinis ATCC 903]
Length = 189
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 107/187 (57%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM +D++ K F A+I+ L+G + +K
Sbjct: 3 KLIVGLGNPGDKYFETKHNVGFMLVDQMAKSLNLTFSHDKIFQADIASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIN 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL-PLLAKREDV 178
G + + R++IGIGRP ++ HVLG F + +L ID + ++ L +
Sbjct: 122 HIGTQTFYRIKIGIGRPKQGMSVVHHVLGKFDKDDYITILQTIDRVEEAVNDYLVEENFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 RSMQKYN 188
>gi|198243363|ref|YP_002215360.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|226709065|sp|B5FU10|PTH_SALDC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|197937879|gb|ACH75212.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
Length = 194
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L+G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVGTMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLA 182
Query: 179 SFLNHIVSVR 188
+ + + +
Sbjct: 183 KATSRLHTFK 192
>gi|120612259|ref|YP_971937.1| peptidyl-tRNA hydrolase [Acidovorax citrulli AAC00-1]
gi|166199296|sp|A1TT75|PTH_ACIAC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|120590723|gb|ABM34163.1| peptidyl-tRNA hydrolase [Acidovorax citrulli AAC00-1]
Length = 213
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 67/183 (36%), Positives = 97/183 (53%), Gaps = 7/183 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFFPAWKKKFHAEISEGQLDGLRTIL 58
+ GLGNPG +Y RHN GF ID + H P ++ +H ++ ++G L
Sbjct: 3 KLFVGLGNPGPDYDATRHNAGFWWIDGLARDLKVHLVP--ERAYHGLVARANVNGQSVWL 60
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++PQTFMNLSG+S+ + F+K+ E LV HD+LD+ G +LK GG AGHNGL+ I
Sbjct: 61 LQPQTFMNLSGKSVAALARFFKIQPQE-ILVAHDELDILPGQAKLKRGGSHAGHNGLRDI 119
Query: 119 SEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+ G +Y RLRIGIG P A + VL S R + I + ++ P + +
Sbjct: 120 HAQLGSPDYWRLRIGIGHPGVKAEVANWVLKKPSPDHRTLIEDSIAHSLKAAPAMLAGDM 179
Query: 178 VSF 180
Sbjct: 180 DKA 182
>gi|253688506|ref|YP_003017696.1| peptidyl-tRNA hydrolase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259535213|sp|C6DHY7|PTH_PECCP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|251755084|gb|ACT13160.1| peptidyl-tRNA hydrolase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 195
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 72/190 (37%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +DR+ + P + KF S L G L+
Sbjct: 5 KLIVGLANPGAEYAATRHNAGAWFVDRLADAYRQPLKEESKFFGYTSRLNLAGQDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ + LV HD+LDL G +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVAAMATFYRI-QPDEILVAHDELDLLPGIAKLKLGGGHGGHNGLKDIIS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + + VLG + E+ + ID R +L K + +
Sbjct: 124 KLGNNPNFHRLRIGIGHPGDKSKVTGFVLGKPPTSEQTLIDDAIDEAVRCTEILMKEDMI 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 KAMNRLHAFK 193
>gi|227111323|ref|ZP_03824979.1| peptidyl-tRNA hydrolase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|227329559|ref|ZP_03833583.1| peptidyl-tRNA hydrolase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 195
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 72/190 (37%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +DR+ + P + KF S L G L+
Sbjct: 5 KLIVGLANPGAEYAATRHNAGAWFVDRLADAYRQPLKEESKFFGYTSRLNLAGQDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ + LV HD+LDL G +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVAAMATFYRI-QPDEILVAHDELDLLPGIAKLKLGGGHGGHNGLKDIIS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + + VLG + E+ + ID R +L K + +
Sbjct: 124 KLGNNPNFHRLRIGIGHPGDKSKVTGFVLGKPPTSEQTLIDDAIDEAVRCTEILMKEDMI 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 KAMNRLHAFK 193
>gi|219363585|ref|NP_001137055.1| hypothetical protein LOC100217227 [Zea mays]
gi|194698178|gb|ACF83173.1| unknown [Zea mays]
Length = 239
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 71/181 (39%), Positives = 94/181 (51%), Gaps = 3/181 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GF ID P F A + EG +DG+ +L KP
Sbjct: 37 WLFVGLGNPGEKYQSTRHNVGFDMIDAFAQSQGIPLTTHYFKALLGEGMVDGVPVLLAKP 96
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S+ + +YKLP L LV DD+DL G LRL+ GG HNGLKS+
Sbjct: 97 QTYMNLSGESVGPLAAYYKLP-LNRVLVAFDDMDLPCGVLRLQPKGGSGRHNGLKSVIYH 155
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RLRIGIGRP VL F+ R + + L ++A R
Sbjct: 156 FRKNREFCRLRIGIGRPAGQMDPKAFVLQKFNRTGRERIDSAVREGVDILKMVAARGLTE 215
Query: 180 F 180
Sbjct: 216 A 216
>gi|295104238|emb|CBL01782.1| peptidyl-tRNA hydrolase [Faecalibacterium prausnitzii SL3/3]
Length = 192
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNP +Y RHN GF +D + K KF +G+++G + +L+KP
Sbjct: 7 WLIAGLGNPEAKYDGTRHNAGFAALDALADKWNISVGKTKFQGLWGQGEVNGHKVVLLKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG S+ + F+K+P ++ LV+ DD+ G LR++ G GHNGLKSI +
Sbjct: 67 LTYMNLSGDSIAPMAGFFKIP-ADHVLVLCDDITQAPGKLRIRPSGSAGGHNGLKSIIAR 125
Query: 122 C-GKNYKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+N+ R+RIGIG P + VLG F + + ++ + L+ +
Sbjct: 126 LGGENFPRIRIGIGAKPHPDYDLAAWVLGKFPPEDAKAIADRYADLEAAAKLIMDGKLGL 185
Query: 180 FLNHIV 185
+
Sbjct: 186 AQSKYN 191
>gi|258645660|ref|ZP_05733129.1| aminoacyl-tRNA hydrolase [Dialister invisus DSM 15470]
gi|260403026|gb|EEW96573.1| aminoacyl-tRNA hydrolase [Dialister invisus DSM 15470]
Length = 190
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 96/186 (51%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +VAGLGNPG EY RHN+GF ID + WK AEI+ G + +L+K
Sbjct: 1 MKLVAGLGNPGKEYEHTRHNMGFDVIDELARRWSVNVWKTDMKAEIASVVRFGEKILLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG ++ + N+YK+P E+ +I DDLDL G R++ G GHNG+KS+
Sbjct: 61 PLTYMNLSGDAVGAIANYYKIP-AEDIYIICDDLDLPAGKTRIRKKGSAGGHNGIKSLIA 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R RIG+G P D +I HVLG E + A S+ +
Sbjct: 120 GLHTEEFVRFRIGVGHPKDGHTVIEHVLGRPYGEEIERIEAARKYTADSVERALETTVDK 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNEFN 185
>gi|62180347|ref|YP_216764.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62127980|gb|AAX65683.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|322714822|gb|EFZ06393.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 202
Score = 229 bits (586), Expect = 9e-59, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L+G L+
Sbjct: 12 KLIVGLANPGTEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLV 71
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ +++FY++ + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 72 PTTFMNLSGKAVGAMVSFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 130
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 131 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLA 190
Query: 179 SFLNHIVSVR 188
+ + + +
Sbjct: 191 KATSRLHTFK 200
>gi|229551615|ref|ZP_04440340.1| aminoacyl-tRNA hydrolase [Lactobacillus rhamnosus LMS2-1]
gi|258509517|ref|YP_003172268.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
gi|258540717|ref|YP_003175216.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus Lc 705]
gi|229315019|gb|EEN80992.1| aminoacyl-tRNA hydrolase [Lactobacillus rhamnosus LMS2-1]
gi|257149444|emb|CAR88417.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
gi|257152393|emb|CAR91365.1| Peptidyl-tRNA hydrolase [Lactobacillus rhamnosus Lc 705]
gi|259650785|dbj|BAI42947.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus GG]
Length = 185
Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HN+GFM +D + K +F A + ++ + L+K
Sbjct: 1 MKMIVGLGNPGRQYAGTKHNMGFMVVDGLAQRMGLTLNKLEFDAATATTRVHDEKVFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ ++M +Y++ L+ LV+HDD+DL G LRL+ G GHNG+K I
Sbjct: 61 PQTYMNASGRAVRQLMMYYQI-RLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + + RL+IGI P ++ VL F+ ++ + I +L
Sbjct: 120 ATGSDEFYRLKIGIQHP-QRQRVVDWVLTPFAKTDQPVIDAAITKADDALEDWLNGMPFA 178
Query: 179 SFLNHIV 185
+N
Sbjct: 179 QLMNKFN 185
>gi|302380851|ref|ZP_07269314.1| aminoacyl-tRNA hydrolase [Finegoldia magna ACS-171-V-Col3]
gi|302311346|gb|EFK93364.1| aminoacyl-tRNA hydrolase [Finegoldia magna ACS-171-V-Col3]
Length = 189
Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG +Y RHN GFM ID + K KF + I EG + + IL+K
Sbjct: 1 MYLIAGLGNPGSKYEYTRHNAGFMVIDDLAKKLNIKVNKLKFKSLIGEGFIGNEKVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++L+ N+Y L + EN +VI DD+D+ FGT+R+K G HNGLKSI
Sbjct: 61 PSTYMNDSGKAILDCFNYYNL-SAENLIVICDDIDIPFGTIRIKKKGSAGTHNGLKSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ R+++ +G+ D + VL FS E L ID + + + +
Sbjct: 120 LIESQDFARIKVSVGQN-DKYDLKDFVLSQFSKNEFEVLEKEIDMSSDAAIKIVEENVDY 178
Query: 180 FLNHIV 185
+N+
Sbjct: 179 AMNNFN 184
>gi|289547988|ref|YP_003472976.1| peptidyl-tRNA hydrolase [Thermocrinis albus DSM 14484]
gi|289181605|gb|ADC88849.1| peptidyl-tRNA hydrolase [Thermocrinis albus DSM 14484]
Length = 190
Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 65/180 (36%), Positives = 105/180 (58%), Gaps = 2/180 (1%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
V GLGNPG EY RHN+GFM +D++ S + ++ + + ++ G L+KPQT
Sbjct: 5 VVGLGNPGKEYERTRHNVGFMVLDQLVSRLRVRDYTEECLSHLYRAKVGGREVFLVKPQT 64
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
+MN SG ++ ++ Y++ E LV+HDDLDL G +RL+T G GH+G++SI +
Sbjct: 65 YMNNSGLAVFNLLEDYQILP-EELLVVHDDLDLPLGKMRLRTEGSSGGHHGVESIIREIK 123
Query: 124 KN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
+ RL+IGIGRP D + ++++VL FS E LL +++ + + + S +N
Sbjct: 124 TERFPRLKIGIGRPKDKSKVVQYVLSPFSKEEEPILLKVLERATECILRVLETSPESSMN 183
>gi|241889652|ref|ZP_04776950.1| peptidyl-tRNA hydrolase [Gemella haemolysans ATCC 10379]
gi|241863274|gb|EER67658.1| peptidyl-tRNA hydrolase [Gemella haemolysans ATCC 10379]
Length = 185
Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 62/186 (33%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGFM +D + K KF++E + +G++ +LIK
Sbjct: 1 MKLIVGLGNPGKQYENTRHNIGFMVLDELAKSWNVSFDKTKFNSEYAMTYHNGIKYLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + +++++ + ++ DLD +LK G GHNG+KSI
Sbjct: 61 PTTYMNLSGEAVGKFYDYFEIDIEDILIIYD-DLDTKTANFKLKAKGSSGGHNGIKSIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGI RP ++ +VLG FS E + I + +K V
Sbjct: 120 HLGTEKFNRLKIGIDRPTPPMKVVDYVLGRFSKDEMVEIEKIYSKSINCIEDFSKMNFVD 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 LMNKYN 185
>gi|188992870|ref|YP_001904880.1| peptidyl-tRNA hydrolase [Xanthomonas campestris pv. campestris str.
B100]
gi|167734630|emb|CAP52840.1| unnamed protein product [Xanthomonas campestris pv. campestris]
Length = 206
Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 64/189 (33%), Positives = 94/189 (49%), Gaps = 3/189 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D + K E ++ ++ G L+KP
Sbjct: 19 LIVGLGNPGPEHAQTRHNAGFRFVDALAERTGARWGLDSKLFGETAKAEIAGHTVWLLKP 78
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E LV HD+LDL GT RLK GG G NGL+
Sbjct: 79 ATFMNLSGKSITAALRFWKIEP-EQLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIRL 137
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG + + +D +LPL
Sbjct: 138 LGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGRDDDMAIGEAVDAAIDALPLALDGNFNEA 197
Query: 181 LNHIVSVRK 189
+ + + +K
Sbjct: 198 MKRLHTPKK 206
>gi|42524124|ref|NP_969504.1| peptidyl-tRNA hydrolase [Bdellovibrio bacteriovorus HD100]
gi|68052963|sp|Q6MJR3|PTH_BDEBA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|39576332|emb|CAE80497.1| pth [Bdellovibrio bacteriovorus HD100]
Length = 187
Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 107/188 (56%), Gaps = 3/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG EY RHNIGFM +D + P K +F AEI++ ++ I K
Sbjct: 1 MWLIVGLGNPGGEYKLTRHNIGFMAVDFLMEGLGNPPIKNQFKAEIAQAKIKDHPVIFCK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ +M FYK+P LE +VIHD++D F ++++ G GHNG+KSIS
Sbjct: 61 PQTYMNLSGESVQPLMGFYKIP-LERLIVIHDEIDQPFAQMKIQKNRGHGGHNGIKSISG 119
Query: 121 KCGK-NYKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G +Y RLR+G+GRP + + +VLG F+ E + ++ ++ +
Sbjct: 120 LMGSMDYTRLRLGVGRPANPNIPVPDYVLGKFTKEEFAQMPDFLNKAGDAVESIILDGIQ 179
Query: 179 SFLNHIVS 186
+
Sbjct: 180 KASTKFNT 187
>gi|326623106|gb|EGE29451.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 202
Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L+G L+
Sbjct: 12 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLV 71
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 72 PTTFMNLSGKAVGTMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 130
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 131 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLA 190
Query: 179 SFLNHIVSVR 188
+ + + +
Sbjct: 191 KATSRLHTFK 200
>gi|149925759|ref|ZP_01914023.1| peptidyl-tRNA hydrolase [Limnobacter sp. MED105]
gi|149825876|gb|EDM85084.1| peptidyl-tRNA hydrolase [Limnobacter sp. MED105]
Length = 235
Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 99/190 (52%), Gaps = 6/190 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G ++ + H F K+F +++ + G L+
Sbjct: 44 KLIVGLGNPGPQYADTRHNAGVWYLEALARKHNVFLQSDKRFFGDLARIKFAGEDVWLLF 103
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + F+K+ E LV HD+LDL G +++K GGG AGHNGLK +
Sbjct: 104 PTTFMNRSGQAVGALAKFFKIKP-EEILVAHDELDLLPGQIKMKKGGGFAGHNGLKDMHA 162
Query: 121 KCGK-NYKRLRIGIGRPPD---TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G ++ R RIGIG P + VL SS ++ + ID + + L+ K +
Sbjct: 163 HLGSGDFWRARIGIGHPRSLNLQQGVADFVLHRPSSEQQQVIDKSIDVLLKHTELILKGQ 222
Query: 177 DVSFLNHIVS 186
HI +
Sbjct: 223 IGQATTHIHT 232
>gi|225621396|ref|YP_002722655.1| putative peptidyl-tRNA hydrolase [Brachyspira hyodysenteriae WA1]
gi|225216217|gb|ACN84951.1| putative peptidyl-tRNA hydrolase [Brachyspira hyodysenteriae WA1]
Length = 297
Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 71/186 (38%), Positives = 105/186 (56%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY NRHN+GF+ ID+I K + + + + IL+KP
Sbjct: 3 KLIIGLGNPGDEYKNNRHNVGFILIDKIAQNFNINFDNNKKKSLYARSKEKDIEYILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S + + F+ + E+ +VI+DD+D+ FGT ++K GG GHNG+KS+
Sbjct: 63 QTFMNLSGESAIFISKFFNIKP-EDIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLISH 121
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII-DNIARSLPLLAKREDVS 179
++ R+RIGIGRP + +VL NFS ER L II ++I ++ + V
Sbjct: 122 LQSDDFTRIRIGIGRPSAGKKVNDYVLSNFSKKEREELDTIIANDIIDAVKIALFESPVI 181
Query: 180 FLNHIV 185
N
Sbjct: 182 AQNKYN 187
>gi|260550955|ref|ZP_05825160.1| peptidyl-tRNA hydrolase [Acinetobacter sp. RUH2624]
gi|260405903|gb|EEW99390.1| peptidyl-tRNA hydrolase [Acinetobacter sp. RUH2624]
Length = 193
Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 2/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++++ + KFH G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS++ FY++ E L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 TTYMNRSGQSVVPFSKFYQIAP-EAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG S E+ + ID+ + LL + + +
Sbjct: 125 IGPNFHRLRIGIGHPGSKERVSGHVLGKAPSSEQSLMDGAIDHALSKVKLLVQGQISQAM 184
Query: 182 NHIVSVR 188
N I + +
Sbjct: 185 NQINAYK 191
>gi|331662607|ref|ZP_08363530.1| aminoacyl-tRNA hydrolase [Escherichia coli TA143]
gi|331061029|gb|EGI32993.1| aminoacyl-tRNA hydrolase [Escherichia coli TA143]
Length = 194
Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 182
Query: 179 SFLNHIVSVR 188
N + +
Sbjct: 183 KATNRLHPFK 192
>gi|218549105|ref|YP_002382896.1| peptidyl-tRNA hydrolase [Escherichia fergusonii ATCC 35469]
gi|226723255|sp|B7LSI6|PTH_ESCF3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|218356646|emb|CAQ89272.1| peptidyl-tRNA hydrolase [Escherichia fergusonii ATCC 35469]
gi|324113963|gb|EGC07937.1| peptidyl-tRNA hydrolase [Escherichia fergusonii B253]
gi|325497521|gb|EGC95380.1| peptidyl-tRNA hydrolase [Escherichia fergusonii ECD227]
Length = 194
Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L+G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDFLAERLRAPLREEPKFFGYTSRINLEGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR + K
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVTEQKLIDEAIDEAARCTEVWFKEGLA 182
Query: 179 SFLNHIVSVR 188
+ + + +
Sbjct: 183 KATSRLHTFK 192
>gi|242088699|ref|XP_002440182.1| hypothetical protein SORBIDRAFT_09g027420 [Sorghum bicolor]
gi|241945467|gb|EES18612.1| hypothetical protein SORBIDRAFT_09g027420 [Sorghum bicolor]
Length = 262
Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN+GF ID I K+F A + +G + + +L KP
Sbjct: 68 WLFVGLGNPGRMYKGTRHNVGFEMIDAIAEAEGISVSSKQFKAIVGKGLIGDVPVMLAKP 127
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+S+ ++++++K+P L +VI+DDLDL F LRL GG GHNG++SI +
Sbjct: 128 QTFMNASGESVGQLVSYFKIP-LNQLVVIYDDLDLPFAKLRLLPKGGHGGHNGMRSIIDH 186
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+N+ RLRIGIGRPP+ I VL +F+ E+ L + +++ ++ +
Sbjct: 187 LKQSRNFARLRIGIGRPPEEQGAISFVLQSFTVQEKEELEVVFQRGLQAVRIMVQEGFNK 246
Query: 180 FLNHIVS 186
+ +
Sbjct: 247 SAQFVNT 253
>gi|82750209|ref|YP_415950.1| peptidyl-tRNA hydrolase [Staphylococcus aureus RF122]
gi|119391014|sp|Q2YVY3|PTH_STAAB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|82655740|emb|CAI80139.1| peptidyl-tRNA hydrolase [Staphylococcus aureus RF122]
Length = 190
Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + RHNIGF +D I + F K+KF + +++G + + I+
Sbjct: 1 MKCIVGLGNIGKRFELTRHNIGFEVVDYILEKNNFSLDKQKFKGAYTIERMNGDKVLFIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + N E+ +V++DDLDL+ G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVAPIMDYYNV-NPEDLIVLYDDLDLEQGQVRLRQKGSAGGHNGMKSIIK 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + +KR+RIG+GRP + + +VL FS+ E + +I++ R++ +
Sbjct: 120 MLGTDQFKRIRIGVGRPTNGMTVPDYVLQRFSNDEMVTMEKVIEHAGRAIEKFVETSRFD 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 HVMNEFN 186
>gi|301169096|emb|CBW28693.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 10810]
Length = 194
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ + KF + + ++G L+
Sbjct: 5 KLIVGLGNPGEKYADTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P + +VL S +R L ++D + ++ K +
Sbjct: 124 QLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRNALENVLDEATDCVEMIFKDGMI 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|296101951|ref|YP_003612097.1| peptidyl-tRNA hydrolase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295056410|gb|ADF61148.1| peptidyl-tRNA hydrolase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 194
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF+ S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFYGYTSRINLAGADVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMATFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + +D AR + K
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAVDEAARCTEIWLKDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|260779390|ref|ZP_05888282.1| peptidyl-tRNA hydrolase [Vibrio coralliilyticus ATCC BAA-450]
gi|260605554|gb|EEX31849.1| peptidyl-tRNA hydrolase [Vibrio coralliilyticus ATCC BAA-450]
Length = 228
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G ++ + H + KF ++G L+
Sbjct: 38 KLLVGLANPGPEYARTRHNAGAWVVEELARVHNITLKNEAKFFGLTGRIMMNGQDLRLLI 97
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + FY++ E +V HD+LDL G + K GGG GHNGL+
Sbjct: 98 PTTFMNLSGKSIAALAKFYQIKP-EEIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDTIS 156
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G K++ RLRIGIG P + VLG + E+ L D R L +L K
Sbjct: 157 KLGNCKDFYRLRIGIGHPGHKDKVAGFVLGKAPAKEQELLDAAADESVRCLDILIKDGLS 216
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 217 KAQNRLHTFK 226
>gi|299771340|ref|YP_003733366.1| peptidyl-tRNA hydrolase [Acinetobacter sp. DR1]
gi|298701428|gb|ADI91993.1| peptidyl-tRNA hydrolase [Acinetobacter sp. DR1]
Length = 193
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF I+++ + + KFH G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFIEQLANKYGITLKNDPKFHGISGRGNIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS++ FY++ E L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 TTFMNRSGQSVVPFAKFYQIAP-EAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG S E+ + ID+ + LL + + +
Sbjct: 125 IGSNFHRLRIGIGHPGSKERVSGHVLGKAPSSEQSLMDAAIDHALSKVKLLVQGQVPQAM 184
Query: 182 NHIVSVR 188
N I + +
Sbjct: 185 NQINAYK 191
>gi|145640350|ref|ZP_01795934.1| peptidyl-tRNA hydrolase [Haemophilus influenzae R3021]
gi|145274936|gb|EDK14798.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 22.4-21]
Length = 194
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ + KF + + ++G L+
Sbjct: 5 KLIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P + +VL S +R L ++D + ++ K V
Sbjct: 124 QLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEMIFKDGMV 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|125553210|gb|EAY98919.1| hypothetical protein OsI_20874 [Oryza sativa Indica Group]
Length = 235
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 66/180 (36%), Positives = 103/180 (57%), Gaps = 3/180 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG Y RHN+GF ID I K+F + + +G + + +L KP
Sbjct: 41 WLLIGLGNPGRMYKGTRHNVGFEMIDAIAEAEGISVSSKQFKSMVGKGLIGDVPVMLAKP 100
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+S+ ++++++K+P L LVI+DDLD+ F LRL GG GHNG++SI
Sbjct: 101 QTYMNASGESVAQLVSYFKIP-LSQVLVIYDDLDIPFAKLRLLPKGGHGGHNGMRSIINH 159
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ RLRIGIGRP I VL +F+ E+ L I+ +++ ++
Sbjct: 160 LKQSRDFPRLRIGIGRPTGKLDAIGFVLRSFTKEEQEELNLTINRSLQAVRIMLLEGFNK 219
>gi|312144319|ref|YP_003995765.1| peptidyl-tRNA hydrolase [Halanaerobium sp. 'sapolanicus']
gi|311904970|gb|ADQ15411.1| peptidyl-tRNA hydrolase [Halanaerobium sp. 'sapolanicus']
Length = 185
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHNIGFM + + + KF + G + I+ +
Sbjct: 1 MKVIAGLGNPGEKYARTRHNIGFMITAELAKKYSVNS-SYKFDGLYGDYFFAGEKIIIFQ 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +MN SGQ + +++ +Y + LE+ LVIHDDLDLD G +R K G GHNG+KSI
Sbjct: 60 PMKYMNRSGQPIAKLLRYYDI-ELEDLLVIHDDLDLDLGKIRFKRNGSSGGHNGIKSIIN 118
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ K++KRL++G+GRPP + +VL F E+ +ID ++ L+ K + V
Sbjct: 119 RLDSKDFKRLKVGVGRPPGNIPVSDYVLTTFQGEEKKIASEVIDRSVSAVELMLKEDIVR 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 AMNMYN 184
>gi|300906889|ref|ZP_07124563.1| peptidyl-tRNA hydrolase [Escherichia coli MS 84-1]
gi|301305574|ref|ZP_07211665.1| peptidyl-tRNA hydrolase [Escherichia coli MS 124-1]
gi|300401322|gb|EFJ84860.1| peptidyl-tRNA hydrolase [Escherichia coli MS 84-1]
gi|300839163|gb|EFK66923.1| peptidyl-tRNA hydrolase [Escherichia coli MS 124-1]
gi|315254837|gb|EFU34805.1| peptidyl-tRNA hydrolase [Escherichia coli MS 85-1]
Length = 194
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEGVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|15605860|ref|NP_213237.1| peptidyl-tRNA hydrolase [Aquifex aeolicus VF5]
gi|6647697|sp|O66677|PTH_AQUAE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|2983032|gb|AAC06642.1| peptidyl-tRNA hydrolase [Aquifex aeolicus VF5]
Length = 192
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 65/181 (35%), Positives = 100/181 (55%), Gaps = 2/181 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG EY + RHN+GFM ID + ++ + + + ++ G IL KP
Sbjct: 4 KLVVGLGNPGKEYEKTRHNVGFMVIDELVKALRAKGPFEEALSHVYKARIGGKEVILAKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG ++ ++ YKL + E +V++DDLDL G +RL+ G GH G++SI +
Sbjct: 64 MTYMNNSGAAVYNLLEEYKL-SPEQMIVVYDDLDLPLGHMRLRLKGSSGGHRGVESIIKY 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +N+ RLRIGIGRP ++++VL FS E + +I R L +
Sbjct: 123 IGTQNFPRLRIGIGRPKKKEDVVKYVLSPFSPEEEKVISQVIKKAVRCLMRAIEISPEHA 182
Query: 181 L 181
+
Sbjct: 183 M 183
>gi|33594044|ref|NP_881688.1| peptidyl-tRNA hydrolase [Bordetella pertussis Tohama I]
gi|33564118|emb|CAE43390.1| peptidyl-tRNA hydrolase [Bordetella pertussis Tohama I]
Length = 198
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 69/188 (36%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GF D + A +K F +++ + G +L+KP
Sbjct: 7 LIVGLGNPGPDYETTRHNAGFWLADHLADDLRTAFALEKGFFGMLAKARHAGENVVLLKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ V FYKL E LV+HD+LDL G +++K GGG AGHNGLK I
Sbjct: 67 ITYMNRSGQSVGAVACFYKLAP-EQVLVLHDELDLLPGQVKIKQGGGHAGHNGLKDIQAA 125
Query: 122 CG-KNYKRLRIGIGRP---PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G N+ RLRIGIG P + VL E+ + +ID +P + +
Sbjct: 126 LGSPNFWRLRIGIGHPRSLGLAQQVADFVLHPPCREEQQQIDTVIDRCRAVVPAMLAGDF 185
Query: 178 VSFLNHIV 185
+
Sbjct: 186 ALATRELH 193
>gi|156933667|ref|YP_001437583.1| peptidyl-tRNA hydrolase [Cronobacter sakazakii ATCC BAA-894]
gi|166199330|sp|A7MNK0|PTH_ENTS8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|156531921|gb|ABU76747.1| hypothetical protein ESA_01489 [Cronobacter sakazakii ATCC BAA-894]
Length = 194
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S ++G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLADRFRAPLKEEAKFFGYTSRINVNGNDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMATFYRIAPDE-ILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + +D AR + +
Sbjct: 123 KLGNNPNFHRLRLGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAVDEAARCTEIWLQDGLT 182
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 183 KATNRLHSFK 192
>gi|191639458|ref|YP_001988624.1| peptidyl-tRNA hydrolase [Lactobacillus casei BL23]
gi|227533043|ref|ZP_03963092.1| peptidyl-tRNA hydrolase (PTH) [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239630378|ref|ZP_04673409.1| peptidyl-tRNA hydrolase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301067529|ref|YP_003789552.1| peptidyl-tRNA hydrolase [Lactobacillus casei str. Zhang]
gi|238693015|sp|B3WAP7|PTH_LACCB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|190713760|emb|CAQ67766.1| Peptidyl-tRNA hydrolase (PTH) [Lactobacillus casei BL23]
gi|205270977|emb|CAP07850.1| peptidyl tRNA hydrolase [Lactobacillus casei BL23]
gi|227189444|gb|EEI69511.1| peptidyl-tRNA hydrolase (PTH) [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239526661|gb|EEQ65662.1| peptidyl-tRNA hydrolase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300439936|gb|ADK19702.1| Peptidyl-tRNA hydrolase [Lactobacillus casei str. Zhang]
gi|327383551|gb|AEA55027.1| Peptidyl-tRNA hydrolase [Lactobacillus casei LC2W]
gi|327386743|gb|AEA58217.1| Peptidyl-tRNA hydrolase [Lactobacillus casei BD-II]
Length = 185
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y ++HN+GFM +D + K +F A + +L+G + L+K
Sbjct: 1 MKMIVGLGNPGQKYAGSKHNMGFMVVDGLAKRLNLTIDKLEFDAATATTRLNGEKIFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ E+M FY++ L+ V+ DD+DL G LRL+ G GHNG+K I
Sbjct: 61 PQTFMNASGRAVRELMMFYQI-QLDEIFVVQDDMDLTLGKLRLRKRGSAGGHNGIKDIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + + RL+IGI P ++ VL FS ++ + I+ +L
Sbjct: 120 ATGSDEFCRLKIGIQHP-QRQRVVDWVLTPFSKTDQPLIDDAIEKADDALEDWLNGMPFD 178
Query: 179 SFLNHIV 185
+N
Sbjct: 179 QLMNKFN 185
>gi|157145516|ref|YP_001452835.1| peptidyl-tRNA hydrolase [Citrobacter koseri ATCC BAA-895]
gi|166199324|sp|A8AFY6|PTH_CITK8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157082721|gb|ABV12399.1| hypothetical protein CKO_01259 [Citrobacter koseri ATCC BAA-895]
Length = 194
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L+G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRVTLEGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVGAMASFYRIMPDE-ILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIN 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + ID AR + K
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDDAIDEAARCTEVWFKEGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|268608428|ref|ZP_06142155.1| peptidyl-tRNA hydrolase [Ruminococcus flavefaciens FD-1]
Length = 208
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG EY RHN GFM +D + S + +F + +E + R +L+KP
Sbjct: 23 YVIAGLGNPGMEYDNTRHNAGFMVLDMLASQLGEEINRLRFKGKTAEVMIGDKRCLLLKP 82
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S+++ + FYK+ ++++ +V+ DD+ LD G LR++ G GHNGL+SI +
Sbjct: 83 TTYMNNSGESIVQALEFYKI-DVDHLIVVCDDISLDAGKLRIRRKGSHGGHNGLRSICDL 141
Query: 122 CGK-NYKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+ +Y+R+++G+G+ P + + VLG F + + +N L L+ + +
Sbjct: 142 TGRDDYQRIKMGVGKKPHPDYDLAKWVLGKFGKEDAEKMKQSAENACECLKLMVQGKTDE 201
Query: 180 FLNHIVS 186
+N S
Sbjct: 202 AMNKYNS 208
>gi|1127573|gb|AAB06185.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi]
Length = 194
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L+G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLADGLRAPLREEPKFFGYTSRITLEGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + ID AR L K
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLA 182
Query: 179 SFLNHIVSVR 188
+ + + +
Sbjct: 183 KATSRLHTFK 192
>gi|322373974|ref|ZP_08048508.1| aminoacyl-tRNA hydrolase [Streptococcus sp. C150]
gi|321276940|gb|EFX54011.1| aminoacyl-tRNA hydrolase [Streptococcus sp. C150]
Length = 189
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/180 (38%), Positives = 108/180 (60%), Gaps = 3/180 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y E RHN+GFM ID I ++K F AE++ L+G + +K
Sbjct: 3 KLVVGLGNPGSKYHETRHNVGFMAIDLIAKGLGLTFSEEKTFKAEVASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG ++ ++ +Y +P +EN++VI+DDLD++ G +R + G GHNG+KSI
Sbjct: 63 PTTFMNLSGLAVRALLAYYNIP-IENFIVIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + + R++IGIGRP ++ HVLG F+ + + +D + +L K D
Sbjct: 122 ETGTQEFDRIKIGIGRPQKGMTVVNHVLGRFNEDDYATIQLTLDKVEAALNHYLKTNDFE 181
>gi|160944869|ref|ZP_02092096.1| hypothetical protein FAEPRAM212_02385 [Faecalibacterium prausnitzii
M21/2]
gi|158444053|gb|EDP21057.1| hypothetical protein FAEPRAM212_02385 [Faecalibacterium prausnitzii
M21/2]
Length = 206
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNP +Y RHN GF +D + K KF +G+++G + +L+KP
Sbjct: 21 WLIAGLGNPEAKYDGTRHNAGFAALDALADKWNISVGKTKFQGLWGQGEVNGHKVVLLKP 80
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG S+ + F+K+P ++ LV+ DD+ G LR++ G GHNGLKSI +
Sbjct: 81 LTYMNLSGDSIAPMAGFFKIP-ADHVLVLCDDITQAPGKLRIRPSGSAGGHNGLKSIIAR 139
Query: 122 C-GKNYKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+N+ R+RIGIG P + VLG F + + ++ + L+ +
Sbjct: 140 LGGENFPRIRIGIGAKPHPDYDLAAWVLGKFPPEDAKAIADRYADLEAAAKLIMDGKLGL 199
Query: 180 FLNHIV 185
+
Sbjct: 200 AQSKYN 205
>gi|270594841|ref|ZP_06221504.1| aminoacyl-tRNA hydrolase [Haemophilus influenzae HK1212]
gi|270318345|gb|EFA29501.1| aminoacyl-tRNA hydrolase [Haemophilus influenzae HK1212]
Length = 212
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ + KF + + ++G L+
Sbjct: 23 KLIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLV 82
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I
Sbjct: 83 PTTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVA 141
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P + +VL S +R L ++D + ++ K V
Sbjct: 142 QLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRNALEKVLDEATDCVEMIFKDGMV 201
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 202 KATNRLNSFK 211
>gi|262376652|ref|ZP_06069880.1| peptidyl-tRNA hydrolase [Acinetobacter lwoffii SH145]
gi|262308362|gb|EEY89497.1| peptidyl-tRNA hydrolase [Acinetobacter lwoffii SH145]
Length = 193
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 102/187 (54%), Gaps = 2/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++R+ + K KF+ G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFVERLAEQYGITLKKDPKFNGFSGRGNIEGQDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S++ FY + E+ L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 TTFMNLSGKSVVPFAKFYNIAP-ESILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVL S E+ + I + +L E +
Sbjct: 125 IGSNFHRLRIGIGHPGAKDRVSGHVLSKAPSSEQNLMDDAISHALARTKMLVNGEVQQAM 184
Query: 182 NHIVSVR 188
N I + +
Sbjct: 185 NQINAYK 191
>gi|260893904|ref|YP_003240001.1| peptidyl-tRNA hydrolase [Ammonifex degensii KC4]
gi|260866045|gb|ACX53151.1| peptidyl-tRNA hydrolase [Ammonifex degensii KC4]
Length = 195
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 98/184 (53%), Gaps = 3/184 (1%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKPQ 62
V GLGNPG Y + RHN+GFM +DR+ K+ K + ++ +L+ L+KPQ
Sbjct: 9 VVGLGNPGPAYADTRHNLGFMVLDRLARQVGVSFAKEVKLCSRLAVLRLEDREVYLLKPQ 68
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG+++ ++ +L E LVI+DDLDL G L+L G GH G+ S+ E
Sbjct: 69 TYMNLSGEAVKLLVEKKELFP-EEILVIYDDLDLPLGRLKLALSGSSGGHRGMGSVLESL 127
Query: 123 GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G + RLR+GIGRPP +VL F+ ER L +++ ++ + +
Sbjct: 128 GTTSVPRLRLGIGRPPAGLDPATYVLSPFAPEEREELDRVLERAVAAVECALQEGMAQAM 187
Query: 182 NHIV 185
N
Sbjct: 188 NKFN 191
>gi|218704726|ref|YP_002412245.1| peptidyl-tRNA hydrolase [Escherichia coli UMN026]
gi|293404747|ref|ZP_06648739.1| peptidyl-tRNA hydrolase [Escherichia coli FVEC1412]
gi|298380390|ref|ZP_06989989.1| PTH1 family peptidyl-tRNA hydrolase [Escherichia coli FVEC1302]
gi|300896591|ref|ZP_07115111.1| peptidyl-tRNA hydrolase [Escherichia coli MS 198-1]
gi|226723252|sp|B7N415|PTH_ECOLU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|218431823|emb|CAR12708.1| peptidyl-tRNA hydrolase [Escherichia coli UMN026]
gi|291426955|gb|EFE99981.1| peptidyl-tRNA hydrolase [Escherichia coli FVEC1412]
gi|298277832|gb|EFI19346.1| PTH1 family peptidyl-tRNA hydrolase [Escherichia coli FVEC1302]
gi|300359571|gb|EFJ75441.1| peptidyl-tRNA hydrolase [Escherichia coli MS 198-1]
Length = 194
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPLGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|317490360|ref|ZP_07948844.1| peptidyl-tRNA hydrolase [Eggerthella sp. 1_3_56FAA]
gi|325833603|ref|ZP_08166052.1| aminoacyl-tRNA hydrolase [Eggerthella sp. HGA1]
gi|316910495|gb|EFV32120.1| peptidyl-tRNA hydrolase [Eggerthella sp. 1_3_56FAA]
gi|325485527|gb|EGC87996.1| aminoacyl-tRNA hydrolase [Eggerthella sp. HGA1]
Length = 185
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 104/186 (55%), Gaps = 5/186 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG EY RHN GF +D I WK + A ++G +L K
Sbjct: 1 MFLIVGLGNPGEEYEHTRHNAGFDAVDLIAEEVGARYWKTECGALTTKGVYRDHDLVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ++MN SG + ++MN Y + + E+ +V+HD+LD+D GT+R+K GGG AGHNGL+SI +
Sbjct: 61 PQSYMNTSGGPVKQLMNAYGV-DAEHLIVVHDELDIDPGTVRVKFGGGHAGHNGLRSICD 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK---RE 176
K G +++ R+R+GIGRPP ++ VL D A++ L + +
Sbjct: 120 KLGTRDWHRVRVGIGRPPGRMPVVDWVLSKPKKDAADDFAQATDRGAQAALSLVQVGLEK 179
Query: 177 DVSFLN 182
N
Sbjct: 180 TQQAFN 185
>gi|197119139|ref|YP_002139566.1| peptidyl-tRNA hydrolase [Geobacter bemidjiensis Bem]
gi|226694254|sp|B5EHX1|PTH_GEOBB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|197088499|gb|ACH39770.1| peptidyl-tRNA hydrolase [Geobacter bemidjiensis Bem]
Length = 188
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 77/182 (42%), Positives = 112/182 (61%), Gaps = 3/182 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GFM +DR+ S +K F +G R L+KP
Sbjct: 4 KLIVGLGNPGPKYSWTRHNAGFMVLDRLASLSGIQVTRKAFSGLSGDGNWSSERVYLLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ E + FYKL +L + +VIHDDLD+ FG ++LK GGG GHNGL+S++++
Sbjct: 64 QTFMNLSGRSVAEALRFYKL-SLSDLIVIHDDLDIPFGKVKLKEGGGHGGHNGLRSLAQE 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + Y R+R+GIGRP ++ VL NF+ E LL ++D +L ++ K
Sbjct: 123 LGSSAYARIRVGIGRPVH-GDVVNFVLTNFAKEEMDSLLEVLDTSVDALEMMIKEGMPKA 181
Query: 181 LN 182
++
Sbjct: 182 MS 183
>gi|332111765|gb|EGJ11745.1| peptidyl-tRNA hydrolase [Rubrivivax benzoatilyticus JA2]
Length = 213
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 63/185 (34%), Positives = 91/185 (49%), Gaps = 3/185 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG EY RHN GF ++ + ++ + A + L++P
Sbjct: 4 LFVGLGNPGPEYEATRHNAGFWWLEALADKLGARLVPERGYQALAARVNTPHGPVWLLEP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG S+ + F+K+ E LV+HD+LDL G ++K GG AGHNGLK I +
Sbjct: 64 MTYMNRSGFSVATLARFFKIAPNE-ILVVHDELDLQPGEAKIKLGGSAAGHNGLKDIHSQ 122
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ RLR+GIG P A ++ VL S R + I+ + LL E
Sbjct: 123 LGTLDFWRLRLGIGHPGVRAEVVNWVLKKPSPDHREAIAKAIEQSLAASDLLLAGEMDRA 182
Query: 181 LNHIV 185
L I
Sbjct: 183 LQKIH 187
>gi|225568649|ref|ZP_03777674.1| hypothetical protein CLOHYLEM_04727 [Clostridium hylemonae DSM
15053]
gi|225162577|gb|EEG75196.1| hypothetical protein CLOHYLEM_04727 [Clostridium hylemonae DSM
15053]
Length = 194
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 108/190 (56%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MFI+AGLGNP +Y RHN+GF ID + + +K A I +G + G + +L K
Sbjct: 1 MFIIAGLGNPTLQYEGTRHNVGFDVIDTVARKYNISVDYRKNRAYIGKGIIAGQKVLLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ ++++YK+ LVI+DD+ L G LR++ G GHNG+KSI
Sbjct: 61 PQTYMNLSGESIRGLVDYYKVDEESQLLVIYDDVSLGAGQLRIRKKGSAGGHNGIKSIIS 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++G+G P + +VLG+FS ER + + A ++ ++ E +
Sbjct: 121 CLGTDIFPRIKVGVGEKPKRYDLADYVLGHFSREEREMMEEGYGHAAEAVEMIVAGEIDA 180
Query: 180 FLNHIVSVRK 189
+N K
Sbjct: 181 AMNEYNRKVK 190
>gi|145628757|ref|ZP_01784557.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 22.1-21]
gi|144979227|gb|EDJ88913.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 22.1-21]
Length = 194
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ + KF + + ++G L+
Sbjct: 5 KLIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P + +VL S +R L ++D + ++ K +
Sbjct: 124 QLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEIIFKDGMI 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|312876094|ref|ZP_07736082.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor lactoaceticus 6A]
gi|311797080|gb|EFR13421.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor lactoaceticus 6A]
Length = 189
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 107/185 (57%), Gaps = 4/185 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+AGLGNPG Y RHN GF+ ID + F K KF + + G + +L+KP
Sbjct: 3 YIIAGLGNPGERYTFTRHNAGFLAIDYLAQFFNTKVDKIKFKGLVGSFEYSGKKVLLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG S++E +NFYK+ E +VI+DD+ D G ++++ G D GHNG+KSI ++
Sbjct: 63 MTYMNASGDSIIEAVNFYKIKP-EKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQR 121
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + R+RIGIG P ++++VL F E+ + I+ A + +L + +
Sbjct: 122 LGTEEFPRIRIGIGIPKH--DMVKYVLSEFEDGEKEKIFKAIEKAANGIKILLESDIDRA 179
Query: 181 LNHIV 185
+N+I
Sbjct: 180 MNYIN 184
>gi|16331675|ref|NP_442403.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
gi|2499989|sp|Q59989|PTH_SYNY3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|1001232|dbj|BAA10473.1| peptidyl-tRNA hydrolase [Synechocystis sp. PCC 6803]
Length = 194
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNP +Y + RHNIGF +D + + K+F EG + G +T L+K
Sbjct: 4 KLIVGLGNPEPKYDQTRHNIGFAVVDALAITWQCSWYDHKRFQGWFGEGLMAGQKTCLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MN SGQ++ V+++YKL + ++ LV++DD+DL G LRL+ G GHNG+KS+
Sbjct: 64 PRTYMNRSGQAVRAVVDWYKL-DPQSVLVVYDDMDLPLGRLRLRQTGSAGGHNGMKSLIS 122
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ RLR+GIG+ + I HVLG FS E + +D ++
Sbjct: 123 HLGTQDFPRLRLGIGKSDGSKDTIAHVLGKFSPSELPIVEKSLDLATEAIAHSLHHGIAK 182
Query: 180 FLNHIVS 186
++ +
Sbjct: 183 TMSLFNN 189
>gi|330722354|gb|EGH00210.1| Peptidyl-tRNA hydrolase [gamma proteobacterium IMCC2047]
Length = 197
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 67/188 (35%), Positives = 94/188 (50%), Gaps = 3/188 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G + + H KKFH ++ ++ + P
Sbjct: 7 LIVGLGNPGQQYEQTRHNAGAEFVSELVKSCHGELKADKKFHGLYAKIRVADQDCHCLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS+ + NFYK+P + LV HD+LD+ GT R K GG GHNGL+ I
Sbjct: 67 TTFMNRSGQSVAALANFYKIP-ADAILVAHDELDIAPGTARFKVDGGHGGHNGLRDIISH 125
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ +KRLR+GIG P D + ++ VL ER L ID R+LP +
Sbjct: 126 LNTRAFKRLRLGIGHPGDRSQVVDFVLKKAPKSERELLGASIDEAIRTLPEVITGNWNKA 185
Query: 181 LNHIVSVR 188
+
Sbjct: 186 QTLLNGFN 193
>gi|194434913|ref|ZP_03067158.1| peptidyl-tRNA hydrolase [Shigella dysenteriae 1012]
gi|194416846|gb|EDX32970.1| peptidyl-tRNA hydrolase [Shigella dysenteriae 1012]
Length = 194
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNTGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|291085269|ref|ZP_06352585.2| aminoacyl-tRNA hydrolase [Citrobacter youngae ATCC 29220]
gi|291071445|gb|EFE09554.1| aminoacyl-tRNA hydrolase [Citrobacter youngae ATCC 29220]
Length = 202
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P + KF S L+G L+
Sbjct: 12 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLRDEPKFFGYTSRVTLEGEDVRLLV 71
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 72 PTTFMNLSGKAVGAMASFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 130
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + ID AR +L K
Sbjct: 131 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEILFKDGLT 190
Query: 179 SFLNHIVSVR 188
+ + + +
Sbjct: 191 KATSRLHTFK 200
>gi|21230348|ref|NP_636265.1| peptidyl-tRNA hydrolase [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|24418602|sp|Q8PC61|PTH_XANCP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|21111901|gb|AAM40189.1| peptidyl tRNA hydrolase [Xanthomonas campestris pv. campestris str.
ATCC 33913]
Length = 193
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 64/189 (33%), Positives = 94/189 (49%), Gaps = 3/189 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D + K E ++ ++ G L+KP
Sbjct: 6 LIVGLGNPGPEHAQTRHNAGFRFVDALAERTGARWGLDSKLFGETAKAEIAGHTVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E LV HD+LDL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSITAALRFWKIEP-EQLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG + + +D +LPL
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGRDDDMAIGEAVDAAIDALPLALDGNFNEA 184
Query: 181 LNHIVSVRK 189
+ + + +K
Sbjct: 185 MKRLHTPKK 193
>gi|288904229|ref|YP_003429450.1| peptidyl-tRNA hydrolase [Streptococcus gallolyticus UCN34]
gi|306832489|ref|ZP_07465641.1| aminoacyl-tRNA hydrolase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325977206|ref|YP_004286922.1| peptidyl-tRNA hydrolase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288730954|emb|CBI12498.1| peptidyl-tRNA hydrolase [Streptococcus gallolyticus UCN34]
gi|304425389|gb|EFM28509.1| aminoacyl-tRNA hydrolase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325177134|emb|CBZ47178.1| pth [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
Length = 189
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 108/187 (57%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E RHNIGFM IDR+ ++K F AE+ ++G + L+K
Sbjct: 3 KMIVGLGNPGSKYHETRHNIGFMAIDRLAKDFNVTFSEEKNFKAEVGSCFINGEKVYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + ++E++LVI+DDLD++ G +RL+ G GHNG+KSI
Sbjct: 63 PTTFMNNSGIAVHALLTYYNI-DIEDFLVIYDDLDMEVGRIRLRQKGSAGGHNGIKSIIA 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + R+++GIGRP ++ HVLG F + + ++ + ++ + + V
Sbjct: 122 HTGTQAFDRIKVGIGRPKQGRSVVDHVLGKFDQDDYITVTNTLEKVNEAVQFYLQEADFV 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQKFN 188
>gi|262066062|ref|ZP_06025674.1| aminoacyl-tRNA hydrolase [Fusobacterium periodonticum ATCC 33693]
gi|291380313|gb|EFE87831.1| aminoacyl-tRNA hydrolase [Fusobacterium periodonticum ATCC 33693]
Length = 191
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 76/183 (41%), Positives = 110/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M IV GLGNPG +Y + RHNIGF+ +D + ++KF A ISE +DG + I K
Sbjct: 1 MKIVIGLGNPGKKYEKTRHNIGFIVVDSLRKKFNLTDEREKFQALISEKNIDGEKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG +L+E++NFYKL ++ +VI+DD+ LDFG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNALIEIINFYKLNPKKDIIVIYDDMSLDFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL-PLLAKREDVS 179
G+ + R++ GIG I HVLG FS E+ L+ ++ I + +L +
Sbjct: 121 HIGEEFIRIKCGIG--AKKEDAIEHVLGEFSLTEQKELVDFLEKINECVIEMLTVQNLER 178
Query: 180 FLN 182
+
Sbjct: 179 TMQ 181
>gi|145630433|ref|ZP_01786214.1| peptidyl-tRNA hydrolase [Haemophilus influenzae R3021]
gi|145638695|ref|ZP_01794304.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittII]
gi|144984168|gb|EDJ91605.1| peptidyl-tRNA hydrolase [Haemophilus influenzae R3021]
gi|145272290|gb|EDK12198.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittII]
gi|309750188|gb|ADO80172.1| Peptidyl-tRNA hydrolase [Haemophilus influenzae R2866]
Length = 194
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ + KF + L+G L+
Sbjct: 5 KLIVGLGNPGEKYADTRHNAGEWLIERLARRFNVSLNPENKFFGKTVRTLLNGKEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P + +VL S +R L ++D + ++ K V
Sbjct: 124 QLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEMIFKDGMV 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|116495979|ref|YP_807713.1| peptidyl-tRNA hydrolase [Lactobacillus casei ATCC 334]
gi|122262621|sp|Q034V1|PTH_LACC3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116106129|gb|ABJ71271.1| peptidyl-tRNA hydrolase [Lactobacillus casei ATCC 334]
Length = 185
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y ++HN+GFM +D + K +F A + +L+G + L+K
Sbjct: 1 MKMIVGLGNPGQKYAGSKHNMGFMVVDGLAKRLNLTIDKLEFDAATATTRLNGEKIFLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ E+M FY++ L+ V+ DD+DL G LRL+ G GHNG+K I
Sbjct: 61 PQTFMNASGRAVRELMMFYQI-QLDEIFVVQDDMDLTLGKLRLRKRGSAGGHNGIKDIIS 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + + RL+IGI P ++ VL FS ++ + I+ +L
Sbjct: 120 ATGSDEFCRLKIGIQHP-KRQRVVDWVLTPFSKTDQPLIDDAIEKADDALEDWLNGMPFD 178
Query: 179 SFLNHIV 185
+N
Sbjct: 179 QLMNKFN 185
>gi|300920401|ref|ZP_07136836.1| peptidyl-tRNA hydrolase [Escherichia coli MS 115-1]
gi|300412617|gb|EFJ95927.1| peptidyl-tRNA hydrolase [Escherichia coli MS 115-1]
Length = 194
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIIGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|300362408|ref|ZP_07058584.1| aminoacyl-tRNA hydrolase [Lactobacillus gasseri JV-V03]
gi|300353399|gb|EFJ69271.1| aminoacyl-tRNA hydrolase [Lactobacillus gasseri JV-V03]
Length = 185
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y + +HN GFM +D + + K KF ++ +++G I ++
Sbjct: 1 MKLIAGLGNPGKKYDQTKHNTGFMALDHYLNKNNLDLDKDKFEGLWTKQKINGEDVIFLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +V NF+K+ E+ LVIHDD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNDSGKSIAQVANFFKIAP-EDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RL+IGI P ++ VL F+ ++ + D + K ++
Sbjct: 120 CLGTNNFNRLKIGIRHP-QKESVVSWVLSPFNDEQQKLMDAAFDVSENIINDFIKGKNAQ 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNQYN 185
>gi|254302140|ref|ZP_04969498.1| aminoacyl-tRNA hydrolase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322332|gb|EDK87582.1| aminoacyl-tRNA hydrolase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 191
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 75/183 (40%), Positives = 111/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHNIGF+ ID + ++KF A +SE +DG + I K
Sbjct: 1 MKVVIGLGNPGKKYEKTRHNIGFIAIDNLRKKMNISDEREKFQALVSEKNIDGDKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG S++E++NFYKL ++ +VI+DD+DL FG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNSVIEIVNFYKLDPKKDIIVIYDDMDLSFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL-PLLAKREDVS 179
G+ + R++ GIG A + HVLG F+ E+ L I++ I + +L +
Sbjct: 121 HIGEEFIRIKCGIGAKEKGA--VEHVLGEFNQTEQKDLDEILEKINNCVIEMLTVQNLDR 178
Query: 180 FLN 182
+
Sbjct: 179 IMQ 181
>gi|319775677|ref|YP_004138165.1| peptidyl-tRNA hydrolase [Haemophilus influenzae F3047]
gi|317450268|emb|CBY86484.1| peptidyl-tRNA hydrolase [Haemophilus influenzae F3047]
Length = 194
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ + KF + + ++G L+
Sbjct: 5 KLIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LVIHD+LDL G +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPAGVAKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P + +VL S +R L ++D + ++ K V
Sbjct: 124 QLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEMIFKDGMV 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|312792830|ref|YP_004025753.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312179970|gb|ADQ40140.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 189
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 107/185 (57%), Gaps = 4/185 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+AGLGNPG Y RHN GF+ ID + F K KF + + G + +L+KP
Sbjct: 3 YIIAGLGNPGERYTFTRHNAGFLAIDYLAQFFNTKVDKIKFKGLVGSFEYSGKKVLLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG S++E +NFYK+ E +VI+DD+ D G ++++ G D GHNG+KSI ++
Sbjct: 63 MTYMNASGDSIIEAVNFYKIKP-EKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQR 121
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + R+RIGIG P ++++VL F E+ + I+ A + +L + +
Sbjct: 122 LGTEEFPRIRIGIGVP--KYDMVKYVLSEFEDGEKEKIFKAIEKAANGIKILLESDIDRA 179
Query: 181 LNHIV 185
+N+I
Sbjct: 180 MNYIN 184
>gi|167772370|ref|ZP_02444423.1| hypothetical protein ANACOL_03747 [Anaerotruncus colihominis DSM
17241]
gi|167665473|gb|EDS09603.1| hypothetical protein ANACOL_03747 [Anaerotruncus colihominis DSM
17241]
Length = 203
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I GLGNPG +Y RHN GF ++RI + KF + ++ G R +L+KP
Sbjct: 18 WIAVGLGNPGRDYENTRHNAGFCAVERIAGKCGVKIDRLKFKSLCADTTFGGQRVLLMKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ E M FYK+P E LV+ DD+ LD G LR++ G D GHNG+K++
Sbjct: 78 STFMNCSGEAVREAMQFYKIP-AERVLVLFDDVSLDPGRLRIRRQGSDGGHNGIKNMIYL 136
Query: 122 CGKN-YKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
GK+ + R++IG+G+ P + VLG F + + A + L+ + +
Sbjct: 137 TGKDTFPRIKIGVGKKPHPGYDLAAWVLGKFPKELADTMDKAYERAAEAAQLIIEGKIDE 196
Query: 180 FLNHIVS 186
+N +
Sbjct: 197 AMNRYNA 203
>gi|172040258|ref|YP_001799972.1| hypothetical protein cur_0578 [Corynebacterium urealyticum DSM
7109]
gi|171851562|emb|CAQ04538.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 215
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 110/189 (58%), Gaps = 6/189 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH----FFPAWKKKFHAEISEGQLDGLRTI 57
++V GLGNPG +Y RHNIG++ +D + + K+ ++ I + ++DG I
Sbjct: 24 WLVVGLGNPGAQYETTRHNIGYLAVDELLDDLTPMPGTLSAHKRTNSLICQTKIDGRSVI 83
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
+ + +++MNLSG ++ + F+K+P E+ +VIHD+LDLD +R+K GGG+ GHNGLKS
Sbjct: 84 IARARSYMNLSGGAIGALAKFFKIP-AEHVIVIHDELDLDPAAVRIKVGGGENGHNGLKS 142
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
++ G ++Y R+R+GIGRPP VL FS E +L + + A ++ L R
Sbjct: 143 TTQALGTRDYVRIRMGIGRPPGRMDPASFVLKPFSKQELEWLPLSLGDAADAVRLTVSRG 202
Query: 177 DVSFLNHIV 185
N I
Sbjct: 203 VAIAQNEIH 211
>gi|197120547|ref|YP_002132498.1| peptidyl-tRNA hydrolase [Anaeromyxobacter sp. K]
gi|238689897|sp|B4ULC2|PTH_ANASK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|196170396|gb|ACG71369.1| Aminoacyl-tRNA hydrolase [Anaeromyxobacter sp. K]
Length = 192
Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY RHN+GF+ DR+ KKF AE++E +L R ++K
Sbjct: 1 MKLVVGLGNPGEEYARTRHNVGFVVADRLAQLAGASFSAKKFAAELAEARLGPERVWIMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ + F+KL L++ +V+HDDL+LD ++LK GGG GHNG+KS++
Sbjct: 61 PQTYMNHSGEAVGAALRFWKL-GLDDLVVVHDDLELDPYRVQLKVGGGHGGHNGVKSVNA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G Y R+R+G+GRPP +VLG F+ E L ++ + L +
Sbjct: 120 HVGSPEYARVRVGVGRPPPRMDPADYVLGKFAKGEDAELDLCVEQAVEATRLAVELGAAR 179
Query: 180 FLNHIV 185
+N +
Sbjct: 180 AMNQVN 185
>gi|312128224|ref|YP_003993098.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor hydrothermalis 108]
gi|311778243|gb|ADQ07729.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor hydrothermalis 108]
Length = 189
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 108/185 (58%), Gaps = 4/185 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+AGLGNPG +Y RHN GF+ ID + K KF + + G + +L+KP
Sbjct: 3 YIIAGLGNPGEKYTFTRHNAGFLAIDYLAQLFNTKVDKIKFKGLVGSFEYAGKKVLLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S++E +NFYK+ E +VI+DD+ D G ++++ G D GHNG+KSI ++
Sbjct: 63 MTYMNASGESIIEAVNFYKIKP-EKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQR 121
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + R+RIGIG P ++++VL F E+ + I+ + + +L + +
Sbjct: 122 LGTEEFPRIRIGIGVP--KYDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDMDRA 179
Query: 181 LNHIV 185
+N+I
Sbjct: 180 MNYIN 184
>gi|145634610|ref|ZP_01790319.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittAA]
gi|145268155|gb|EDK08150.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittAA]
Length = 194
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ + KF + + ++G L+
Sbjct: 5 KLIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P + +VL S +R L ++D + ++ + V
Sbjct: 124 QLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEMIFRDGMV 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|171778201|ref|ZP_02919430.1| hypothetical protein STRINF_00269 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283025|gb|EDT48449.1| hypothetical protein STRINF_00269 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 189
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 106/187 (56%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E RHNIGFM IDR+ + K F AE+ ++G + L+K
Sbjct: 3 KMIVGLGNPGSKYHETRHNIGFMAIDRLAEDLNVTFSEDKNFKAEVGSAFINGEKVYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + +E+++VI+DDLD++ G +RL+ G GHNG+KSI
Sbjct: 63 PTTFMNNSGIAVHALLTYYNIA-IEDFMVIYDDLDMEVGRIRLRQKGSAGGHNGIKSIIA 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + R+++GIGRP ++ HVLG F + + ++ + ++ + + V
Sbjct: 122 HTGTQAFDRIKVGIGRPKQGRSVVDHVLGKFDKDDYITVTNTLEKVNDAVQFYLQEADFV 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQKFN 188
>gi|237731790|ref|ZP_04562271.1| peptidyl-tRNA hydrolase [Citrobacter sp. 30_2]
gi|226907329|gb|EEH93247.1| peptidyl-tRNA hydrolase [Citrobacter sp. 30_2]
Length = 194
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P + KF S L+G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLRDEPKFFGYTSRVTLEGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVGAMASFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + ID AR +L K
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEILFKDGLT 182
Query: 179 SFLNHIVSVR 188
+ + + +
Sbjct: 183 KATSRLHTFK 192
>gi|126658601|ref|ZP_01729747.1| peptidyl-tRNA hydrolase [Cyanothece sp. CCY0110]
gi|126620038|gb|EAZ90761.1| peptidyl-tRNA hydrolase [Cyanothece sp. CCY0110]
Length = 204
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 64/183 (34%), Positives = 102/183 (55%), Gaps = 4/183 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQL-DGLRTILIK 60
++ GLGNP +Y + RHNIGF +D + + ++F I+EG + + L+K
Sbjct: 14 LIVGLGNPEPKYDKTRHNIGFEMVDLLAESWGLSWKENRRFQGMIAEGNSRNNQKIYLLK 73
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQS+ V ++YKL + + LVI+DD+DL G +R++ G GHNG+KSI
Sbjct: 74 PLTYMNRSGQSVRAVTDWYKLAST-DVLVIYDDMDLSIGRIRMRLSGSAGGHNGMKSIIS 132
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ RLRIGIG+ + + HVLG F+ ER + + ++ K
Sbjct: 133 HLGGQDFPRLRIGIGKSNQLDNTVSHVLGRFAPEERTIINKTFPLVVDAIETSLKEGIEK 192
Query: 180 FLN 182
++
Sbjct: 193 AMS 195
>gi|322515788|ref|ZP_08068733.1| aminoacyl-tRNA hydrolase [Streptococcus vestibularis ATCC 49124]
gi|322125750|gb|EFX97068.1| aminoacyl-tRNA hydrolase [Streptococcus vestibularis ATCC 49124]
Length = 189
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 70/180 (38%), Positives = 109/180 (60%), Gaps = 3/180 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y E RHN+GFM ID + +++ F AE++ L+G + +K
Sbjct: 3 KLVVGLGNPGSKYHETRHNVGFMAIDLMAKELGLTFSEERTFKAEVASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG ++ ++ +Y +P +E+++VI+DDLD++ G LR + G GHNG+KSI
Sbjct: 63 PTTFMNLSGLAVRALLAYYNIP-MEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + + R++IGIGRP ++ HVLG FS + +L +D + +L K D
Sbjct: 122 ETGTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYSTILLTLDKVEAALNHYLKTNDFE 181
>gi|66769658|ref|YP_244420.1| peptidyl-tRNA hydrolase [Xanthomonas campestris pv. campestris str.
8004]
gi|81304387|sp|Q4URC3|PTH_XANC8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|66574990|gb|AAY50400.1| peptidyl tRNA hydrolase [Xanthomonas campestris pv. campestris str.
8004]
Length = 193
Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 64/189 (33%), Positives = 93/189 (49%), Gaps = 3/189 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D + K E ++ + G L+KP
Sbjct: 6 LIVGLGNPGPEHAQTRHNAGFRFVDALAERTGARWGLDSKLFGETAKADIAGHTVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E LV HD+LDL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSITAALRFWKIEP-EQLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG + + +D +LPL
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGRDDDMAIGEAVDAAIDALPLALDGNFNEA 184
Query: 181 LNHIVSVRK 189
+ + + +K
Sbjct: 185 MKRLHTPKK 193
>gi|332161445|ref|YP_004298022.1| peptidyl-tRNA hydrolase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325665675|gb|ADZ42319.1| peptidyl-tRNA hydrolase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330863242|emb|CBX73368.1| peptidyl-tRNA hydrolase [Yersinia enterocolitica W22703]
Length = 197
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLAQRHNQQLKEESKFFGYTARLNLAGQDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG++++ + FY++ E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 65 PSTFMNLSGKAVVAMAGFYRILP-EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + + VLG + E+ + ID R +L K +
Sbjct: 124 KFGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQTLIDDAIDESIRCTEVLLKEDIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 RAMNRLHSFK 193
>gi|295425672|ref|ZP_06818359.1| aminoacyl-tRNA hydrolase [Lactobacillus amylolyticus DSM 11664]
gi|295064688|gb|EFG55609.1| aminoacyl-tRNA hydrolase [Lactobacillus amylolyticus DSM 11664]
Length = 185
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 102/187 (54%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y +HN GFM +D + F K KF ++ +++G IL++
Sbjct: 1 MKLIAGLGNPGKKYDRTKHNTGFMALDHYLEENNFSLDKDKFEGLWTKQKINGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ +V+NF+K+ + + LVI DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNDSGRSIAQVVNFFKI-DPADILVIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGI P ++ VL F+ ++ + + + D
Sbjct: 120 DLGTEKFNRLKIGISHP-QKMTVVSWVLTPFNEEQQKLMDDAFETGTEIIDDFINGHDSQ 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNKYN 185
>gi|220915258|ref|YP_002490562.1| Aminoacyl-tRNA hydrolase [Anaeromyxobacter dehalogenans 2CP-1]
gi|254783847|sp|B8J804|PTH_ANAD2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219953112|gb|ACL63496.1| Aminoacyl-tRNA hydrolase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 192
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY RHN+GF+ DR+ KKF AE++E +L R ++K
Sbjct: 1 MKLVVGLGNPGEEYARTRHNVGFVVADRLAQLAGASFSAKKFAAELAEARLGPERVWIMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ + F+KL L++ +V+HDDL+LD ++LK GGG GHNG+KS++
Sbjct: 61 PQTYMNHSGEAVGAALRFWKL-GLDDLVVVHDDLELDPYRVQLKVGGGHGGHNGVKSVNA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G Y R+R+G+GRPP +VLG F+ E L ++ + L +
Sbjct: 120 HVGSPEYARVRVGVGRPPPRMDPADYVLGKFAKGEDAELDLCVEQAVEATRLAVELGAAR 179
Query: 180 FLNHIV 185
+N +
Sbjct: 180 AMNQVN 185
>gi|326803013|ref|YP_004320831.1| aminoacyl-tRNA hydrolase [Aerococcus urinae ACS-120-V-Col10a]
gi|326651183|gb|AEA01366.1| aminoacyl-tRNA hydrolase [Aerococcus urinae ACS-120-V-Col10a]
Length = 187
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 64/188 (34%), Positives = 105/188 (55%), Gaps = 3/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY RHNIGF+ ++ H + F+ + ++ + I +K
Sbjct: 1 MKLVVGLGNPGKEYEGTRHNIGFIVLNEWAYRHHESFDRSAFNGVYFKRRVANDQVIFVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQ + MN+Y + +LE+ LV++DD+D++ G LRL+ G GHNG+K I +
Sbjct: 61 PTTFMNLSGQCVSGFMNYYHI-DLEDLLVVYDDMDMEPGRLRLRKKGSAGGHNGMKDIIK 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
K+ +R+++G+G P ++ HVLG FS ++ +L A ++ +
Sbjct: 120 MLNSKDIQRIKLGVGHPKGKGSVVNHVLGKFSKEDQGKMLESSQAAADAISYWLEGNSFE 179
Query: 179 SFLNHIVS 186
+ +N +
Sbjct: 180 NTMNRFNN 187
>gi|282879730|ref|ZP_06288460.1| aminoacyl-tRNA hydrolase [Prevotella timonensis CRIS 5C-B1]
gi|281306399|gb|EFA98429.1| aminoacyl-tRNA hydrolase [Prevotella timonensis CRIS 5C-B1]
Length = 202
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 68/188 (36%), Positives = 97/188 (51%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY + RHN GF+ +D + ++ K + ++E + G + IL+KP
Sbjct: 4 YLICGLGNPGSEYADTRHNTGFIVLDALAKASNI-VFEDKRYGYVAETSIKGRKVILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + N LVI DD+ + G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENIEQH-NLLVISDDISIPLGEFRLKASGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G+NY RLR+GIG + VLG FSS E L P ID + +
Sbjct: 122 IGQNYPRLRMGIGSDFQRGGQVDWVLGRFSSEEVKILQPTIDIALELIKSFVLAGINITM 181
Query: 182 NHIVSVRK 189
N + K
Sbjct: 182 NQFNQLGK 189
>gi|294085759|ref|YP_003552519.1| aminoacyl-tRNA hydrolase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665334|gb|ADE40435.1| Aminoacyl-tRNA hydrolase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 215
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 80/187 (42%), Positives = 112/187 (59%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG EY RHN GFM +DRI H F WKKK + +SEG++ + IL+K
Sbjct: 1 MLVFVGLGNPGPEYAFQRHNAGFMAVDRIADQHGFSPWKKKHLSLMSEGRIGTEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ+FMN SG + E + FYK+ + + V HD+LDL +++K GGG GHNGL+ I
Sbjct: 61 PQSFMNKSGLPVAECIKFYKV-DPRSVFVFHDELDLGICRIKVKIGGGHGGHNGLRDIDR 119
Query: 121 KCGKNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERY-FLLPIIDNIARSLPLLAKREDV 178
G++Y R+RIGIGRPP + VL +FS E+ +L ++D IA L +D
Sbjct: 120 HLGQDYWRVRIGIGRPPVPAMDVRNWVLTDFSKDEQSGWLGRMLDAIADEAKRLVDGDDG 179
Query: 179 SFLNHIV 185
F++ +
Sbjct: 180 GFMSRVA 186
>gi|53804632|ref|YP_113533.1| peptidyl-tRNA hydrolase [Methylococcus capsulatus str. Bath]
gi|68052909|sp|Q60A14|PTH_METCA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|53758393|gb|AAU92684.1| peptidyl-tRNA hydrolase [Methylococcus capsulatus str. Bath]
Length = 187
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN GF IDR+ + H + +FH + L L+ P
Sbjct: 4 LIVGLGNPGPAYDRTRHNAGFWFIDRLAAAHGCVLREESRFHGRVGAINLT-EPVHLLAP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ + FYK+ E+ LV+HD+LD G +R+K GG GHNGL+ I +
Sbjct: 63 LTFMNRSGLAVAAMARFYKIAP-EHILVVHDELDFGPGVVRIKRDGGHGGHNGLRDIMAQ 121
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLRIGIGRP + + +VL S +R + I+ L L
Sbjct: 122 LGSGGFLRLRIGIGRPAGSMAVADYVLAAPSVSDRQAISGAIEKALACLSELLAGHVEQV 181
Query: 181 LNHIV 185
+N +
Sbjct: 182 MNRLH 186
>gi|148827596|ref|YP_001292349.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittGG]
gi|166199334|sp|A5UGR0|PTH_HAEIG RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148718838|gb|ABQ99965.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittGG]
Length = 194
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ + KF + ++G L+
Sbjct: 5 KLIVGLGNPGEKYADTRHNAGEWLIERLARRFNVSLNPESKFFGKTVRTLVNGKEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P + +VL S +R L ++D + ++ K +
Sbjct: 124 QLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRNALEKVLDEATDCVEMIFKDGMI 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|238797824|ref|ZP_04641317.1| Peptidyl-tRNA hydrolase [Yersinia mollaretii ATCC 43969]
gi|238718352|gb|EEQ10175.1| Peptidyl-tRNA hydrolase [Yersinia mollaretii ATCC 43969]
Length = 196
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H ++ KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEEAKFFGYTARLNLAGQDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG++++ + FY++ E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 65 PSTFMNLSGKAVVAMAGFYRILP-EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + ++ VLG + E+ + ID R +L
Sbjct: 124 KLGNNPNFYRLRIGIGHPGDKSKVVGFVLGKPPTSEQTLIDDAIDESIRCTEVLMTEGIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|168241369|ref|ZP_02666301.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194450126|ref|YP_002045828.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|238690687|sp|B4TKB3|PTH_SALHS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|194408430|gb|ACF68649.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205339480|gb|EDZ26244.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 194
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L+G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D + ++ VLG E+ + I AR L K
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKSKVVGFVLGKPPVSEQKLIDEAIYEAARCTELWFKEGLA 182
Query: 179 SFLNHIVSVR 188
+ + + +
Sbjct: 183 KATSRLHTFK 192
>gi|55820108|ref|YP_138550.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus LMG 18311]
gi|55821998|ref|YP_140439.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus CNRZ1066]
gi|116626978|ref|YP_819597.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus LMD-9]
gi|68052882|sp|Q5M222|PTH_STRT1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052883|sp|Q5M6L4|PTH_STRT2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|122268417|sp|Q03N21|PTH_STRTD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|55736093|gb|AAV59735.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus LMG 18311]
gi|55737983|gb|AAV61624.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus CNRZ1066]
gi|116100255|gb|ABJ65401.1| peptidyl-tRNA hydrolase [Streptococcus thermophilus LMD-9]
gi|312277423|gb|ADQ62080.1| Peptidyl-tRNA hydrolase [Streptococcus thermophilus ND03]
Length = 189
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 71/180 (39%), Positives = 109/180 (60%), Gaps = 3/180 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y E RHN+GFM ID + ++K F AE++ L+G + +K
Sbjct: 3 KLVVGLGNPGSKYHETRHNVGFMAIDLMAKELGLTFSEEKTFKAEVASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG ++ ++ +Y +P +E+++VI+DDLD++ G LR + G GHNG+KSI
Sbjct: 63 PTTFMNLSGLAVRALLAYYNIP-MEDFIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + + R++IGIGRP ++ HVLG FS + +L +D + +L K D
Sbjct: 122 ETGTQEFDRIKIGIGRPQKGMTVVNHVLGKFSEDDYAMILLTLDKVETALHHYLKTNDFE 181
>gi|317051468|ref|YP_004112584.1| peptidyl-tRNA hydrolase [Desulfurispirillum indicum S5]
gi|316946552|gb|ADU66028.1| peptidyl-tRNA hydrolase [Desulfurispirillum indicum S5]
Length = 191
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 71/183 (38%), Positives = 111/183 (60%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +RHNIGFM ++RI P++++KF + EG + +L+
Sbjct: 1 MKLIVGLGNPGAQYRNHRHNIGFMVVERIAQKLGVPSFRQKFSGLLGEGTFAQQKILLLM 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG S+ +V+ ++KL + + +VI DDLD+ +G +LK GG GHNG+ I+
Sbjct: 61 PQTYMNLSGDSVSQVLGWHKLSPV-DMIVIQDDLDMAYGRFKLKMGGSPGGHNGIADITR 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
KCG Y R + GIG+P + +HVL +FSS + L +++ A ++ A S
Sbjct: 120 KCGTPQYIRAKCGIGKPEPPMSVNQHVLSSFSSEQIQSLDSFLNHAAEAVLHSAAHGLES 179
Query: 180 FLN 182
+N
Sbjct: 180 AMN 182
>gi|322420137|ref|YP_004199360.1| peptidyl-tRNA hydrolase [Geobacter sp. M18]
gi|320126524|gb|ADW14084.1| peptidyl-tRNA hydrolase [Geobacter sp. M18]
Length = 188
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 77/182 (42%), Positives = 111/182 (60%), Gaps = 3/182 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GFM +DR+ +K F +G G R L+KP
Sbjct: 4 KLIVGLGNPGPKYTWTRHNAGFMVLDRLAGQSGIAVTRKAFSGLSGDGNWAGERVYLLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ E + FYKL +L + +VIHDDLD+ FG +RLK GGG GHNGL+S+ ++
Sbjct: 64 QTFMNLSGRSVAEALRFYKL-SLSDLIVIHDDLDIPFGKVRLKEGGGHGGHNGLRSLGQE 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G N + R+R+GIGRP ++ +VL NF+ E LL ++D ++ + K
Sbjct: 123 LGSNSFARVRVGIGRPMH-GDVVNYVLTNFAKEEMNELLEVLDTSLDAVEMTIKEGMPKA 181
Query: 181 LN 182
++
Sbjct: 182 MS 183
>gi|328949925|ref|YP_004367260.1| Peptidyl-tRNA hydrolase [Marinithermus hydrothermalis DSM 14884]
gi|328450249|gb|AEB11150.1| Peptidyl-tRNA hydrolase [Marinithermus hydrothermalis DSM 14884]
Length = 194
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 7/187 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG Y RHN+GFM +DR+ W+ + +A ++ L+KP
Sbjct: 4 FLIVGLGNPGPRYARTRHNVGFMILDRLDQDLGLD-WRTRGNALVARWGAG----WLMKP 58
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + +Y++P L LV+HDDLDL G LR + G G G+ SI
Sbjct: 59 LTYMNLSGEAVAPFVRYYRIP-LARLLVVHDDLDLPLGRLRFRARGSSGGQRGVASIIAH 117
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RL++GIGRPP VL F+ E + ++D A + + +
Sbjct: 118 LGSEAFPRLKVGIGRPPAGWSAPDWVLSPFNPEELPLVTRVVDRAAEGVRVWLEEGLARA 177
Query: 181 LNHIVSV 187
+
Sbjct: 178 QQRYNGL 184
>gi|50085940|ref|YP_047450.1| peptidyl-tRNA hydrolase [Acinetobacter sp. ADP1]
gi|68052955|sp|Q6F8I7|PTH_ACIAD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|49531916|emb|CAG69628.1| peptidyl-tRNA hydrolase [Acinetobacter sp. ADP1]
Length = 193
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 2/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++++ + K KFH GQ++G L+ P
Sbjct: 6 LIVGLGNPGAEYAQTRHNAGFWFVEQLADRYNITLKKDPKFHGFSGRGQIEGHDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS++ FY++ + E L+ HD+LD+D G +RLKTGGG GHNGL+ I
Sbjct: 66 TTFMNRSGQSVVPFSKFYQI-SPEAILIAHDELDMDPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG E+ + I + + LL + +
Sbjct: 125 IGANFHRLRIGIGHPGSKDRVSGHVLGKAPQNEQTLMEDAIHHALSNTRLLVDGQIAQAM 184
Query: 182 NHIVSVR 188
N I + +
Sbjct: 185 NQINAYK 191
>gi|323179281|gb|EFZ64851.1| peptidyl-tRNA hydrolase [Escherichia coli 1180]
Length = 190
Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 96/189 (50%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 1 MIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 61 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 119
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 120 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLTK 179
Query: 180 FLNHIVSVR 188
N + + +
Sbjct: 180 ATNRLHAFK 188
>gi|167766178|ref|ZP_02438231.1| hypothetical protein CLOSS21_00672 [Clostridium sp. SS2/1]
gi|317499347|ref|ZP_07957617.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 5_1_63FAA]
gi|167712258|gb|EDS22837.1| hypothetical protein CLOSS21_00672 [Clostridium sp. SS2/1]
gi|291560115|emb|CBL38915.1| peptidyl-tRNA hydrolase [butyrate-producing bacterium SSC/2]
gi|316893382|gb|EFV15594.1| peptidyl-tRNA hydrolase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 188
Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 74/190 (38%), Positives = 110/190 (57%), Gaps = 3/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF +D I K A I G + G + +L+K
Sbjct: 1 MKVIVGLGNPGKKYDNTRHNIGFEALDYIADKEGISINTGKHKALIGTGYMGGEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+SL +M+FYKL E++++IHDD+DLD G LR++ G GHNGLKSI
Sbjct: 61 PQTFMNLSGESLRPIMDFYKLEP-EDFIIIHDDIDLDVGRLRIRRKGSAGGHNGLKSIIS 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ R++IG+G P + +VLG+F+ E+ D + ++ L+ +
Sbjct: 120 HLGSMDFPRVKIGVGEKPKGYDLADYVLGHFTKEEQAIFAERFDEVYDAVQLIVMGDITE 179
Query: 180 FLNHIVSVRK 189
+N + +K
Sbjct: 180 AMNR-HNKKK 188
>gi|237743729|ref|ZP_04574210.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 7_1]
gi|260495793|ref|ZP_05815914.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 3_1_33]
gi|229432760|gb|EEO42972.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 7_1]
gi|260196640|gb|EEW94166.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 3_1_33]
Length = 191
Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 73/183 (39%), Positives = 110/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHN+GF+ +D + ++KF A +SE +DG + I K
Sbjct: 1 MKVVIGLGNPGKKYERTRHNMGFIAVDSLRKKFNLNDEREKFQALVSEKNIDGEKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG +++E++NFYKL ++ +VI+DD+DL FG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNAVIEIINFYKLDPKKDIIVIYDDMDLPFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS-LPLLAKREDVS 179
G+ + R++ GIG I HVLG F+ E+ L I++NI + +L +
Sbjct: 121 HIGEEFVRIKCGIG--EKEKDAIEHVLGEFNQTEQKNLDEILENIDNCIIEMLTVQNLDR 178
Query: 180 FLN 182
+
Sbjct: 179 IMQ 181
>gi|226354902|ref|YP_002784642.1| peptidyl-tRNA hydrolase [Deinococcus deserti VCD115]
gi|259535153|sp|C1CXT2|PTH_DEIDV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226316892|gb|ACO44888.1| putative Peptidyl-tRNA hydrolase [Deinococcus deserti VCD115]
Length = 220
Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 103/190 (54%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD---GLRTI 57
M +V GLGNPG +Y + RHN+G++ ++ + W+K+ AE++E +L G++ +
Sbjct: 1 MKLVVGLGNPGTQYAQTRHNVGWLVVNEVARRWGAT-WRKEKDAEVAEIRLGPAPGVKVL 59
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KPQTFMN SG++++ ++F+KL LV+ DDLD FG ++++ GG G NG++
Sbjct: 60 LVKPQTFMNASGKAVVPRLSFFKLDPGA-LLVVQDDLDSPFGLMKVRLGGRHGGQNGVRD 118
Query: 118 ISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
I G + RL++GI RPP VL + E+ L ++ A ++ A
Sbjct: 119 IIRLLGTEAFARLKLGISRPPAGRDPADWVLSRWRDEEQSTLGDLVRLGADAVERWATAG 178
Query: 177 DVSFLNHIVS 186
S
Sbjct: 179 LAEAQQAFNS 188
>gi|312134558|ref|YP_004001896.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor owensensis OL]
gi|311774609|gb|ADQ04096.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor owensensis OL]
Length = 189
Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 4/185 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+AGLGNPG Y RHN GF+ ID + F K KF + + G + +L+KP
Sbjct: 3 YIIAGLGNPGDRYTFTRHNAGFLTIDYLAQFFNTKVDKIKFKGLVGSFEYAGKKVLLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S+ E +NFYK+ E +VI+DD+ D G ++++ G D GHNG+KSI +
Sbjct: 63 MTYMNASGESIKEAVNFYKIKP-EKLIVIYDDIAFDVGIVKMRKKGSDGGHNGVKSIIQC 121
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + R+RIGIG P ++++VL F E+ + I+ + + +L + +
Sbjct: 122 LGTEEFPRIRIGIGIP--KYDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDRA 179
Query: 181 LNHIV 185
+N+I
Sbjct: 180 MNYIN 184
>gi|146311990|ref|YP_001177064.1| peptidyl-tRNA hydrolase [Enterobacter sp. 638]
gi|167011994|sp|A4WBD3|PTH_ENT38 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145318866|gb|ABP61013.1| peptidyl-tRNA hydrolase [Enterobacter sp. 638]
Length = 194
Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRINLAGADVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMATFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG S E+ + +D + +
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPSSEQKLIDEAVDEAVSCTEIWLQDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|163858318|ref|YP_001632616.1| peptidyl-tRNA hydrolase [Bordetella petrii DSM 12804]
gi|229620373|sp|A9I6W1|PTH_BORPD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|163262046|emb|CAP44348.1| pth [Bordetella petrii]
Length = 210
Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 96/189 (50%), Gaps = 6/189 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIKP 61
++AGLGNPG +Y RHN GF D + +K F +++ + G +L+KP
Sbjct: 19 LIAGLGNPGPDYETTRHNAGFWLADHLADDLRATFALEKSFFGMVAKARHAGENVLLVKP 78
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FYKL E LV+HD+LDL G ++LK GGG AGHNGLK I
Sbjct: 79 ITYMNRSGQAVGALARFYKLAP-EQVLVLHDELDLLPGQVKLKQGGGHAGHNGLKDIQAA 137
Query: 122 CG-KNYKRLRIGIGRP---PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G N+ RLRIGIG P + VL E+ + +I +P + +
Sbjct: 138 LGSPNFWRLRIGIGHPRTLGLAQQVADFVLHPPRRDEQTAIDDVIHRCRAVVPAMLDGDF 197
Query: 178 VSFLNHIVS 186
+ S
Sbjct: 198 ALATRQLHS 206
>gi|312869844|ref|ZP_07729985.1| aminoacyl-tRNA hydrolase [Lactobacillus oris PB013-T2-3]
gi|311094623|gb|EFQ52926.1| aminoacyl-tRNA hydrolase [Lactobacillus oris PB013-T2-3]
Length = 186
Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 69/188 (36%), Positives = 108/188 (57%), Gaps = 5/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM +D++ + A+ K A + G ++G + +L+
Sbjct: 1 MKMIVGLGNIGSRYDETRHNTGFMVVDQLARDYQLGAFSHLKQEAVAASGIINGEKVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ ++++Y L +L + +V++DDLD+ G +RLKT G GHNGLKSI
Sbjct: 61 KPTTFMNDSGRAVGPLVDYYGL-DLADLVVVNDDLDMPVGRVRLKTHGASGGHNGLKSII 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED- 177
G K++ R+++GI P ++ HVLG F+ ER ++ +L K ED
Sbjct: 120 NALGTKDFNRVKLGIDHPQH-GTVVSHVLGKFTPEERPRFDDAVERAEHALEDWIKGEDF 178
Query: 178 VSFLNHIV 185
+N
Sbjct: 179 AQLMNDYN 186
>gi|218248401|ref|YP_002373772.1| aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 8801]
gi|257061467|ref|YP_003139355.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 8802]
gi|218168879|gb|ACK67616.1| Aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 8801]
gi|256591633|gb|ACV02520.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 8802]
Length = 202
Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 102/187 (54%), Gaps = 4/187 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDG-LRTILIK 60
++ GLGNP +Y + RHNIGF ID + + ++F +EG G + L+K
Sbjct: 12 LIIGLGNPEVKYDKTRHNIGFEVIDALAETWQLSLKENRRFQGLFAEGMARGNHKIYLLK 71
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQS+ V ++YKL LVI+DD+DL G +R++ G GHNG+KSI
Sbjct: 72 PLTYMNRSGQSVRAVSDWYKLYPNS-MLVIYDDMDLPVGRMRMRLEGSAGGHNGMKSIIS 130
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ RLR+GIG+ + I HVLG F+ E+ + ++ ++ + K
Sbjct: 131 HVGSQDFPRLRLGIGKSNQSKETISHVLGKFAPQEQEIIAKVLSLAVDAVEMSLKEGVAK 190
Query: 180 FLNHIVS 186
++ +
Sbjct: 191 AMSLYNN 197
>gi|319898084|ref|YP_004136281.1| peptidyl-tRNA hydrolase [Haemophilus influenzae F3031]
gi|317433590|emb|CBY81974.1| peptidyl-tRNA hydrolase [Haemophilus influenzae F3031]
Length = 194
Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ + KF + + ++G L+
Sbjct: 5 KLIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LVIHD+LDL GT +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P + +VL S +R L ++D + ++ + +
Sbjct: 124 QLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRNALEKVLDEATDCVEMIFRDGMI 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|261340158|ref|ZP_05968016.1| aminoacyl-tRNA hydrolase [Enterobacter cancerogenus ATCC 35316]
gi|288317673|gb|EFC56611.1| aminoacyl-tRNA hydrolase [Enterobacter cancerogenus ATCC 35316]
Length = 194
Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF+ S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFYGYTSRINLAGADVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMATFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + +D R + +
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAVDEAVRCTEIWLQDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|116628944|ref|YP_814116.1| peptidyl-tRNA hydrolase [Lactobacillus gasseri ATCC 33323]
gi|238853543|ref|ZP_04643915.1| aminoacyl-tRNA hydrolase [Lactobacillus gasseri 202-4]
gi|282852619|ref|ZP_06261961.1| aminoacyl-tRNA hydrolase [Lactobacillus gasseri 224-1]
gi|311111247|ref|ZP_07712644.1| aminoacyl-tRNA hydrolase [Lactobacillus gasseri MV-22]
gi|122274058|sp|Q046E4|PTH_LACGA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116094526|gb|ABJ59678.1| peptidyl-tRNA hydrolase [Lactobacillus gasseri ATCC 33323]
gi|238833839|gb|EEQ26104.1| aminoacyl-tRNA hydrolase [Lactobacillus gasseri 202-4]
gi|282556361|gb|EFB61981.1| aminoacyl-tRNA hydrolase [Lactobacillus gasseri 224-1]
gi|311066401|gb|EFQ46741.1| aminoacyl-tRNA hydrolase [Lactobacillus gasseri MV-22]
Length = 185
Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y + +HN GFM +D S + K KF ++ +++G I ++
Sbjct: 1 MKLIAGLGNPGKKYDQTKHNTGFMALDHYLSKNNLDLDKDKFEGLWTKQKVNGEDVIFLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +V NF+K+ E+ LVIHDD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNDSGKSIAQVANFFKIAP-EDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RL+IGI P ++ VL F+ ++ + + + K ++
Sbjct: 120 CLGTNNFNRLKIGIRHP-QKESVVSWVLSPFNDEQQKLMDAAFEVSENIINDFIKGKNAQ 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNQYN 185
>gi|323706236|ref|ZP_08117803.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum LX-11]
gi|323534400|gb|EGB24184.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 190
Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 75/183 (40%), Positives = 111/183 (60%), Gaps = 4/183 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+IV GLGNPG EY + RHN+GF ID + K KF + I EG G + +L K
Sbjct: 1 MYIVVGLGNPGKEYEKTRHNVGFEVIDSLSKKLDIAVNKIKFKSLIGEGIYKGEKIVLQK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ ++++FYKLP L N +V++DD DLD G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNSSGEAVYDIVDFYKLP-LSNLIVVYDDKDLDVGKIRVRKKGSAGGHNGMKSIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ R+R+GIG+P +I+HVLG F + + IDN A ++ + +
Sbjct: 120 ILNSEDFPRVRLGIGKP--KGDMIQHVLGKFEGRDMDIVANSIDNAANAVLDIIENGVEH 177
Query: 180 FLN 182
+N
Sbjct: 178 AMN 180
>gi|284051522|ref|ZP_06381732.1| peptidyl-tRNA hydrolase [Arthrospira platensis str. Paraca]
gi|291569168|dbj|BAI91440.1| peptidyl-tRNA hydrolase [Arthrospira platensis NIES-39]
Length = 201
Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 68/192 (35%), Positives = 104/192 (54%), Gaps = 9/192 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGL-RTILIK 60
++ GLGNPG +Y RHNIGF +D + + ++F E ++ + L+K
Sbjct: 7 LIVGLGNPGSKYDRTRHNIGFEAVDFLADKWGANLSENRRFQGVFGEAKMRSHNKLYLLK 66
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ V+++YKLP E+ LVI+DD+DL G LRL+ G GHNG+KS
Sbjct: 67 PLTYMNRSGQAIRSVVDWYKLPP-ESVLVIYDDMDLPVGRLRLRLSGSAGGHNGMKSAIA 125
Query: 121 KCG-KNYKRLRIGIGRPPDTA-----HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G +N+ RLR+GI +P A I HVLG F ER + ++ + ++ L +
Sbjct: 126 HLGTQNFPRLRLGIDKPQPPASSSDRETISHVLGKFPPNERQTMDKLLQQVLEAIELALE 185
Query: 175 REDVSFLNHIVS 186
++ S
Sbjct: 186 DGVEKAMSLYNS 197
>gi|239930783|ref|ZP_04687736.1| peptidyl-tRNA hydrolase [Streptomyces ghanaensis ATCC 14672]
gi|291439150|ref|ZP_06578540.1| peptidyl-tRNA hydrolase [Streptomyces ghanaensis ATCC 14672]
gi|291342045|gb|EFE69001.1| peptidyl-tRNA hydrolase [Streptomyces ghanaensis ATCC 14672]
Length = 200
Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 75/191 (39%), Positives = 107/191 (56%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLD-----GLR 55
+++ GLGNPG EY NRHN+GFM D + + K A++ EG++ R
Sbjct: 11 WLIVGLGNPGPEYAMNRHNVGFMVADLLAERMGGRFKRAGKAQAQVVEGRIGPPGPANRR 70
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L KP ++MNLSG + + FYK+P + +HD+LD+ +G LRLK GGGD GHNGL
Sbjct: 71 VVLAKPMSYMNLSGGPVNALREFYKVPVAHV-VAVHDELDIGYGVLRLKLGGGDNGHNGL 129
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G +Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 130 KSMTKAFGADYHRVRFGIGRPPGRMQVADFVLRDFSSAERKELDYFVDRAADAVECLVSE 189
Query: 176 EDVSFLNHIVS 186
+ S
Sbjct: 190 GLERAQSAYNS 200
>gi|123442673|ref|YP_001006650.1| peptidyl-tRNA hydrolase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|166229466|sp|A1JRW1|PTH_YERE8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|122089634|emb|CAL12484.1| peptidyl-tRNA hydrolase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 197
Score = 227 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 72/190 (37%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLALRHNQQLKEESKFFGYTARLNLAGQDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 65 PSTFMNLSGKAVAAMAGFYRILP-EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + + VLGN + E+ + ID R +L K +
Sbjct: 124 KLGNNPNFYRLRIGIGHPGDKSKVTGFVLGNPPASEQTLIDDAIDESIRCTEVLLKEDIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|283785507|ref|YP_003365372.1| Peptidyl-tRNA hydrolase [Citrobacter rodentium ICC168]
gi|282948961|emb|CBG88564.1| Peptidyl-tRNA hydrolase [Citrobacter rodentium ICC168]
Length = 194
Score = 227 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEAKFFGYTSRVTLAGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ N + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVGAMASFYRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + ID AR + +
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEVWFRDGLA 182
Query: 179 SFLNHIVSVR 188
+ + + +
Sbjct: 183 KATSRLHTFK 192
>gi|237738935|ref|ZP_04569416.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 2_1_31]
gi|229423535|gb|EEO38582.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 2_1_31]
Length = 191
Score = 227 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 73/183 (39%), Positives = 109/183 (59%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHNIGF+ +D + ++KF A ISE +DG + I K
Sbjct: 1 MKVVIGLGNPGKKYEKTRHNIGFIVVDSLRKKFNLTDEREKFQALISEKNIDGEKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG +L+E++NFYKL ++ +VI+DD+ LDFG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNALIEIVNFYKLDPKKDIIVIYDDMSLDFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL-PLLAKREDVS 179
G+ + R++ GIG + HVLG FS E+ L+ ++ + + +L
Sbjct: 121 HIGEEFIRIKCGIG--AKKEDAVEHVLGEFSQSEQKELVEFLEKLNECVIEMLTVHNLDR 178
Query: 180 FLN 182
+
Sbjct: 179 TMQ 181
>gi|291518348|emb|CBK73569.1| peptidyl-tRNA hydrolase [Butyrivibrio fibrisolvens 16/4]
Length = 189
Score = 227 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 61/190 (32%), Positives = 103/190 (54%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNP +Y RHN+GF ID I K+ + +G ++G + IL K
Sbjct: 1 MYLIVGLGNPERKYDGTRHNVGFEAIDAISKKFGIEVNHKEHKGLVGKGIINGKKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+ +L + ++Y++ +VI DD+ L G +R++ G GHNGLK+I
Sbjct: 61 PQTYMNLSGECVLPLTDYYEIDPSTEMVVISDDVLLSTGNIRVRKKGSAGGHNGLKNIIA 120
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + R+R+G+G + ++ HVLG + +R + ++ + ++ L + S
Sbjct: 121 LIGSNEFPRIRVGVGECEN-GDMVSHVLGRYDKEDRERVDASMEKVIGAVELFLDGDLDS 179
Query: 180 FLNHIVSVRK 189
+N K
Sbjct: 180 AMNKYNVKEK 189
>gi|227888874|ref|ZP_04006679.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii ATCC 33200]
gi|227850567|gb|EEJ60653.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii ATCC 33200]
Length = 185
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 106/187 (56%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y + +HN GFM +D + K KF ++ +++G I ++
Sbjct: 1 MKLIAGLGNPGRKYDQTKHNTGFMALDHYLEKNGLTLDKDKFEGLWTKQKINGEDVIFLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +V NF+K+ E+ LVIHDD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNDSGKSIAQVANFFKIKP-EDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RL+IGI P + ++ VL F++ ++ + + + K ++
Sbjct: 120 CLGTNNFNRLKIGIRHPEN-ESVVSWVLSPFNNDQQKLMDTAFETSENVINDFIKGKNAQ 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNQYN 185
>gi|285017304|ref|YP_003375015.1| peptidyl-tRNA hydrolase (pth) protein [Xanthomonas albilineans GPE
PC73]
gi|283472522|emb|CBA15027.1| probable peptidyl-trna hydrolase (pth) protein [Xanthomonas
albilineans]
Length = 194
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 64/188 (34%), Positives = 97/188 (51%), Gaps = 3/188 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN GF +D + + + K EI++ + G L+KP
Sbjct: 6 LIVGLGNPGAEHANTRHNAGFRFVDHLLQQAGARWSVEAKLFGEIAKVDVAGQSVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ + ++K+ + L HDDLDL GT+RLK GG G NGL+
Sbjct: 66 ATYMNLSGKSVTAALRYWKIEPAQALL-AHDDLDLAPGTVRLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLRIGIG P ++ VL S ++ + ID+ LPL + +
Sbjct: 125 LGHAGFHRLRIGIGHPGHKDKVVPWVLSRASQADQILIDRAIDDALAVLPLAVQGDFNEA 184
Query: 181 LNHIVSVR 188
+ + + R
Sbjct: 185 MKRLHTSR 192
>gi|328473490|gb|EGF44338.1| peptidyl-tRNA hydrolase [Vibrio parahaemolyticus 10329]
Length = 196
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + H + KF ++G L+
Sbjct: 6 KLLVGLANPGPEYAKTRHNAGAWVVEELARVHNVTLKNEPKFFGLTGRIMVNGQDLRLLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E +V HD+LDL G + K GGG GHNGL+
Sbjct: 66 PTTFMNLSGKAIAALAKFYQIKP-EEIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDTIS 124
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G K++ RLRIGIG P + VLG + E+ L D R L +L K
Sbjct: 125 KLGNNKDFYRLRIGIGHPGHKDKVAGFVLGKAPAKEQELLDAAADEAVRCLDILIKDGLS 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|311279346|ref|YP_003941577.1| peptidyl-tRNA hydrolase [Enterobacter cloacae SCF1]
gi|308748541|gb|ADO48293.1| peptidyl-tRNA hydrolase [Enterobacter cloacae SCF1]
Length = 194
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P + KF S + G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLAERFRAPLREESKFFGYTSRINVAGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + F+++ E LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMATFFRIAPDE-ILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P D ++ VLG E+ + +D R + K
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPLSEQKLIDEAVDEATRCTEIWLKDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|269138750|ref|YP_003295451.1| peptidyl-tRNA hydrolase [Edwardsiella tarda EIB202]
gi|267984411|gb|ACY84240.1| peptidyl-tRNA hydrolase [Edwardsiella tarda EIB202]
gi|304558743|gb|ADM41407.1| Peptidyl-tRNA hydrolase [Edwardsiella tarda FL6-60]
Length = 196
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + L G L+
Sbjct: 4 KLIVGLANPGAEYAQTRHNAGAWFVDALAERHGQSLKEESKFFGYTARLSLAGHDLRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E LV HD+LDL G +LK GGG+ GHNGLK I
Sbjct: 64 PTTFMNLSGKAVSALAGFYRIAPDE-ILVAHDELDLPPGVAKLKLGGGNGGHNGLKDIQS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + ++ VLG + E+ + ID R LL +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKSKVVGFVLGKPLASEQPLIDEAIDEALRCTDLLMQEGMD 182
Query: 179 SFLNHIVSVR 188
+N + +
Sbjct: 183 RAMNRLNGFK 192
>gi|157370226|ref|YP_001478215.1| peptidyl-tRNA hydrolase [Serratia proteamaculans 568]
gi|167011997|sp|A8GD97|PTH_SERP5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157321990|gb|ABV41087.1| Aminoacyl-tRNA hydrolase [Serratia proteamaculans 568]
Length = 196
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF+ + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLAQRHNQQLKEESKFYGYTARLNLAGNDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++L + NFY++ E LV HD+LD+ G ++K GGG+ GHNGLK I
Sbjct: 65 PTTFMNLSGKAVLAMANFYRIEPDE-ILVAHDELDIPPGVAKIKLGGGNGGHNGLKDIQS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG + E+ + ID AR +L
Sbjct: 124 KFGNNPNFYRLRIGIGHPGDKNKVVGFVLGKPPASEQKMIDEAIDEAARCTEILLTDGLE 183
Query: 179 SFLNHIVSVR 188
+ + S +
Sbjct: 184 KTVRRLHSFK 193
>gi|222152153|ref|YP_002561313.1| peptidyl-tRNA hydrolase [Macrococcus caseolyticus JCSC5402]
gi|254783875|sp|B9E8U9|PTH_MACCJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|222121282|dbj|BAH18617.1| peptidyl-tRNA hydrolase [Macrococcus caseolyticus JCSC5402]
Length = 189
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G +Y RHNIGFM +DR+ + ++KF + ++G + +LI+
Sbjct: 1 MKCIVGLGNIGKKYELTRHNIGFMVVDRLVESYNLELNQQKFKGLYAIAMINGEKVLLIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ +M+++ + + E+ LV++DDLD+ G LRL+ G GHNG++S+ +
Sbjct: 61 PMTYMNSSGEAVRPLMDYFNV-STEDLLVLYDDLDMPPGRLRLRQKGSAGGHNGIRSLIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G + +KR+RIGIGRP ++ VL F+ E + +I+ +++ E
Sbjct: 120 HLGTDQFKRIRIGIGRPTGHLKVVDFVLQKFTPDEMIVMDKVINQTIKAVEAFIAGERFE 179
Query: 179 SFLNHIV 185
+ +N
Sbjct: 180 NIMNQYN 186
>gi|145632641|ref|ZP_01788375.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 3655]
gi|144986836|gb|EDJ93388.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 3655]
gi|309972447|gb|ADO95648.1| Peptidyl-tRNA hydrolase [Haemophilus influenzae R2846]
Length = 194
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ + KF + + ++G L+
Sbjct: 5 KLIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LVIHD+LDL G +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALANFYRIKP-EEILVIHDELDLPAGIAKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P + +VL S +R L ++D + ++ K V
Sbjct: 124 QLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRNALEKVLDEATDCVEMIFKDGMV 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|260582342|ref|ZP_05850135.1| peptidyl-tRNA hydrolase [Haemophilus influenzae NT127]
gi|260094710|gb|EEW78605.1| peptidyl-tRNA hydrolase [Haemophilus influenzae NT127]
Length = 194
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ + KF + + ++G L+
Sbjct: 5 KLIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LVIHD+LDL G +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALANFYRIKP-EEILVIHDELDLPAGIAKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P + +VL S +R L ++D + ++ K +
Sbjct: 124 QLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRNALEKVLDEATDCVEMIFKDGMI 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|94264422|ref|ZP_01288212.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
gi|93455179|gb|EAT05397.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
Length = 196
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 74/191 (38%), Positives = 112/191 (58%), Gaps = 3/191 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILI 59
M +VAGLGNPG +Y + RHNIGF+ ID + H + K+ A G L G +L+
Sbjct: 1 MRLVAGLGNPGAKYEDTRHNIGFLFIDHLARRHGISLKEESKWEAASGRGTLWGQPVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+++ + FY++ E V HD+LDL FG+ R+ G G GHNG++S+
Sbjct: 61 KPLTYMNLSGRAVGRLARFYRI-EAEAVAVFHDELDLPFGSARVAKGRGAGGHNGVRSLI 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G +++ R R+G+GRPP+ +VL +FS ER L + + L LL R++
Sbjct: 120 DHLGSRDFVRFRLGVGRPPEQHPTAGYVLSSFSPAERQALPDLFALLEEGLQLLLTRDEK 179
Query: 179 SFLNHIVSVRK 189
+ +N I + K
Sbjct: 180 AAMNLINATTK 190
>gi|262394977|ref|YP_003286831.1| peptidyl-tRNA hydrolase [Vibrio sp. Ex25]
gi|269965460|ref|ZP_06179579.1| Peptidyl-tRNA hydrolase [Vibrio alginolyticus 40B]
gi|262338571|gb|ACY52366.1| peptidyl-tRNA hydrolase [Vibrio sp. Ex25]
gi|269829939|gb|EEZ84169.1| Peptidyl-tRNA hydrolase [Vibrio alginolyticus 40B]
Length = 196
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G ++ + H + KF ++G L+
Sbjct: 6 KLLVGLANPGPEYARTRHNAGAWVVEELARVHNVTLKNEPKFFGLTGRIMVNGQDLRLLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + FY++ E +V HD+LDL G + K GGG GHNGL+
Sbjct: 66 PTTFMNLSGKSIAALAKFYQIKP-EEIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDTIS 124
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G K++ RLRIGIG P + VLG + E+ L D R L +L K
Sbjct: 125 KLGNNKDFYRLRIGIGHPGHKDKVAGFVLGKAPAKEQELLDAAADEAVRCLDILIKDGLS 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|256028189|ref|ZP_05442023.1| peptidyl-tRNA hydrolase [Fusobacterium sp. D11]
gi|289766121|ref|ZP_06525499.1| peptidyl-tRNA hydrolase [Fusobacterium sp. D11]
gi|289717676|gb|EFD81688.1| peptidyl-tRNA hydrolase [Fusobacterium sp. D11]
Length = 191
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 73/183 (39%), Positives = 110/183 (60%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHN+GF+ +D + ++KF A +SE +DG + I K
Sbjct: 1 MKVVIGLGNPGKKYERTRHNMGFIAVDSLRKKFNLNDEREKFQALVSEKNIDGEKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG +++E++NFYKL ++ +VI+DD+DL FG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNAVIEIINFYKLDPKKDIIVIYDDMDLPFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS-LPLLAKREDVS 179
G+ + R++ GIG I HVLG F+ E+ L I++NI + +L +
Sbjct: 121 HIGEEFVRIKCGIG--EKEKDAIEHVLGEFNQTEQKNLDEILENINNCIIEMLTVQNLDR 178
Query: 180 FLN 182
+
Sbjct: 179 IMQ 181
>gi|261253603|ref|ZP_05946176.1| peptidyl-tRNA hydrolase [Vibrio orientalis CIP 102891]
gi|260936994|gb|EEX92983.1| peptidyl-tRNA hydrolase [Vibrio orientalis CIP 102891]
Length = 212
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G ++ + H + KF ++G L+
Sbjct: 22 KLLVGLANPGPEYARTRHNAGAWVVEELARVHNVTLKNEAKFFGLTGRIMVNGQDLRLLI 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E +V HD+LDL G + K GGG GHNGL+
Sbjct: 82 PTTFMNLSGKAIAALAKFYQIKP-EEIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDTIS 140
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G K++ RLRIGIG P + VLG + E+ L D R L +L K
Sbjct: 141 KLGNNKDFYRLRIGIGHPGHKDKVAGFVLGKAPAKEQELLDAAADESVRCLDILIKDGLS 200
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 201 KAQNRLHTFK 210
>gi|329666672|gb|AEB92620.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii DPC 6026]
Length = 185
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y + +HN GFM +D + K KF ++ ++G I ++
Sbjct: 1 MKLIAGLGNPGRKYDQTKHNTGFMALDHYLEKNGLTLDKNKFDGLWTKQNINGEDVIFLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +V NF+K+ E+ LVIHDD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNDSGKSIAQVANFFKIKP-EDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RL+IGI P + ++ VL F++ ++ + + + K ++
Sbjct: 120 CLGTNNFNRLKIGIRHPEN-ESVVSWVLSPFNNDQQKLMDAAFETSENVINDFIKGKNAQ 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNQYN 185
>gi|315172644|gb|EFU16661.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1346]
Length = 188
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y E +HNIGF+ +D I F A+I+E + + +L+K
Sbjct: 1 MKVIVGLGNPGSKYKETKHNIGFITLDEIAYRQNISFNNSNFEADIAEFFIGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++ ++ + + E+ +VI+DDLDL+ G +RL+ G GHNG+KS+
Sbjct: 61 PLTFMNESGRSVGPLLTYFGV-DEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G N + R++IGIGRP +I HVL F +L + A + + V
Sbjct: 120 HLGTNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADAALYACEGHTFV 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 ETMNQFN 186
>gi|312623039|ref|YP_004024652.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203506|gb|ADQ46833.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor kronotskyensis 2002]
Length = 189
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 107/185 (57%), Gaps = 4/185 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+AGLGNPG +Y RHN GF+ ID + K KF + + G + +L+KP
Sbjct: 3 YIIAGLGNPGEKYIFTRHNAGFLAIDYLAQLFNTKVDKIKFKGLVGSFEYAGKKVLLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S++E +NFYK+ E +VI+DD+ D G ++++ G D GHNG+KSI +
Sbjct: 63 MTYMNASGESIIEAVNFYKIKT-EKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQC 121
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + R+RIGIG P ++++VL F E+ + I+ + + +L + +
Sbjct: 122 LGTEEFPRIRIGIGVP--KYDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDRA 179
Query: 181 LNHIV 185
+N+I
Sbjct: 180 MNYIN 184
>gi|169634105|ref|YP_001707841.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii SDF]
gi|169796982|ref|YP_001714775.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AYE]
gi|184157105|ref|YP_001845444.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii ACICU]
gi|215484444|ref|YP_002326677.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AB307-0294]
gi|239501214|ref|ZP_04660524.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AB900]
gi|294838726|ref|ZP_06783409.1| peptidyl-tRNA hydrolase [Acinetobacter sp. 6013113]
gi|294842362|ref|ZP_06787045.1| peptidyl-tRNA hydrolase [Acinetobacter sp. 6014059]
gi|294859080|ref|ZP_06796849.1| peptidyl-tRNA hydrolase [Acinetobacter sp. 6013150]
gi|301348150|ref|ZP_07228891.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AB056]
gi|301512835|ref|ZP_07238072.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AB058]
gi|301596893|ref|ZP_07241901.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AB059]
gi|226694244|sp|B0VTX2|PTH_ACIBS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226723243|sp|B7GYR0|PTH_ACIB3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238688122|sp|B0V8G0|PTH_ACIBY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238690973|sp|B2HUM2|PTH_ACIBC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169149909|emb|CAM87803.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AYE]
gi|169152897|emb|CAP01935.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii]
gi|183208699|gb|ACC56097.1| Peptidyl-tRNA hydrolase [Acinetobacter baumannii ACICU]
gi|213986343|gb|ACJ56642.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AB307-0294]
gi|322507004|gb|ADX02458.1| Peptidyl-tRNA hydrolase [Acinetobacter baumannii 1656-2]
gi|323516871|gb|ADX91252.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii TCDC-AB0715]
Length = 193
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 2/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++++ + KFH G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS++ FY++ E L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 MTYMNRSGQSVVPFSKFYQIAP-EAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG S E+ + ID+ + LL + + +
Sbjct: 125 IGPNFHRLRIGIGHPGSKERVSGHVLGKAPSSEQSLMDGAIDHALSKVKLLVQGQVPQAM 184
Query: 182 NHIVSVR 188
N I + +
Sbjct: 185 NQINAYK 191
>gi|268318832|ref|YP_003292488.1| aminoacyl-tRNA aminoacylhydrolase [Lactobacillus johnsonii FI9785]
gi|262397207|emb|CAX66221.1| aminoacyl-tRNA aminoacylhydrolase [Lactobacillus johnsonii FI9785]
Length = 185
Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y + +HN GFM +D + K KF ++ +++G I ++
Sbjct: 1 MKLIAGLGNPGRKYDQTKHNTGFMALDHYLEKNGLTLDKDKFEGLWTKQKINGEDVIFLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +V NF+K+ E+ LVIHDD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNDSGKSIAQVANFFKIKP-EDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RL+IGI P + ++ VL F++ ++ + + + K +
Sbjct: 120 CLGTNNFNRLKIGIRHPKN-ESVVSWVLSPFNNDQQKLMDTAFETSENVINDFIKGNNAQ 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNQYN 185
>gi|37679109|ref|NP_933718.1| peptidyl-tRNA hydrolase [Vibrio vulnificus YJ016]
gi|37197851|dbj|BAC93689.1| Peptidyl-tRNA hydrolase [Vibrio vulnificus YJ016]
gi|224184702|gb|ACN39577.1| Pth [Vibrio vulnificus]
Length = 211
Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + H + KF+ ++G L+
Sbjct: 21 KLLVGLANPGPEYAKTRHNAGAWVVEELARVHNITLKNEAKFYGLTGRIVMNGQELRLLI 80
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E +V HD+LDL G + K GGG GHNGL+
Sbjct: 81 PTTFMNLSGKAIAALAKFYQI-QPEEIMVAHDELDLPPGIAKFKKGGGHGGHNGLRDTIS 139
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P + VLG + E+ L +D R L +L K
Sbjct: 140 KLGNNKEFYRLRIGIGHPGHKDKVAGFVLGKAPASEQSLLDATVDESVRCLDILIKDGLS 199
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 200 KAQNRLHTFK 209
>gi|255582564|ref|XP_002532065.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
gi|223528269|gb|EEF30320.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
Length = 217
Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats.
Identities = 68/174 (39%), Positives = 93/174 (53%), Gaps = 3/174 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF ID P K A EG + +L KP
Sbjct: 18 WLIVGLGNPGDKYKGTRHNVGFEMIDAFAQLLQIPMDKLHSKAIFGEGFVGEASVLLAKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S + +YKLP L +V+HDD+DL G LRL+ GG HNGLKS+
Sbjct: 78 QTYMNLSGESAGPLAAYYKLP-LNRVIVLHDDMDLPCGVLRLQPKGGHGSHNGLKSVIHH 136
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
+ + RLRIGIGRPP +L F++ + + I A +L +
Sbjct: 137 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATAQKRIDTAIPEGAAALKSIL 190
>gi|50121111|ref|YP_050278.1| peptidyl-tRNA hydrolase [Pectobacterium atrosepticum SCRI1043]
gi|68052943|sp|Q6D557|PTH_ERWCT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|49611637|emb|CAG75086.1| peptidyl-tRNA hydrolase [Pectobacterium atrosepticum SCRI1043]
Length = 195
Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +DR+ + + KF S L G L+
Sbjct: 5 KLIVGLANPGAEYAATRHNAGAWFVDRLAESYRQSLKEESKFFGYTSRLNLAGQDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ + LV HD+LDL G +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVAAMATFYRI-QPDEILVAHDELDLLPGIAKLKLGGGHGGHNGLKDIIS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + + VLG E+ + ID R +L K + +
Sbjct: 124 KLGNNPNFHRLRIGIGHPGDKSKVTGFVLGKPPMSEQTLIDEAIDEAVRCTEILMKEDMI 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 KAMNRLHAFK 193
>gi|271500551|ref|YP_003333576.1| peptidyl-tRNA hydrolase [Dickeya dadantii Ech586]
gi|270344106|gb|ACZ76871.1| peptidyl-tRNA hydrolase [Dickeya dadantii Ech586]
Length = 195
Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats.
Identities = 72/190 (37%), Positives = 100/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +DR+ + P + KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAATRHNAGAWYVDRLADAYRQPLKEESKFFGYTARLSLAGNDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ + LV HD+LDL G +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVAAMATFYRI-QPDEILVAHDELDLPPGVAKLKLGGGHGGHNGLKDIVS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID R +L K + V
Sbjct: 124 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQTLIDQAIDESLRCTDILMKEDMV 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 KAMNRLHAFK 193
>gi|260914450|ref|ZP_05920919.1| aminoacyl-tRNA hydrolase [Pasteurella dagmatis ATCC 43325]
gi|260631551|gb|EEX49733.1| aminoacyl-tRNA hydrolase [Pasteurella dagmatis ATCC 43325]
Length = 194
Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 100/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G IDR+ F + KF + + ++G +
Sbjct: 5 KLIVGLGNPGDKYADTRHNAGEWLIDRLARQFNFTLNPENKFFGKTARVVINGNEVRFLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LVIHD+LDL G ++K GGG GHNGL+
Sbjct: 65 PTTFMNLSGKAISALANFYRIKP-EEILVIHDELDLPPGVAKIKQGGGYGGHNGLRDTIA 123
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ KN+ RLR+GIG P D + +VL S + + +D + + +L K
Sbjct: 124 QLANNKNFYRLRVGIGHPGDKNLVAAYVLNKPSPADWQLIDKALDEASTCVEILIKEGIT 183
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 184 KATNRLNAFK 193
>gi|227485005|ref|ZP_03915321.1| aminoacyl-tRNA hydrolase [Anaerococcus lactolyticus ATCC 51172]
gi|227237002|gb|EEI87017.1| aminoacyl-tRNA hydrolase [Anaerococcus lactolyticus ATCC 51172]
Length = 195
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 114/189 (60%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+ + GLGNPG +Y RHN+GFM ID + + + K KF + +G++ G + +LIK
Sbjct: 1 MYYIVGLGNPGLQYENTRHNVGFMTIDYLANKYNIDVRKLKFKSLYGQGEISGHKVMLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ E+ NFYK +++ +VI+DD+D+DFGT+R++ G HNG+KSI
Sbjct: 61 PQTYMNNSGEAVRELRNFYKF-DIDKLIVIYDDIDIDFGTVRIRKKGSAGSHNGMKSIIY 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + + R+++ IG+ P+ + VL FS E L I A+ + ++ K +
Sbjct: 120 QIQDDKFPRIKVSIGKKPEKWDLANFVLSGFSKDEVSILEDEIRLAAKGIEIILKEDIDM 179
Query: 180 FLNHIVSVR 188
+N SV+
Sbjct: 180 AMNKCNSVK 188
>gi|293115400|ref|ZP_05791311.2| aminoacyl-tRNA hydrolase [Butyrivibrio crossotus DSM 2876]
gi|292810128|gb|EFF69333.1| aminoacyl-tRNA hydrolase [Butyrivibrio crossotus DSM 2876]
Length = 198
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 2/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNP +Y RHN+GF ID + ++K I +G + G + IL+K
Sbjct: 12 MYVIAGLGNPEKKYEMTRHNMGFRIIDALAGRFNISMTEQKHKGLIGKGIIGGNKVILVK 71
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+ + V ++YK+ E V DD+ L+ G +R++ G GHNG+KSI
Sbjct: 72 PLTYMNLSGECIRPVCDYYKVDPSECI-VAFDDISLEPGKIRIRKKGSAGGHNGIKSIIS 130
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + RL+ G+G P + +VLG F+S + + ++ ++ + +
Sbjct: 131 CLGTDAFPRLKFGVGDKPKQMDLADYVLGRFNSEDEAIVAKELEKACNAIECMVTEGYDA 190
Query: 180 FLNHIVSV 187
+N V
Sbjct: 191 AMNKYNGV 198
>gi|213156612|ref|YP_002318273.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AB0057]
gi|226723244|sp|B7I7B5|PTH_ACIB5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|213055772|gb|ACJ40674.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii AB0057]
Length = 193
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 2/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++++ + KFH G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITIKNDPKFHGISGRGNIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS++ FY++ E L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 MTYMNRSGQSVVPFSKFYQIAP-EAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG S E+ + ID+ + LL + + +
Sbjct: 125 IGPNFHRLRIGIGHPGSKERVSGHVLGKAPSSEQSLMDGAIDHALSKVKLLVQGQVPQAM 184
Query: 182 NHIVSVR 188
N I + +
Sbjct: 185 NQINAYK 191
>gi|168050723|ref|XP_001777807.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670783|gb|EDQ57345.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 255
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG ++ RHNIGF ID I P + + + +G + +L KP
Sbjct: 57 WLIVGLGNPGSKFVGTRHNIGFELIDAIAEAENIPLRTIQQRSLLGKGFIGPTPVLLAKP 116
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ + +YK+P E L I+DDL+L+F LR+ GG GHNG++S+ E
Sbjct: 117 HTYMNLSGESVGPISTYYKIPR-ERVLAIYDDLELEFAMLRILPRGGHGGHNGMRSLIEH 175
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ RLR G+GRP +VL F+ ER L ++ + LL
Sbjct: 176 FGGKQDFPRLRFGVGRPECNMDPSAYVLQKFNPRERKELDEVLQRGVEGVRLLMTEGLQK 235
Query: 180 FLNHIVSVRK 189
+ RK
Sbjct: 236 TVTTWNLHRK 245
>gi|293388110|ref|ZP_06632637.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis S613]
gi|291082486|gb|EFE19449.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis S613]
Length = 188
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 102/187 (54%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y E +HNIGF+ +D I F A+I+E + + +L+K
Sbjct: 1 MKVIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++ ++ + E+ +VI+DDLDL+ G +RL+ G GHNG+KS+
Sbjct: 61 PLTFMNESGRSVGPLLTYFG-ADEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G N + R++IGIGRP +I HVL F +L + A + + V
Sbjct: 120 HLGTNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEILLAVKKAADAALYACEGHTFV 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 ETMNQFN 186
>gi|307705911|ref|ZP_07642749.1| peptidyl-tRNA hydrolase [Streptococcus mitis SK597]
gi|307620572|gb|EFN99670.1| peptidyl-tRNA hydrolase [Streptococcus mitis SK597]
Length = 189
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+T G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRTKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + R++IGIGRP + ++ HVL F + +L ID + S+ L ++
Sbjct: 122 HIGTQVFNRVKIGIGRPKNGMSVVNHVLSKFDKDDYIGILQSIDKVDDSVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|309777977|ref|ZP_07672919.1| aminoacyl-tRNA hydrolase [Erysipelotrichaceae bacterium 3_1_53]
gi|308914266|gb|EFP60064.1| aminoacyl-tRNA hydrolase [Erysipelotrichaceae bacterium 3_1_53]
Length = 186
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 98/186 (52%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF +D I +KKF A I+ ++ +L+K
Sbjct: 1 MKLIVGLGNPGKEYEMTRHNSGFCVLDAIAEECRVDIAQKKFKALIANTRIGSESVLLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+++ M+FYKL + EN LVI+DDLDL G +RL+ G G NG+K+I
Sbjct: 61 PQTFMNLSGEAVRAAMDFYKL-SAENLLVIYDDLDLPVGKIRLRAQGSAGGQNGMKNIIR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GIG+ +I VLG E ++ + +
Sbjct: 120 HIGTQEFDRIRVGIGKDA-RIPVIDWVLGKIRKEELEDYKSAVELARDAAIYSCSHSFMD 178
Query: 180 FLNHIV 185
++
Sbjct: 179 TMSQFN 184
>gi|117929151|ref|YP_873702.1| peptidyl-tRNA hydrolase [Acidothermus cellulolyticus 11B]
gi|117649614|gb|ABK53716.1| peptidyl-tRNA hydrolase [Acidothermus cellulolyticus 11B]
Length = 196
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 109/185 (58%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG Y +NRHN+GFM +D + + +++ G+L G +L KP
Sbjct: 6 WLVVGLGNPGPAYAKNRHNVGFMVVDLLAERAGMRFTVHRTRTQLANGRLAGQPAMLAKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
++MN SG + +++++++P E +V+HD+LDL FG LR+K GGGDAGHNGL+SI+
Sbjct: 66 LSYMNQSGGPVAGLLHYFRIPR-ERLIVVHDELDLPFGVLRVKRGGGDAGHNGLRSITAA 124
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R+R GIGRPP +VL +FS+ ER L ++ A + L +
Sbjct: 125 LRGADYLRVRFGIGRPPPHLDPAEYVLRDFSAAERAELGVHLEEAADVVESLLSVGLAAT 184
Query: 181 LNHIV 185
N +
Sbjct: 185 QNAVH 189
>gi|170718048|ref|YP_001785087.1| peptidyl-tRNA hydrolase [Haemophilus somnus 2336]
gi|189038153|sp|B0UVY6|PTH_HAES2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|168826177|gb|ACA31548.1| Aminoacyl-tRNA hydrolase [Haemophilus somnus 2336]
Length = 194
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ F + + KF + + + G +
Sbjct: 5 KLIVGLGNPGDKYADTRHNAGEWLIERLARRFNFNLSVESKFSGKTARAVISGQEMRFLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++P E LV+HD+LDL G +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVSALANFYRIPP-EQILVLHDELDLPPGIAKLKQGGGHGGHNGLKDIIA 123
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ KN+ RLRIGIG P D + +VL S + + +D + +L K
Sbjct: 124 QLANNKNFYRLRIGIGHPGDKNLVASYVLNKPSPTDWQLIDRTLDEATDCIEILMKEGIT 183
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 184 KATNRLNAFK 193
>gi|259501957|ref|ZP_05744859.1| aminoacyl-tRNA hydrolase [Lactobacillus antri DSM 16041]
gi|259170134|gb|EEW54629.1| aminoacyl-tRNA hydrolase [Lactobacillus antri DSM 16041]
Length = 208
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 69/188 (36%), Positives = 109/188 (57%), Gaps = 5/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM +D++ + A+ K A + G ++G + +L+
Sbjct: 23 MKMIVGLGNIGSRYDETRHNTGFMVVDQLARDYQLGAFSHLKQEAVAASGVINGEKVMLV 82
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ ++++Y+L +L + ++++DDLD+ G +RLKT G GHNGLKSI
Sbjct: 83 KPTTFMNDSGRAVGPLVDYYQL-DLADLVIVNDDLDMPVGRVRLKTHGASGGHNGLKSII 141
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED- 177
G KN+ R+++GI P ++ HVLG F+ ER ++ +L K ED
Sbjct: 142 NALGTKNFNRVKLGIDHPQH-GTVVSHVLGKFTPAERPQFDDAVEEAEHALEDWIKGEDF 200
Query: 178 VSFLNHIV 185
+N
Sbjct: 201 AQLMNDYN 208
>gi|331701923|ref|YP_004398882.1| peptidyl-tRNA hydrolase [Lactobacillus buchneri NRRL B-30929]
gi|329129266|gb|AEB73819.1| Peptidyl-tRNA hydrolase [Lactobacillus buchneri NRRL B-30929]
Length = 186
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 99/176 (56%), Gaps = 2/176 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN GFM +++ H +K +A+ G ++ + ++++
Sbjct: 1 MKMIVGLGNIGPQYDGTRHNTGFMVVEQFAKSHDISIKTRKMNAKYGSGFVNNTKVMVVE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +M+++ + ++E+ +++HDD+DL G +R+K G GHNG+KSI
Sbjct: 61 PTTFMNDSGLAVRPLMDYFDV-SIEDLIIVHDDMDLPVGKIRIKDKGSAGGHNGIKSIIA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G +N+ R+R+GI P ++ +VLG FS + D+ +L
Sbjct: 120 SVGTQNFDRIRVGIDHPDHGNTVVNYVLGRFSKDQAPMFKQAADHAVNALDDWIDG 175
>gi|227520042|ref|ZP_03950091.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0104]
gi|229550503|ref|ZP_04439228.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 29200]
gi|256618333|ref|ZP_05475179.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 4200]
gi|256762051|ref|ZP_05502631.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T3]
gi|256956815|ref|ZP_05560986.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DS5]
gi|256964179|ref|ZP_05568350.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HIP11704]
gi|257078485|ref|ZP_05572846.1| peptidyl-tRNA hydrolase [Enterococcus faecalis JH1]
gi|257081544|ref|ZP_05575905.1| peptidyl-tRNA hydrolase [Enterococcus faecalis E1Sol]
gi|257084192|ref|ZP_05578553.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Fly1]
gi|257088019|ref|ZP_05582380.1| peptidyl-tRNA hydrolase [Enterococcus faecalis D6]
gi|257088696|ref|ZP_05583057.1| peptidyl-tRNA hydrolase [Enterococcus faecalis CH188]
gi|257417622|ref|ZP_05594616.1| peptidyl-tRNA hydrolase [Enterococcus faecalis AR01/DG]
gi|294779318|ref|ZP_06744721.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis PC1.1]
gi|300862116|ref|ZP_07108196.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TUSoD Ef11]
gi|307268509|ref|ZP_07549884.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4248]
gi|307274220|ref|ZP_07555428.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0855]
gi|307276445|ref|ZP_07557568.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2134]
gi|307286965|ref|ZP_07567040.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0109]
gi|312901072|ref|ZP_07760361.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0470]
gi|312904635|ref|ZP_07763790.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0635]
gi|227072590|gb|EEI10553.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0104]
gi|229304360|gb|EEN70356.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 29200]
gi|256597860|gb|EEU17036.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ATCC 4200]
gi|256683302|gb|EEU22997.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T3]
gi|256947311|gb|EEU63943.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DS5]
gi|256954675|gb|EEU71307.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HIP11704]
gi|256986515|gb|EEU73817.1| peptidyl-tRNA hydrolase [Enterococcus faecalis JH1]
gi|256989574|gb|EEU76876.1| peptidyl-tRNA hydrolase [Enterococcus faecalis E1Sol]
gi|256992222|gb|EEU79524.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Fly1]
gi|256996049|gb|EEU83351.1| peptidyl-tRNA hydrolase [Enterococcus faecalis D6]
gi|256997508|gb|EEU84028.1| peptidyl-tRNA hydrolase [Enterococcus faecalis CH188]
gi|257159450|gb|EEU89410.1| peptidyl-tRNA hydrolase [Enterococcus faecalis ARO1/DG]
gi|294453604|gb|EFG22003.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis PC1.1]
gi|295112542|emb|CBL31179.1| peptidyl-tRNA hydrolase [Enterococcus sp. 7L76]
gi|300848641|gb|EFK76398.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TUSoD Ef11]
gi|306501911|gb|EFM71200.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0109]
gi|306506925|gb|EFM76072.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2134]
gi|306509182|gb|EFM78244.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0855]
gi|306515170|gb|EFM83710.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4248]
gi|310631987|gb|EFQ15270.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0635]
gi|311291818|gb|EFQ70374.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0470]
gi|315026786|gb|EFT38718.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2137]
gi|315032976|gb|EFT44908.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0017]
gi|315036611|gb|EFT48543.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0027]
gi|315145386|gb|EFT89402.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX2141]
gi|315151126|gb|EFT95142.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0012]
gi|315160776|gb|EFU04793.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0645]
gi|315165852|gb|EFU09869.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1302]
gi|315171411|gb|EFU15428.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1342]
gi|315579375|gb|EFU91566.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0630]
gi|327534053|gb|AEA92887.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis OG1RF]
gi|329577442|gb|EGG58891.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis TX1467]
Length = 188
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y E +HNIGF+ +D I F A+I+E + + +L+K
Sbjct: 1 MKVIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++ ++ + + E+ +VI+DDLDL+ G +RL+ G GHNG+KS+
Sbjct: 61 PLTFMNESGRSVGPLLTYFGV-DEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G N + R++IGIGRP +I HVL F +L + A + + V
Sbjct: 120 HLGTNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADAALYACEGHTFV 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 ETMNQFN 186
>gi|323140869|ref|ZP_08075782.1| aminoacyl-tRNA hydrolase [Phascolarctobacterium sp. YIT 12067]
gi|322414607|gb|EFY05413.1| aminoacyl-tRNA hydrolase [Phascolarctobacterium sp. YIT 12067]
Length = 198
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 100/185 (54%), Gaps = 5/185 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY RHNIGFM +D + K+ A ++E + + I+IK
Sbjct: 1 MKLIVGLGNIGREYENTRHNIGFMVVDELARRLGVSFGKEDRSAYMAEYRAP-EKIIIIK 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG ++ NFY + + ++ VI DD+D+ G LR++ G GHNG+KSI+E
Sbjct: 60 PTTYMNLSGVAVGAYANFYHI-DPDDIAVIQDDMDMPVGQLRIRRKGSAGGHNGIKSITE 118
Query: 121 KCGKN-YKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-RED 177
G + Y R +IGIG P + ++ HVL F ++ + + +A +L K +
Sbjct: 119 HLGTDAYPRFKIGIGHPARNNKAVVNHVLHAFQGEDKTAIEAAVAEMATALEEWIKSGDI 178
Query: 178 VSFLN 182
+
Sbjct: 179 EEVMQ 183
>gi|307131087|ref|YP_003883103.1| peptidyl-tRNA hydrolase [Dickeya dadantii 3937]
gi|306528616|gb|ADM98546.1| peptidyl-tRNA hydrolase [Dickeya dadantii 3937]
Length = 195
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G IDR+ + P + KF + + G L+
Sbjct: 5 KLIVGLANPGAEYATTRHNAGAWYIDRLAEAYRQPLKEESKFFGYTARLSMAGNDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ + LV HD+LDL G +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVAAMATFYRI-QPDEILVAHDELDLPPGVAKLKLGGGHGGHNGLKDIVS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG + E+ + ID R +L K + +
Sbjct: 124 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPASEQTLIDQAIDESLRCTDILMKEDMI 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 KAMNRLHAFK 193
>gi|294784050|ref|ZP_06749372.1| aminoacyl-tRNA hydrolase [Fusobacterium sp. 1_1_41FAA]
gi|294479862|gb|EFG27641.1| aminoacyl-tRNA hydrolase [Fusobacterium sp. 1_1_41FAA]
Length = 191
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 71/174 (40%), Positives = 107/174 (61%), Gaps = 2/174 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHNIGF+ +D + ++KF A ISE +DG + I K
Sbjct: 1 MKVVIGLGNPGKKYEKTRHNIGFIVVDSLRKKFNLTDEREKFQALISEKNIDGEKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG +L+E++NFYKL ++ +V++DD+ LDFG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNALIEIVNFYKLDPKKDIIVVYDDMSLDFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G+ + R++ GIG + HVLG FS E+ L+ ++ + + +
Sbjct: 121 HIGEEFIRIKCGIG--AKKEDAVEHVLGEFSQSEQKELVEFLEKLNECIIDILT 172
>gi|222528652|ref|YP_002572534.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor bescii DSM 6725]
gi|254783849|sp|B9MPK0|PTH_ANATD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|222455499|gb|ACM59761.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor bescii DSM 6725]
Length = 189
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 106/185 (57%), Gaps = 4/185 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+ GLGNPG Y RHN GF+ ID + F K KF + + G + +L+KP
Sbjct: 3 YIITGLGNPGERYTFTRHNAGFLAIDYLAQFFNTKVDKIKFKGLVGSFEYAGKKVLLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S++E +NFYK+ E +VI+DD+ D G ++++ G D GHNG+KSI +
Sbjct: 63 MTYMNASGESIIEAVNFYKIKP-EKLIVIYDDIAFDVGVVKMRKKGSDGGHNGIKSIIQC 121
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + R+RIGIG P ++++VL F E+ + I+ + + +L + +
Sbjct: 122 LGTEEFPRIRIGIGVP--KYDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDRA 179
Query: 181 LNHIV 185
+N+I
Sbjct: 180 MNYIN 184
>gi|260890956|ref|ZP_05902219.1| aminoacyl-tRNA hydrolase [Leptotrichia hofstadii F0254]
gi|260859509|gb|EEX74009.1| aminoacyl-tRNA hydrolase [Leptotrichia hofstadii F0254]
Length = 188
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 63/188 (33%), Positives = 99/188 (52%), Gaps = 3/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF+ +D + ++KF + + G + K
Sbjct: 1 MKLIVGLGNPGEQYKLTRHNIGFIFVDEYLKENNITDIREKFKSLFVQTNHKGDKVFYQK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ E + F+KL + VI+DD+D+ FG L++K G GHNG+KSI
Sbjct: 61 PMTFMNLSGEAVGEAVRFFKLDPETDLFVIYDDMDMPFGKLKIKQNGSAGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED--V 178
G + R++ GIG+P + VLG FS E+ + + I + + K +
Sbjct: 121 HVGNEFARIKFGIGKPETKEETLGFVLGKFSPEEKEIVKNSREKIFNLIDDI-KDDMTIS 179
Query: 179 SFLNHIVS 186
+N +
Sbjct: 180 RLMNKYNT 187
>gi|94986155|ref|YP_605519.1| peptidyl-tRNA hydrolase [Deinococcus geothermalis DSM 11300]
gi|119390934|sp|Q1IWN4|PTH_DEIGD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|94556436|gb|ABF46350.1| Aminoacyl-tRNA hydrolase [Deinococcus geothermalis DSM 11300]
Length = 214
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD---GLRTI 57
M +V GLGNPG +Y + RHN+G++ +D + W AE++E ++ G + +
Sbjct: 1 MKLVVGLGNPGSQYAQTRHNVGWLVVDEVARRWGA-VWHPDKDAEVAELRMGAAPGEKVL 59
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+KPQTFMN SG+++ + FYKL LV+ DDLD FG L+ + GG G NG++
Sbjct: 60 LVKPQTFMNSSGRAVGPLFAFYKLEPAA-LLVVQDDLDSPFGLLKFRLGGRHGGQNGVRD 118
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
I G +++ RL+IGI RPP + VL + + E L ++ A ++ +
Sbjct: 119 IIRVLGTQDFARLKIGISRPPAGWNPADWVLSRWRAEEAETLAELVRLGADAVEVWVSHG 178
Query: 177 DVSFLNHIV 185
Sbjct: 179 LAEGQARFN 187
>gi|302871261|ref|YP_003839897.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor obsidiansis OB47]
gi|302574120|gb|ADL41911.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor obsidiansis OB47]
Length = 207
Score = 226 bits (578), Expect = 8e-58, Method: Composition-based stats.
Identities = 67/185 (36%), Positives = 109/185 (58%), Gaps = 4/185 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+AGLGNPG Y RHN+GF+ ID + F K KF + + G + +L+KP
Sbjct: 21 YIIAGLGNPGDRYTFTRHNVGFLTIDYLAQFFNTKVDKIKFKGLVGSFEYAGKKVLLLKP 80
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S++E +NFYK+ E +VI+DD+ D G ++++ G D GHNG+KSI ++
Sbjct: 81 MTYMNASGESIIEAVNFYKIKP-EKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQR 139
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + R+RIGIG P ++++VL F E+ + I+ + + +L + +
Sbjct: 140 LGTEEFPRIRIGIGVP--KYDMVKYVLSEFEDGEKEKIFRAIEKASNGIKILLESDIDRA 197
Query: 181 LNHIV 185
+N+I
Sbjct: 198 MNYIN 202
>gi|158338610|ref|YP_001519787.1| peptidyl-tRNA hydrolase [Acaryochloris marina MBIC11017]
gi|158308851|gb|ABW30468.1| peptidyl-tRNA hydrolase [Acaryochloris marina MBIC11017]
Length = 206
Score = 226 bits (578), Expect = 8e-58, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 98/184 (53%), Gaps = 6/184 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLD-GLRTILIK 60
++ GLGNPG +Y RHNIGF IDR+ +++F E EG G R L+K
Sbjct: 10 LIVGLGNPGSKYDRTRHNIGFAFIDRLAQHWQISLTSERRFQGEYGEGLGGQGRRVRLLK 69
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQS+ V++++KL LVI+D++ L G LRL+ G GHNG++SI
Sbjct: 70 PHTYMNNSGQSIRAVIDWFKLEPTS-VLVIYDEMALPVGKLRLRLKGSAGGHNGMRSIIS 128
Query: 121 KCGK-NYKRLRIGIGRPPD--TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G RLRIGIG PP I VLG F+ E L ++D ++ + K+
Sbjct: 129 HLGTPEVPRLRIGIGSPPPERGKDTISFVLGRFAPLENQLLPAVLDLGVDAVEMALKKGI 188
Query: 178 VSFL 181
+
Sbjct: 189 EQSM 192
>gi|330718521|ref|ZP_08313121.1| peptidyl-tRNA hydrolase [Leuconostoc fallax KCTC 3537]
Length = 188
Score = 226 bits (578), Expect = 8e-58, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 3/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G +Y RHNIGFM ID + + K A ++ +DG+ +L+K
Sbjct: 1 MKYIFGLGNIGKKYENTRHNIGFMAIDALAEKYNATFLPSKQFAYTAKINIDGVAVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ ++++Y N+E+ LV+ DD+D+ FG LR + G GHNGLKSI
Sbjct: 61 PTTYMNESGQAVRAILDYYN-GNIEDVLVLVDDMDMPFGKLRFRDKGSAGGHNGLKSIMS 119
Query: 121 KCG-KNYKRLRIGIGRPPD-TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N+ RL+ G+G P +I +VLG FS E+ + + D ++ ++
Sbjct: 120 HIGSSNFLRLKFGVGHPNHEKQAVINYVLGQFSQQEQITVNEMFDRSTSAMESWLHGANI 179
Query: 179 SFLNH 183
L++
Sbjct: 180 ETLSN 184
>gi|295106616|emb|CBL04159.1| peptidyl-tRNA hydrolase [Gordonibacter pamelaeae 7-10-1-b]
Length = 185
Score = 226 bits (578), Expect = 8e-58, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG EY RHN GF +D I WK + + ++G + +L K
Sbjct: 1 MYLIVGLGNPGEEYAHTRHNAGFDAVDAIAGEVGARYWKTECGSLTAKGAYRDVDLVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ++MN SG + ++MN Y + + E+ +VIHD+LD+D GT+R+K GGG AGHNGL+SI +
Sbjct: 61 PQSYMNTSGGPVKQLMNAYGV-DAEHLIVIHDELDIDPGTVRVKFGGGHAGHNGLRSICD 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K G +++ R+R+GIGRPP ++ VL +D A++ L
Sbjct: 120 KLGTRDWSRVRVGIGRPPGRMPVVDWVLSLPKKEAADDFAYAVDRGAQAALSLVTAGLEK 179
Query: 180 FLNHIV 185
Sbjct: 180 TQQAYN 185
>gi|317491746|ref|ZP_07950181.1| peptidyl-tRNA hydrolase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920180|gb|EFV41504.1| peptidyl-tRNA hydrolase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 196
Score = 226 bits (578), Expect = 8e-58, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + + + KF+ + L G L+
Sbjct: 4 KLIVGLANPGAEYAQTRHNAGAWFVDALAERNGQSLKEESKFYGYTARLNLAGNDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ + LV HD+LDL G +LK GGG+ GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAALATFYRI-QPDEILVAHDELDLPPGVAKLKLGGGNGGHNGLKDIQS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG + E+ + ID R +L K
Sbjct: 123 KLGNNPNFYRLRIGIGHPGDKNKVVGFVLGKPLASEQPLIDDAIDEALRCTEVLLKEGID 182
Query: 179 SFLNHIVSVR 188
+ + +
Sbjct: 183 RAMARMNGFK 192
>gi|257792490|ref|YP_003183096.1| peptidyl-tRNA hydrolase [Eggerthella lenta DSM 2243]
gi|257476387|gb|ACV56707.1| peptidyl-tRNA hydrolase [Eggerthella lenta DSM 2243]
Length = 185
Score = 226 bits (578), Expect = 8e-58, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 105/186 (56%), Gaps = 5/186 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG EY RHN GF +D I WK + A ++G +L K
Sbjct: 1 MFLIVGLGNPGEEYEHTRHNAGFDAVDLIAEEVGARYWKTECGALTAKGAYRDHDLVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ++MN SG + ++MN Y + + E+ +V+HD+LD+D GT+R+K GGG AGHNGL++I +
Sbjct: 61 PQSYMNTSGGPVKQLMNAYGV-DAEHLIVVHDELDIDPGTVRVKFGGGHAGHNGLRAICD 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK---RE 176
K G +++ R+R+GIGRPP ++ VL + D A++ L + +
Sbjct: 120 KLGTRDWHRVRVGIGRPPGRMPVVDWVLSKPKKDAADDFVQATDRGAQAALSLVQVGLEK 179
Query: 177 DVSFLN 182
N
Sbjct: 180 TQQAFN 185
>gi|297616312|ref|YP_003701471.1| peptidyl-tRNA hydrolase [Syntrophothermus lipocalidus DSM 12680]
gi|297144149|gb|ADI00906.1| peptidyl-tRNA hydrolase [Syntrophothermus lipocalidus DSM 12680]
Length = 191
Score = 226 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 102/186 (54%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY RHN+GFM ++ + H + K + ++ + G ++ K
Sbjct: 1 MKLVVGLGNPGKEYQGTRHNLGFMVVEELVRRHGVKRQEYKHSSVMAWLECHGEEVVVAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ +++ KL NLE+ LVI DDLDL+ G +R++ GG GH GL S+
Sbjct: 61 PLTYMNRSGQAVKPLVSALKL-NLEDVLVICDDLDLETGRIRIRPRGGSGGHRGLASVIS 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLR+GIGRPP +I +VL F++ E + I A ++ +
Sbjct: 120 SLGTEEFARLRVGIGRPPTGEDVIDYVLDGFTASETETMARAIARAADAVETWIGQGIEK 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNTYN 185
>gi|322392421|ref|ZP_08065881.1| aminoacyl-tRNA hydrolase [Streptococcus peroris ATCC 700780]
gi|321144413|gb|EFX39814.1| aminoacyl-tRNA hydrolase [Streptococcus peroris ATCC 700780]
Length = 189
Score = 226 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 108/187 (57%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F AE++ L+G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVSFTHDKIFQAELASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIEDLLIIYDDLDMEVGKIRLRVKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + R++IGIGRP ++ HVL F + +L ID + ++ L ++
Sbjct: 122 HIGTQVFNRVKIGIGRPKKGMSVVHHVLSKFDQEDYIDILQSIDKVDDAVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQKYN 188
>gi|209527283|ref|ZP_03275793.1| Aminoacyl-tRNA hydrolase [Arthrospira maxima CS-328]
gi|209492271|gb|EDZ92616.1| Aminoacyl-tRNA hydrolase [Arthrospira maxima CS-328]
Length = 201
Score = 226 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 67/192 (34%), Positives = 103/192 (53%), Gaps = 9/192 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGL-RTILIK 60
++ GLGNPG +Y RHNIGF +D + + ++F E ++ + L+K
Sbjct: 7 LIVGLGNPGSKYDRTRHNIGFEAVDFLADKWGATLSENRRFQGVFGEAKMRSHDKLYLLK 66
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ V+++YKLP E+ LVI+DD+DL G LRL+ G GHNG+KS
Sbjct: 67 PLTYMNRSGQAIRSVVDWYKLPP-ESVLVIYDDMDLPVGRLRLRLSGSAGGHNGMKSAIA 125
Query: 121 KCG-KNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G +N+ RLR+GI +P I HVLG F ER + ++ + ++ L +
Sbjct: 126 HLGTQNFPRLRLGIDKPQAAVLNHDRETISHVLGKFPPNERQTMDKLLQQVLEAIELALE 185
Query: 175 REDVSFLNHIVS 186
++ S
Sbjct: 186 DGVEKAMSLYNS 197
>gi|238919462|ref|YP_002932977.1| peptidyl-tRNA hydrolase, putative [Edwardsiella ictaluri 93-146]
gi|259535175|sp|C5B806|PTH_EDWI9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238869031|gb|ACR68742.1| peptidyl-tRNA hydrolase, putative [Edwardsiella ictaluri 93-146]
Length = 196
Score = 226 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 72/190 (37%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + L G L+
Sbjct: 4 KLIVGLANPGAEYAQTRHNAGAWFVDALAERHGQSLKEESKFFGYTARLSLAGHDLRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E LV HD+LDL G +LK GGG+ GHNGLK I
Sbjct: 64 PTTFMNLSGKAVSALAGFYRIAPDE-ILVAHDELDLPPGVAKLKLGGGNGGHNGLKDIQS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + ++ VLG + E+ + ID R LL +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKSKVVGFVLGKPLASEQPLIDDAIDEALRCTDLLMQDGMD 182
Query: 179 SFLNHIVSVR 188
+N + R
Sbjct: 183 KAMNRLNGFR 192
>gi|256960621|ref|ZP_05564792.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Merz96]
gi|293382708|ref|ZP_06628633.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis R712]
gi|312908604|ref|ZP_07767546.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 512]
gi|312909248|ref|ZP_07768105.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 516]
gi|256951117|gb|EEU67749.1| peptidyl-tRNA hydrolase [Enterococcus faecalis Merz96]
gi|291079868|gb|EFE17232.1| aminoacyl-tRNA hydrolase [Enterococcus faecalis R712]
gi|310625391|gb|EFQ08674.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 512]
gi|311290490|gb|EFQ69046.1| peptidyl-tRNA hydrolase [Enterococcus faecalis DAPTO 516]
Length = 188
Score = 226 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 102/187 (54%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y E +HNIGF+ +D I F A+I+E + + +L+K
Sbjct: 1 MKVIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++ ++ + E+ +VI+DDLDL+ G +RL+ G GHNG+KS+
Sbjct: 61 PLTFMNESGRSVGPLLTYFG-ADEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G N + R++IGIGRP +I HVL F +L + A + + V
Sbjct: 120 HLGTNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADAALYACEGHTFV 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 ETMNQFN 186
>gi|194364506|ref|YP_002027116.1| peptidyl-tRNA hydrolase [Stenotrophomonas maltophilia R551-3]
gi|238693442|sp|B4SKT5|PTH_STRM5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|194347310|gb|ACF50433.1| Aminoacyl-tRNA hydrolase [Stenotrophomonas maltophilia R551-3]
Length = 192
Score = 226 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 62/188 (32%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN GF ++ + K E ++ ++ G L+KP
Sbjct: 6 LIVGLGNPGSEHARTRHNAGFHFVEALAEKAGARWNVDSKLFGETAKVEIAGQTVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ F+K+ E L HD+LDL G RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSVTAAQRFWKIEPEETLL-AHDELDLAPGVARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG S + + ID+ LPL + +
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVGWVLGRPSKDDEVLISRAIDDAIDVLPLAVQGDFSEA 184
Query: 181 LNHIVSVR 188
+ + + +
Sbjct: 185 MKRLHTPK 192
>gi|326501542|dbj|BAK02560.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 257
Score = 226 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 66/180 (36%), Positives = 99/180 (55%), Gaps = 3/180 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN+GF ID I K+F + + +G + + +L KP
Sbjct: 57 WLFVGLGNPGRMYKGTRHNVGFEMIDAIAEAEGISVSTKQFKSMVGKGLIGDVPVMLAKP 116
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+S+ ++++++K+P L ++I+DDLDL F LRL GG GHNG++S+
Sbjct: 117 QTFMNASGESVGQLVSYFKIP-LNQVVLIYDDLDLPFAKLRLLPKGGHGGHNGVRSVIHH 175
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ RLRIGIGRP I VL FS E+ L R++ ++
Sbjct: 176 LKQSRDFPRLRIGIGRPTGMMGAIGFVLRAFSKEEQEELDSTFLRGLRAVRIMLLEGFNK 235
>gi|197106325|ref|YP_002131702.1| peptidyl-tRNA hydrolase [Phenylobacterium zucineum HLK1]
gi|238690128|sp|B4R8Q8|PTH_PHEZH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|196479745|gb|ACG79273.1| peptidyl-tRNA hydrolase [Phenylobacterium zucineum HLK1]
Length = 209
Score = 226 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 74/191 (38%), Positives = 120/191 (62%), Gaps = 5/191 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGL----RT 56
M ++AGLGNPG Y +NRHNIGFM +D I FPA + +F + +EG +D RT
Sbjct: 1 MLLIAGLGNPGPTYAKNRHNIGFMAVDEIARRWGFPAARSRFRSLAAEGAIDTPQGPVRT 60
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+++KPQT+ N SG+++ E M F+KL + +V +D++DL G R+KTGGG AG+NG++
Sbjct: 61 LILKPQTYYNESGRAVGEAMKFFKL-QPSDVVVFYDEIDLAPGRFRMKTGGGAAGNNGIR 119
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
S++ + G +++R R+G G P + HVL +F E ++ P+++ A + PLLA +
Sbjct: 120 SVASQIGPDFRRARLGTGHPGQKELVHGHVLSDFHKAEMKWVEPLLEACADAAPLLALGD 179
Query: 177 DVSFLNHIVSV 187
D + ++ +
Sbjct: 180 DEKYQAEVMRL 190
>gi|262274713|ref|ZP_06052524.1| peptidyl-tRNA hydrolase [Grimontia hollisae CIP 101886]
gi|262221276|gb|EEY72590.1| peptidyl-tRNA hydrolase [Grimontia hollisae CIP 101886]
Length = 196
Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 63/189 (33%), Positives = 97/189 (51%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + KK+ + + G L+ P
Sbjct: 7 LLVGLANPGPEYAKTRHNAGAWVVEELARIHNVSLKEDKKYFGLTARISVGGEDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + NF+++ E +V HD+LDL G + K GGG GHNGL+ I K
Sbjct: 67 TTFMNLSGKSVSALANFFQIKP-EQIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDIISK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + RLR+GIG P + +VL + E + +D R + +L K +
Sbjct: 126 LGNNNEFYRLRVGIGHPGHKDKVAGYVLTKAPAHEHSQIEQAVDEAVRCIDILLKDDLAK 185
Query: 180 FLNHIVSVR 188
N + + +
Sbjct: 186 AQNRLHTFK 194
>gi|253700099|ref|YP_003021288.1| peptidyl-tRNA hydrolase [Geobacter sp. M21]
gi|259535194|sp|C6E501|PTH_GEOSM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|251774949|gb|ACT17530.1| peptidyl-tRNA hydrolase [Geobacter sp. M21]
Length = 188
Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 77/182 (42%), Positives = 112/182 (61%), Gaps = 3/182 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GFM +DR+ S +K F +G R L+KP
Sbjct: 4 KLIVGLGNPGPKYSWTRHNAGFMVLDRLASISGIQVTRKAFSGLSGDGNWAAERVYLLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ E + FYKL +L + +VIHDDLD+ FG ++LK GGG GHNGL+S++++
Sbjct: 64 QTFMNLSGRSVAEALRFYKL-SLSDLIVIHDDLDIPFGKVKLKEGGGHGGHNGLRSLAQE 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + Y R+R+GIGRP ++ VL NF+ E LL ++D +L ++ K
Sbjct: 123 LGSSAYARIRVGIGRPVH-GDVVNFVLANFAKEEMDSLLEVLDTSVDALEMMIKEGMPKA 181
Query: 181 LN 182
++
Sbjct: 182 MS 183
>gi|229513830|ref|ZP_04403292.1| peptidyl-tRNA hydrolase [Vibrio cholerae TMA 21]
gi|229522135|ref|ZP_04411552.1| peptidyl-tRNA hydrolase [Vibrio cholerae TM 11079-80]
gi|229524180|ref|ZP_04413585.1| peptidyl-tRNA hydrolase [Vibrio cholerae bv. albensis VL426]
gi|229337761|gb|EEO02778.1| peptidyl-tRNA hydrolase [Vibrio cholerae bv. albensis VL426]
gi|229341060|gb|EEO06065.1| peptidyl-tRNA hydrolase [Vibrio cholerae TM 11079-80]
gi|229349011|gb|EEO13968.1| peptidyl-tRNA hydrolase [Vibrio cholerae TMA 21]
gi|327484706|gb|AEA79113.1| Peptidyl-tRNA hydrolase [Vibrio cholerae LMA3894-4]
Length = 196
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + H + KF ++ ++
Sbjct: 6 KLLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLINSQELRVLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E +V HD+LDL G + K GGG GHNGLK
Sbjct: 66 PTTFMNLSGKAIAALANFYQIKP-EEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTIS 124
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P + +VLG + E+ L +D R L +L K
Sbjct: 125 KLGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEILLKDGLT 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|28897512|ref|NP_797117.1| peptidyl-tRNA hydrolase [Vibrio parahaemolyticus RIMD 2210633]
gi|31076864|sp|Q87RN9|PTH_VIBPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|28805724|dbj|BAC59001.1| peptidyl-tRNA hydrolase [Vibrio parahaemolyticus RIMD 2210633]
Length = 196
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + H + KF ++G L+
Sbjct: 6 KLLVGLANPGPEYAKTRHNAGAWVVEELARVHNVTLKNEPKFFGLTGRIMVNGQDLRLLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E +V HD+LDL G + K GGG GHNGL+
Sbjct: 66 PTTFMNLSGKAIAALAKFYQIKP-EEIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDTIS 124
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G K++ RLRIGIG P + VLG + E+ L D RSL +L K
Sbjct: 125 KLGNNKDFYRLRIGIGHPGHKDKVAGFVLGKAPAKEQELLDAAADEAVRSLDILIKDGLS 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|89094726|ref|ZP_01167661.1| peptidyl-tRNA hydrolase [Oceanospirillum sp. MED92]
gi|89080980|gb|EAR60217.1| peptidyl-tRNA hydrolase [Oceanospirillum sp. MED92]
Length = 198
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 74/188 (39%), Positives = 105/188 (55%), Gaps = 4/188 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G ++++ + H P +KK+H S Q+ G L+ P
Sbjct: 9 LIVGLGNPGDKYAQTRHNAGAEFVEQLAARHLAPLKPEKKYHGLYSRAQIGGQTIHLLVP 68
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSGQ++ + NFYK+P E LV HD+LDL G + K GGG GHNGL+ I K
Sbjct: 69 TTFMNLSGQAVAALANFYKIPPQE-ILVAHDELDLPPGIAKFKQGGGHGGHNGLRDIISK 127
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G KN+ RLR+GIG P ++ + VL + ER + +D R L L +
Sbjct: 128 LGNNKNFYRLRLGIGHPGHSSQVSGFVLKKAPNKERDATMAALDEAERYLELAISGDWGK 187
Query: 180 FLNHIVSV 187
+N + S
Sbjct: 188 AMNQLHSF 195
>gi|29374897|ref|NP_814050.1| peptidyl-tRNA hydrolase [Enterococcus faecalis V583]
gi|227555902|ref|ZP_03985949.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HH22]
gi|257418652|ref|ZP_05595646.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T11]
gi|46576784|sp|Q839C0|PTH_ENTFA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|29342355|gb|AAO80121.1| peptidyl-tRNA hydrolase [Enterococcus faecalis V583]
gi|227174959|gb|EEI55931.1| peptidyl-tRNA hydrolase [Enterococcus faecalis HH22]
gi|257160480|gb|EEU90440.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T11]
gi|315573563|gb|EFU85754.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0309B]
gi|315582089|gb|EFU94280.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0309A]
Length = 188
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y E +HNIGF+ +D I F A+I+E + + +L+K
Sbjct: 1 MKVIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++ ++ + + E+ +VI+DDLDL+ G +RL+ G GHNG+KS+
Sbjct: 61 PLTFMNESGRSVGPLLTYFGV-DEEDLIVIYDDLDLEIGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G N + R++IGIGRP +I HVL F +L + A + + V
Sbjct: 120 HLGTNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADAALYACEGHTFV 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 ETMNQFN 186
>gi|323496824|ref|ZP_08101861.1| peptidyl-tRNA hydrolase [Vibrio sinaloensis DSM 21326]
gi|323318083|gb|EGA71057.1| peptidyl-tRNA hydrolase [Vibrio sinaloensis DSM 21326]
Length = 196
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G ++ + H + KF ++G L+
Sbjct: 6 KLLVGLANPGPEYARTRHNAGAWVVEELARVHNITLKNEAKFFGLTGRIMMNGQDLRLLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + FY++ E +V HD+LDL G + K GGG GHNGL+
Sbjct: 66 PTTFMNLSGKSIAALAKFYQIKP-EEIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDTIS 124
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G K++ RLRIGIG P + VLG + E+ L D R L +L K
Sbjct: 125 KLGNCKDFYRLRIGIGHPGHKDKVAGFVLGKAPAKEQELLDAAADESVRCLDILIKDGLS 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|269961564|ref|ZP_06175926.1| Peptidyl-tRNA hydrolase [Vibrio harveyi 1DA3]
gi|269833605|gb|EEZ87702.1| Peptidyl-tRNA hydrolase [Vibrio harveyi 1DA3]
Length = 196
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + H + KF ++G L+
Sbjct: 6 KLLVGLANPGPEYAKTRHNAGAWVVEELARVHNVTLKNEPKFFGLTGRIMVNGQDLRLLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E +V HD+LDL G + K GGG GHNGL+
Sbjct: 66 PTTFMNLSGKAIAALAKFYQIKP-EEIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDTIS 124
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G K++ RLRIGIG P + VLG + E+ L D R L +L K
Sbjct: 125 KLGNNKDFYRLRIGIGHPGHKDKVAGFVLGKAPAKEQELLDAAADESVRCLDILIKDGLS 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|199598793|ref|ZP_03212205.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus HN001]
gi|199590298|gb|EDY98392.1| peptidyl-tRNA hydrolase [Lactobacillus rhamnosus HN001]
Length = 183
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 60/185 (32%), Positives = 98/185 (52%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y +HN+GFM +D + K +F A + ++D + L+KPQ
Sbjct: 1 MIVGLGNPGRQYAGTKHNMGFMVVDGLAQRMGLTLNKLEFDAATATTRVDDEKVFLVKPQ 60
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG+++ ++M +Y++ L+ LV+HDD+DL G LRL+ G GHNG+K I
Sbjct: 61 TYMNASGRAVRQLMMYYQI-RLDEILVVHDDMDLTLGKLRLRQRGSAGGHNGIKDIISAT 119
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDVSF 180
G + + RL+IGI P ++ VL F+ ++ + I +L
Sbjct: 120 GSDEFYRLKIGIQHP-QRQRVVDWVLTPFAKTDQPVIDAAITKADDALEDWLNGMPFAQL 178
Query: 181 LNHIV 185
+N
Sbjct: 179 MNKFN 183
>gi|91792179|ref|YP_561830.1| peptidyl-tRNA hydrolase [Shewanella denitrificans OS217]
gi|119391002|sp|Q12R19|PTH_SHEDO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|91714181|gb|ABE54107.1| peptidyl-tRNA hydrolase [Shewanella denitrificans OS217]
Length = 195
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G + + + + K++ + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVHELARVCNVTLVPESKYYGLAARATLHGRDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + NF+++ E LV HD+LD++ G + K GGG GHNGLK I
Sbjct: 65 PATFMNLSGKSVAALANFFRILP-EEILVAHDELDIEPGVAKFKLGGGHGGHNGLKDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G + + RLRIGIG P D + +VLG + E+ + ID R+ +L K++ V
Sbjct: 124 QMGNDKGFHRLRIGIGHPGDKNKVSGYVLGKAPASEQEKMDAAIDEAVRATEILFKQDMV 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|323492382|ref|ZP_08097535.1| peptidyl-tRNA hydrolase [Vibrio brasiliensis LMG 20546]
gi|323313429|gb|EGA66540.1| peptidyl-tRNA hydrolase [Vibrio brasiliensis LMG 20546]
Length = 196
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G ++ + H + KF ++G L+
Sbjct: 6 KLLVGLANPGPEYARTRHNAGAWVVEELARIHNVTLKNEAKFFGLSGRIMVNGQDLRLLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + FY++ E +V HD+LDL G + K GGG GHNGL+
Sbjct: 66 PTTFMNLSGKSIAALAKFYQIKP-EEIMVAHDELDLPPGVAKFKKGGGHGGHNGLRDTIS 124
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G K++ RLRIGIG P + +VLG + E+ L D R L +L K
Sbjct: 125 KLGNCKDFYRLRIGIGHPGHKDKVAGYVLGKAPAKEQELLDAAADESVRCLDILIKDGLS 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|320157144|ref|YP_004189523.1| peptidyl-tRNA hydrolase [Vibrio vulnificus MO6-24/O]
gi|326423676|ref|NP_759267.2| peptidyl-tRNA hydrolase [Vibrio vulnificus CMCP6]
gi|31340303|sp|Q8DFF4|PTH_VIBVU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|46576704|sp|Q7MMZ2|PTH_VIBVY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|319932456|gb|ADV87320.1| peptidyl-tRNA hydrolase [Vibrio vulnificus MO6-24/O]
gi|319999031|gb|AAO08794.2| peptidyl-tRNA hydrolase [Vibrio vulnificus CMCP6]
Length = 196
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + H + KF+ ++G L+
Sbjct: 6 KLLVGLANPGPEYAKTRHNAGAWVVEELARVHNITLKNEAKFYGLTGRIVMNGQELRLLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E +V HD+LDL G + K GGG GHNGL+
Sbjct: 66 PTTFMNLSGKAIAALAKFYQI-QPEEIMVAHDELDLPPGIAKFKKGGGHGGHNGLRDTIS 124
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P + VLG + E+ L +D R L +L K
Sbjct: 125 KLGNNKEFYRLRIGIGHPGHKDKVAGFVLGKAPASEQSLLDATVDESVRCLDILIKDGLS 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|288799716|ref|ZP_06405175.1| aminoacyl-tRNA hydrolase [Prevotella sp. oral taxon 299 str. F0039]
gi|288332964|gb|EFC71443.1| aminoacyl-tRNA hydrolase [Prevotella sp. oral taxon 299 str. F0039]
Length = 187
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 66/184 (35%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG+EY RHN GFM +D + K + ++E L G + L+KP
Sbjct: 4 YLIVGLGNPGYEYDNTRHNAGFMILDAFAKASNI-VFSDKRYGFVAETTLKGKKIFLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + + LVI DDL L G+LRLK G + GHNG I +
Sbjct: 63 TTFMNLSGNAVRYWLNQENIDQ-KRLLVIVDDLALPLGSLRLKASGSNGGHNGTGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G+ Y RLR GIG + VLG F+ E L P ID + +
Sbjct: 122 IGQQYARLRFGIGNDFSKGKQVDWVLGKFTDEELTTLQPQIDTAVEIIKSFVLAGVDITM 181
Query: 182 NHIV 185
N
Sbjct: 182 NQFN 185
>gi|256846562|ref|ZP_05552019.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 3_1_36A2]
gi|256718331|gb|EEU31887.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 3_1_36A2]
Length = 191
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 70/183 (38%), Positives = 109/183 (59%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHN+GF+ +D + ++KF A +SE +DG + I K
Sbjct: 1 MKVVIGLGNPGKKYERTRHNMGFIVVDSLRKKLNINDEREKFQALVSEKNIDGEKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG +++E++NFYKL ++ +VI+DD+DL FG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNAVIEIINFYKLDPKKDIIVIYDDMDLSFGDIRIRERGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS-LPLLAKREDVS 179
G+ + R++ GIG + HVLG F+ E+ L I++ + + +L +
Sbjct: 121 HIGEEFIRIKCGIG--TKEKDAVEHVLGEFNQTEQKDLDEILEIVDNCIIEMLTVQNLDR 178
Query: 180 FLN 182
+
Sbjct: 179 IMQ 181
>gi|260555726|ref|ZP_05827946.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii ATCC 19606]
gi|260410637|gb|EEX03935.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii ATCC 19606]
Length = 193
Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 2/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++++ + KFH G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS++ FY++ E L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 MTYMNRSGQSVVPFSKFYQIAP-EAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVLG S E+ + ID+ + LL + + +
Sbjct: 125 IGPNFHRLRIGIGHPGSKERVSGHVLGKAPSNEQSLMDGAIDHALSKVKLLVQGQVPQAM 184
Query: 182 NHIVSVR 188
N I + +
Sbjct: 185 NQINAYK 191
>gi|42518363|ref|NP_964293.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii NCC 533]
gi|68052979|sp|Q74LA8|PTH_LACJO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|41582648|gb|AAS08259.1| peptidyl-tRNA hydrolase [Lactobacillus johnsonii NCC 533]
Length = 185
Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM +D + K KF ++ +++G I ++
Sbjct: 1 MKLITGLGNPGRKYDQTKHNTGFMALDHYLEKNGLTLDKNKFEGLWTKQKINGEDVIFLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +V NF+K+ E+ LVIHDD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNDSGKSIAQVANFFKIKP-EDILVIHDDMDMPIGKIRIRANGKSGGHNGIKSIMA 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RL+IGI P + ++ VL F++ ++ + + + K ++
Sbjct: 120 CLGTNNFNRLKIGIRHPEN-ESVVSWVLSPFNNDQQKLMDAAFETSENVINDFIKGKNAQ 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNQYN 185
>gi|262170837|ref|ZP_06038515.1| peptidyl-tRNA hydrolase [Vibrio mimicus MB-451]
gi|261891913|gb|EEY37899.1| peptidyl-tRNA hydrolase [Vibrio mimicus MB-451]
Length = 196
Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + H + KF ++G ++
Sbjct: 6 KLLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLINGQELRVLV 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E +V HD+LDL G + K GGG GHNGLK
Sbjct: 66 PTTFMNLSGKAIAALANFYQIKP-EEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTIS 124
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P + +VLG + E+ L +D R L +L K
Sbjct: 125 KLGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEILMKDGLT 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|113476455|ref|YP_722516.1| peptidyl-tRNA hydrolase [Trichodesmium erythraeum IMS101]
gi|119391035|sp|Q110N1|PTH_TRIEI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110167503|gb|ABG52043.1| peptidyl-tRNA hydrolase [Trichodesmium erythraeum IMS101]
Length = 219
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 71/194 (36%), Positives = 106/194 (54%), Gaps = 10/194 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDG-LRTILI 59
++ GLGNP +Y + RHNIGF ID I + + +KF E EG+ + L+
Sbjct: 14 KLIVGLGNPEPKYDQTRHNIGFTGIDTIANIWQVSLSENRKFKGEFGEGRRPKAEKIYLL 73
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG+++ V+N+YKLP L+I+DD+DL G LRL+ G GHNG+KS
Sbjct: 74 KPLTYMNRSGEAISAVVNWYKLPP-SCVLIIYDDMDLPMGRLRLRLSGSAGGHNGMKSAI 132
Query: 120 EKCG-KNYKRLRIGIGRPP------DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + + RLRIGIG+P A I HVLG FS E + +++ + ++ L
Sbjct: 133 AHLGTQEFPRLRIGIGKPKNITAERGEAKTISHVLGKFSPKENKLMTQVLELVVDAVELS 192
Query: 173 AKREDVSFLNHIVS 186
K+ ++ +
Sbjct: 193 LKQGIEKAMSLYNN 206
>gi|154483283|ref|ZP_02025731.1| hypothetical protein EUBVEN_00984 [Eubacterium ventriosum ATCC
27560]
gi|149735793|gb|EDM51679.1| hypothetical protein EUBVEN_00984 [Eubacterium ventriosum ATCC
27560]
Length = 184
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 73/186 (39%), Positives = 108/186 (58%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+ V GLGNP EY + RHNIGF ID + S K+ A G + G + IL+K
Sbjct: 1 MYAVFGLGNPDKEYDKTRHNIGFDVIDELASQMGVEVKTKRHKALCGIGNIGGEKVILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ VM+FYKL + +VI DD++L G +R++ G GHNGLKSI
Sbjct: 61 PQTYMNLSGESVRAVMDFYKLDPENDIIVISDDINLATGRIRIRAQGSAGGHNGLKSIIN 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + +KR+R+G+G + +++ HVLG FS ER I + A ++ ++ + +
Sbjct: 121 HAGTQKFKRVRVGVG--ANEGNLVNHVLGKFSKGERVLAEQGIKDAASAVEVMILEDINT 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 AMNKFN 184
>gi|257057205|ref|YP_003135037.1| peptidyl-tRNA hydrolase [Saccharomonospora viridis DSM 43017]
gi|256587077|gb|ACU98210.1| peptidyl-tRNA hydrolase [Saccharomonospora viridis DSM 43017]
Length = 199
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 82/185 (44%), Positives = 111/185 (60%), Gaps = 2/185 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++AGLGNPG Y NRHNIGF+ +D + K AEI EG+L G R +L+KP+
Sbjct: 15 LLAGLGNPGPRYEGNRHNIGFLVLDELADRVGGRFKAHKSGAEICEGRLAGRRVVLVKPR 74
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
+FMNLSG + F+K+ E +VIHD+LDL +GT+RLK GGG GHNGL+SIS+
Sbjct: 75 SFMNLSGGPVASAARFFKIAP-EGIVVIHDELDLPYGTVRLKFGGGTGGHNGLRSISKSL 133
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G ++Y R+R GI RPP + +VL +FS+ ER L ID A ++ L +
Sbjct: 134 GTQDYYRVRFGIDRPPGRMNPADYVLRDFSTTERRELALNIDLCADAVETLISKGLAVAQ 193
Query: 182 NHIVS 186
N S
Sbjct: 194 NEFHS 198
>gi|332098233|gb|EGJ03206.1| peptidyl-tRNA hydrolase [Shigella dysenteriae 155-74]
Length = 190
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 96/189 (50%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G +D + P ++ KF S L G L+ P
Sbjct: 1 MIVGLANPGAEYAATRHNTGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K
Sbjct: 61 TTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISK 119
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 120 LGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLTK 179
Query: 180 FLNHIVSVR 188
N + + +
Sbjct: 180 ATNRLHAFK 188
>gi|88800289|ref|ZP_01115856.1| peptidyl-tRNA hydrolase [Reinekea sp. MED297]
gi|88777004|gb|EAR08212.1| peptidyl-tRNA hydrolase [Reinekea sp. MED297]
Length = 215
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN GF +D + H + K+ A+I+ QL G + L+KP
Sbjct: 26 LIVGLGNPGAQYDQTRHNAGFDYVDALADRFHGQWKTESKYQADITSIQLAGQKVWLMKP 85
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS+ NF+K+P E LV HD+LD+ G R K GGG GHNGL+ I +
Sbjct: 86 MTFMNRSGQSVGAFANFFKIPANE-ILVAHDELDIPAGNARFKLGGGHGGHNGLRDIIAR 144
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
N + RLR+GIG P + + +VL ER L ID S L + +
Sbjct: 145 LANNKGFYRLRLGIGHPGHASEVTNYVLSKGRPEERISLERAIDAATESTSLAVQGDWAK 204
Query: 180 FLNHIVSVR 188
+N + S +
Sbjct: 205 AMNTLHSFK 213
>gi|320335350|ref|YP_004172061.1| peptidyl-tRNA hydrolase [Deinococcus maricopensis DSM 21211]
gi|319756639|gb|ADV68396.1| Peptidyl-tRNA hydrolase [Deinococcus maricopensis DSM 21211]
Length = 203
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 63/186 (33%), Positives = 101/186 (54%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHN+G++ +D + W+K AE++E +L + +L+K
Sbjct: 1 MRVVVGLGNPGAQYALTRHNVGWLVVDEVARRAGAT-WRKDRDAEVTEVRLGTEKVLLVK 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+++ +M FYKL + + LV+ DDLD FG ++ + GG G NG++ I
Sbjct: 60 PQTFMNSSGRAVAPLMTFYKL-DGAHLLVVQDDLDSPFGLMKFRLGGRHGGQNGVRDIIT 118
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + + RL++GI RPP VL + ER + ++ A ++ A +
Sbjct: 119 RLGTDAFPRLKLGISRPPTGWDPAGWVLSKWRDEERTTVDELVRLGANAVEAWATLGLLE 178
Query: 180 FLNHIV 185
Sbjct: 179 AQARFN 184
>gi|258626132|ref|ZP_05720980.1| Peptidyl-tRNA hydrolase [Vibrio mimicus VM603]
gi|258581487|gb|EEW06388.1| Peptidyl-tRNA hydrolase [Vibrio mimicus VM603]
Length = 196
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + H + KF ++G ++
Sbjct: 6 KLLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLINGQELRVLV 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E +V HD+LDL G + K GGG GHNGLK
Sbjct: 66 PTTFMNLSGKAIAALANFYQIKP-EEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTIS 124
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P + +VLG + E+ L +D R L L K
Sbjct: 125 KLGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLETLMKDGLT 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|315168149|gb|EFU12166.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1341]
Length = 188
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y E +HNIGF+ +D I F A+I+E + + +L+K
Sbjct: 1 MKVIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++ ++ + ++E+ +VI+DDLDL+ G +RL+ G GHNG+KS+
Sbjct: 61 PLTFMNESGRSIGPLLTYFGV-DVEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G N + R++IGIGRP +I HVL F +L + A + + V
Sbjct: 120 HLGTNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHEEMLLAVKKAADAALYACEGHTFV 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 ETMNQFN 186
>gi|326332303|ref|ZP_08198583.1| aminoacyl-tRNA hydrolase [Nocardioidaceae bacterium Broad-1]
gi|325950009|gb|EGD42069.1| aminoacyl-tRNA hydrolase [Nocardioidaceae bacterium Broad-1]
Length = 203
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 71/194 (36%), Positives = 106/194 (54%), Gaps = 10/194 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKF-HAEISEGQL-------DG 53
++V GLGNPG Y +RHNIG++ D + + K A++ EG+L G
Sbjct: 11 WLVVGLGNPGPTYAGHRHNIGYLVTDELANRLGSKWRAHKSGRADVVEGRLRGTTPGVPG 70
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
R +L + +T+MN SG + + FYK+ ++ + IHD+LD+ F T+R+K GGGD GHN
Sbjct: 71 PRVVLARSRTYMNESGGPVKALATFYKV-QPDHVIAIHDELDIAFDTMRVKLGGGDNGHN 129
Query: 114 GLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GLKS+ G ++ R+R+GIGRPP + VL NFS+ ER L ++D A ++ L
Sbjct: 130 GLKSMRSSLGTGDFHRVRVGIGRPPGRQEVHDFVLSNFSTTERKVLPFVVDTAADAIETL 189
Query: 173 AKREDVSFLNHIVS 186
S
Sbjct: 190 ITEGLEKTQQRFNS 203
>gi|306834605|ref|ZP_07467717.1| aminoacyl-tRNA hydrolase [Streptococcus bovis ATCC 700338]
gi|304423241|gb|EFM26395.1| aminoacyl-tRNA hydrolase [Streptococcus bovis ATCC 700338]
Length = 189
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 108/187 (57%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E RHNIGFM IDR+ ++K F AE+ ++G + L+K
Sbjct: 3 KMIVGLGNPGSKYHETRHNIGFMAIDRLAKVFNVTFSEEKNFKAEVGSCFVNGEKVYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + +++++LVI+DDLD++ G +RL+ G GHNG+KSI
Sbjct: 63 PTTFMNNSGIAIHALLTYYNI-DIKDFLVIYDDLDMEVGRIRLRQKGSAGGHNGIKSIIA 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + R+++GIGRP ++ HVLG F + + ++ + ++ + + V
Sbjct: 122 HTGTQAFDRIKVGIGRPKQGRSVVDHVLGKFDQDDYITVTNTLEKVNEAVQFYLQEADFV 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQKFN 188
>gi|15642183|ref|NP_231815.1| peptidyl-tRNA hydrolase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121730803|ref|ZP_01682882.1| peptidyl-tRNA hydrolase [Vibrio cholerae V52]
gi|147675550|ref|YP_001217700.1| peptidyl-tRNA hydrolase [Vibrio cholerae O395]
gi|227082309|ref|YP_002810860.1| peptidyl-tRNA hydrolase [Vibrio cholerae M66-2]
gi|229507738|ref|ZP_04397243.1| peptidyl-tRNA hydrolase [Vibrio cholerae BX 330286]
gi|229512026|ref|ZP_04401505.1| peptidyl-tRNA hydrolase [Vibrio cholerae B33]
gi|229519162|ref|ZP_04408605.1| peptidyl-tRNA hydrolase [Vibrio cholerae RC9]
gi|229607283|ref|YP_002877931.1| peptidyl-tRNA hydrolase [Vibrio cholerae MJ-1236]
gi|254849263|ref|ZP_05238613.1| peptidyl-tRNA hydrolase [Vibrio cholerae MO10]
gi|255745087|ref|ZP_05419036.1| peptidyl-tRNA hydrolase [Vibrio cholera CIRS 101]
gi|262166826|ref|ZP_06034560.1| peptidyl-tRNA hydrolase [Vibrio cholerae RC27]
gi|298497801|ref|ZP_07007608.1| peptidyl-tRNA hydrolase [Vibrio cholerae MAK 757]
gi|14195083|sp|Q9KQ21|PTH_VIBCH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|172047626|sp|A5F686|PTH_VIBC3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783896|sp|C3LPI9|PTH_VIBCM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|9656739|gb|AAF95329.1| peptidyl-tRNA hydrolase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121627624|gb|EAX60305.1| peptidyl-tRNA hydrolase [Vibrio cholerae V52]
gi|146317433|gb|ABQ21972.1| peptidyl-tRNA hydrolase [Vibrio cholerae O395]
gi|227010197|gb|ACP06409.1| peptidyl-tRNA hydrolase [Vibrio cholerae M66-2]
gi|227014080|gb|ACP10290.1| peptidyl-tRNA hydrolase [Vibrio cholerae O395]
gi|229343851|gb|EEO08826.1| peptidyl-tRNA hydrolase [Vibrio cholerae RC9]
gi|229351991|gb|EEO16932.1| peptidyl-tRNA hydrolase [Vibrio cholerae B33]
gi|229355243|gb|EEO20164.1| peptidyl-tRNA hydrolase [Vibrio cholerae BX 330286]
gi|229369938|gb|ACQ60361.1| peptidyl-tRNA hydrolase [Vibrio cholerae MJ-1236]
gi|254844968|gb|EET23382.1| peptidyl-tRNA hydrolase [Vibrio cholerae MO10]
gi|255736917|gb|EET92313.1| peptidyl-tRNA hydrolase [Vibrio cholera CIRS 101]
gi|262024741|gb|EEY43412.1| peptidyl-tRNA hydrolase [Vibrio cholerae RC27]
gi|297542134|gb|EFH78184.1| peptidyl-tRNA hydrolase [Vibrio cholerae MAK 757]
Length = 196
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + H + KF ++ ++
Sbjct: 6 KLLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLINSQELRVLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E +V HD+LDL G + K GGG GHNGLK
Sbjct: 66 PTTFMNLSGKAIAALANFYQIKP-EEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTIS 124
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P + +VLG + E+ L +D R L +L K
Sbjct: 125 KLGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEILMKDGLT 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|325686482|gb|EGD28511.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK72]
Length = 189
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM +D+I K F A+I+ L+G + +K
Sbjct: 3 KLIVGLGNPGEKYIETKHNVGFMLVDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + +KR++IGIGRP + ++ HVLG F + +L +D I ++ +
Sbjct: 122 HIGSQEFKRIKIGIGRPKEGMTVVHHVLGKFDKDDYITILNTLDKIDNAVNYYLQLGNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QAMQKYN 188
>gi|113460649|ref|YP_718715.1| peptidyl-tRNA hydrolase [Haemophilus somnus 129PT]
gi|119390947|sp|Q0I248|PTH_HAES1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|112822692|gb|ABI24781.1| peptidyl-tRNA hydrolase [Haemophilus somnus 129PT]
Length = 194
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ F + + KF + + + G +
Sbjct: 5 KLIVGLGNPGDKYADTRHNAGEWLIERLARRFNFNLSVESKFSGKTARAVISGQEMRFLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++P E LV+HD+LD G ++K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVSALANFYRIPP-EQILVLHDELDFSPGIAKIKQGGGHGGHNGLKDIIA 123
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ KN+ RLRIGIG P D + +VL S +R + ++ + +L K
Sbjct: 124 QLANNKNFYRLRIGIGHPGDKNLVASYVLNKPSPTDRQLIDRSLEEATDCIEILMKEGIT 183
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 184 KATNRLNAFK 193
>gi|94265982|ref|ZP_01289705.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
gi|93453448|gb|EAT03864.1| Aminoacyl-tRNA hydrolase [delta proteobacterium MLMS-1]
Length = 196
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 74/191 (38%), Positives = 112/191 (58%), Gaps = 3/191 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILI 59
M +VAGLGNPG +Y + RHNIGF+ ID + H + K+ A G L G +L+
Sbjct: 1 MRLVAGLGNPGAKYEDTRHNIGFLFIDHLALRHGISLKEESKWEAASGRGTLWGQPVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+++ + FY++ E V HD+LDL FG+ R+ G G GHNG++S+
Sbjct: 61 KPLTYMNLSGRAVGRLARFYRI-EAEAVAVFHDELDLPFGSARVAKGRGAGGHNGVRSLI 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G +++ R R+G+GRPP+ +VL +FS ER L + + L LL R++
Sbjct: 120 DHLGSRDFVRFRLGVGRPPEQHPTAGYVLSSFSPEERQALPDLFALLEEGLQLLLTRDEK 179
Query: 179 SFLNHIVSVRK 189
+ +N I + K
Sbjct: 180 AAMNLINATTK 190
>gi|197284952|ref|YP_002150824.1| peptidyl-tRNA hydrolase [Proteus mirabilis HI4320]
gi|227355354|ref|ZP_03839755.1| peptidyl-tRNA hydrolase [Proteus mirabilis ATCC 29906]
gi|238693173|sp|B4EVR1|PTH_PROMH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|194682439|emb|CAR42332.1| peptidyl-tRNA hydrolase [Proteus mirabilis HI4320]
gi|227164578|gb|EEI49449.1| peptidyl-tRNA hydrolase [Proteus mirabilis ATCC 29906]
Length = 194
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y + RHN G +D + H + KF + L+G L+
Sbjct: 5 KLIVGLANPGADYAQTRHNAGAWYVDLLAQRHQQSLKEESKFFGYTARINLNGNDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++L + NFY++ + LV HD+LDL G +++K GGG+ GHNGLK I
Sbjct: 65 PTTFMNLSGKAVLAMANFYRI-QPDEILVAHDELDLPPGVVKMKLGGGNGGHNGLKDIQS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K N + RLRIGIG P D ++ VLG + E+ + ID +L +
Sbjct: 124 KFSNNPNFYRLRIGIGHPGDKNKVVGFVLGKPPTSEQKLIDDAIDEALACTDILMRDGYE 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAINRLHSFK 193
>gi|261364610|ref|ZP_05977493.1| aminoacyl-tRNA hydrolase [Neisseria mucosa ATCC 25996]
gi|288567199|gb|EFC88759.1| aminoacyl-tRNA hydrolase [Neisseria mucosa ATCC 25996]
Length = 192
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF ID + + +KKF ++ + G L+K
Sbjct: 6 KMIVGLGNPGSEYEQTRHNAGFWFIDELAWQYKATLKEEKKFFGSVARISISGSDLWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PATFMNRSGQAVATLAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G ++ RLR+GI P D ++ +VL S R + I+ +++P+L E
Sbjct: 125 RLGTPDFYRLRLGIDHPGDRNLVVGYVLNKPSPEHRQQIDEAINKSLKAVPMLLAGEWEE 184
Query: 180 FLNHIVS 186
+ + S
Sbjct: 185 AVRFLHS 191
>gi|307150148|ref|YP_003885532.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 7822]
gi|306980376|gb|ADN12257.1| peptidyl-tRNA hydrolase [Cyanothece sp. PCC 7822]
Length = 210
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 106/187 (56%), Gaps = 4/187 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTI-LIK 60
++ GLGNP +Y + RHNIGF +D + + K+F +EG + I L+K
Sbjct: 14 LIIGLGNPEQKYEKTRHNIGFEAVDVLAKSWQLSWQQNKRFQGLFTEGMGASDKKIRLLK 73
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ V+++YKLP E+ LVI+DD+DL G +RL+ G GHNG+KSI
Sbjct: 74 PLTYMNRSGESVRAVLDWYKLPP-ESILVIYDDMDLPLGRIRLRLSGSAGGHNGIKSIIS 132
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ RLRIGIG+ I HVLG FS+ E + I+ + +++ K
Sbjct: 133 HVGSQDFPRLRIGIGKSNGKKETISHVLGRFSADETEVIAKILQLVEQTVKTSMKEGIEK 192
Query: 180 FLNHIVS 186
++ +
Sbjct: 193 AMSLYNN 199
>gi|255318850|ref|ZP_05360076.1| peptidyl-tRNA hydrolase [Acinetobacter radioresistens SK82]
gi|262378892|ref|ZP_06072049.1| peptidyl-tRNA hydrolase [Acinetobacter radioresistens SH164]
gi|255304106|gb|EET83297.1| peptidyl-tRNA hydrolase [Acinetobacter radioresistens SK82]
gi|262300177|gb|EEY88089.1| peptidyl-tRNA hydrolase [Acinetobacter radioresistens SH164]
Length = 193
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 103/187 (55%), Gaps = 2/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++R+ + KFH GQ++G L+ P
Sbjct: 6 LIIGLGNPGTEYAQTRHNAGFWFVERLAEQYGITLKNDPKFHGISGRGQIEGQDIRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS++ FY++ ++ LV HD+LD++ G +RLKTGGG GHNGL+ I+
Sbjct: 66 TTFMNRSGQSVVPFAKFYQITP-QSMLVAHDELDMNPGIIRLKTGGGHGGHNGLRDITPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G ++ RLRIGIG P + HVL E+ + I + + LL E +
Sbjct: 125 TGPDFHRLRIGIGHPGSKERVSGHVLSKAPRSEQELMDDAISHTLSKIKLLVNGEIQQAM 184
Query: 182 NHIVSVR 188
N I + +
Sbjct: 185 NQINAYK 191
>gi|255974756|ref|ZP_05425342.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T2]
gi|256855210|ref|ZP_05560571.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T8]
gi|307278655|ref|ZP_07559725.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0860]
gi|307290198|ref|ZP_07570116.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0411]
gi|255967628|gb|EET98250.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T2]
gi|256709723|gb|EEU24770.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T8]
gi|306498754|gb|EFM68253.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0411]
gi|306504715|gb|EFM73915.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0860]
gi|315028826|gb|EFT40758.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4000]
Length = 188
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y E +HNIGF+ +D I F A+I+E + + +L+K
Sbjct: 1 MKVIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++ ++ + + E+ +VI+DDLDL+ G +RL+ G GHNG+KS+
Sbjct: 61 PLTFMNESGRSVGPLLTYFGV-DEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G N + R++IGIGRP +I HVL F +L + A + + V
Sbjct: 120 HLGTNVFPRIKIGIGRPSKNDTVIHHVLSIFPKETHEEMLLAVKKAADAALYACEGHTFV 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 ETMNQFN 186
>gi|320547718|ref|ZP_08042003.1| aminoacyl-tRNA hydrolase [Streptococcus equinus ATCC 9812]
gi|320447793|gb|EFW88551.1| aminoacyl-tRNA hydrolase [Streptococcus equinus ATCC 9812]
Length = 189
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E RHNIGFM IDR+ + K F AE+ ++G + L+K
Sbjct: 3 KMIVGLGNPGSKYHETRHNIGFMAIDRLAKDLNVTFSEDKNFKAEVGSAFINGEKVYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + +E+++VI+DDLD++ G +RL+ G GHNG+KSI
Sbjct: 63 PTTFMNNSGIAVHALLTYYNIA-IEDFMVIYDDLDMEVGRIRLRQKGSAGGHNGIKSIIA 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + R+++GIGRP ++ HVLG F + + ++ + + + + V
Sbjct: 122 HAGTQAFDRIKVGIGRPKQGRSVVDHVLGKFDKDDYITVTNTLEKVNDVVQFYLQEADFV 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQKFN 188
>gi|170017777|ref|YP_001728696.1| peptidyl-tRNA hydrolase [Leuconostoc citreum KM20]
gi|169804634|gb|ACA83252.1| Peptidyl-tRNA hydrolase [Leuconostoc citreum KM20]
Length = 213
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 63/185 (34%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M V GLGN G +Y + RHNIGFM +D H K A + + +G + +++K
Sbjct: 25 MKYVIGLGNIGTKYEKTRHNIGFMAVDNFAEAHHVAFSPSKQFAIVGKTSTNGEQVLIVK 84
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ ++++Y + LV+ DD+DL FG LR + G GHNGLKSI
Sbjct: 85 PTTYMNDSGKAVRALLDYYGGHIDSDVLVLVDDMDLPFGKLRFRGKGSAGGHNGLKSIIA 144
Query: 121 KCG-KNYKRLRIGIGRPPD-TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G + + RL+ G+G P +I +VLG F+ E+ + ++D +++ + +V
Sbjct: 145 HTGSQAFLRLKFGLGHPQHEQEAVINYVLGQFTRSEQPEIDQMLDRSTQAIDMWLSGAEV 204
Query: 179 SFLNH 183
S L++
Sbjct: 205 SQLSN 209
>gi|159487239|ref|XP_001701641.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280860|gb|EDP06616.1| predicted protein [Chlamydomonas reinhardtii]
Length = 172
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 65/165 (39%), Positives = 98/165 (59%), Gaps = 3/165 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG Y + RHNIGF ID + + K + A + +G+L G + +L+K
Sbjct: 1 MWMIVGLGNPGSNYDDTRHNIGFKVIDELAAAAGIDCRKLEKSAAVGKGELQGKQVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ + FY++P LV+ DDLD +RL+ GG GHNGL+SI +
Sbjct: 61 PVTFMNNSGESVAALAKFYRVPPG-RVLVVADDLDQPTAQVRLRQRGGHGGHNGLRSIID 119
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIID 163
+ G +++ R++IGIGRP I +VL F+ ER + +
Sbjct: 120 RMGGTQDFPRIKIGIGRPSGPIPIASYVLQPFNKAERPEIDTAVQ 164
>gi|217967892|ref|YP_002353398.1| Aminoacyl-tRNA hydrolase [Dictyoglomus turgidum DSM 6724]
gi|217336991|gb|ACK42784.1| Aminoacyl-tRNA hydrolase [Dictyoglomus turgidum DSM 6724]
Length = 193
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 73/180 (40%), Positives = 109/180 (60%), Gaps = 2/180 (1%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
+ GLGNPG+EY RHN+GFM +D + +F+ FP+++K ++ G++ + L+KPQT
Sbjct: 6 IIGLGNPGYEYANTRHNVGFMVVDYLQNFYKFPSYQKTNFNLLTFGKISNTKVYLVKPQT 65
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
+MNLSG + E + + E LVIHDDLDL GT+R+K G D GHNG+KSI ++
Sbjct: 66 YMNLSGIGVKEFIEKFAFAP-EELLVIHDDLDLPIGTIRIKFNGKDGGHNGIKSIIKEIN 124
Query: 124 K-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
N+ RLRIGIG+P D I+ +VLG F+ E + I+ + + + + K N
Sbjct: 125 TSNFYRLRIGIGKPQDKNQIVEYVLGKFNEDELKTIEKILQSSHQIIETIIKEGWDKAQN 184
>gi|229528809|ref|ZP_04418199.1| peptidyl-tRNA hydrolase [Vibrio cholerae 12129(1)]
gi|229332583|gb|EEN98069.1| peptidyl-tRNA hydrolase [Vibrio cholerae 12129(1)]
Length = 196
Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + H + KF ++ ++
Sbjct: 6 KLLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLINNQELRVLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E +V HD+LDL G + K GGG GHNGLK
Sbjct: 66 PTTFMNLSGKAIAALANFYQIKP-EEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTIS 124
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P + +VLG + E+ L +D R L +L K
Sbjct: 125 KLGNNKEFYRLRLGIGHPGHKDKVSGYVLGKAPAKEQECLDAAVDESVRCLEILLKDGLT 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|258621060|ref|ZP_05716094.1| Peptidyl-tRNA hydrolase [Vibrio mimicus VM573]
gi|258586448|gb|EEW11163.1| Peptidyl-tRNA hydrolase [Vibrio mimicus VM573]
Length = 196
Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + H + KF ++G ++
Sbjct: 6 KLLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRLLVNGQELRVLV 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E +V HD+LDL G + K GGG GHNGLK
Sbjct: 66 PTTFMNLSGKAIAALANFYQIKP-EEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTIS 124
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P + +VLG + E+ L +D R L +L K
Sbjct: 125 KLGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEILMKDGLT 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|108757656|ref|YP_633231.1| peptidyl-tRNA hydrolase [Myxococcus xanthus DK 1622]
gi|119390966|sp|Q1D292|PTH_MYXXD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|108461536|gb|ABF86721.1| peptidyl-tRNA hydrolase [Myxococcus xanthus DK 1622]
Length = 191
Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats.
Identities = 79/189 (41%), Positives = 109/189 (57%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY +RHNIGFM ++ + S ++KF A++ +G L G R + ++
Sbjct: 1 MKLIVGLGNPGREYERHRHNIGFMVVEALLSRARAQLNQEKFAAKVGQGTLAGERVLFVE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ E F+K+P + + LVIHD+LDL G L+LK GGG GHNGLKSI
Sbjct: 61 PQTFMNLSGRSVAEAARFFKVP-VADVLVIHDELDLPLGRLQLKAGGGSGGHNGLKSIVS 119
Query: 121 KCGKN-YKRLRIGIGRPPD---TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G + RLR GIG+P + +VL NF ER + +ID L +
Sbjct: 120 SLGDESFIRLRFGIGKPEGPNARERVSDYVLSNFDDGERREMDALIDRAMDMTELWIREG 179
Query: 177 DVSFLNHIV 185
+N
Sbjct: 180 LSVAMNRFN 188
>gi|322388484|ref|ZP_08062087.1| aminoacyl-tRNA hydrolase [Streptococcus infantis ATCC 700779]
gi|321140797|gb|EFX36299.1| aminoacyl-tRNA hydrolase [Streptococcus infantis ATCC 700779]
Length = 189
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 108/187 (57%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F AE++ L+G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQAELASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIEDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + R++IGIGRP ++ HVL F + +L ID + ++ L ++
Sbjct: 122 HIGTQVFNRVKIGIGRPKKGMSVVHHVLSKFDKDDYIGILQSIDKVDDAVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQKYN 188
>gi|166710810|ref|ZP_02242017.1| peptidyl-tRNA hydrolase [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 194
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 66/188 (35%), Positives = 94/188 (50%), Gaps = 3/188 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D + A K E ++ + G L+KP
Sbjct: 6 LIVGLGNPGQEHAQTRHNAGFRFVDALIERSGARWALDSKLFGETAKVDIAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E+ LV HD+LDL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSITAALRFWKIEP-EHLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG + + ID LPL +
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGREDDAAIGTAIDAAIDVLPLAMEGHFSEA 184
Query: 181 LNHIVSVR 188
+ + + R
Sbjct: 185 MKRLHTSR 192
>gi|229844443|ref|ZP_04464583.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 6P18H1]
gi|229812692|gb|EEP48381.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 6P18H1]
Length = 194
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ + KF + + ++G L+
Sbjct: 5 KLIVGLGNPGEKYADTRHNAGEWLIERLARRFKVLLNPENKFFGKTARTLVNGKEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LVIHD+LDL G +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALASFYRIKP-EEILVIHDELDLPAGVAKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P + +VL S +R L ++D + ++ K V
Sbjct: 124 QLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPADRDALEKVLDEATDCVEMIFKDGMV 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNCLNSFK 193
>gi|187251695|ref|YP_001876177.1| aminoacyl-tRNA hydrolase [Elusimicrobium minutum Pei191]
gi|226723254|sp|B2KE94|PTH_ELUMP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|186971855|gb|ACC98840.1| Aminoacyl-tRNA hydrolase [Elusimicrobium minutum Pei191]
Length = 187
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 59/185 (31%), Positives = 87/185 (47%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GFM +D + K E + + G L KP
Sbjct: 3 KLIVGLGNPGPQYAVTRHNAGFMIVDNLAVKLGVNFNAYKNLGEYVKTTIGGQDVFLAKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+ + + FYK+ E LV DD+ ++ G +R++ G G NG+K+I E
Sbjct: 63 LTFMNLSGRMVTHLAGFYKIKPQE-ILVCFDDISINLGAVRIRKDGSAGGQNGMKNIIEL 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ RLR G+G P+ +VL FS + L I+ + K
Sbjct: 122 FGTQDIPRLRFGVGPKPERFDSADYVLSKFSKSDEKLLNESIEAAVEAAESCVKDGLERA 181
Query: 181 LNHIV 185
+N
Sbjct: 182 MNKFN 186
>gi|326514970|dbj|BAJ99846.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 231
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 66/180 (36%), Positives = 99/180 (55%), Gaps = 3/180 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN+GF ID I K+F + + +G + + +L KP
Sbjct: 31 WLFVGLGNPGRMYKGTRHNVGFEMIDAIAEAEGISVSTKQFKSMVGKGLIGDVPVMLAKP 90
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+S+ ++++++K+P L ++I+DDLDL F LRL GG GHNG++S+
Sbjct: 91 QTFMNASGESVGQLVSYFKIP-LNQVVLIYDDLDLPFAKLRLLPKGGHGGHNGVRSVIHH 149
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ RLRIGIGRP I VL FS E+ L R++ ++
Sbjct: 150 LKQSRDFPRLRIGIGRPTGMMGAIGFVLRAFSKEEQEELDSTFLRGLRAVRIMLLEGFNK 209
>gi|294635776|ref|ZP_06714236.1| aminoacyl-tRNA hydrolase [Edwardsiella tarda ATCC 23685]
gi|291090876|gb|EFE23437.1| aminoacyl-tRNA hydrolase [Edwardsiella tarda ATCC 23685]
Length = 196
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + L G L+
Sbjct: 4 KLIVGLANPGAEYAQTRHNAGAWFVDALAERHGQSLKDESKFFGYTARLNLAGHDLRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY + E LV HD+LDL G +LK GGG+ GHNGLK I
Sbjct: 64 PTTFMNLSGKAVSALAGFYHIAPDE-ILVAHDELDLPPGVAKLKLGGGNGGHNGLKDIQS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + ++ VLG + E+ + ID R +L +
Sbjct: 123 KLGNNPNFYRLRIGIGHPGDKSKVVGFVLGKPLASEQPLIDEAIDEALRCTEVLMRDGME 182
Query: 179 SFLNHIVSVR 188
+N +
Sbjct: 183 KAMNRQNGFK 192
>gi|270261421|ref|ZP_06189694.1| peptidyl-tRNA hydrolase [Serratia odorifera 4Rx13]
gi|270044905|gb|EFA17996.1| peptidyl-tRNA hydrolase [Serratia odorifera 4Rx13]
Length = 196
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 100/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLAQRHNQQLKEESKFFGYTARLNLAGNDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++L + +FY++ E LV HD+LD+ G ++K GGG+ GHNGLK I
Sbjct: 65 PTTFMNLSGKAVLAMASFYRIEPDE-ILVAHDELDIPPGVAKIKLGGGNGGHNGLKDIQN 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG + E+ + ID AR +L
Sbjct: 124 KFGNNPNFYRLRIGIGHPGDKNKVVGFVLGKPPASEQKMIDEAIDEAARCTEVLMTDGLE 183
Query: 179 SFLNHIVSVR 188
+ + S +
Sbjct: 184 KTVRRLHSFK 193
>gi|297582077|ref|ZP_06943996.1| peptidyl-tRNA hydrolase [Vibrio cholerae RC385]
gi|297533772|gb|EFH72614.1| peptidyl-tRNA hydrolase [Vibrio cholerae RC385]
Length = 196
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + + + KF ++ ++
Sbjct: 6 KLLVGLANPGPEYAKTRHNAGAWVVEELARINNVTLKNEPKFFGLTGRLLINSQELRVLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E +V HD+LDL G + K GGG GHNGLK
Sbjct: 66 PTTFMNLSGKAIAALANFYQIKP-EEIMVAHDELDLPPGVAKFKQGGGHGGHNGLKDTIS 124
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P + +VLG + E+ L +D R L +L K
Sbjct: 125 KLGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEILLKDGLT 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|71278842|ref|YP_270233.1| peptidyl-tRNA hydrolase [Colwellia psychrerythraea 34H]
gi|119390929|sp|Q47Y87|PTH_COLP3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71144582|gb|AAZ25055.1| peptidyl-tRNA hydrolase [Colwellia psychrerythraea 34H]
Length = 194
Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 104/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++AGLGNPG EY + RHN G ++ + H +KK+ +G + G L+
Sbjct: 4 KLIAGLGNPGPEYSKTRHNAGVWFVEELARSHNISLRPEKKYSGLYGKGLIAGNLVHLLI 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + NFYK+ +++ LV HD+LD+ G ++K GGG GHNGL+ I +
Sbjct: 64 PTTFMNRSGQAVAPLANFYKI-SVDEILVAHDELDMLPGVCKIKKGGGHGGHNGLRDIID 122
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ K++ RLRIGI P + HVLG S E+ + ID +R L + K +
Sbjct: 123 RMANNKDFYRLRIGIDHPGHRDKVTGHVLGKAPSAEQAKIEQAIDEASRCLDIWLKDDLK 182
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 183 KAQNRLHSFK 192
>gi|189500048|ref|YP_001959518.1| peptidyl-tRNA hydrolase [Chlorobium phaeobacteroides BS1]
gi|238692300|sp|B3EQK4|PTH_CHLPB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189495489|gb|ACE04037.1| Aminoacyl-tRNA hydrolase [Chlorobium phaeobacteroides BS1]
Length = 189
Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 95/186 (51%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP + RHNIGF ID + K + ++ G I++K
Sbjct: 1 MKLIVGLGNPEKRHENTRHNIGFEVIDEMARLFQTGMTTGKGNFHHAKITHRGKGVIVLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG +++ MNFYK+P +E LVI DDL++ G++RL+ G G NGLK I +
Sbjct: 61 PMTYMNLSGHAVVAAMNFYKIP-VEEILVICDDLNIPLGSIRLRAKGSAGGQNGLKHIIQ 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+ ++ RLR+GIGR + VLG FS ER II A +
Sbjct: 120 CLGREDFARLRVGIGRDHPSGSYSSFVLGKFSEEERKTADSIIPECAEAALDFVVHGIEH 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNRFN 185
>gi|190571326|ref|YP_001975684.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018722|ref|ZP_03334530.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357598|emb|CAQ55039.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995673|gb|EEB56313.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 187
Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 78/186 (41%), Positives = 119/186 (63%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y HNIGF+ ID I+ + F ++ KK I+ G ++ + +LIK
Sbjct: 1 MHLIAGLGNPGSQYELTHHNIGFIVIDAIYKYWNFQSFSKKADYLITSGIINNNKVMLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +FMN SG + ++ NFYKL +L+N +VIHDD DL FG +++K GG AGHNGLKSI
Sbjct: 61 PYSFMNNSGIPVAKIKNFYKL-SLDNIVVIHDDADLKFGRIKVKKGGSSAGHNGLKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLR G+GRP + +VL F + + L +++ IA+++ L+ + + +F
Sbjct: 120 FIGNDYWRLRFGVGRPEGQKSLADYVLSKFENFDNVIL--LVEKIAKNIHLMLQGDTTAF 177
Query: 181 LNHIVS 186
+N + S
Sbjct: 178 INSVES 183
>gi|315612155|ref|ZP_07887070.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis ATCC 49296]
gi|315315716|gb|EFU63753.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis ATCC 49296]
Length = 189
Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ +G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFSFNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + R++IGIGRP ++ HVL F + +L ID + ++ L ++
Sbjct: 122 HIGTQVFNRVKIGIGRPKKGMSVVHHVLSKFDQDDYVGILQSIDKVDDAVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|52424611|ref|YP_087748.1| peptidyl-tRNA hydrolase [Mannheimia succiniciproducens MBEL55E]
gi|68052916|sp|Q65V47|PTH_MANSM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|52306663|gb|AAU37163.1| Pth protein [Mannheimia succiniciproducens MBEL55E]
Length = 194
Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G ++R+ F + KF + + + G +
Sbjct: 5 KLIVGLGNPGDKYADTRHNAGEWLVERLARRFNFNLKDEAKFFGKTARAVIGGEEVRFLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E LVIHD+LDL G ++K GGG GHNGLK
Sbjct: 65 PTTFMNLSGKAVGALATFYRIKP-EEILVIHDELDLPPGVAKIKQGGGHGGHNGLKDTIA 123
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ KN+ RLRIGIG P D + +VL S +R + +D A + +L K
Sbjct: 124 QLANNKNFYRLRIGIGHPGDKNLVSAYVLSKPSPIDRSAIDKALDEAASCMEILLKDGIT 183
Query: 179 SFLNHIVSVR 188
N + +
Sbjct: 184 KATNRLNGFK 193
>gi|269102021|ref|ZP_06154718.1| peptidyl-tRNA hydrolase [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268161919|gb|EEZ40415.1| peptidyl-tRNA hydrolase [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 196
Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 96/189 (50%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G ++ + H + K+ +G L+ P
Sbjct: 7 LLVGLANPGQEYAKTRHNAGAWVVEELARVHNVTLREDAKYFGLTGRITTNGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+++ E LV HD+LDL G + K GGG GHNGL+ I K
Sbjct: 67 TTFMNLSGKSVAALAKFFQI-QPEEILVAHDELDLPPGVAKFKKGGGHGGHNGLRDIISK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLRIGIG P D + VLG + E+ + +D R + +L K
Sbjct: 126 MGNNKDFYRLRIGIGHPGDKNKVAGFVLGKAPAKEQELIDAAVDEAVRCMDILLKDGLSK 185
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 186 AQNRLHSFK 194
>gi|190572920|ref|YP_001970765.1| peptidyl-tRNA hydrolase [Stenotrophomonas maltophilia K279a]
gi|229485512|sp|B2FQ21|PTH_STRMK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|190010842|emb|CAQ44451.1| putative peptidyl-tRNA hydrolase [Stenotrophomonas maltophilia
K279a]
Length = 192
Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 61/188 (32%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN GF ++ + K E ++ ++ G L+KP
Sbjct: 6 LIVGLGNPGSEHARTRHNAGFHFVEALAEKAGARWNVDSKLFGETAKVEIAGQTVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ F+K+ E L HD+LDL G RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSVTAAQRFWKIEPEETLL-AHDELDLAPGVARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG S + + ID+ +PL + +
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVGWVLGRPSKEDDVLIARAIDDAIDVMPLAVQGDFSEA 184
Query: 181 LNHIVSVR 188
+ + + +
Sbjct: 185 MKRLHTPK 192
>gi|187732998|ref|YP_001879987.1| peptidyl-tRNA hydrolase [Shigella boydii CDC 3083-94]
gi|238691753|sp|B2TZV2|PTH_SHIB3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|187429990|gb|ACD09264.1| peptidyl-tRNA hydrolase [Shigella boydii CDC 3083-94]
Length = 194
Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ N + LV HD+LDL G +LK GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKLKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 123 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 182
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 183 KATNRLHAFK 192
>gi|113969351|ref|YP_733144.1| peptidyl-tRNA hydrolase [Shewanella sp. MR-4]
gi|114046578|ref|YP_737128.1| peptidyl-tRNA hydrolase [Shewanella sp. MR-7]
gi|119391004|sp|Q0HLI0|PTH_SHESM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391005|sp|Q0HXT4|PTH_SHESR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|113884035|gb|ABI38087.1| peptidyl-tRNA hydrolase [Shewanella sp. MR-4]
gi|113888020|gb|ABI42071.1| peptidyl-tRNA hydrolase [Shewanella sp. MR-7]
Length = 195
Score = 224 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + K+ + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVEELARICGVSLVPDSKYFGLTARAVLHGKDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 65 PTTYMNLSGKAVGALANFFRITP-EEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K + + RLRIGIG P D + +VLG + E+ + +D RS +L K + V
Sbjct: 124 KLANDKNFYRLRIGIGHPGDKNKVSGYVLGKAPAKEQELINAAVDEAVRSTEVLFKEDMV 183
Query: 179 SFLNHIVSVR 188
+ + S +
Sbjct: 184 KAMTRLHSFK 193
>gi|283780444|ref|YP_003371199.1| peptidyl-tRNA hydrolase [Pirellula staleyi DSM 6068]
gi|283438897|gb|ADB17339.1| peptidyl-tRNA hydrolase [Pirellula staleyi DSM 6068]
Length = 189
Score = 224 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y RHN+GF + + A +++F +S+G L + +L+K
Sbjct: 1 MKLIVGLGNPGSRYQGTRHNVGFEVVSIVARRVQATAEREQFSGLVSQGNLGPEKMLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN+SG S+L +FYK+ + L+I DD L G LR + G G GL +
Sbjct: 61 PTTFMNVSGSSVLAARDFYKIETA-DILIICDDFALPLGKLRFRAKGSSGGQKGLDDVIR 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + RLR+GIG PP + VL F+ E+ A + + +
Sbjct: 120 RLGTDAVPRLRVGIGAPPSGWDVANFVLSRFNKDEQIEAEISWQLAADGVQTFVQEGIQA 179
Query: 180 FLNHIVS 186
+N +
Sbjct: 180 CMNKFNA 186
>gi|260655929|ref|ZP_05861398.1| aminoacyl-tRNA hydrolase [Jonquetella anthropi E3_33 E1]
gi|260629545|gb|EEX47739.1| aminoacyl-tRNA hydrolase [Jonquetella anthropi E3_33 E1]
Length = 199
Score = 224 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 96/190 (50%), Gaps = 3/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEI-SEGQLDGLRTILI 59
M ++ GLGNPG EY + RHN G+M +DR+ + KF ++ + R +L+
Sbjct: 1 MRLIVGLGNPGIEYAQTRHNAGWMLLDRLVDRLNAGGGQGKFSGQLWGPLSVGSERLLLL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SGQ++ EV ++ + + LV+ D+++L G LR +T G GHNGLKS+
Sbjct: 61 KPLTYMNASGQAVGEVARYWNIAP-SDILVLSDEINLAPGRLRFRTSGSAGGHNGLKSVI 119
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G + RLRIG+G P + + HVLG S +R + L
Sbjct: 120 AHLGTAEFGRLRIGVGGKPQGSDLADHVLGRMSPTDRELEERALQAAEEFCLLWLTETPS 179
Query: 179 SFLNHIVSVR 188
+N + R
Sbjct: 180 ELMNQVNGFR 189
>gi|146296228|ref|YP_001179999.1| aminoacyl-tRNA hydrolase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|167011991|sp|A4XIS3|PTH_CALS8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145409804|gb|ABP66808.1| peptidyl-tRNA hydrolase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 189
Score = 224 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 4/185 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+AGLGNPG Y RHN GF+ ID + K KF + + +L+KP
Sbjct: 3 YIIAGLGNPGERYTFTRHNAGFLAIDYLAQAFNTKVDKIKFKGLTGSFEYADKKVLLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG S++E +NFYK+ E +VI+DD+ D G ++++ G D GHNG+KSI ++
Sbjct: 63 MTYMNSSGDSIVEAVNFYKVKP-EKLIVIYDDIAFDVGVVKMRKKGSDGGHNGVKSIIQR 121
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + R+RIGIG P ++++VL F E+ + I+ A+ + +L +
Sbjct: 122 LGTEEFPRIRIGIGVP--KEDMVKYVLSEFEDYEKQKIFRAIEKAAQGIKILLESGIDRA 179
Query: 181 LNHIV 185
+N+I
Sbjct: 180 MNYIN 184
>gi|262281637|ref|ZP_06059406.1| peptidyl-tRNA hydrolase [Streptococcus sp. 2_1_36FAA]
gi|262262091|gb|EEY80788.1| peptidyl-tRNA hydrolase [Streptococcus sp. 2_1_36FAA]
Length = 189
Score = 224 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM +D++ K F +EI+ L+G + IK
Sbjct: 3 KLIVGLGNPGEKYFETKHNVGFMLVDKLCKDLNLKFTVDKIFQSEIASTFLNGEKVYFIK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L +E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-EVEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G +++KR++IGIGRP + ++ HVLG F + +L +D + ++ +
Sbjct: 122 HIGTQDFKRVKIGIGRPKEGMTVVHHVLGKFDRDDYITILNTLDKVDNAVNYYLQSGNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QAMQKYN 188
>gi|154173637|ref|YP_001408880.1| peptidyl-tRNA hydrolase [Campylobacter curvus 525.92]
gi|166199318|sp|A7H088|PTH_CAMC5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|112803759|gb|EAU01103.1| peptidyl-tRNA hydrolase [Campylobacter curvus 525.92]
Length = 181
Score = 224 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 76/189 (40%), Positives = 108/189 (57%), Gaps = 11/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP +Y RHNIGFM ID + + +F KF E+ + +L+K
Sbjct: 1 MTLIVGLGNPTSKYENTRHNIGFMLIDALKNSNFTDVSSSKFQGELFKYS----NLLLLK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG S+ V +FYK E +VIHDDLDL FG ++ K GG GHNG++SI
Sbjct: 57 PTTFMNLSGNSVKAVNDFYK---PERIIVIHDDLDLPFGAMKFKKGGSSGGHNGIRSIDT 113
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+RIGIGR + + VLG FS E+ L I++ +++ L K + S
Sbjct: 114 LIGNDYERVRIGIGR---SGNAANFVLGEFSPEEKEHLAEILEYGTQAVNELIKSDIESV 170
Query: 181 LNHIVSVRK 189
+++K
Sbjct: 171 AQK-FTIKK 178
>gi|309799276|ref|ZP_07693524.1| peptidyl-tRNA hydrolase [Streptococcus infantis SK1302]
gi|308117121|gb|EFO54549.1| peptidyl-tRNA hydrolase [Streptococcus infantis SK1302]
Length = 189
Score = 224 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 108/187 (57%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F AE++ L+G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQAELASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHSLLTYYGL-DIEDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + R++IGIGRP ++ HVL F + +L ID + ++ L ++
Sbjct: 122 HIGTQVFNRVKIGIGRPKKGMSVVHHVLSKFDKDDYIGILQSIDKVDDAVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQKYN 188
>gi|257064879|ref|YP_003144551.1| peptidyl-tRNA hydrolase [Slackia heliotrinireducens DSM 20476]
gi|256792532|gb|ACV23202.1| peptidyl-tRNA hydrolase [Slackia heliotrinireducens DSM 20476]
Length = 190
Score = 224 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 94/190 (49%), Gaps = 1/190 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF + + WK + A ++ G +L K
Sbjct: 1 MRLIVGLGNPGEEYDHTRHNAGFDTVSLLAEELRVNYWKTECGALTAKTTYRGEDVLLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ+FMN+SG + ++ Y++ + +VIHD+LD+D GT+R+K GGG AGHNGLKSI
Sbjct: 61 PQSFMNVSGGPVKQLCAKYEVDPKTDLIVIHDELDIDPGTIRVKFGGGLAGHNGLKSIDA 120
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K +++ R+RIGIGRPP + VL + ++
Sbjct: 121 KLQTRDWLRIRIGIGRPPGRMPVTDWVLSKPKKEAWDDFVQGTQLGCEAVLYYMDNGLDK 180
Query: 180 FLNHIVSVRK 189
S K
Sbjct: 181 AQQKYNSSAK 190
>gi|288817437|ref|YP_003431784.1| peptidyl-tRNA hydrolase [Hydrogenobacter thermophilus TK-6]
gi|288786836|dbj|BAI68583.1| peptidyl-tRNA hydrolase [Hydrogenobacter thermophilus TK-6]
gi|308751044|gb|ADO44527.1| peptidyl-tRNA hydrolase [Hydrogenobacter thermophilus TK-6]
Length = 190
Score = 224 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 59/186 (31%), Positives = 102/186 (54%), Gaps = 2/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GFM ID + ++++ + + ++ G +L KP
Sbjct: 3 KLLVGLGNPGKKYQHTRHNVGFMVIDELAKKLKLREYREECLSHLYRARIGGRDVLLAKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG +++ ++ Y + E +V++DDLDL G +RL+ G GH+G++SI +
Sbjct: 63 QTYMNNSGLAVINLLEEYSILPDE-MIVVYDDLDLPLGRIRLRLEGSSGGHHGIESIIRE 121
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ + RL++GIGRP D ++ +VL FS E+ L +++ L +
Sbjct: 122 VKTEKFPRLKVGIGRPKDKNQVVSYVLSPFSEDEQTLLYRVLERSRECLIRCVEFSPEDA 181
Query: 181 LNHIVS 186
+N S
Sbjct: 182 MNFCNS 187
>gi|269118736|ref|YP_003306913.1| peptidyl-tRNA hydrolase [Sebaldella termitidis ATCC 33386]
gi|268612614|gb|ACZ06982.1| peptidyl-tRNA hydrolase [Sebaldella termitidis ATCC 33386]
Length = 190
Score = 224 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 106/190 (55%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA--WKKKFHAEISEGQLDGLRTIL 58
M ++ GLGNPG Y RHN GF+ +D + F + +K KF EI+E G + +
Sbjct: 1 MKLIVGLGNPGENYKMTRHNAGFIYVDEYLKENGFRSRDYKNKFKGEIAELNKLGKKALF 60
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP TFMNLSG+S+ E +NFYKL + VI+DD+DL+ G ++++ G GHNG+KSI
Sbjct: 61 LKPLTFMNLSGESVREAVNFYKLDPAHDLFVIYDDMDLELGRIKIRKNGRPGGHNGIKSI 120
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G + R++ GIGRP ++ +VLG + E+ L + I + + +D
Sbjct: 121 ISHVGPEFIRIKCGIGRPGGRTDVVNYVLGKLTDEEKEVLKENRERINSLIDDIIDGKDA 180
Query: 179 SFLNHIVSVR 188
L + + +
Sbjct: 181 DQLMAVYNQK 190
>gi|322375220|ref|ZP_08049734.1| aminoacyl-tRNA hydrolase [Streptococcus sp. C300]
gi|321280720|gb|EFX57759.1| aminoacyl-tRNA hydrolase [Streptococcus sp. C300]
Length = 189
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 108/187 (57%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + R++IGIGRP ++ HVL F + +L ID + ++ L ++
Sbjct: 122 HIGTQVFNRIKIGIGRPKKGMSVVHHVLSKFDQDDYVGILQSIDKVDDAVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|302551982|ref|ZP_07304324.1| peptidyl-tRNA hydrolase [Streptomyces viridochromogenes DSM 40736]
gi|302469600|gb|EFL32693.1| peptidyl-tRNA hydrolase [Streptomyces viridochromogenes DSM 40736]
Length = 200
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 76/191 (39%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLD-----GLR 55
+++ GLGNPG EY NRHN+GFM D + + + A++ EG++ R
Sbjct: 11 WLIVGLGNPGPEYAGNRHNVGFMVADLLADRVGGRFKRAGRAQAQVVEGRIGPPGPLNRR 70
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
I+ KP ++MNLSG + + FYK+P + +HD+LD+D+GTLRLK GGGD GHNGL
Sbjct: 71 VIVAKPMSYMNLSGGPVNTLREFYKVPVAHV-VAVHDELDIDYGTLRLKLGGGDNGHNGL 129
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
KS+++ G Y R+R GIGRPP + VL +FSS ER L +D A ++ L
Sbjct: 130 KSMTKAFGSEYHRVRFGIGRPPGRMPVADFVLRDFSSVERKELDYFVDRAADAVECLVIE 189
Query: 176 EDVSFLNHIVS 186
+ S
Sbjct: 190 GLERAQSTYNS 200
>gi|153003000|ref|YP_001377325.1| peptidyl-tRNA hydrolase [Anaeromyxobacter sp. Fw109-5]
gi|166199301|sp|A7H6J5|PTH_ANADF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|152026573|gb|ABS24341.1| Aminoacyl-tRNA hydrolase [Anaeromyxobacter sp. Fw109-5]
Length = 192
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY RHN+GF+ DR+ +KF +E++EG+ G R ++K
Sbjct: 1 MKLVVGLGNPGPEYARTRHNVGFLVADRLALALRAEFTLRKFASELAEGRAGGERVWIMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++F+KL LE+ +V+HDDL+L+ ++LK GGG GHNGLKS++
Sbjct: 61 PQTYMNHSGESVGSALHFWKL-GLEDLVVVHDDLELEPFRVQLKVGGGHGGHNGLKSVNA 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y R+R+G+GRPP +VLG F+ + L + + L +
Sbjct: 120 HVGGPDYARVRVGVGRPPPRMDPADYVLGRFAKADEAPLEECLVRATEAARLAIELGAAK 179
Query: 180 FLNHIV 185
+N +
Sbjct: 180 AMNQVN 185
>gi|168830301|gb|ACA34398.1| Pth [uncultured bacterium pTW2]
Length = 193
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 64/188 (34%), Positives = 91/188 (48%), Gaps = 3/188 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN GF +D + + K E + ++ G L+KP
Sbjct: 6 LIVGLGNPGPEHLRTRHNAGFWFVDALAQQCGARFGLESKLFGETCKVEIAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + ++K+ E L HD+LDL G RLK GG G NGL+ +
Sbjct: 66 ATFMNLSGKSVTAALRYWKIEPGEALL-AHDELDLPPGAARLKFDGGHGGQNGLRDTMQL 124
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLRIGIG P + VLG + +L I N LPL +
Sbjct: 125 LGHGRFHRLRIGIGHPGHKDRVTPWVLGKPGRDDEAAILHAIGNALDVLPLAVAGDFNEA 184
Query: 181 LNHIVSVR 188
+ + + R
Sbjct: 185 MKRLHTPR 192
>gi|34762679|ref|ZP_00143670.1| Peptidyl-tRNA hydrolase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|294784149|ref|ZP_06749450.1| aminoacyl-tRNA hydrolase [Fusobacterium sp. 3_1_27]
gi|27887636|gb|EAA24714.1| Peptidyl-tRNA hydrolase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|294488219|gb|EFG35564.1| aminoacyl-tRNA hydrolase [Fusobacterium sp. 3_1_27]
Length = 191
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 70/183 (38%), Positives = 109/183 (59%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHN+GF+ +D + ++KF A +SE +DG + I K
Sbjct: 1 MRVVIGLGNPGKKYERTRHNMGFIVVDSLRKKLNINDEREKFQALVSEKNIDGDKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG +++E++NFYKL ++ +VI+DD+DL FG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNAVIEIINFYKLDPKKDIIVIYDDMDLSFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL-PLLAKREDVS 179
G+ + R++ GIG + HVLG F+ E+ L I++ + + +L +
Sbjct: 121 HIGEEFIRIKCGIG--AKEKDAVEHVLGEFNQTEQKDLDEILEIVDNCVIEILTVQNLDR 178
Query: 180 FLN 182
+
Sbjct: 179 IMQ 181
>gi|308050541|ref|YP_003914107.1| peptidyl-tRNA hydrolase [Ferrimonas balearica DSM 9799]
gi|307632731|gb|ADN77033.1| peptidyl-tRNA hydrolase [Ferrimonas balearica DSM 9799]
Length = 198
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 96/188 (51%), Gaps = 4/188 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G + + H + KF Q L+ P
Sbjct: 7 LIVGLANPGPEYAHTRHNAGEWLVKELARAHNVTLKSESKFFGLTGRIQSGSQDLRLLVP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + NFY L E LV HD+LDL G R+K GGG GHNGLK I +
Sbjct: 67 TTFMNLSGKAVGAMANFYGLEP-EQILVAHDELDLPPGVARIKQGGGHGGHNGLKDIIKA 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + RLRIGIG P D + +VLG +PE+ + +D +RS+ +L +
Sbjct: 126 LGNNKEFYRLRIGIGHPGDRNRVSGYVLGKAPAPEQRAIDEAVDEASRSIDILLRDGITK 185
Query: 180 FLNHIVSV 187
N + +
Sbjct: 186 AQNRLHTF 193
>gi|327463839|gb|EGF10155.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK1057]
Length = 189
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM +D+I + K F A+I+ L+G + +K
Sbjct: 3 KLIVGLGNPGEKYIETKHNVGFMLVDKICKYLDLKFTADKIFQADIASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + +KR++IGIGRP + ++ HVLG F + +L +D + ++ +
Sbjct: 122 HIGSQEFKRIKIGIGRPKEGMTVVHHVLGKFDKDDYITILNTLDKVDNAVNYYLQSGNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QTMQKYN 188
>gi|116072067|ref|ZP_01469335.1| peptidyl-tRNA hydrolase [Synechococcus sp. BL107]
gi|116065690|gb|EAU71448.1| peptidyl-tRNA hydrolase [Synechococcus sp. BL107]
Length = 205
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 70/193 (36%), Positives = 103/193 (53%), Gaps = 8/193 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHNIGFM ++R+ F ++ K H +++ R L+ P
Sbjct: 7 LVVGLGNPGSKYDGTRHNIGFMALERLALREGFSFRQQAKLHGLVADMGFGDQRLRLLMP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+S+ +++Y E+ +++ DD+DL G LRL+ G GHNGL+S +
Sbjct: 67 QTFMNDSGRSVRAALDWYGF-QPEDIVLLVDDMDLPLGRLRLRAQGSAGGHNGLRSTIQH 125
Query: 122 CGKN-YKRLRIGIGRPPD-----TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G + RLRIGIG P + A + HVLG FS E+ + ++D + L L K+
Sbjct: 126 LGTQVFPRLRIGIGAPAENPAERRARTVSHVLGPFSRAEQPCVDAVLDAVLDGLDRLKKQ 185
Query: 176 EDVSFLNHIVSVR 188
I R
Sbjct: 186 GMERAGTWINGFR 198
>gi|313112803|ref|ZP_07798450.1| peptidyl-tRNA hydrolase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624873|gb|EFQ08181.1| peptidyl-tRNA hydrolase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 192
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNP +Y RHN G+ +D + K KF +G++DG + +L+KP
Sbjct: 7 WLIAGLGNPETKYDGTRHNAGYAALDYLADKWGISVSKTKFEGLWGQGEVDGHKVVLLKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG S+ F+K+P ++ +V+ DD+ G LR++ G GHNGLKSI +
Sbjct: 67 LTYMNLSGDSIAPTAGFFKIP-ADHVIVLCDDITQSPGKLRIRPSGSAGGHNGLKSIIAR 125
Query: 122 C-GKNYKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+N+ R+RIG+G P + VLG F + + L ++ + L+ +
Sbjct: 126 LGGENFPRIRIGVGAKPHPDYDLAAWVLGKFPAEDAKALSGRYPDLEAAAKLIMDGKLSL 185
Query: 180 FLNHIV 185
+
Sbjct: 186 AQSKYN 191
>gi|167625131|ref|YP_001675425.1| peptidyl-tRNA hydrolase [Shewanella halifaxensis HAW-EB4]
gi|189038165|sp|B0TR35|PTH_SHEHH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|167355153|gb|ABZ77766.1| Aminoacyl-tRNA hydrolase [Shewanella halifaxensis HAW-EB4]
Length = 194
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y RHN G ++ + K+ + L G L+
Sbjct: 5 KLIVGLANPGAQYERTRHNAGAWYVEELARVCGATLTLDSKYFGMTARVTLHGKDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKSVGALANFFRIAP-EEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K + + RLRIGIG P D + + +VL S ++ + +D RS +L ++
Sbjct: 124 KLANDKGFYRLRIGIGHPGDKSQVSNYVLSKASPTDQELMDAAVDEAVRSTEVLFNQDMA 183
Query: 179 SFLNHIVSVR 188
++ + S +
Sbjct: 184 KAMHRLHSFK 193
>gi|319787941|ref|YP_004147416.1| peptidyl-tRNA hydrolase [Pseudoxanthomonas suwonensis 11-1]
gi|317466453|gb|ADV28185.1| peptidyl-tRNA hydrolase [Pseudoxanthomonas suwonensis 11-1]
Length = 193
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 65/188 (34%), Positives = 95/188 (50%), Gaps = 3/188 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ +RHN GF +D + + K E + + G + L+KP
Sbjct: 6 LIVGLGNPGPEHALDRHNAGFRLVDTLAERQGVRFGLESKLFGETARVDIGGQQVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ + LV HD+LDL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSVTAALRFWKIEPEQALLV-HDELDLPPGTARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLRIGIG P ++ VLG + + ID+ LPL+ E
Sbjct: 125 LGHGRFHRLRIGIGHPGHKDRVVGWVLGKPGKDDDILIGRAIDDAIDVLPLVVGGEINEA 184
Query: 181 LNHIVSVR 188
+ + + +
Sbjct: 185 MKRLHTSK 192
>gi|251789668|ref|YP_003004389.1| peptidyl-tRNA hydrolase [Dickeya zeae Ech1591]
gi|247538289|gb|ACT06910.1| peptidyl-tRNA hydrolase [Dickeya zeae Ech1591]
Length = 195
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 100/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +DR+ + P + KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAATRHNAGAWYVDRLAEAYRQPLKEESKFFGYTARLSLAGNDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ + LV HD+LDL G +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVAAMATFYRI-QPDEILVAHDELDLLPGVAKLKLGGGHGGHNGLKDIVS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID R +L K + +
Sbjct: 124 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQTLIDQAIDESLRCTDILMKEDMI 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 KAMNRLHAFK 193
>gi|229546914|ref|ZP_04435639.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1322]
gi|255971756|ref|ZP_05422342.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T1]
gi|257421546|ref|ZP_05598536.1| peptidyl-tRNA hydrolase [Enterococcus faecalis X98]
gi|312952656|ref|ZP_07771520.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0102]
gi|229307842|gb|EEN73829.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX1322]
gi|255962774|gb|EET95250.1| peptidyl-tRNA hydrolase [Enterococcus faecalis T1]
gi|257163370|gb|EEU93330.1| peptidyl-tRNA hydrolase [Enterococcus faecalis X98]
gi|310629444|gb|EFQ12727.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0102]
gi|315147121|gb|EFT91137.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX4244]
gi|315153560|gb|EFT97576.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0031]
gi|315156260|gb|EFU00277.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0043]
gi|315158595|gb|EFU02612.1| peptidyl-tRNA hydrolase [Enterococcus faecalis TX0312]
gi|323479469|gb|ADX78908.1| peptidyl-tRNA hydrolase [Enterococcus faecalis 62]
Length = 188
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y E +HNIGF+ +D I F A+I+E + + +L+K
Sbjct: 1 MKVIVGLGNPGSKYKETKHNIGFITLDEIAYRQNVSFNNSNFEADIAEFFIGTEKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++ ++ + + E+ +VI+DDLDL+ G +RL+ G GHNG+KS+
Sbjct: 61 PLTFMNESGRSVGPLLTYFGV-DEEDLIVIYDDLDLEVGKIRLRQKGSAGGHNGIKSLIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G N + R++IGIGRP +I HVL F +L + A + + V
Sbjct: 120 HLGTNVFPRIKIGIGRPSKNDTVIHHVLSTFPKETHGEMLLAVKKAADAALYACEGHTFV 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 ETMNQFN 186
>gi|53729108|ref|ZP_00134069.2| COG0193: Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126207521|ref|YP_001052746.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae L20]
gi|307244834|ref|ZP_07526933.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|307253788|ref|ZP_07535642.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|307258244|ref|ZP_07539987.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 11
str. 56153]
gi|307260485|ref|ZP_07542179.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 12
str. 1096]
gi|166199299|sp|A3MYA5|PTH_ACTP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|126096313|gb|ABN73141.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
gi|306854279|gb|EFM86485.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|306863272|gb|EFM95212.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|306867704|gb|EFM99549.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 11
str. 56153]
gi|306869797|gb|EFN01580.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 12
str. 1096]
Length = 194
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y + RHN G I+ I ++ KF ++++ G L+
Sbjct: 5 KLIVGLANPGTKYEDTRHNAGEWLINEIARQFNVSLKEEAKFFGKVAKINAAGGEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LV HD+LDL G ++K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALANFYRIKP-EEILVAHDELDLPPGVAKIKQGGGHGGHNGLKDIIA 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N+ R+RIGIG P + +VLG S ++ + +D R + LL K
Sbjct: 124 SLGNSNNFYRVRIGIGHPGSKELVAGYVLGKPSPQDQEKINAAVDEAGRCVDLLLKDGIT 183
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 184 KATNRLNAFK 193
>gi|313900957|ref|ZP_07834447.1| aminoacyl-tRNA hydrolase [Clostridium sp. HGF2]
gi|312954377|gb|EFR36055.1| aminoacyl-tRNA hydrolase [Clostridium sp. HGF2]
Length = 186
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF +D I +KKF A I ++ G +L+K
Sbjct: 1 MKLIVGLGNPGKEYEMTRHNSGFCVLDAIAEECRVDVTQKKFKALIENTRISGEAVVLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+++ M+FYKL + ++ LVI+DDLDL G +RL+ G G NG+K+I
Sbjct: 61 PQTFMNLSGEAVRAAMDFYKL-SAQDLLVIYDDLDLPVGKIRLRAQGSAGGQNGMKNIIR 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+GIG+ +I VLG E ++ + +
Sbjct: 120 HIGTQEFDRIRVGIGKDA-RIPVIDWVLGKIRREELEDYRQAVELARDAAIYSCSHSFMD 178
Query: 180 FLNHIV 185
++H
Sbjct: 179 TMSHFN 184
>gi|293364520|ref|ZP_06611245.1| aminoacyl-tRNA hydrolase [Streptococcus oralis ATCC 35037]
gi|307702810|ref|ZP_07639760.1| peptidyl-tRNA hydrolase [Streptococcus oralis ATCC 35037]
gi|291317028|gb|EFE57456.1| aminoacyl-tRNA hydrolase [Streptococcus oralis ATCC 35037]
gi|307623666|gb|EFO02653.1| peptidyl-tRNA hydrolase [Streptococcus oralis ATCC 35037]
Length = 189
Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ +G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFFNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + R++IGIGRP ++ HVL F + +L ID + ++ L ++
Sbjct: 122 HIGTQIFNRVKIGIGRPKKGMSVVHHVLSKFDQDDYVGILQSIDKVDDAVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|157962951|ref|YP_001502985.1| peptidyl-tRNA hydrolase [Shewanella pealeana ATCC 700345]
gi|157847951|gb|ABV88450.1| Aminoacyl-tRNA hydrolase [Shewanella pealeana ATCC 700345]
Length = 208
Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y RHN G ++ + K+ + L G L+
Sbjct: 19 KLIVGLANPGAQYERTRHNAGAWYVEELARVCGATLTLDSKYFGMTARVTLHGKDVRLLI 78
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 79 PTTFMNLSGKSVGALANFFRIAP-EEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIA 137
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K + + RLRIGIG P D + + +VL S ++ + ID RS +L ++
Sbjct: 138 KLANDKGFYRLRIGIGHPGDKSQVSNYVLSKASPTDQELMDAAIDEAVRSTEVLFNQDMA 197
Query: 179 SFLNHIVSVR 188
++ + S +
Sbjct: 198 KAMHRLHSFK 207
>gi|262404529|ref|ZP_06081084.1| peptidyl-tRNA hydrolase [Vibrio sp. RC586]
gi|262349561|gb|EEY98699.1| peptidyl-tRNA hydrolase [Vibrio sp. RC586]
Length = 196
Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + H + KF ++G ++
Sbjct: 6 KLLVGLANPGPEYAKTRHNAGAWVVEELARIHNVTLKNEPKFFGLTGRMLINGQELRVLV 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E +V HD+LDL G + K GGG GHNGLK
Sbjct: 66 PTTFMNLSGKAIAALANFYQIKP-EEIMVAHDELDLPPGIAKFKQGGGHGGHNGLKDTIS 124
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P ++ +VLG + E+ L +D R L +L K
Sbjct: 125 KLGNNKEFYRLRLGIGHPGHKDNVAGYVLGKAPTKEQECLDAAVDESVRCLEILMKDGLT 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|28199876|ref|NP_780190.1| peptidyl-tRNA hydrolase [Xylella fastidiosa Temecula1]
gi|182682628|ref|YP_001830788.1| peptidyl-tRNA hydrolase [Xylella fastidiosa M23]
gi|32129853|sp|Q87A24|PTH_XYLFT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238691122|sp|B2IA78|PTH_XYLF2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|28057997|gb|AAO29839.1| peptidyl tRNA hydrolase [Xylella fastidiosa Temecula1]
gi|182632738|gb|ACB93514.1| Aminoacyl-tRNA hydrolase [Xylella fastidiosa M23]
gi|307578908|gb|ADN62877.1| peptidyl-tRNA hydrolase [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 192
Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF +D + A + K A ++ + G L++P
Sbjct: 6 LIVGLGNPGSEYIKTRHNAGFRFVDGLVQREGQCWALESKLFAYVARVFIAGQWVWLLRP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ +NF+K+ E LV HD+LD G +RLK GG G NGL+ I++
Sbjct: 66 VTFMNLSGKSICAGLNFWKIKP-EQMLVAHDELDFPPGAVRLKFDGGHGGQNGLRDITKL 124
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG + E + ++ + LPL +
Sbjct: 125 LGHGRFHRLRVGIGHPGHKDRVVSWVLGCPTCDENIAIDAALERASVVLPLAVAGDFDGA 184
Query: 181 LNHIVSV 187
+ + +V
Sbjct: 185 MKKLHTV 191
>gi|294101747|ref|YP_003553605.1| peptidyl-tRNA hydrolase [Aminobacterium colombiense DSM 12261]
gi|293616727|gb|ADE56881.1| peptidyl-tRNA hydrolase [Aminobacterium colombiense DSM 12261]
Length = 196
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 3/191 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEI-SEGQLDGLRTILI 59
M ++ GLGNPG EY RHNIG+M +DR+ S + +F + + G + +L+
Sbjct: 1 MRLIVGLGNPGVEYALTRHNIGWMVLDRLCSRYSAGNASLRFEGMVWGPLFIKGEKCLLL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG+S+ +V ++Y++ E LVI DD L FG LRL+T G GHNGL S+
Sbjct: 61 KPLTFMNLSGRSVAQVCHYYQILP-EETLVISDDAALPFGQLRLRTKGSAGGHNGLASVL 119
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
RLR+G+G P ++ V+G F ER L +I+ A ++ L E
Sbjct: 120 GALRTLGVPRLRVGVGAAPAERDMVSWVIGTFLPEERSLLPDVIEKAANAVELWLMEEIQ 179
Query: 179 SFLNHIVSVRK 189
+ ++ I + K
Sbjct: 180 TAMSQINNRDK 190
>gi|260767758|ref|ZP_05876693.1| peptidyl-tRNA hydrolase [Vibrio furnissii CIP 102972]
gi|260617267|gb|EEX42451.1| peptidyl-tRNA hydrolase [Vibrio furnissii CIP 102972]
Length = 196
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + H + KF ++G L+
Sbjct: 6 KLLVGLANPGPEYAKTRHNAGAWVVEELARIHNVVLKNEPKFFGLTGRIMVNGDDLRLLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ N E ++ HD+LDL G + K GGG GHNGLK
Sbjct: 66 PTTFMNLSGKAVGALAKFYQI-NPEEIMIAHDELDLPPGVAKFKKGGGHGGHNGLKDTIS 124
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P + +VLG + E+ L ++D R L +L K
Sbjct: 125 KLGNNKEFYRLRIGIGHPGHKDKVAGYVLGKAPAKEQECLDAVVDESVRCLDILFKDGLT 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|117919460|ref|YP_868652.1| peptidyl-tRNA hydrolase [Shewanella sp. ANA-3]
gi|166229454|sp|A0KTX7|PTH_SHESA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|117611792|gb|ABK47246.1| peptidyl-tRNA hydrolase [Shewanella sp. ANA-3]
Length = 195
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + K+ + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVEELARICGVSLVPDSKYFGLTARAVLHGKDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 65 PTTYMNLSGKAVGALANFFRITP-EEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K + + RLRIGIG P D + +VLG + E+ + +D RS +L K + V
Sbjct: 124 KLANDKNFYRLRIGIGHPGDKNKVSGYVLGKAPAKEQELINAAVDEAVRSTEVLFKEDMV 183
Query: 179 SFLNHIVSVR 188
+ + S +
Sbjct: 184 KAMTRLHSFK 193
>gi|331265443|ref|YP_004325073.1| peptidyl-tRNA hydrolase [Streptococcus oralis Uo5]
gi|326682115|emb|CBY99731.1| peptidyl-tRNA hydrolase [Streptococcus oralis Uo5]
Length = 189
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 108/187 (57%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ ++G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFINGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + R++IGIGRP ++ HVL F + +L ID + ++ L ++
Sbjct: 122 HIGTQVFNRVKIGIGRPKKGMSVVHHVLSKFDQDDYVGVLQSIDKVDDAVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|327481914|gb|AEA85224.1| peptidyl-tRNA hydrolase [Pseudomonas stutzeri DSM 4166]
Length = 194
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN G + ++R+ + + +K+ + + G L+
Sbjct: 5 KLIVGLGNPGPEYDQTRHNAGALFVERLAAREGVSLSNDRKYFGLVGKFSHQGEDIRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ + F+++P E+ LV HD+LD+ G +LK GGG GHNGL+ I
Sbjct: 65 PTTYMNRSGQAVAALAGFFRIPP-ESILVAHDELDMPPGVAKLKQGGGHGGHNGLRDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G + RLR+GIG P + + +VLG ER L ID +P + +
Sbjct: 124 KLGNQNSFHRLRLGIGHPGHASLVSGYVLGRAPQAEREKLDASIDFALDVVPEILAGDWT 183
Query: 179 SFLNHIVSVR 188
+ + S +
Sbjct: 184 RAMQRLHSQK 193
>gi|254524732|ref|ZP_05136787.1| peptidyl-tRNA hydrolase [Stenotrophomonas sp. SKA14]
gi|219722323|gb|EED40848.1| peptidyl-tRNA hydrolase [Stenotrophomonas sp. SKA14]
Length = 192
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 61/188 (32%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN GF ++ + K E ++ ++ G L+KP
Sbjct: 6 LIVGLGNPGSEHARTRHNAGFHFVEALAEKAGARWNVDSKLFGETAKVEIAGQTVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ F+K+ E L HD+LDL G RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSVTAAQRFWKIEPEETLL-AHDELDLAPGVARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG S + + ID+ +PL + +
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVGWVLGRPSKDDDVLIARAIDDAIDVMPLAVQGDFSEA 184
Query: 181 LNHIVSVR 188
+ + + +
Sbjct: 185 MKRLHTPK 192
>gi|218441393|ref|YP_002379722.1| aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7424]
gi|218174121|gb|ACK72854.1| Aminoacyl-tRNA hydrolase [Cyanothece sp. PCC 7424]
Length = 210
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGL-RTILIK 60
++ GLGNP +Y + RHNIGF +D + + K+F +EG + L+K
Sbjct: 14 LIIGLGNPEEKYEKTRHNIGFEAVDLLAKMWQLSWQQNKRFQGFFTEGTGPNHQKIRLLK 73
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+S+ V+++YKLP +E+ LVI+DD+DL G +RL+ G GHNG+KSI
Sbjct: 74 PLTYMNRSGESVRAVIDWYKLP-VESILVIYDDMDLPLGRIRLRLSGSAGGHNGIKSIIS 132
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +N+ RLRIGIG+ I HVLG FS+ E + ++ + + K
Sbjct: 133 HVGGQNFPRLRIGIGKSNQKKETISHVLGRFSADENQIMSEVLQLVEEATKTSLKEGVEK 192
Query: 180 FLNHIVS 186
++ +
Sbjct: 193 AMSLYNN 199
>gi|206889681|ref|YP_002249252.1| peptidyl-tRNA hydrolase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|226709070|sp|B5YG54|PTH_THEYD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|206741619|gb|ACI20676.1| peptidyl-tRNA hydrolase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 187
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 64/184 (34%), Positives = 107/184 (58%), Gaps = 4/184 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHN+GFM +D + + +K+K I+E +L+ +IK
Sbjct: 1 MIVIVGLGNPGRKYAKTRHNVGFMVVDELARKYG-LVFKEKNDYYITEWRLENKDITIIK 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPN-LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MNLSG ++ +V+N L N E+ +VIHDD+D+ G +++K G GH G++SI
Sbjct: 60 PTTYMNLSGTAVKKVVNEKILKNLPESLIVIHDDVDMPLGKIKIKKNGSSGGHKGVQSII 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G K++ R++IGIG+ P + +VL F+S +R + I S+ ++
Sbjct: 120 DSLGTKDFIRIKIGIGKNP-YQDVSEYVLSPFTSEQRAKIQEKISEAVESIVVIINEGVN 178
Query: 179 SFLN 182
+N
Sbjct: 179 KAMN 182
>gi|257452981|ref|ZP_05618280.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 3_1_5R]
gi|257466639|ref|ZP_05630950.1| peptidyl-tRNA hydrolase [Fusobacterium gonidiaformans ATCC 25563]
gi|315917793|ref|ZP_07914033.1| peptidyl-tRNA hydrolase [Fusobacterium gonidiaformans ATCC 25563]
gi|317059521|ref|ZP_07924006.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 3_1_5R]
gi|313685197|gb|EFS22032.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 3_1_5R]
gi|313691668|gb|EFS28503.1| peptidyl-tRNA hydrolase [Fusobacterium gonidiaformans ATCC 25563]
Length = 186
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 100/186 (53%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHN+GFM ID H K+KF +++ E G + IK
Sbjct: 1 MKLVVGLGNPGKKYEKTRHNVGFMAIDLFLKKHSILGEKEKFLSKVVETNFQGEKVYFIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG ++ EV+ FYK+ + LV++DD DL G LR K G GHNG+KSI
Sbjct: 61 PQTYMNLSGNAIHEVVQFYKIDPVSEILVVYDDKDLPLGKLRYKVKGSSGGHNGMKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDVS 179
G+ + RL+ GIG + ++I V+G+F E L +++ + K
Sbjct: 121 HIGQEFCRLKCGIG--STSGNVIDFVIGDFQKAEESELESMLEIAVEGIEDWLKNINSEK 178
Query: 180 FLNHIV 185
+
Sbjct: 179 MMQKYN 184
>gi|224079329|ref|XP_002305823.1| predicted protein [Populus trichocarpa]
gi|222848787|gb|EEE86334.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats.
Identities = 64/189 (33%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF IDRI + A I G + + +L KP
Sbjct: 50 WLIVGLGNPGTKYHGTRHNVGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAKP 109
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q +MN SG+S+ + YK+P L + L+I+D+++L G LR++ GG HNG+KS+ +
Sbjct: 110 QAYMNFSGESVGPLAAHYKIP-LRHILLIYDEMNLPNGILRVQPKGGHGHHNGVKSVMDH 168
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RL IGIG PP T + +L FS ER + ++ ++ L
Sbjct: 169 LDGCREFPRLCIGIGNPPGTMDMKAFLLQKFSPTEREQIDASLEQGVEAMRTLILGG--- 225
Query: 180 FLNHIVSVR 188
F N I
Sbjct: 226 FTNKITRFN 234
>gi|325689359|gb|EGD31365.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK115]
Length = 189
Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 111/187 (59%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID+I K F A+I+ L+G + +K
Sbjct: 3 KLIVGLGNPGEKYIETKHNVGFMLIDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + +KR++IGIGRP + ++ HVLG F + + +L +D + ++ +
Sbjct: 122 HIGSQEFKRIKIGIGRPKEGMTVVHHVLGKFDTDDYIMILNTLDKVDNAVNYYLQSGNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QAMQKYN 188
>gi|307711220|ref|ZP_07647642.1| peptidyl-tRNA hydrolase [Streptococcus mitis SK321]
gi|307617182|gb|EFN96360.1| peptidyl-tRNA hydrolase [Streptococcus mitis SK321]
Length = 189
Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIEDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + + R++IGIGRP + ++ HVL F + +L ID + S+ L ++
Sbjct: 122 HIGTQTFNRVKIGIGRPKNGMSVVNHVLSTFDKDDYIGILQSIDKVDDSVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|322832992|ref|YP_004213019.1| peptidyl-tRNA hydrolase [Rahnella sp. Y9602]
gi|321168193|gb|ADW73892.1| peptidyl-tRNA hydrolase [Rahnella sp. Y9602]
Length = 191
Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G +D + H + KF + L G L+ P
Sbjct: 1 MIVGLANPGAEYAQTRHNAGAWYVDLLARQHNQQLKEESKFFGYTARLSLAGQDVRLLVP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++L + FY++ E LV HD+LD+ G ++K GGG+ GHNGLK I K
Sbjct: 61 TTFMNLSGKAVLAMAQFYRIEPDE-ILVAHDELDIPPGMAKIKLGGGNGGHNGLKDIQSK 119
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + RLRIGIG P D + ++ VLG + E+ + ID R LL
Sbjct: 120 FGNNPNFYRLRIGIGHPGDKSKVVGFVLGKPPANEQKLIDDAIDESLRCTELLMTEGLEK 179
Query: 180 FLNHIVSVR 188
+ + + +
Sbjct: 180 TMRRLHTFK 188
>gi|296114647|ref|ZP_06833300.1| peptidyl-tRNA hydrolase [Gluconacetobacter hansenii ATCC 23769]
gi|295979003|gb|EFG85728.1| peptidyl-tRNA hydrolase [Gluconacetobacter hansenii ATCC 23769]
Length = 177
Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats.
Identities = 75/172 (43%), Positives = 111/172 (64%), Gaps = 2/172 (1%)
Query: 16 ENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEV 75
NRHN+GFM +DRI H F W+K+F E+SEGQ+ + +L+KP T+MNLSG+S+ +
Sbjct: 3 RNRHNVGFMAVDRIAERHGFAPWRKRFRGEVSEGQIGRHKVMLLKPLTYMNLSGESVQQA 62
Query: 76 MNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-KNYKRLRIGIG 134
FYKL + + HD+LDL G +R+K GGG AGHNGL+S+ G ++Y R+RIGIG
Sbjct: 63 AAFYKL-SADAITAFHDELDLAPGRIRVKRGGGAAGHNGLRSMDRMLGTQDYWRVRIGIG 121
Query: 135 RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVS 186
P + HVLG+FS +R +L P++D ++ + +LA + F+ + S
Sbjct: 122 HPGTRERVTGHVLGDFSRDDRLWLDPMLDALSDTAAILADGQPELFMTRMAS 173
>gi|58427818|gb|AAW76855.1| peptidyl tRNA hydrolase [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 204
Score = 223 bits (570), Expect = 7e-57, Method: Composition-based stats.
Identities = 66/188 (35%), Positives = 94/188 (50%), Gaps = 3/188 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D + A K E ++ + G L+KP
Sbjct: 16 LIVGLGNPGQEHAQTRHNAGFRFVDSLIERSGARWALDSKLFGETAKVDIAGQPVWLLKP 75
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E+ LV HD+LDL GT RLK GG G NGL+
Sbjct: 76 ATFMNLSGKSITAALRFWKIEP-EHLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIGL 134
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG + + ID LPL +
Sbjct: 135 LGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGREDDAAIGTAIDAAIDVLPLAMEGHFSEA 194
Query: 181 LNHIVSVR 188
+ + + R
Sbjct: 195 MKRLHTSR 202
>gi|229846481|ref|ZP_04466589.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 7P49H1]
gi|229810574|gb|EEP46292.1| peptidyl-tRNA hydrolase [Haemophilus influenzae 7P49H1]
Length = 194
Score = 223 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ + KF + + ++G L+
Sbjct: 5 KLIVGLGNPGDKYTDTRHNAGEWLIERLARRFNVSLNPESKFFGKTARTLVNGKEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LVIHD+LDL GT +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALANFYRIKP-EEILVIHDELDLPAGTAKLKQGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGIG P + +VL S + L ++D + ++ + V
Sbjct: 124 QLGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSLADCDALEKVLDEATDCVEMIFRDGMV 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|330813693|ref|YP_004357932.1| peptidyl-tRNA hydrolase [Candidatus Pelagibacter sp. IMCC9063]
gi|327486788|gb|AEA81193.1| peptidyl-tRNA hydrolase [Candidatus Pelagibacter sp. IMCC9063]
Length = 185
Score = 223 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 70/180 (38%), Positives = 108/180 (60%), Gaps = 1/180 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF+ GLGNP ++ NRHNIGF+ ID ++ K KF ++ G+++ + IL+K
Sbjct: 1 MFLFVGLGNPDPKHKNNRHNIGFIIIDSLNKRFNLSKQKPKFKGLLTNGEINNQKLILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + E+ ++YK+ +N V HDDLDL+ G +R K GG GHNG+KSI +
Sbjct: 61 PLTFMNNSGTCIREIQDYYKIIP-KNVFVFHDDLDLEIGKIRCKVGGSSGGHNGIKSIED 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G N+ R+R+GIG P + + HVL +F+ E + + + ++ LL +R+ +F
Sbjct: 120 AIGPNFYRIRVGIGHPGEKKLVDSHVLNDFTDEETEVIDISVQKLLDNVHLLIERDLDNF 179
>gi|290579531|ref|YP_003483923.1| putative peptidyl-tRNA hydrolase [Streptococcus mutans NN2025]
gi|254996430|dbj|BAH87031.1| putative peptidyl-tRNA hydrolase [Streptococcus mutans NN2025]
Length = 189
Score = 223 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 106/187 (56%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM +DRI + K F AE + ++G + IK
Sbjct: 3 KLIVGLGNPGSKYHETKHNVGFMALDRIVKPLNVQFTENKTFKAETAATFINGEKIYFIK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ + +Y L +E+ +VI+DDLD++ G +R + G GHNG+KSI +
Sbjct: 63 PATFMNASGLAVRAFLAYYNL-TVEDLIVIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
+ G + + R++IGIGRP D I+ +VLG F + + +D + +++ L +
Sbjct: 122 EIGTQEFDRIKIGIGRPKDKMTIVNYVLGKFDKEDEITIFNTLDKVDKAVNYYLQTKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QTMQKFN 188
>gi|297626905|ref|YP_003688668.1| Peptidyl-tRNA hydrolase (aminoacyl-tRNA hydrolase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922670|emb|CBL57247.1| Peptidyl-tRNA hydrolase (aminoacyl-tRNA hydrolase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 197
Score = 223 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 107/195 (54%), Gaps = 11/195 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLD-------- 52
++V GLGNPG +Y RHNIGF+ +D + + HAE + ++
Sbjct: 4 WLVVGLGNPGPQYANTRHNIGFLTVDELARRAGERFSASRGMHAETASTRIGPQGIGGPA 63
Query: 53 GLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGH 112
+ +L KP+TFMN SG+++ ++ +F + ++ +V+HD+LDLD G LR+K GGGD GH
Sbjct: 64 PEKLVLAKPRTFMNESGRAVRKLSDFLDIEP-DHIIVVHDELDLDPGRLRIKLGGGDNGH 122
Query: 113 NGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
NGLKSI G ++ R+R+GIGRP +VLG FS ER L +D+ A ++
Sbjct: 123 NGLKSIRAHLGTGDFYRVRLGIGRPQGHRAGADYVLGRFSKAEREELAIEVDDGAEAVIS 182
Query: 172 LAKREDVSFLNHIVS 186
L N +
Sbjct: 183 LINAGLGPTQNRFNN 197
>gi|325676244|ref|ZP_08155923.1| aminoacyl-tRNA hydrolase [Rhodococcus equi ATCC 33707]
gi|325552805|gb|EGD22488.1| aminoacyl-tRNA hydrolase [Rhodococcus equi ATCC 33707]
Length = 192
Score = 223 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 80/184 (43%), Positives = 114/184 (61%), Gaps = 3/184 (1%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
V GLGNPG +Y + RHNIGFM D + + K+ AEI + +L G + IL KP+
Sbjct: 10 VVGLGNPGPQYEKTRHNIGFMVADVLAGRVGGKFSAHKRSGAEIVQTRLVGRQVILAKPR 69
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
++MNLSG ++ + F+ + EN +VIHD+LDLDFGT+RLK GGG+ GHNGL+SIS+
Sbjct: 70 SYMNLSGGAVSGLARFFSVKP-ENIVVIHDELDLDFGTIRLKQGGGEGGHNGLRSISQSL 128
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G K+Y R R+GIGRPP +VL FS+ ER L + + A ++ L+ + +
Sbjct: 129 GTKDYLRTRVGIGRPPGRQDPADYVLKPFSTVERKELDLVCEEAADAVELVLQLGLEAAQ 188
Query: 182 NHIV 185
N +
Sbjct: 189 NRLH 192
>gi|225677075|ref|ZP_03788080.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590897|gb|EEH12119.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 182
Score = 223 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 78/185 (42%), Positives = 120/185 (64%), Gaps = 3/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y HNIGF+ +D I + F + KK I+ G ++ + +LIK
Sbjct: 1 MHLIVGLGNPGSQYELTHHNIGFITVDAICKYWGFQLFSKKADYLITSGIINDNKIMLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +FMN SG + ++ NFYKL +L+N +VIHDD DL+ G +++K GG AGHNGLKSI
Sbjct: 61 PYSFMNNSGIPVAKIRNFYKL-SLDNIVVIHDDADLELGRIKIKKGGSSAGHNGLKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLR G+GRP D + +VL FS+ + + P+++ IA+++ L+ + ++ +F
Sbjct: 120 FIGNDYWRLRFGVGRPEDQRSLADYVLSKFSNFDN--VTPLVEKIAKNIHLMLQGDNTAF 177
Query: 181 LNHIV 185
+N IV
Sbjct: 178 INLIV 182
>gi|157151158|ref|YP_001451366.1| peptidyl-tRNA hydrolase [Streptococcus gordonii str. Challis
substr. CH1]
gi|189038171|sp|A8B006|PTH_STRGC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157075952|gb|ABV10635.1| peptidyl-tRNA hydrolase [Streptococcus gordonii str. Challis
substr. CH1]
Length = 189
Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM +D++ K F +EI+ L+G + IK
Sbjct: 3 KLIVGLGNPGDKYFETKHNVGFMLVDKLCKDLNLKFTVDKIFQSEIASTFLNGEKIYFIK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L +E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-EVEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G +++KR++IGIGRP + ++ HVLG F + +L +D + ++ +
Sbjct: 122 HIGTQDFKRVKIGIGRPKEGMTVVHHVLGKFDRDDYITILNTLDKVDNAVNYYLQSGNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QAMQKYN 188
>gi|162446906|ref|YP_001620038.1| peptidyl-tRNA hydrolase [Acholeplasma laidlawii PG-8A]
gi|189038277|sp|A9NE82|PTH_ACHLI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|161985013|gb|ABX80662.1| peptidyl-tRNA hydrolase [Acholeplasma laidlawii PG-8A]
Length = 191
Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 70/189 (37%), Positives = 111/189 (58%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG +Y + RHNIGF+ ID++ S+ K A ++ +++G I+
Sbjct: 1 MKLIVGLGNPGKQYVQTRHNIGFIAIDKLLSYLNTELKVDSKLQAAYTKTKIEGEDVIIA 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG ++ ++MNFYK+ ++E+ LVI DD L G +R++ G G NGLK I
Sbjct: 61 KPLTYMNLSGDAVTKLMNFYKI-DVEDILVILDDTALPLGKIRIRQTGSHGGQNGLKDII 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS-LPLLAKRED 177
K G K++KRLRIGIG + +VLG FS+ E +LP I+ + + + ++
Sbjct: 120 NKLGTKDFKRLRIGIGEHAH-MDKVDYVLGKFSTNELNTILPTIEYVNDAIIEWISTNNF 178
Query: 178 VSFLNHIVS 186
+ + +
Sbjct: 179 NNIMTKYNT 187
>gi|218767913|ref|YP_002342425.1| peptidyl-tRNA hydrolase [Neisseria meningitidis Z2491]
gi|14195079|sp|Q9JV42|PTH_NEIMA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|121051921|emb|CAM08227.1| putative peptidyl-tRNA hydrolase [Neisseria meningitidis Z2491]
gi|319410161|emb|CBY90497.1| peptidyl-tRNA hydrolase (PTH) [Neisseria meningitidis WUE 2594]
Length = 192
Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG EY + RHN GF +D + +KKF E++ L L+K
Sbjct: 6 KMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARATLPDGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PTTFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K G +Y RLR+GIG P D ++ +VL S+ R + + +++P + +
Sbjct: 125 KLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRRQIDDAVAKSLQAIPDILAGKCEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 ATRFLHS 191
>gi|318605421|emb|CBY26919.1| peptidyl-tRNA hydrolase [Yersinia enterocolitica subsp. palearctica
Y11]
Length = 197
Score = 223 bits (569), Expect = 9e-57, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 100/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + L L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGGWYVDLLAQRHNQQLKEESKFFGYTARLNLADQDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG++++ + FY++ E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 65 PSTFMNLSGKAVVAMAGFYRILP-EEILVAHDELDIPPGVAKLKLGGGNGGHNGLKDIQS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + + VLG + E+ + ID R +L K +
Sbjct: 124 KFGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQTLIDDAIDESIRCTEVLLKEDIT 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 RAMNRLHSFK 193
>gi|58696922|ref|ZP_00372423.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Drosophila
simulans]
gi|58698058|ref|ZP_00372982.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225629936|ref|YP_002726727.1| peptidyl-tRNA hydrolase [Wolbachia sp. wRi]
gi|254783898|sp|C0R594|PTH_WOLWR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|58535415|gb|EAL59490.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58536852|gb|EAL60060.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Drosophila
simulans]
gi|225591917|gb|ACN94936.1| peptidyl-tRNA hydrolase [Wolbachia sp. wRi]
Length = 182
Score = 223 bits (569), Expect = 9e-57, Method: Composition-based stats.
Identities = 78/185 (42%), Positives = 120/185 (64%), Gaps = 3/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y HNIGF+ +D I + F + KK I+ G ++ + +LIK
Sbjct: 1 MHLIVGLGNPGSQYELTHHNIGFITVDAICKYWGFQLFSKKADYLITSGMINDNKIMLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +FMN SG + ++ NFYKL +L+N +VIHDD DL+ G +++K GG AGHNGLKSI
Sbjct: 61 PYSFMNNSGIPVAKIRNFYKL-SLDNIVVIHDDADLELGRIKVKKGGSSAGHNGLKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLR G+GRP D + +VL FS+ + + P+++ IA+++ L+ + ++ +F
Sbjct: 120 FIGNDYWRLRFGVGRPEDQRSLADYVLSKFSNFDN--VTPLVEKIAKNIHLMLQGDNTAF 177
Query: 181 LNHIV 185
+N IV
Sbjct: 178 INLIV 182
>gi|84625060|ref|YP_452432.1| peptidyl-tRNA hydrolase [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|122879276|ref|YP_202240.6| peptidyl-tRNA hydrolase [Xanthomonas oryzae pv. oryzae KACC10331]
gi|188575472|ref|YP_001912401.1| peptidyl-tRNA hydrolase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|68052873|sp|Q5GWR6|PTH_XANOR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391037|sp|Q2NZW9|PTH_XANOM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238689541|sp|B2SQP2|PTH_XANOP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|84369000|dbj|BAE70158.1| Peptidyl-tRNA hydrolase [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188519924|gb|ACD57869.1| peptidyl-tRNA hydrolase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 194
Score = 223 bits (569), Expect = 9e-57, Method: Composition-based stats.
Identities = 66/188 (35%), Positives = 94/188 (50%), Gaps = 3/188 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D + A K E ++ + G L+KP
Sbjct: 6 LIVGLGNPGQEHAQTRHNAGFRFVDSLIERSGARWALDSKLFGETAKVDIAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E+ LV HD+LDL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSITAALRFWKIEP-EHLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIGL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG + + ID LPL +
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGREDDAAIGTAIDAAIDVLPLAMEGHFSEA 184
Query: 181 LNHIVSVR 188
+ + + R
Sbjct: 185 MKRLHTSR 192
>gi|71275257|ref|ZP_00651544.1| Peptidyl-tRNA hydrolase [Xylella fastidiosa Dixon]
gi|71902208|ref|ZP_00684220.1| Peptidyl-tRNA hydrolase [Xylella fastidiosa Ann-1]
gi|170731255|ref|YP_001776688.1| peptidyl-tRNA hydrolase [Xylella fastidiosa M12]
gi|238687962|sp|B0U5Y6|PTH_XYLFM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71164066|gb|EAO13781.1| Peptidyl-tRNA hydrolase [Xylella fastidiosa Dixon]
gi|71728034|gb|EAO30245.1| Peptidyl-tRNA hydrolase [Xylella fastidiosa Ann-1]
gi|167966048|gb|ACA13058.1| Aminoacyl-tRNA hydrolase [Xylella fastidiosa M12]
Length = 192
Score = 223 bits (569), Expect = 9e-57, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF +D + A + K A ++ + G L++P
Sbjct: 6 LIVGLGNPGSEYIKTRHNAGFRFVDGLVQREGQCWALESKLFAYVARVFIAGQWVWLLRP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ +NF+K+ E LV HD+LD G +RLK GG G NGL+ I++
Sbjct: 66 VTFMNLSGKSIFAGLNFWKIKP-EQMLVAHDELDFPPGAVRLKFDGGHGGQNGLRDITKL 124
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG + E + ++ + LPL +
Sbjct: 125 LGHGRFHRLRVGIGHPGHKERVVSWVLGCPTCDENIAIDAALERASVVLPLAVAGDFDGA 184
Query: 181 LNHIVSV 187
+ + +V
Sbjct: 185 MKKLHTV 191
>gi|327467733|gb|EGF13227.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK330]
Length = 189
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM +D+I K F A+I+ L+G + +K
Sbjct: 3 KLIVGLGNPGEKYIETKHNVGFMLVDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + +KR++IGIGRP + ++ HVLG F + +L +D + +++ +
Sbjct: 122 HIGIQEFKRIKIGIGRPKEGMTVVHHVLGKFDKDDYIMILNTLDKVDKAVKYYLQSGNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QTMQKYN 188
>gi|293400064|ref|ZP_06644210.1| aminoacyl-tRNA hydrolase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306464|gb|EFE47707.1| aminoacyl-tRNA hydrolase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 186
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 64/186 (34%), Positives = 101/186 (54%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG EY RHN GF +D I +KKF + I ++ G + IL+K
Sbjct: 1 MKLIAGLGNPGKEYENTRHNSGFCVMDAIAKELHVDITQKKFKSLICMTRIQGEQVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG++++E + FY + ++++ L+I+DDLDL G +RL+ G G NG+K+I
Sbjct: 61 PQTYMNNSGEAIIEAVKFYHI-DVKDILIIYDDLDLPVGKIRLREKGSAGGQNGMKNIIA 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ +KR+R+GIG+ +I VLG +R I + +
Sbjct: 120 HLHTQEFKRIRVGIGKD-SRVPVIDWVLGKIRKEDREDYEKAIALAKDAAIYSVTHTFMD 178
Query: 180 FLNHIV 185
++H
Sbjct: 179 TMSHFN 184
>gi|195977162|ref|YP_002122406.1| peptidyl-tRNA hydrolase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|238689842|sp|B4U5H3|PTH_STREM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|195973867|gb|ACG61393.1| peptidyl-tRNA hydrolase Pth [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 189
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 58/187 (31%), Positives = 103/187 (55%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HN+GFM +DR+ + K F A + ++ + +K
Sbjct: 3 KMIVGLGNPGSKYQQTKHNVGFMAVDRLVKDLDISFTEDKAFKALVGSAFINQEKIYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + + ++ +VI+DDLD+ G +RL+ G GHNG+KSI
Sbjct: 63 PTTFMNNSGLAVRALLTYYNI-STKDLMVIYDDLDMAVGKIRLRQKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G + + R++IGIGRP +I HVLG F + + + +D + +++ + +
Sbjct: 122 HIGTQEFDRVKIGIGRPSHGMSVINHVLGKFDTDDMITINIALDKVDKAINYYLQEKSIE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQQFN 188
>gi|119775704|ref|YP_928444.1| peptidyl-tRNA hydrolase [Shewanella amazonensis SB2B]
gi|166229449|sp|A1S8R8|PTH_SHEAM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119768204|gb|ABM00775.1| peptidyl-tRNA hydrolase [Shewanella amazonensis SB2B]
Length = 195
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + K+ + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVEELARIANVSLAPDPKYFGLTARAILCGKDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + NF+++ E LV HD+LD++ G R K GGG GHNGLK I
Sbjct: 65 PSTFMNLSGKSVAALANFFRIEP-EQILVAHDELDMEPGVARFKLGGGHGGHNGLKDIIA 123
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G KN+ RLRIGIG P D + +VLG + E+ + ID RS +L K++
Sbjct: 124 KMGNNKNFYRLRIGIGHPGDKNKVSGYVLGKAPATEQEKMNAAIDEAVRSTEILFKQDMT 183
Query: 179 SFLNHIVSVR 188
++ + S +
Sbjct: 184 KAMHRLHSFK 193
>gi|114569307|ref|YP_755987.1| peptidyl-tRNA hydrolase [Maricaulis maris MCS10]
gi|114339769|gb|ABI65049.1| peptidyl-tRNA hydrolase [Maricaulis maris MCS10]
Length = 220
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 76/185 (41%), Positives = 112/185 (60%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGN +Y NRHN+GFM +D I W+K+F SE + + +L+K
Sbjct: 21 MKILAGLGNYEPKYLRNRHNVGFMALDIIAQAWNAGPWRKRFQGLASEVTIGSNKLLLLK 80
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTF N +G S+ FY++ E+ +V HD+LDL G R+K GGG AG+NG+KSI+
Sbjct: 81 PQTFYNNAGNSVGAAAAFYRVKP-EDIIVFHDELDLAPGKFRMKMGGGAAGNNGIKSITS 139
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ G +++R RIGIG P D + +VL +F+ E +L+ ++D IA SL LLA + +F
Sbjct: 140 QLGPDFRRARIGIGHPGDRNRVTGYVLSDFAKAEEAWLIDLLDAIAGSLDLLAAGDYDAF 199
Query: 181 LNHIV 185
+
Sbjct: 200 QTKVT 204
>gi|156973544|ref|YP_001444451.1| peptidyl-tRNA hydrolase [Vibrio harveyi ATCC BAA-1116]
gi|166229465|sp|A7MY77|PTH_VIBHB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|156525138|gb|ABU70224.1| hypothetical protein VIBHAR_01245 [Vibrio harveyi ATCC BAA-1116]
Length = 196
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + H + KF ++G L+
Sbjct: 6 KLLVGLANPGPEYAKTRHNAGAWVVEELARVHNVTLKNEPKFFGLTGRIMVNGQDLRLLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E +V HD+LDL G + K GGG GHNGL+
Sbjct: 66 PTTFMNLSGKAIAALAKFYQIKP-EEIMVAHDELDLLPGVAKFKKGGGHGGHNGLRDTIS 124
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G K++ RLRIGIG P + VLG + E+ L D R L +L K
Sbjct: 125 KLGNNKDFYRLRIGIGHPGHKDKVAGFVLGKAPAKEQELLDAAADESVRCLDILIKDGLS 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|270291824|ref|ZP_06198039.1| aminoacyl-tRNA hydrolase [Streptococcus sp. M143]
gi|270279352|gb|EFA25194.1| aminoacyl-tRNA hydrolase [Streptococcus sp. M143]
Length = 189
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ +G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFFNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + R++IGIGRP + ++ HVL F + +L ID + S+ L ++ V
Sbjct: 122 HIGTQVFNRVKIGIGRPKKSMSVVHHVLSKFDQDDYVGILQSIDKVDDSVNYYLQEKNFV 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|212636641|ref|YP_002313166.1| peptidyl-tRNA hydrolase [Shewanella piezotolerans WP3]
gi|212558125|gb|ACJ30579.1| Peptidyl-tRNA hydrolase [Shewanella piezotolerans WP3]
Length = 219
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y RHN G ++ + K+ + L G L+
Sbjct: 30 KLIVGLANPGAQYERTRHNAGAWYVEELARVCGASLTLDSKYFGMTARATLHGKDVRLLI 89
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 90 PTTFMNLSGKSVGALANFFRIAP-EEILVAHDELDMSPGVAKFKLGGGHGGHNGLKDIIA 148
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K + + RLRIGIG P D + +VL S ++ + ID RS +L +
Sbjct: 149 KLANDKGFYRLRIGIGHPGDKNQVSNYVLSKASPTDQELMDAAIDEAVRSTEILFNEDMA 208
Query: 179 SFLNHIVSVR 188
++ + S +
Sbjct: 209 KAMHRLHSFK 218
>gi|149007711|ref|ZP_01831320.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP18-BS74]
gi|149020163|ref|ZP_01835137.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP23-BS72]
gi|225860051|ref|YP_002741560.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae Taiwan19F-14]
gi|298229484|ref|ZP_06963165.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255134|ref|ZP_06978720.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298501795|ref|YP_003723735.1| aminoacyl-tRNA hydrolase [Streptococcus pneumoniae TCH8431/19A]
gi|307126179|ref|YP_003878210.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae 670-6B]
gi|254783894|sp|C1CNN8|PTH_STRZT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|147760706|gb|EDK67678.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP18-BS74]
gi|147930841|gb|EDK81822.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP23-BS72]
gi|225727390|gb|ACO23241.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae Taiwan19F-14]
gi|298237390|gb|ADI68521.1| aminoacyl-tRNA hydrolase [Streptococcus pneumoniae TCH8431/19A]
gi|306483241|gb|ADM90110.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae 670-6B]
gi|327388990|gb|EGE87338.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae GA04375]
gi|332071327|gb|EGI81822.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae GA17545]
Length = 189
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++++ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + R++IGIGRP + ++ HVL F E +L +D + S+ L ++
Sbjct: 122 HIGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDRDEYIGILQSVDKVDDSVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|78185646|ref|YP_378080.1| peptidyl-tRNA hydrolase [Synechococcus sp. CC9902]
gi|119391028|sp|Q3AUQ0|PTH_SYNS9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78169940|gb|ABB27037.1| peptidyl-tRNA hydrolase [Synechococcus sp. CC9902]
Length = 206
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 69/193 (35%), Positives = 100/193 (51%), Gaps = 8/193 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHNIGFM ++R+ F ++ K H ++ R L+ P
Sbjct: 8 LVVGLGNPGSKYDGTRHNIGFMALERLARREGFSFRQQAKLHGLSADKGFGDQRLRLLMP 67
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+S+ +++Y E +++ DD+DL G LRL+ G GHNGL+S +
Sbjct: 68 QTFMNDSGRSVRAALDWYGF-QPEEIVLLVDDMDLPLGRLRLRAQGSAGGHNGLRSTIQH 126
Query: 122 CGKN-YKRLRIGIGRPPD-----TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G + RLRIGIG P + A + HVLG FS E+ + ++D + L L +
Sbjct: 127 LGTQVFPRLRIGIGAPAENPAERRARTVSHVLGPFSRAEQPCVDAVLDAVLDGLDRLKTQ 186
Query: 176 EDVSFLNHIVSVR 188
I R
Sbjct: 187 GMERAGTWINGFR 199
>gi|120597881|ref|YP_962455.1| peptidyl-tRNA hydrolase [Shewanella sp. W3-18-1]
gi|120557974|gb|ABM23901.1| peptidyl-tRNA hydrolase [Shewanella sp. W3-18-1]
gi|319427324|gb|ADV55398.1| peptidyl-tRNA hydrolase [Shewanella putrefaciens 200]
Length = 208
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G + + K+ + L G L+
Sbjct: 18 KLIVGLANPGAEYAQTRHNAGAWYVQELARICGVTLVPDSKYFGLTARAVLQGKDVRLLI 77
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 78 PTTYMNLSGKAVGALANFFRITP-EEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIA 136
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K + + RLRIGIG P D + +VLG + E+ + ID RS +L K V
Sbjct: 137 KLANDKNFYRLRIGIGHPGDKNQVSGYVLGKAPAKEQELIEAAIDEAVRSTEILYKENMV 196
Query: 179 SFLNHIVSVR 188
+ + S +
Sbjct: 197 KAMTRLHSFK 206
>gi|126175458|ref|YP_001051607.1| peptidyl-tRNA hydrolase [Shewanella baltica OS155]
gi|153001809|ref|YP_001367490.1| peptidyl-tRNA hydrolase [Shewanella baltica OS185]
gi|160876542|ref|YP_001555858.1| peptidyl-tRNA hydrolase [Shewanella baltica OS195]
gi|217972296|ref|YP_002357047.1| peptidyl-tRNA hydrolase [Shewanella baltica OS223]
gi|304410285|ref|ZP_07391904.1| peptidyl-tRNA hydrolase [Shewanella baltica OS183]
gi|307302004|ref|ZP_07581762.1| peptidyl-tRNA hydrolase [Shewanella baltica BA175]
gi|166229450|sp|A3D7M5|PTH_SHEB5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229451|sp|A6WRI8|PTH_SHEB8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038164|sp|A9KZZ0|PTH_SHEB9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783886|sp|B8E6L3|PTH_SHEB2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|125998663|gb|ABN62738.1| peptidyl-tRNA hydrolase [Shewanella baltica OS155]
gi|151366427|gb|ABS09427.1| Aminoacyl-tRNA hydrolase [Shewanella baltica OS185]
gi|160862064|gb|ABX50598.1| Aminoacyl-tRNA hydrolase [Shewanella baltica OS195]
gi|217497431|gb|ACK45624.1| Aminoacyl-tRNA hydrolase [Shewanella baltica OS223]
gi|304351694|gb|EFM16093.1| peptidyl-tRNA hydrolase [Shewanella baltica OS183]
gi|306914042|gb|EFN44463.1| peptidyl-tRNA hydrolase [Shewanella baltica BA175]
gi|315268736|gb|ADT95589.1| peptidyl-tRNA hydrolase [Shewanella baltica OS678]
Length = 195
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G + + K+ + L G L+
Sbjct: 5 KLIVGLANPGAEYAHTRHNAGAWYVLELARICGVTLVADSKYFGLTARAVLHGKDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + NF+++ E LV HD+LDL G + K GGG GHNGLK I
Sbjct: 65 PTTYMNLSGKAVGALANFFRITP-EEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K + + RLR+GIG P D + +VLG + E+ + ID RS +L K++ V
Sbjct: 124 KLANDKNFYRLRLGIGHPGDKNQVSGYVLGKAPAKEQELIDAAIDEAVRSTEILFKQDMV 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|306828592|ref|ZP_07461786.1| aminoacyl-tRNA hydrolase [Streptococcus mitis ATCC 6249]
gi|304429200|gb|EFM32286.1| aminoacyl-tRNA hydrolase [Streptococcus mitis ATCC 6249]
Length = 189
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 108/187 (57%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAIHALLTYYGL-DIEDLLVIYDDLDMEIGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + R++IGIGRP ++ HVL F + +L ID + ++ L ++
Sbjct: 122 HIGTQVFNRIKIGIGRPKKGMSVVHHVLSKFDQDDYVGILQSIDKVDDAVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|119944670|ref|YP_942350.1| aminoacyl-tRNA hydrolase [Psychromonas ingrahamii 37]
gi|166229440|sp|A1STD6|PTH_PSYIN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119863274|gb|ABM02751.1| peptidyl-tRNA hydrolase [Psychromonas ingrahamii 37]
Length = 197
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 100/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G + ++ S + KF+ Q G L+
Sbjct: 6 KLLVGLANPGPEYAQTRHNAGQWYVSQLASQENIQLKAEPKFYGLTGRIQFAGNDLRLLV 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E L+ HD+LDL G + K GGG GHNGLK I +
Sbjct: 66 PTTFMNLSGKAVAAMANFYRIKP-EEILIAHDELDLLPGIAKFKLGGGHGGHNGLKDIIQ 124
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G + + RLRIGIG P D + +VLG S E+ + ID AR +L +
Sbjct: 125 KLGNDKNFYRLRIGIGHPGDKNRVSGYVLGKAPSSEQNLIDQSIDEAARCTHILGQDGLE 184
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 185 KAMNRLHSFK 194
>gi|223041598|ref|ZP_03611797.1| peptidyl-tRNA hydrolase [Actinobacillus minor 202]
gi|223017573|gb|EEF15985.1| peptidyl-tRNA hydrolase [Actinobacillus minor 202]
Length = 194
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y E RHN G ++ + F+ + K+ ++++ L+
Sbjct: 5 KLIVGLANPGAKYEETRHNAGEWLVNELARMFNATLKDEAKYFGKVAKINTPQGEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LV HD+LDL G ++K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALANFYRIKP-EEILVAHDELDLPPGVAKIKQGGGHGGHNGLKDIIA 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N+ R+RIGIG P + +VLG S ++ + +D +R + LL K V
Sbjct: 124 ALGNSNNFYRVRIGIGHPGHKDLVASYVLGKPSPTDQPLINAAVDEASRCVELLFKEGIV 183
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 184 KATNRLNAFK 193
>gi|146293947|ref|YP_001184371.1| peptidyl-tRNA hydrolase [Shewanella putrefaciens CN-32]
gi|166229453|sp|A4Y9D9|PTH_SHEPC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145565637|gb|ABP76572.1| peptidyl-tRNA hydrolase [Shewanella putrefaciens CN-32]
Length = 195
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G + + K+ + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVQELARICGVTLVPDSKYFGLTARAVLQGKDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 65 PTTYMNLSGKAVGALANFFRITP-EEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K + + RLRIGIG P D + +VLG + E+ + ID RS +L K V
Sbjct: 124 KLANDKNFYRLRIGIGHPGDKNQVSGYVLGKAPAKEQELIEAAIDEAVRSTEILYKENMV 183
Query: 179 SFLNHIVSVR 188
+ + S +
Sbjct: 184 KAMTRLHSFK 193
>gi|127513848|ref|YP_001095045.1| peptidyl-tRNA hydrolase [Shewanella loihica PV-4]
gi|166229452|sp|A3QH38|PTH_SHELP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|126639143|gb|ABO24786.1| peptidyl-tRNA hydrolase [Shewanella loihica PV-4]
Length = 195
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y + RHN G ++ + K++ + L G L+
Sbjct: 5 KLIVGLANPGDKYEQTRHNAGAWYVNELARVCGVSLVADSKYYGLTARATLYGKDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKSVGALANFFRIAPDE-ILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K + + RLRIGIG P D + + +VLG E+ + +ID R+ +L K +
Sbjct: 124 KLANDKGFYRLRIGIGHPGDKSMVSNYVLGKAPQTEQRLIEEVIDEAVRATEVLFKEDMS 183
Query: 179 SFLNHIVSVR 188
++ + S +
Sbjct: 184 KAMHRLHSYK 193
>gi|322513907|ref|ZP_08066984.1| aminoacyl-tRNA hydrolase [Actinobacillus ureae ATCC 25976]
gi|322120242|gb|EFX92195.1| aminoacyl-tRNA hydrolase [Actinobacillus ureae ATCC 25976]
Length = 194
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y + RHN G I+ I ++ KF ++++ G L+
Sbjct: 5 KLIVGLANPGAKYEDTRHNAGEWLINEIARQFNVSLKEEAKFFGKVAKINAAGGEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LV HD+LDL G ++K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAIGALANFYRIKP-EEILVAHDELDLPPGAAKIKQGGGHGGHNGLKDIIA 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N+ R+RIGIG P + +VLG S ++ + +D +R + +L K
Sbjct: 124 CLGNSNNFYRVRIGIGHPGSKELVAGYVLGKPSPQDQEKINAAVDEASRCVDVLFKDGMT 183
Query: 179 SFLNHIVSVR 188
N + +
Sbjct: 184 KATNRLNGFK 193
>gi|312138687|ref|YP_004006023.1| aminoacyl-tRNA hydrolase pth [Rhodococcus equi 103S]
gi|311888026|emb|CBH47338.1| aminoacyl-tRNA hydrolase Pth [Rhodococcus equi 103S]
Length = 192
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 80/184 (43%), Positives = 114/184 (61%), Gaps = 3/184 (1%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
V GLGNPG +Y + RHNIGFM D + + K+ AEI + +L G + IL KP+
Sbjct: 10 VVGLGNPGPQYEKTRHNIGFMVADVLAGRVGGKFSAHKRSGAEIVQTRLVGRQVILAKPR 69
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
++MNLSG ++ + F+ + EN +VIHD+LDLDFGT+RLK GGG+ GHNGL+SIS+
Sbjct: 70 SYMNLSGGAVSGLARFFSVKP-ENIVVIHDELDLDFGTIRLKQGGGEGGHNGLRSISQSL 128
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G K+Y R R+GIGRPP +VL FS+ ER L + + A ++ L+ + +
Sbjct: 129 GTKDYLRTRVGIGRPPGRQDPADYVLKPFSTVERKELDLVCEEAADAVELVLQLGLEAAQ 188
Query: 182 NHIV 185
N +
Sbjct: 189 NRLH 192
>gi|261392838|emb|CAX50419.1| peptidyl-tRNA hydrolase (PTH) [Neisseria meningitidis 8013]
gi|325127928|gb|EGC50831.1| peptidyl-tRNA hydrolase [Neisseria meningitidis N1568]
gi|325144168|gb|EGC66475.1| peptidyl-tRNA hydrolase [Neisseria meningitidis M01-240013]
Length = 192
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG EY + RHN GF +D + +KKF E++ L L+K
Sbjct: 6 KMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARATLPDGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PTTFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLR+GI P D ++ +VL S+ R + I +++P + +
Sbjct: 125 RLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSAEHRQQIDDAIAKSLQAIPDIISGKWEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 ATRFLHS 191
>gi|254670621|emb|CBA06610.1| Peptidyl-tRNA hydrolase [Neisseria meningitidis alpha153]
gi|325142048|gb|EGC64478.1| peptidyl-tRNA hydrolase [Neisseria meningitidis 961-5945]
gi|325198013|gb|ADY93469.1| peptidyl-tRNA hydrolase [Neisseria meningitidis G2136]
Length = 192
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG EY + RHN GF +D + +KKF E++ L L+K
Sbjct: 6 KMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARATLPDGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PTTFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLR+GIG P D ++ +VL S+ R + + +++P + +
Sbjct: 125 RLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRRQIDDAVAKSLQAIPDILAGKWEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 ATRFLHS 191
>gi|125716893|ref|YP_001034026.1| peptidyl-tRNA hydrolase [Streptococcus sanguinis SK36]
gi|166229460|sp|A3CJX1|PTH_STRSV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|125496810|gb|ABN43476.1| Peptidyl-tRNA hydrolase, putative [Streptococcus sanguinis SK36]
Length = 189
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM +D+I K F A+I+ L+G + +K
Sbjct: 3 KLIVGLGNPGEKYIETKHNVGFMLVDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + +KR++IGIGRP + ++ HVLG F + +L +D + ++ +
Sbjct: 122 HIGSQEFKRIKIGIGRPKEGVTVVHHVLGKFDKDDYTTILNTLDKVDNAVNYYLQSGNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QTMQKYN 188
>gi|119477474|ref|ZP_01617665.1| peptidyl-tRNA hydrolase [marine gamma proteobacterium HTCC2143]
gi|119449400|gb|EAW30639.1| peptidyl-tRNA hydrolase [marine gamma proteobacterium HTCC2143]
Length = 212
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 74/190 (38%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY E RHN G + ++ + H + KF Q+D L+
Sbjct: 23 KLIVGLGNPGREYEETRHNAGAIFVNELARQHGCALKIETKFFGVTGRLQIDDDDVRLLI 82
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+P E LV HD+LD+D GT R K GGG GHNGL+ I
Sbjct: 83 PTTFMNRSGQAVAAMCQFYKVP-FEEILVAHDELDIDAGTARFKQGGGHGGHNGLRDIIA 141
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G KN+ RLRIGIG P + +VL + E + IID R+LP K +
Sbjct: 142 RNGNNKNFHRLRIGIGHPGSADKVTGYVLNKAPAAEYRKMEDIIDEAIRALPDAIKGDWS 201
Query: 179 SFLNHIVSVR 188
+N++ + +
Sbjct: 202 KAMNYLHTFK 211
>gi|121997778|ref|YP_001002565.1| peptidyl-tRNA hydrolase [Halorhodospira halophila SL1]
gi|166199335|sp|A1WVQ1|PTH_HALHL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|121589183|gb|ABM61763.1| peptidyl-tRNA hydrolase [Halorhodospira halophila SL1]
Length = 194
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 103/186 (55%), Gaps = 3/186 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++AGLGNPG +Y RHN GF +D + + ++ KF + + +DG L+KP
Sbjct: 10 LIAGLGNPGSKYAGTRHNAGFWLVDELVRRYGGELREEPKFRGDCARVLIDGYDCRLVKP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + NF+K+P E LV HD++DL G++RLK GGG GHNGL+ I
Sbjct: 70 MTYMNHSGQAVGALANFFKIPP-EAILVAHDEIDLPPGSVRLKRGGGHGGHNGLRHIQST 128
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ RLR+G+G P ++ HVL S E L ID+ A +P L E
Sbjct: 129 LGTPDFARLRLGVGHPGHKDQVVPHVLSRPSPDELRQLERAIDDAADQIPRLLAGEWDRA 188
Query: 181 LNHIVS 186
+ +
Sbjct: 189 CQQLHA 194
>gi|206900849|ref|YP_002251219.1| peptidyl-tRNA hydrolase [Dictyoglomus thermophilum H-6-12]
gi|206739952|gb|ACI19010.1| peptidyl-tRNA hydrolase [Dictyoglomus thermophilum H-6-12]
Length = 193
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 74/180 (41%), Positives = 106/180 (58%), Gaps = 2/180 (1%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
+ GLGNPG+EY RHN+GFM +D + F FP +KK I+ G++ L+KPQT
Sbjct: 6 IVGLGNPGYEYANTRHNVGFMVVDYLQEFFKFPPYKKTSSNLITFGRVHNTEVYLVKPQT 65
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
+MNLSG + E + + E LVIHDDLDL GT+R++ G D GHNG+KSI ++
Sbjct: 66 YMNLSGIGVKEFLAKFNFKP-EEVLVIHDDLDLLVGTIRIRFDGKDGGHNGIKSIIKEIN 124
Query: 124 K-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
N+ RLRIGIG+P D ++ +VLGNF E + II + + + + ++ N
Sbjct: 125 TPNFYRLRIGIGKPKDKNQVVEYVLGNFEDEEFTIINKIIQSSPQIVETIIEKGWEVAQN 184
>gi|294789052|ref|ZP_06754292.1| aminoacyl-tRNA hydrolase [Simonsiella muelleri ATCC 29453]
gi|294483154|gb|EFG30841.1| aminoacyl-tRNA hydrolase [Simonsiella muelleri ATCC 29453]
Length = 190
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 104/188 (55%), Gaps = 3/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
++ GLGN G EY RHN GF ID + +KKF +++ + G L+K
Sbjct: 4 KLIVGLGNIGTEYEYTRHNAGFWLIDELAKQWNVSLREEKKFFGDVARARYHGEDIWLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + FYK+ + E LV+HD+LD+ G +R K GGG+ GHNGLK I
Sbjct: 64 PNTYMNLSGKAVGALAQFYKIQSNE-ILVVHDELDIGCGKIRFKLGGGNGGHNGLKDIQA 122
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K G ++ RLR+GIG P D ++ +VL S+ ER + ID +LP + +
Sbjct: 123 KLGTPDFYRLRLGIGHPGDRNLVVSYVLNKPSAAERDLINQSIDKSLNALPNILDGKLDD 182
Query: 180 FLNHIVSV 187
+ + S
Sbjct: 183 AVRFLHSA 190
>gi|163752629|ref|ZP_02159804.1| peptidyl-tRNA hydrolase [Shewanella benthica KT99]
gi|161327482|gb|EDP98693.1| peptidyl-tRNA hydrolase [Shewanella benthica KT99]
Length = 194
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y + RHN G + + K++ + L G L+
Sbjct: 5 KLIVGLANPGEKYAQTRHNAGAWYVQELARICTATLIADSKYYGLTARVNLHGKDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + NF+++ + LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 65 PSTFMNLSGKSVGAMANFFRI-QADEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G + + RLRIGIG P D + + +VLG + E+ + ++D RS LL +
Sbjct: 124 SLGNDKGFYRLRIGIGHPGDRSQVSNYVLGKAPAVEQIQIETVLDEAVRSTELLFTEDMA 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 KAMNRLHTFK 193
>gi|304311480|ref|YP_003811078.1| Peptidyl-tRNA hydrolase [gamma proteobacterium HdN1]
gi|301797213|emb|CBL45433.1| Peptidyl-tRNA hydrolase [gamma proteobacterium HdN1]
Length = 195
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN G ++R+ S P + +F + +DG L+ P
Sbjct: 7 LIVGLGNPGQQYEHTRHNAGAWLVERLASQFRTPLKHEARFSGATARIDIDGHDVRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSGQ++ + +FY++ + +V HD+LDL G ++LKTGGG GHNGL+ I K
Sbjct: 67 STFMNLSGQAVGALASFYRIAP-DAMVVAHDELDLPPGIIKLKTGGGHGGHNGLRDIVAK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + RLRIGIG P + + HVL SS E+ + ID P +A E
Sbjct: 126 LGNNNGFHRLRIGIGHPGSSDRVTGHVLSKASSAEQKLIDAAIDEALAVFPSIAAGELGR 185
Query: 180 FLNHIVSVR 188
+N + + +
Sbjct: 186 AMNRLNAFK 194
>gi|7388025|sp|O85235|PTH_LACSK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|3511016|gb|AAD03811.1| unknown [Lactobacillus sakei]
Length = 177
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 64/168 (38%), Positives = 95/168 (56%), Gaps = 3/168 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HNIGFM ID++ + K F AE + +G +L+K
Sbjct: 1 MKMIVGLGNPGSKYAKTKHNIGFMVIDQLCEKYNVTLNKHDFEAEYGSFKYEGETVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ +M++Y++ ++ LVI DD+DL G LRL+ G GHNG+KSI
Sbjct: 61 PLTFMNDSGRSVGPLMSYYQV-GIDELLVIQDDMDLTMGKLRLRQKGSAGGHNGIKSIIA 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
+ +KRL+IGI P + ++ VL F + ID
Sbjct: 120 HTKSQTFKRLKIGIQHP-QKSTVVNWVLTPFDKDGAPVINQAIDQACE 166
>gi|225024941|ref|ZP_03714133.1| hypothetical protein EIKCOROL_01830 [Eikenella corrodens ATCC
23834]
gi|224942272|gb|EEG23481.1| hypothetical protein EIKCOROL_01830 [Eikenella corrodens ATCC
23834]
Length = 190
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 70/182 (38%), Positives = 102/182 (56%), Gaps = 3/182 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D++ +H +KF + L+K
Sbjct: 4 KLIVGLGNPGPEYEDTRHNAGFWLLDQLAQQWHSHWQDDRKFFGHLIRSTRPSGEIRLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSGQS+ V +FYK+ E LVIHD+LDL+ G ++ K GGG+ GHNGLK I
Sbjct: 64 PQTYMNLSGQSVQAVASFYKIQPQE-ILVIHDELDLEPGRIKFKLGGGNGGHNGLKDIQA 122
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G ++ RLR+GIG P D ++ +VL E+ + ID +LP + + +
Sbjct: 123 RLGSPDFYRLRLGIGHPGDRNEVVNYVLKKPRREEKELIEDAIDKSIATLPDILAGKIEA 182
Query: 180 FL 181
Sbjct: 183 AQ 184
>gi|15839231|ref|NP_299919.1| peptidyl-tRNA hydrolase [Xylella fastidiosa 9a5c]
gi|14195084|sp|Q9PA78|PTH_XYLFA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|9107873|gb|AAF85439.1|AE004071_7 peptidyl tRNA hydrolase [Xylella fastidiosa 9a5c]
Length = 192
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D + + K A ++ + G L++P
Sbjct: 6 LIVGLGNPGSEHTKTRHNAGFRFVDGLVQREGQRWMLESKLFAHVARVFIAGQWVWLLRP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ ++F+K+ E LV HD+LD G +RLK GG G NGL+ I++
Sbjct: 66 VTFMNLSGKSICAGLSFWKIKP-EQMLVAHDELDFPPGAVRLKFDGGHGGQNGLRDITKL 124
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG + E + ++ + LPL+ +
Sbjct: 125 LGHGRFHRLRVGIGHPGHKDRVVNWVLGCPTCEENIAIDAALERASAVLPLVVAGDFDEA 184
Query: 181 LNHIVSV 187
+ + +V
Sbjct: 185 MKKLHTV 191
>gi|116751072|ref|YP_847759.1| peptidyl-tRNA hydrolase [Syntrophobacter fumaroxidans MPOB]
gi|116700136|gb|ABK19324.1| peptidyl-tRNA hydrolase [Syntrophobacter fumaroxidans MPOB]
Length = 201
Score = 222 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 63/183 (34%), Positives = 97/183 (53%), Gaps = 2/183 (1%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
V GLGNPG +Y RHN GFM +DR+ + ++KF A G ++G + +L KP T
Sbjct: 14 VVGLGNPGPQYEHTRHNAGFMVVDRLAAGFGIAMQERKFRASWGTGFVEGRKVLLAKPLT 73
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
+MNLSG ++ E++ ++ P+ E LV+HDDLDL G +RL GG GH G+ SI
Sbjct: 74 YMNLSGAAVGEILKYFGFPS-ERVLVVHDDLDLPCGRVRLARKGGAGGHKGIASIMAHLN 132
Query: 124 -KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
+++ RL++GIGRP + +VL + + +I + + S +N
Sbjct: 133 TRDFPRLKLGIGRPLHGEPVESYVLQPPYAEDARKFEDMILLGEEVVRSVLAAGLSSSMN 192
Query: 183 HIV 185
Sbjct: 193 DYN 195
>gi|303238043|ref|ZP_07324584.1| putative peptidyl-tRNA hydrolase [Prevotella disiens FB035-09AN]
gi|302481739|gb|EFL44793.1| putative peptidyl-tRNA hydrolase [Prevotella disiens FB035-09AN]
Length = 190
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 68/188 (36%), Positives = 95/188 (50%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GFM +D ++ K + I+E L G + IL+KP
Sbjct: 4 YLICGLGNPGREYEGTRHNTGFMVLDAFAKASNI-VFEDKRYGFIAETMLKGRKIILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ + K+ + LVI D+L L G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLEKEKI-DERRLLVISDELALPLGAFRLKANGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G+NY RLR+GIG + VLG ++ + L P ID + A +
Sbjct: 122 IGQNYARLRMGIGNDYPKGGQVDWVLGKYTEEDMKTLQPSIDTAVEIIKSFALAGINITM 181
Query: 182 NHIVSVRK 189
N + K
Sbjct: 182 NQFNKLGK 189
>gi|42520075|ref|NP_965990.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|68052975|sp|Q73II8|PTH_WOLPM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|42409812|gb|AAS13924.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 182
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 79/185 (42%), Positives = 121/185 (65%), Gaps = 3/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y HNIGF+ +D I + F ++ KK I+ G ++ + +LIK
Sbjct: 1 MHLIVGLGNPGSQYELTHHNIGFIVVDTICKYWNFHSFSKKADYLITSGIINDNKIMLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +FMN SG + ++ NFYKL +L+N +VIHDD DL+ G +++K GG AGHNGLKSI
Sbjct: 61 PYSFMNNSGIPVAKIQNFYKL-SLDNIVVIHDDADLELGRIKVKKGGSSAGHNGLKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLR G+GRP D + +VL FS+ Y + P+++ IA+++ L+ + ++ +F
Sbjct: 120 FIGNDYWRLRFGVGRPEDQRSLADYVLSKFSN--FYNVTPLVEKIAKNIHLMLQGDNTAF 177
Query: 181 LNHIV 185
+N IV
Sbjct: 178 INLIV 182
>gi|24372767|ref|NP_716809.1| peptidyl-tRNA hydrolase [Shewanella oneidensis MR-1]
gi|38503270|sp|Q8EHN5|PTH_SHEON RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|24346845|gb|AAN54254.1|AE015562_4 peptidyl-tRNA hydrolase [Shewanella oneidensis MR-1]
Length = 195
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + K+ + L G L+
Sbjct: 5 KLIVGLANPGAEYVQTRHNAGAWYVEELARICGVSLVADSKYFGLTARAVLHGKDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 65 PTTYMNLSGKAVGALANFFRITP-EEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K + + RLRIGIG P D + +VLG + E+ + +D RS +L K + V
Sbjct: 124 KLANDKNFYRLRIGIGHPGDKNKVSGYVLGKAPAKEQELINAAVDEAVRSTEILFKEDMV 183
Query: 179 SFLNHIVSVR 188
+ + S +
Sbjct: 184 KAMTRLHSFK 193
>gi|209694367|ref|YP_002262295.1| peptidyl-tRNA hydrolase [Aliivibrio salmonicida LFI1238]
gi|226694246|sp|B6EHH0|PTH_ALISL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|208008318|emb|CAQ78470.1| peptidyl-tRNA hydrolase [Aliivibrio salmonicida LFI1238]
Length = 196
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G ++ + H P ++ KF Q +G L+
Sbjct: 6 KLLVGLANPGLEYKRTRHNAGAWVVEELARIHNIPMREEAKFFGLTGRIQTNGQDLRLLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E LV HD+LDL G + K GGG GHNGL+
Sbjct: 66 PTTFMNLSGKAIASIAKFYQIKP-EEILVAHDELDLPPGVAKFKKGGGHGGHNGLRDTIS 124
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K K + RLRIGIG P + VLG + E+ + +D R L +L K
Sbjct: 125 KLANTKEFYRLRIGIGHPGHKDKVAGFVLGKAPTKEQELIDAAVDESTRCLDILLKDGLS 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|325695765|gb|EGD37664.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK150]
Length = 189
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM +D+I K F A+I+ L+G + +K
Sbjct: 3 KLIVGLGNPGEKYIETKHNVGFMLVDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + +KR++IGIGRP + ++ HVLG F + +L +D + ++ +
Sbjct: 122 HIGSQEFKRIKIGIGRPKEGMTVVHHVLGKFDKDDYIMILNTLDKVDNAVNYYLQSGNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QTMQKYN 188
>gi|307707903|ref|ZP_07644378.1| peptidyl-tRNA hydrolase [Streptococcus mitis NCTC 12261]
gi|307615968|gb|EFN95166.1| peptidyl-tRNA hydrolase [Streptococcus mitis NCTC 12261]
Length = 189
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIEDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + + R++IGIGRP + ++ HVL F + +L ID + S+ L ++
Sbjct: 122 HIGTQTFNRVKIGIGRPKNGMSVVHHVLSTFDKDDYIGILQSIDKVDDSVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|223933456|ref|ZP_03625441.1| Aminoacyl-tRNA hydrolase [Streptococcus suis 89/1591]
gi|302023114|ref|ZP_07248325.1| peptidyl-tRNA hydrolase [Streptococcus suis 05HAS68]
gi|330831856|ref|YP_004400681.1| peptidyl-tRNA hydrolase [Streptococcus suis ST3]
gi|223897894|gb|EEF64270.1| Aminoacyl-tRNA hydrolase [Streptococcus suis 89/1591]
gi|329306079|gb|AEB80495.1| peptidyl-tRNA hydrolase [Streptococcus suis ST3]
Length = 189
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 64/179 (35%), Positives = 104/179 (58%), Gaps = 3/179 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y E +HN+GFM +D+I K F A+I +DG + L+KP
Sbjct: 4 LIIGLGNPGDRYFETKHNVGFMLLDKIAKRENVTFNHDKIFQADIGTTFIDGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ +M +Y L + + LV +DDLD+ G +R + G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALMAYYGL-DATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R++IGIGRP ++ HVL F + +R + +D + +++ + + +D
Sbjct: 123 IGTQEFDRIKIGIGRPKGKMSVVNHVLSGFDTEDRIEIDLALDKLDKAVNVYLEEDDFD 181
>gi|166363429|ref|YP_001655702.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa NIES-843]
gi|166085802|dbj|BAG00510.1| peptidyl-tRNA hydrolase [Microcystis aeruginosa NIES-843]
Length = 208
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 72/187 (38%), Positives = 108/187 (57%), Gaps = 5/187 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLD-GLRTILIK 60
++ GLGNP +Y RHNIGF +D + + K+F I+EG + L+K
Sbjct: 14 LIIGLGNPEPKYDRTRHNIGFEAVDSLARDWGLSWQENKRFQGFIAEGDSPLPGKIRLLK 73
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS+ V+++YKL E+ LVI+DD+DL G LR++ G GHNG+KS+
Sbjct: 74 PQTYMNRSGQSVRSVLDWYKLAP-ESILVIYDDMDLPLGRLRIRLSGSAGGHNGIKSMIA 132
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG+ + A I HVLG F+ E +L ++D +++ L K+
Sbjct: 133 HVGTENFARLRIGIGKSTEKAT-ISHVLGRFTPQENEVILKVLDLSRKAIELGLKQGLQK 191
Query: 180 FLNHIVS 186
++ +
Sbjct: 192 AMSLYNN 198
>gi|51596325|ref|YP_070516.1| peptidyl-tRNA hydrolase [Yersinia pseudotuberculosis IP 32953]
gi|149366057|ref|ZP_01888092.1| peptidyl-tRNA hydrolase [Yersinia pestis CA88-4125]
gi|167470769|ref|ZP_02335473.1| peptidyl-tRNA hydrolase [Yersinia pestis FV-1]
gi|218929122|ref|YP_002346997.1| peptidyl-tRNA hydrolase [Yersinia pestis CO92]
gi|229894720|ref|ZP_04509900.1| peptidyl-tRNA hydrolase [Yersinia pestis Pestoides A]
gi|229897420|ref|ZP_04512576.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229898063|ref|ZP_04513214.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229901932|ref|ZP_04517053.1| peptidyl-tRNA hydrolase [Yersinia pestis Nepal516]
gi|21263849|sp|Q8ZEY4|PTH_YERPE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052918|sp|Q66AY1|PTH_YERPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391038|sp|Q1C861|PTH_YERPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391039|sp|Q1CJK8|PTH_YERPN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|51589607|emb|CAH21237.1| peptidyl-tRNA hydrolase [Yersinia pseudotuberculosis IP 32953]
gi|115347733|emb|CAL20648.1| peptidyl-tRNA hydrolase [Yersinia pestis CO92]
gi|149292470|gb|EDM42544.1| peptidyl-tRNA hydrolase [Yersinia pestis CA88-4125]
gi|229680828|gb|EEO76923.1| peptidyl-tRNA hydrolase [Yersinia pestis Nepal516]
gi|229689104|gb|EEO81169.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229693757|gb|EEO83806.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229702193|gb|EEO90212.1| peptidyl-tRNA hydrolase [Yersinia pestis Pestoides A]
gi|320015313|gb|ADV98884.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 196
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEESKFFGYTARLNLAGQDIRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 65 PATFMNLSGKAVAAMASFYRILP-EEILVAHDELDILPGMAKLKLGGGNGGHNGLKDIQN 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + + VLG + E+ + ID R +L
Sbjct: 124 KLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQTLIDDAIDESIRCTEVLLNEGMT 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 KAMNRLHAFK 193
>gi|15902049|ref|NP_357599.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae R6]
gi|116515731|ref|YP_815426.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae D39]
gi|168484303|ref|ZP_02709255.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CDC1873-00]
gi|168491775|ref|ZP_02715918.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CDC0288-04]
gi|46576814|sp|Q8DRQ2|PTH_STRR6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|122279574|sp|Q04N59|PTH_STRP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|15457533|gb|AAK98809.1| Peptidyl-tRNA hydrolase [Streptococcus pneumoniae R6]
gi|116076307|gb|ABJ54027.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae D39]
gi|172042402|gb|EDT50448.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CDC1873-00]
gi|183573988|gb|EDT94516.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CDC0288-04]
Length = 189
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++++ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + R++IGIGRP + ++ HVL F + +L ID + S+ L +++
Sbjct: 122 HIGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDRDDYIGILQSIDKVDDSVNYYLQEKKFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|24378537|ref|NP_720492.1| peptidyl-tRNA hydrolase [Streptococcus mutans UA159]
gi|46576815|sp|Q8DWN5|PTH_STRMU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|24376385|gb|AAN57798.1|AE014853_5 putative peptidyl-tRNA hydrolase [Streptococcus mutans UA159]
Length = 189
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM +DRI + K F AE ++G + IK
Sbjct: 3 KLIVGLGNPGSKYHETKHNVGFMALDRIVKPLNVQFTENKTFKAETVATFINGEKIYFIK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ + +Y L +E+ +VI+DDLD++ G +R + G GHNG+KSI +
Sbjct: 63 PTTFMNASGLAVRAFLAYYNL-TVEDLIVIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
+ G + + R++IGIGRP D ++ +VLG F + + +D + +++ L +
Sbjct: 122 EIGTQEFDRIKIGIGRPKDKMTVVNYVLGKFDKKDEITIFNTLDKVDKAVNYYLQTKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QTMQKFN 188
>gi|284048779|ref|YP_003399118.1| peptidyl-tRNA hydrolase [Acidaminococcus fermentans DSM 20731]
gi|283953000|gb|ADB47803.1| peptidyl-tRNA hydrolase [Acidaminococcus fermentans DSM 20731]
Length = 209
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 70/189 (37%), Positives = 99/189 (52%), Gaps = 6/189 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILI 59
M +V LGN G EY RHNIGFM D + AW+K +A E ++ + +I
Sbjct: 1 MKLVVALGNIGREYAGTRHNIGFMTADLLAERWGDTEAWRKADNAFYLEKRMP-EKCWVI 59
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG ++ + NFY +P E+ LVI DD+DL GTLR++ G GHNGLKSI
Sbjct: 60 KPTTYMNNSGVAVADFANFYHIPP-EDVLVIQDDMDLPVGTLRIRRKGSSGGHNGLKSIE 118
Query: 120 EKCG-KNYKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + Y R+++GIG P +I HVL F ++ + +D A ++ K
Sbjct: 119 RALGSQAYPRIKVGIGHPVHQEQAVISHVLHPFQREDKEKVQEALDQAADAVEAWMKGAA 178
Query: 178 V-SFLNHIV 185
V +
Sbjct: 179 VGELMQQFN 187
>gi|303250512|ref|ZP_07336709.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307251554|ref|ZP_07533461.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|302650500|gb|EFL80659.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306861018|gb|EFM93024.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
Length = 194
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y + RHN G I+ I ++ KF ++++ G L+
Sbjct: 5 KLIVGLANPGTKYEDTRHNAGEWLINEIARQFNVSLKEEAKFFGKVAKINAAGGEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LV HD+LDL G ++K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALANFYRIKP-EEILVAHDELDLPLGVAKIKQGGGHGGHNGLKDIIA 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N+ R+RIGIG P + +VLG S ++ + +D R + LL K
Sbjct: 124 SLGNSNNFYRVRIGIGHPGSKELVAGYVLGKPSPQDQEKINAAVDEAGRCVDLLLKDGIT 183
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 184 KATNRLNAFK 193
>gi|311743168|ref|ZP_07716976.1| aminoacyl-tRNA hydrolase [Aeromicrobium marinum DSM 15272]
gi|311313848|gb|EFQ83757.1| aminoacyl-tRNA hydrolase [Aeromicrobium marinum DSM 15272]
Length = 188
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 107/187 (57%), Gaps = 5/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKF--HAEISEGQLDGLRTILI 59
+++AGLGNPG Y RHN+G++ D + WK AE+ EG+L G R +L
Sbjct: 3 WLIAGLGNPGPAYAATRHNVGYLVTDVLAERVGG-RWKSHRASRAEVVEGRLAGERVVLG 61
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+ +++MN SG + + F+ + E+ +V+HD+LD+DFG LRLK GGGD GHNGLKSI
Sbjct: 62 RSRSYMNESGGPVKAMATFFDVEP-EHLVVVHDELDIDFGQLRLKLGGGDNGHNGLKSIR 120
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G ++ R+R+GIGRPP + +VL +S+ ER L + A ++ L R
Sbjct: 121 GSLGTGDFHRVRVGIGRPPGQQTVHDYVLKPWSAAERKELDLNVVEAADAVESLLTRGLE 180
Query: 179 SFLNHIV 185
+ +
Sbjct: 181 ATQSAFN 187
>gi|83746830|ref|ZP_00943877.1| Peptidyl-tRNA hydrolase [Ralstonia solanacearum UW551]
gi|83726415|gb|EAP73546.1| Peptidyl-tRNA hydrolase [Ralstonia solanacearum UW551]
Length = 217
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 68/198 (34%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ H + +FH + L G L++
Sbjct: 20 KLIVGLGNPGAEYAATRHNAGFWLVDQLARMGHVTLRNETRFHGYAARATLWGHDVWLLQ 79
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG + + + FYK+P E LV HD+LDL G ++LK GGG GHNGLK I
Sbjct: 80 PQTFMNRSGLATVALARFYKIPPDE-ILVAHDELDLPPGAVKLKLGGGSGGHNGLKDIGA 138
Query: 121 KC-GKNYKRLRIGIGR----------PPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ + RLR+GIG P + VL E+ + ID +L
Sbjct: 139 HLTTQQFWRLRLGIGHPRNLLPPGTAPSGQHDVANFVLKAPRREEQELIDRAIDRSLDAL 198
Query: 170 PLLAKREDVSFLNHIVSV 187
P L + + +
Sbjct: 199 PDLVAGNTERAMMRLHTA 216
>gi|296840928|ref|ZP_06863813.2| aminoacyl-tRNA hydrolase [Neisseria polysaccharea ATCC 43768]
gi|296839600|gb|EFH23538.1| aminoacyl-tRNA hydrolase [Neisseria polysaccharea ATCC 43768]
gi|325135983|gb|EGC58593.1| peptidyl-tRNA hydrolase [Neisseria meningitidis M0579]
Length = 196
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG EY + RHN GF +D + +KKF E++ L L+K
Sbjct: 10 KMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARATLPDGDVWLLK 69
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 70 PTTFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 128
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLR+GIG P D ++ +VL S+ R + + +++P + +
Sbjct: 129 RLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRRQIDDAVAKSLQAIPDILAGKWEE 188
Query: 180 FLNHIVS 186
+ S
Sbjct: 189 ATRFLHS 195
>gi|325134060|gb|EGC56715.1| peptidyl-tRNA hydrolase [Neisseria meningitidis M13399]
Length = 192
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG EY + RHN GF +D + +KKF E++ L L+K
Sbjct: 6 KMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARATLPDGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PTTFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K G +Y RLR+GIG P D ++ +VL S+ R + + +++P + +
Sbjct: 125 KLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRRQIDDAVAKSLQAIPDILADKCEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 ATRFLHS 191
>gi|313668725|ref|YP_004049009.1| peptidyl-tRNA hydrolase [Neisseria lactamica ST-640]
gi|313006187|emb|CBN87649.1| putative peptidyl-tRNA hydrolase [Neisseria lactamica 020-06]
Length = 192
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG EY + RHN GF +D + +KKF E++ L L+K
Sbjct: 6 KMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARAALPDGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PATFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLR+GIG P D ++ +VL S+ R + I +++P + +
Sbjct: 125 RLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSAEHRRQIDDAIAKSLQAIPDIISGKWEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 ATRFLHS 191
>gi|227509304|ref|ZP_03939353.1| peptidyl-tRNA hydrolase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227191234|gb|EEI71301.1| peptidyl-tRNA hydrolase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 189
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 97/176 (55%), Gaps = 2/176 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN GFM ++ H +K +A++ ++G + ++++
Sbjct: 4 MKMIVGLGNIGPQYDGTRHNTGFMVVEEFAKKHGISIKTRKMNAKMGSAFVNGQKVLVVE 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +M+++++ N ++ +V+HDD+DL G +R+K G GHNG+KS+
Sbjct: 64 PTTFMNDSGIAVKPLMSYFEIEN-KDVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSLIN 122
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G + R+R+GI P ++ +VLG FS + DN +L
Sbjct: 123 NLGTEHFSRIRVGIAHPDKNNTVVNYVLGRFSKSQLPEFKIATDNAVNALEDWLDD 178
>gi|307710363|ref|ZP_07646804.1| peptidyl-tRNA hydrolase [Streptococcus mitis SK564]
gi|307618955|gb|EFN98090.1| peptidyl-tRNA hydrolase [Streptococcus mitis SK564]
Length = 189
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIEDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + + R++IGIGRP + ++ HVL F + +L ID + S+ L ++
Sbjct: 122 HIGTQTFNRVKIGIGRPKNGMSVVHHVLSTFDKDDYIGILQSIDKVDDSINYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|257126899|ref|YP_003165013.1| peptidyl-tRNA hydrolase [Leptotrichia buccalis C-1013-b]
gi|257050838|gb|ACV40022.1| peptidyl-tRNA hydrolase [Leptotrichia buccalis C-1013-b]
Length = 188
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF+ ID ++KF + + +G + K
Sbjct: 1 MKLIVGLGNPGEQYKLTRHNIGFIFIDEYLKEKNIADIREKFKSIFVQTNYNGDKVFYQK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ E + F+K+ VI+DD+D+ FG L++K G GHNG+KSI
Sbjct: 61 PATFMNLSGEAVGEAIRFFKIDPKTELFVIYDDMDMPFGKLKIKQTGSAGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED--V 178
G + R++ GIG+P I VLG FS E+ + + + + + K +
Sbjct: 121 HVGNEFVRIKFGIGKPKTKEETIGFVLGKFSPEEKEIVKDSRERMFNLIDDI-KDDMTIS 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 KLMNKYN 186
>gi|149003145|ref|ZP_01828054.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP14-BS69]
gi|221230953|ref|YP_002510105.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae ATCC 700669]
gi|225853616|ref|YP_002735128.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae JJA]
gi|237651084|ref|ZP_04525336.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CCRI 1974]
gi|237821197|ref|ZP_04597042.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CCRI 1974M2]
gi|254783890|sp|B8ZJI3|PTH_STRPJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783892|sp|C1CH85|PTH_STRZJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|147758886|gb|EDK65882.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP14-BS69]
gi|220673413|emb|CAR67871.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae ATCC 700669]
gi|225723480|gb|ACO19333.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae JJA]
Length = 189
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++++ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + R++IGIGRP + ++ HVL F + +L ID + S+ L ++
Sbjct: 122 HIGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDRDDYIGILQSIDKVDDSVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|261821683|ref|YP_003259789.1| peptidyl-tRNA hydrolase [Pectobacterium wasabiae WPP163]
gi|261605696|gb|ACX88182.1| peptidyl-tRNA hydrolase [Pectobacterium wasabiae WPP163]
Length = 195
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + + + KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAATRHNAGAWFVDCLAESYRQSLKEENKFFGYTARLNLAGQDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ + LV HD+LDL G +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVAAMATFYRI-QPDEILVAHDELDLLPGIAKLKLGGGHGGHNGLKDIIS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + + VLG E+ + ID R +L K + +
Sbjct: 124 KLGNNPNFHRLRIGIGHPGDKSKVTGFVLGKPPMSEQTLIDGAIDEAVRCTEILMKEDMI 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 KAMNRLHAFK 193
>gi|307728380|ref|YP_003905604.1| peptidyl-tRNA hydrolase [Burkholderia sp. CCGE1003]
gi|323524670|ref|YP_004226823.1| peptidyl-tRNA hydrolase [Burkholderia sp. CCGE1001]
gi|307582915|gb|ADN56313.1| peptidyl-tRNA hydrolase [Burkholderia sp. CCGE1003]
gi|323381672|gb|ADX53763.1| peptidyl-tRNA hydrolase [Burkholderia sp. CCGE1001]
Length = 200
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/196 (33%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLVDQLAREAGTTLRDERRFHGFYAKARLHGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ + F+K+ E LV HD+LD+ G+++LK GGG GHNGLK I+
Sbjct: 63 PQTYMNRSGQSVVALAQFFKILPDE-ILVAHDELDMPPGSVKLKLGGGSGGHNGLKDITA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + +VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANYVLKPPRREEQDVIDASIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P + K E + +
Sbjct: 182 PQIIKGELERAMMQLH 197
>gi|207742238|ref|YP_002258630.1| peptidyl-trna hydrolase (pth) protein [Ralstonia solanacearum
IPO1609]
gi|206593626|emb|CAQ60553.1| peptidyl-trna hydrolase (pth) protein [Ralstonia solanacearum
IPO1609]
Length = 200
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 68/198 (34%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ H + +FH + L G L++
Sbjct: 3 KLIVGLGNPGAEYAATRHNAGFWLVDQLARMGHVTLRNETRFHGYAARATLWGHDVWLLQ 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG + + + FYK+P E LV HD+LDL G ++LK GGG GHNGLK I
Sbjct: 63 PQTFMNRSGLATVALARFYKIPPDE-ILVAHDELDLPPGAVKLKLGGGSGGHNGLKDIGA 121
Query: 121 KC-GKNYKRLRIGIGR----------PPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ + RLR+GIG P + VL E+ + ID +L
Sbjct: 122 HLTTQQFWRLRLGIGHPRNLLPPGTAPSGQHDVANFVLKAPRREEQELIDRAIDRSLDAL 181
Query: 170 PLLAKREDVSFLNHIVSV 187
P L + + +
Sbjct: 182 PDLVAGNTERAMMRLHTA 199
>gi|239917086|ref|YP_002956644.1| peptidyl-tRNA hydrolase [Micrococcus luteus NCTC 2665]
gi|281414452|ref|ZP_06246194.1| peptidyl-tRNA hydrolase [Micrococcus luteus NCTC 2665]
gi|239838293|gb|ACS30090.1| peptidyl-tRNA hydrolase [Micrococcus luteus NCTC 2665]
Length = 191
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 104/186 (55%), Gaps = 4/186 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQ--LDGLRTILIK 60
++ GLGNPG EY RHN+G M D + S + + A ++ G+ + G R +L K
Sbjct: 7 LIVGLGNPGPEYERTRHNVGQMVADELASRMGVGFTRHRAGAVVATGRLGIGGPRVVLAK 66
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
+MN+SG+ + + +FY + E+ +V+HD+LD+ F TLRLK GGG+ GHNGLKSI+
Sbjct: 67 STGYMNVSGRPVSALASFYGIGP-EDLVVVHDELDIPFDTLRLKRGGGEGGHNGLKSITA 125
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K+Y R+R+GIGRPP + VL F+ PE+ L +D A ++ L
Sbjct: 126 SLGTKDYARVRVGIGRPPGRMDVADFVLRPFTKPEQDVLPLHVDRAADAVEKLVTDGLEP 185
Query: 180 FLNHIV 185
Sbjct: 186 AQQAFH 191
>gi|315037510|ref|YP_004031078.1| peptidyl-tRNA hydrolase [Lactobacillus amylovorus GRL 1112]
gi|325955974|ref|YP_004286584.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus 30SC]
gi|312275643|gb|ADQ58283.1| peptidyl-tRNA hydrolase [Lactobacillus amylovorus GRL 1112]
gi|325332539|gb|ADZ06447.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus 30SC]
gi|327182806|gb|AEA31253.1| peptidyl-tRNA hydrolase [Lactobacillus amylovorus GRL 1118]
Length = 185
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y + +HN GFM +D K KF ++ +++G IL++
Sbjct: 1 MKIIAGLGNPGQKYDKTKHNTGFMTMDHYLDEKGLSLDKDKFEGLWTKQKINGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ +V NF+K+ + E+ L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNESGRSVSQVANFFKV-DPEDILIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGI P + A ++ VL F+ ++ + D + + D
Sbjct: 120 DLGTEKFNRLKIGIRHPKN-ATVVSWVLTPFNDEQQKLMDDAFDTSVKIIDDFIAGRDSQ 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNKYN 185
>gi|302342166|ref|YP_003806695.1| peptidyl-tRNA hydrolase [Desulfarculus baarsii DSM 2075]
gi|301638779|gb|ADK84101.1| peptidyl-tRNA hydrolase [Desulfarculus baarsii DSM 2075]
Length = 200
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 2/184 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+V GLGNPG Y RHN GFM ++ + H K + +G ++G I PQ
Sbjct: 13 LVVGLGNPGPRYATTRHNAGFMVVEELARRHGVGLVKSGHQSIWGKGLVEGRPVIAALPQ 72
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG+++ ++++Y+LP +V HDDLDL+ G L++ GG AGH G+ SI
Sbjct: 73 TYMNLSGEAVAALLSYYRLPPT-QLVVAHDDLDLELGRLKVAARGGAAGHKGVGSIISLL 131
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G + + RLR G+GRP I + VL F + +R ++ A L ++ + +
Sbjct: 132 GTDEFARLRFGVGRPRHDEPIEQFVLNGFYADQRELGQKMVQVAADCLEVILGKGLAEAM 191
Query: 182 NHIV 185
Sbjct: 192 QRFH 195
>gi|171855139|sp|A7ZCE9|PTH_CAMC1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|158604936|gb|EAT99009.3| peptidyl-tRNA hydrolase (PTH) [Campylobacter concisus 13826]
Length = 182
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 78/189 (41%), Positives = 106/189 (56%), Gaps = 11/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHNIGFM ID + +F KF E+ + IL+K
Sbjct: 1 MTLIAGLGNPGPKYENTRHNIGFMLIDLLKDSNFKDVSSAKFQGEVFKFN----GIILLK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQS+ V +FYK + +VIHDDLDL FG ++ K GG GHNG+KSI
Sbjct: 57 PTTFMNLSGQSVKAVRDFYK---PDRIIVIHDDLDLSFGAVKFKKGGSSGGHNGIKSIDN 113
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y+R+R+GIG VLG FS E+ L I+ ++ L K +
Sbjct: 114 LIGNDYERVRVGIGH---EGDAKNFVLGEFSDEEKKALDEILAYTKNAVCELLKSDINE- 169
Query: 181 LNHIVSVRK 189
++ +V+K
Sbjct: 170 ISQKFTVKK 178
>gi|104773516|ref|YP_618496.1| peptidyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513511|ref|YP_812417.1| peptidyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|300812111|ref|ZP_07092559.1| aminoacyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|119390952|sp|Q1GBP4|PTH_LACDA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|122275719|sp|Q04C43|PTH_LACDB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|103422597|emb|CAI97200.1| Peptidyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116092826|gb|ABJ57979.1| peptidyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|300496950|gb|EFK32024.1| aminoacyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|325125147|gb|ADY84477.1| Peptidyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 185
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ LGNPG +Y + +HN GFM +D + KF A ++ ++ G I ++
Sbjct: 1 MKLIVALGNPGLKYEKTKHNTGFMALDHYLDEKGLRLDRDKFTALYAKEKVAGEDVIFME 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ F+K+ + + LVIHDD+D+ LR++ GG GHNG+KSI
Sbjct: 61 PQTYMNESGRAVGAAAKFFKI-DPSDILVIHDDMDMPIAKLRIRAGGKSGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGI P D ++ VL F+ ++ L + + + +D
Sbjct: 120 CLGTEKFNRLKIGIRHP-DKQSVVSWVLTPFNPDQQKELEASFAKVDQIIDDFIAGKDAQ 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNRYN 185
>gi|225867623|ref|YP_002743571.1| peptidyl-tRNA hydrolase [Streptococcus equi subsp. zooepidemicus]
gi|259535247|sp|C0MC67|PTH_STRS7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|225700899|emb|CAW97561.1| peptidyl-tRNA hydrolase [Streptococcus equi subsp. zooepidemicus]
Length = 189
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 58/187 (31%), Positives = 102/187 (54%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HN+GFM +DR+ + K F A + ++ + +K
Sbjct: 3 KMIVGLGNPGSKYQQTKHNVGFMAVDRLVKDLDISFTEDKTFKALVGSTFINQEKIYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + ++ +Y + + ++ +VI+DDLD+ G +RL+ G GHNG+KSI
Sbjct: 63 PTTFMNNSGLVVRALLTYYNI-STKDLMVIYDDLDMAVGKIRLRQKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G + + R++IGIGRP +I HVLG F + + + +D + +++ + +
Sbjct: 122 HIGTQEFDRVKIGIGRPSHGMSVINHVLGKFDTDDMITINIALDKVDKAINYYLQEKSIE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQQFN 188
>gi|328945179|gb|EGG39334.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK1087]
Length = 189
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 112/187 (59%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM +D+I K F A+I+ L+G + +K
Sbjct: 3 KLIVGLGNPGEKYIETKHNVGFMLVDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G + +KR++IGIGRP + ++ HVLG F + + +L +D + ++ + +
Sbjct: 122 HIGSQEFKRIKIGIGRPKEGMTVVHHVLGKFDTDDYITILNTLDKVDNAVNYYLQSDNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QTMQKYN 188
>gi|227497784|ref|ZP_03927970.1| aminoacyl-tRNA hydrolase [Actinomyces urogenitalis DSM 15434]
gi|226832784|gb|EEH65167.1| aminoacyl-tRNA hydrolase [Actinomyces urogenitalis DSM 15434]
Length = 198
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 78/193 (40%), Positives = 105/193 (54%), Gaps = 8/193 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD-------GL 54
+++ GLGNP Y NRHN+G M ID + K K A+++E +L G
Sbjct: 5 WLIIGLGNPEARYARNRHNVGHMVIDVLAGRAGSRLSKHKARAQVAEVRLGMAPGGAPGP 64
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R IL +P TFMNLSG + FY + N LVIHD+LDL TLRLK GGG+ GHNG
Sbjct: 65 RVILAEPATFMNLSGGPTAALAKFYGIDPATNLLVIHDELDLPAHTLRLKRGGGEGGHNG 124
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
L+SIS+ G +NY RLR+GIGRPP VL +F + ER L ++ A ++ +
Sbjct: 125 LRSISQAVGSRNYARLRVGIGRPPGRQDPADFVLSDFPARERAELDVTLELAADAVEAVV 184
Query: 174 KREDVSFLNHIVS 186
+ + S
Sbjct: 185 SAGFEAAQQQVNS 197
>gi|289166914|ref|YP_003445181.1| peptidyl-tRNA hydrolase [Streptococcus mitis B6]
gi|288906479|emb|CBJ21309.1| peptidyl-tRNA hydrolase [Streptococcus mitis B6]
Length = 189
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F +++ L+G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQTDLASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRVKGSAGGHNGIKSIIQ 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + + R++IGIGRP + ++ HVL F + +L ID + S+ L ++
Sbjct: 122 HIGTQTFNRVKIGIGRPKNGMSVVHHVLSTFDKDDYIGILQSIDKVDDSVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|240948404|ref|ZP_04752782.1| peptidyl-tRNA hydrolase [Actinobacillus minor NM305]
gi|240297230|gb|EER47788.1| peptidyl-tRNA hydrolase [Actinobacillus minor NM305]
Length = 194
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y E RHN G ++ + F+ + K+ ++++ L+
Sbjct: 5 KLIVGLANPGAKYEETRHNAGEWLVNELARMFNATLKDEAKYFGKVAKINTPQGEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LV HD+LDL G ++K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALANFYRIKP-EEILVAHDELDLPPGVAKIKQGGGHGGHNGLKDIIA 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N+ R+RIGIG P + +VLG SS ++ + +D +R + LL K V
Sbjct: 124 ALGNSNNFYRVRIGIGHPGHKDLVASYVLGKPSSTDQPLINAAVDEASRCVELLFKEGIV 183
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 184 KATNRLNAFK 193
>gi|322377901|ref|ZP_08052389.1| aminoacyl-tRNA hydrolase [Streptococcus sp. M334]
gi|321281077|gb|EFX58089.1| aminoacyl-tRNA hydrolase [Streptococcus sp. M334]
Length = 189
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
I+ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+K
Sbjct: 3 KILVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIEDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + R++IGIGRP + ++ HVL F + +L ID + S+ L ++
Sbjct: 122 HIGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDKDDYIGILQSIDKVDDSVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|270307957|ref|YP_003330015.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. VS]
gi|270153849|gb|ACZ61687.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. VS]
Length = 189
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 103/190 (54%), Gaps = 5/190 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY NRHN+GF C+ R + KK + G+++ +L K
Sbjct: 1 MKLIIGLGNPGKEYSGNRHNVGFQCLSRFAKDNHISLDKKCCLSRTGSGRINDEEIVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG++ +++ Y L + +V+ DDLDL G +RL+ GG GHNG+ SI
Sbjct: 61 PQTYMNLSGKAASQLLRRYNLK-AADIIVVQDDLDLPAGKIRLRLGGSAGGHNGISSIIT 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAH---IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G K + RL+IGIG+P + ++ HVLGNF ER + I + +L L
Sbjct: 120 DIGTKEFIRLKIGIGKPDSRNNGTEVVDHVLGNFGGEEREIMEKAITRASEALTCLLTCG 179
Query: 177 DVSFLNHIVS 186
+ N S
Sbjct: 180 LDTASNRFNS 189
>gi|169335435|ref|ZP_02862628.1| hypothetical protein ANASTE_01849 [Anaerofustis stercorihominis DSM
17244]
gi|169258173|gb|EDS72139.1| hypothetical protein ANASTE_01849 [Anaerofustis stercorihominis DSM
17244]
Length = 186
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 110/186 (59%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGN G EY RHNIGF +D I + K KF A+ +G+L G LIK
Sbjct: 1 MYLIVGLGNIGSEYNLTRHNIGFETVDYISDEYNIKINKTKFKADYGKGKLAGEEVFLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MNLSG+S+ +++K+P EN VI+DD++L G LR++ GG HNG+KSI +
Sbjct: 61 PRTYMNLSGESVKLFKDYFKIPE-ENIFVIYDDIELPKGKLRIRKNGGPGTHNGMKSIVK 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G KN+ R R+G+G P ++ +VLG FS+ E + ++ ++++ ++
Sbjct: 120 EIGTKNFPRFRMGVGSPEH-GDLVNYVLGRFSAEELPVIKDMVIMTSKAIFTALDKDLDK 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 AMNMYN 184
>gi|22126182|ref|NP_669605.1| peptidyl-tRNA hydrolase [Yersinia pestis KIM 10]
gi|45441663|ref|NP_993202.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Microtus str.
91001]
gi|108807390|ref|YP_651306.1| peptidyl-tRNA hydrolase [Yersinia pestis Antiqua]
gi|108811655|ref|YP_647422.1| peptidyl-tRNA hydrolase [Yersinia pestis Nepal516]
gi|145598403|ref|YP_001162479.1| peptidyl-tRNA hydrolase [Yersinia pestis Pestoides F]
gi|162419541|ref|YP_001606885.1| peptidyl-tRNA hydrolase [Yersinia pestis Angola]
gi|165926493|ref|ZP_02222325.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165938866|ref|ZP_02227420.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
IP275]
gi|166009227|ref|ZP_02230125.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166210569|ref|ZP_02236604.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401435|ref|ZP_02306932.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167420300|ref|ZP_02312053.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424700|ref|ZP_02316453.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|186895367|ref|YP_001872479.1| peptidyl-tRNA hydrolase [Yersinia pseudotuberculosis PB1/+]
gi|270490885|ref|ZP_06207959.1| aminoacyl-tRNA hydrolase [Yersinia pestis KIM D27]
gi|294503917|ref|YP_003567979.1| peptidyl-tRNA hydrolase [Yersinia pestis Z176003]
gi|21959147|gb|AAM85856.1|AE013832_6 peptidyl-tRNA hydrolase [Yersinia pestis KIM 10]
gi|45436525|gb|AAS62079.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Microtus str.
91001]
gi|108775303|gb|ABG17822.1| peptidyl-tRNA hydrolase [Yersinia pestis Nepal516]
gi|108779303|gb|ABG13361.1| peptidyl-tRNA hydrolase [Yersinia pestis Antiqua]
gi|145210099|gb|ABP39506.1| peptidyl-tRNA hydrolase [Yersinia pestis Pestoides F]
gi|162352356|gb|ABX86304.1| peptidyl-tRNA hydrolase [Yersinia pestis Angola]
gi|165913229|gb|EDR31852.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
IP275]
gi|165921714|gb|EDR38911.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165991782|gb|EDR44083.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207749|gb|EDR52229.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166961995|gb|EDR58016.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049131|gb|EDR60539.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056582|gb|EDR66351.1| peptidyl-tRNA hydrolase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|186698393|gb|ACC89022.1| peptidyl-tRNA hydrolase [Yersinia pseudotuberculosis PB1/+]
gi|262365899|gb|ACY62456.1| peptidyl-tRNA hydrolase [Yersinia pestis D182038]
gi|270339389|gb|EFA50166.1| aminoacyl-tRNA hydrolase [Yersinia pestis KIM D27]
gi|294354376|gb|ADE64717.1| peptidyl-tRNA hydrolase [Yersinia pestis Z176003]
Length = 206
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + L G L+
Sbjct: 15 KLIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEESKFFGYTARLNLAGQDIRLLV 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 75 PATFMNLSGKAVAAMASFYRILP-EEILVAHDELDILPGMAKLKLGGGNGGHNGLKDIQN 133
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + + VLG + E+ + ID R +L
Sbjct: 134 KLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQTLIDDAIDESIRCTEVLLNEGMT 193
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 194 KAMNRLHAFK 203
>gi|320527117|ref|ZP_08028304.1| peptidyl-tRNA hydrolase [Solobacterium moorei F0204]
gi|320132445|gb|EFW24988.1| peptidyl-tRNA hydrolase [Solobacterium moorei F0204]
Length = 193
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG EY + RHN GF+ +D++ +K++A ++ +++G + L+K
Sbjct: 1 MKLIAGLGNPGKEYEKTRHNSGFLAVDKLAEKLGTSITSEKWNALVASVRINGEQVTLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ + + FYKL E+ L++HDD+D+ G LR++ G G G+KSI
Sbjct: 61 PLTYMNESGSAVSQAVKFYKL-QPEDILILHDDMDIPVGALRIRKNGSGGGQKGMKSIIN 119
Query: 121 KCGKN-YKRLRIGIGR--PPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + R+RIG+G P + A + VL ER II A +
Sbjct: 120 ALGTDQIARVRIGVGHSEPGNHAKVPDWVLSPVPKAEREEFERIISIAADAAAAWVNEPL 179
Query: 178 VSFLNHIVSVRK 189
+N K
Sbjct: 180 DKVMNKFNIKEK 191
>gi|330445225|ref|ZP_08308877.1| peptidyl-tRNA hydrolase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489416|dbj|GAA03374.1| peptidyl-tRNA hydrolase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 196
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 96/189 (50%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G ++ + H K+ ++G L+ P
Sbjct: 7 LLVGLANPGQEYARTRHNAGAWVVEELARVHNVTLRPDPKYFGLTGRITVNGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + NF+++ E LV HD+LDL G + K GGG GHNGL+ I K
Sbjct: 67 TTFMNLSGKSVAALANFFQIKP-EEILVAHDELDLPPGVAKFKKGGGHGGHNGLRDIISK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLRI IG P D + +VLG + E+ + +D R + LL K
Sbjct: 126 MGNNKDFYRLRIAIGHPGDKNKVAGYVLGKAPAKEQELIDAAVDESVRCIDLLLKDGLTK 185
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 186 AQNRLHSFK 194
>gi|255994798|ref|ZP_05427933.1| aminoacyl-tRNA hydrolase [Eubacterium saphenum ATCC 49989]
gi|255993511|gb|EEU03600.1| aminoacyl-tRNA hydrolase [Eubacterium saphenum ATCC 49989]
Length = 186
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 63/186 (33%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHN+GFM ID I + K+KF + + E + + +L+K
Sbjct: 1 MKVIVGLGNPGKDYEKTRHNVGFMVIDEIANKLGISGGKEKFDSLLLEDFVGREKVVLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ +M+FY L + + +VI+DD+D+D G LR++ G HNG+KSI
Sbjct: 61 PLTFMNDSGRAVRRIMDFYSL-DPGDIIVIYDDVDIDLGKLRIRKNGSAGTHNGMKSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ ++ R+R+GI + R VL NFS E ++ ++ A + + +
Sbjct: 120 ELKSDDFPRVRLGI-NKEKRGDLKRFVLKNFSKDEIPMIIDVVKRAADAALAMVDDDIDK 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 VMNQFN 184
>gi|149199259|ref|ZP_01876297.1| peptidyl-tRNA hydrolase [Lentisphaera araneosa HTCC2155]
gi|149137684|gb|EDM26099.1| peptidyl-tRNA hydrolase [Lentisphaera araneosa HTCC2155]
Length = 214
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 102/185 (55%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG Y RHN+GF ID F +KKK+ AE +E + +G + I IKP
Sbjct: 16 YLICGLGNPGSSYENTRHNVGFKAIDLFAEK-FSLKFKKKWRAEYAECEDEGNKYIFIKP 74
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+++ + + E +VI+D++ L G LRL+ GG GHNG+KSI +
Sbjct: 75 MTYMNNSGEAIKKFAKKNSVK-AEEIIVIYDEMSLKVGRLRLRLGGSAGGHNGVKSILQY 133
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ R+RIG+ P A I +VL +F+ E + P + ++ +L + +
Sbjct: 134 FGGADFYRVRIGVDHPGKGADIADYVLSDFTLSEMALISPAVSASVDAVLMLCTKGCDAA 193
Query: 181 LNHIV 185
+N
Sbjct: 194 MNTFN 198
>gi|119390957|sp|Q0ARN8|PTH_MARMM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 200
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 76/185 (41%), Positives = 112/185 (60%), Gaps = 1/185 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGN +Y NRHN+GFM +D I W+K+F SE + + +L+K
Sbjct: 1 MKILAGLGNYEPKYLRNRHNVGFMALDIIAQAWNAGPWRKRFQGLASEVTIGSNKLLLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTF N +G S+ FY++ E+ +V HD+LDL G R+K GGG AG+NG+KSI+
Sbjct: 61 PQTFYNNAGNSVGAAAAFYRVKP-EDIIVFHDELDLAPGKFRMKMGGGAAGNNGIKSITS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ G +++R RIGIG P D + +VL +F+ E +L+ ++D IA SL LLA + +F
Sbjct: 120 QLGPDFRRARIGIGHPGDRNRVTGYVLSDFAKAEEAWLIDLLDAIAGSLDLLAAGDYDAF 179
Query: 181 LNHIV 185
+
Sbjct: 180 QTKVT 184
>gi|85059859|ref|YP_455561.1| peptidyl-tRNA hydrolase [Sodalis glossinidius str. 'morsitans']
gi|119391010|sp|Q2NRR9|PTH_SODGM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|84780379|dbj|BAE75156.1| peptidyl-tRNA hydrolase [Sodalis glossinidius str. 'morsitans']
Length = 194
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 100/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G ++ + + + KF+ L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVELLAERYRQTLKEESKFYGYTGRLTLGGQDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E+ LV HD+LDL G+ RLK GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMATFYRIAP-EDILVAHDELDLLPGSARLKLGGGHGGHNGLKDIIS 122
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N + RLRIGI P D ++ VLG + ER + ID R +L ++ V
Sbjct: 123 RLGNNPQFHRLRIGISHPGDKNQVVGFVLGKPPTAERQLIDSAIDEAVRCTEILVTQDAV 182
Query: 179 SFLNHIVSVR 188
+N + + R
Sbjct: 183 KAMNRLHAYR 192
>gi|238020996|ref|ZP_04601422.1| hypothetical protein GCWU000324_00893 [Kingella oralis ATCC 51147]
gi|237867976|gb|EEP68982.1| hypothetical protein GCWU000324_00893 [Kingella oralis ATCC 51147]
Length = 190
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNP EY RHN GF ID + + +KKFH +I+ L+K
Sbjct: 4 KLIVGLGNPTAEYEHTRHNAGFWFIDELAWQWKAQLKSEKKFHGDIARVAQPQGDVWLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ ++ FYK+ E LV+HD+LD+ G +R K GGG+ GHNGLK I
Sbjct: 64 PDTYMNLSGKAVAALVQFYKI-QPEEILVVHDELDIPCGQIRYKLGGGNGGHNGLKDIQA 122
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K G N+ RLR+GIG P D ++ VL + ER + I +++P + +
Sbjct: 123 KLGTPNFYRLRLGIGHPGDRNLVVGFVLSKPPASERQLIDNAIAKSLQAMPDIMAGDLEK 182
Query: 180 FLNHIVS 186
+ H+ S
Sbjct: 183 TVRHLHS 189
>gi|261416826|ref|YP_003250509.1| peptidyl-tRNA hydrolase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373282|gb|ACX76027.1| peptidyl-tRNA hydrolase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 184
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++ GLGNPG +Y HN GFM ++++ WK + A + + G +L+K
Sbjct: 1 MYLIVGLGNPGTQYSNTHHNAGFMAVEKLAD--PSKDWKSEHKALTMKVNIAGEECLLVK 58
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ +M +YK+ +++ LV DD++LD G +R + G G NGL++I E
Sbjct: 59 PQTYMNLSGEAVQALMTWYKVK-VDHLLVFSDDINLDVGRIRCRKDGSHGGQNGLRNIIE 117
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + R+R G+G+ P + VL FS +R I + + K
Sbjct: 118 HVGDKFPRIRFGVGKCPPKFDLSNWVLAKFSPEDRPKFDEAIAKVPALVECYFKLGIEKC 177
Query: 181 LNHIV 185
+
Sbjct: 178 MERYN 182
>gi|59800823|ref|YP_207535.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae FA 1090]
gi|194098115|ref|YP_002001163.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae NCCP11945]
gi|239998571|ref|ZP_04718495.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae 35/02]
gi|240013696|ref|ZP_04720609.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae DGI18]
gi|240016136|ref|ZP_04722676.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae FA6140]
gi|240080278|ref|ZP_04724821.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae FA19]
gi|240112490|ref|ZP_04726980.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae MS11]
gi|240115230|ref|ZP_04729292.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID18]
gi|240117517|ref|ZP_04731579.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID1]
gi|240120765|ref|ZP_04733727.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID24-1]
gi|240125323|ref|ZP_04738209.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae SK-92-679]
gi|240127775|ref|ZP_04740436.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae SK-93-1035]
gi|254493292|ref|ZP_05106463.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae 1291]
gi|260440952|ref|ZP_05794768.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae DGI2]
gi|268594430|ref|ZP_06128597.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae 35/02]
gi|268596426|ref|ZP_06130593.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae FA19]
gi|268598557|ref|ZP_06132724.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae MS11]
gi|268600910|ref|ZP_06135077.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID18]
gi|268603216|ref|ZP_06137383.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID1]
gi|268683924|ref|ZP_06150786.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae SK-92-679]
gi|268686167|ref|ZP_06153029.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae SK-93-1035]
gi|291044280|ref|ZP_06569989.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae DGI2]
gi|293399472|ref|ZP_06643625.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae F62]
gi|68052868|sp|Q5F9L4|PTH_NEIG1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238690184|sp|B4RK78|PTH_NEIG2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|59717718|gb|AAW89123.1| putative peptidyl-tRNA hydrolase [Neisseria gonorrhoeae FA 1090]
gi|193933405|gb|ACF29229.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae NCCP11945]
gi|226512332|gb|EEH61677.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae 1291]
gi|268547819|gb|EEZ43237.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae 35/02]
gi|268550214|gb|EEZ45233.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae FA19]
gi|268582688|gb|EEZ47364.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae MS11]
gi|268585041|gb|EEZ49717.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID18]
gi|268587347|gb|EEZ52023.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID1]
gi|268624208|gb|EEZ56608.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae SK-92-679]
gi|268626451|gb|EEZ58851.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae SK-93-1035]
gi|291011174|gb|EFE03170.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae DGI2]
gi|291610041|gb|EFF39163.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae F62]
gi|317163845|gb|ADV07386.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 192
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG EY + RHN GF +D + +KKF E++ L L+K
Sbjct: 6 KMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARAALPDGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PATFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K G +Y RLR+GIG P D ++ +VL S+ R + + +++P + +
Sbjct: 125 KLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSAEHRRQIDDAVAKSLQAVPDIISGKWEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 ATRFLHS 191
>gi|325914243|ref|ZP_08176593.1| peptidyl-tRNA hydrolase [Xanthomonas vesicatoria ATCC 35937]
gi|325539498|gb|EGD11144.1| peptidyl-tRNA hydrolase [Xanthomonas vesicatoria ATCC 35937]
Length = 193
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 63/189 (33%), Positives = 92/189 (48%), Gaps = 3/189 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D + K E ++ + G L+KP
Sbjct: 6 LIVGLGNPGPEHTQTRHNAGFRFVDALIERSGARWGLDSKLFGETAKVDIAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E LV HD++DL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSITAALRFWKIEP-EQMLVAHDEMDLAPGTARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG + + +D LPL
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGRDDDAAIGNAVDAAIDVLPLAMDGNFNEA 184
Query: 181 LNHIVSVRK 189
+ + + +K
Sbjct: 185 MKRLHTEKK 193
>gi|240123071|ref|ZP_04736027.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID332]
gi|268681697|ref|ZP_06148559.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID332]
gi|268621981|gb|EEZ54381.1| peptidyl-tRNA hydrolase [Neisseria gonorrhoeae PID332]
Length = 192
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG EY + RHN GF +D + +KKF E++ L L+K
Sbjct: 6 KMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARAALPDGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PATFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K G +Y RLR+GIG P D ++ +VL S+ R + + +++P + +
Sbjct: 125 KLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSAEHRRQIDDAVAKSLQAVPDILAGKWEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 ATRFLHS 191
>gi|241661894|ref|YP_002980254.1| peptidyl-tRNA hydrolase [Ralstonia pickettii 12D]
gi|240863921|gb|ACS61582.1| peptidyl-tRNA hydrolase [Ralstonia pickettii 12D]
Length = 200
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 13/199 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ + +FH + L G L++
Sbjct: 3 KLIVGLGNPGAEYAATRHNAGFWLVDQLARMGNVTLRNETRFHGYAARANLWGNEVWLLQ 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG + + + FYK+ E LV+HD+LDL G ++LK GGG GHNGLK I+
Sbjct: 63 PQTFMNRSGLATVALARFYKVMPDE-ILVVHDELDLPPGAVKLKLGGGSGGHNGLKDIAA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ + RLR+GIG P + VL E+ + ID +L
Sbjct: 122 HLTTQQFWRLRLGIGHPRNLLPPGTAASGQHDVANFVLKAPRKEEQDLIDRAIDQSLDAL 181
Query: 170 PLLAKREDVSFLNHIVSVR 188
P L + + + R
Sbjct: 182 PELIAGNAEKAMMRLHTAR 200
>gi|91204544|emb|CAJ70772.1| similar to peptidyl-tRNA hydrolase [Candidatus Kuenenia
stuttgartiensis]
Length = 186
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 100/184 (54%), Gaps = 3/184 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GFM ID + KF + + +++ IL+K
Sbjct: 3 MKMIVGLGNPGEKYLRTRHNLGFMVIDEFSQQLEMGGVQHKFQSLFCKKEVEHEEIILLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG ++ EV N YK + +V+ DDLDL G LR++ GG GH GL+S++
Sbjct: 63 PQTFMNLSGIAVQEVANMYKC-QPRDVMVVCDDLDLPLGKLRIRRSGGCGGHRGLESVAS 121
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ RLRIGIGRP R VL FS+ E + + ++L + S
Sbjct: 122 SLGTADFPRLRIGIGRP-KFNDTSRFVLSMFSAEEDVEIAKSLQEACKALKTWVYKGIES 180
Query: 180 FLNH 183
+N
Sbjct: 181 CMNE 184
>gi|119715157|ref|YP_922122.1| peptidyl-tRNA hydrolase [Nocardioides sp. JS614]
gi|119535818|gb|ABL80435.1| peptidyl-tRNA hydrolase [Nocardioides sp. JS614]
Length = 217
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 71/192 (36%), Positives = 106/192 (55%), Gaps = 8/192 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKF-HAEISEGQLD-----GLR 55
++V GLGNPG Y +RHN+G++ D + S P K AE+ EG+L G R
Sbjct: 27 WLVVGLGNPGPTYAGHRHNVGYLVADELASRLGAPFRAHKSGRAEVVEGRLGVPGQPGPR 86
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L++ + +MN +G + ++ FYK+P E + +HD+LD+ F T+R+K GGGD GHNGL
Sbjct: 87 VVLMRARCYMNETGGPVKQLAGFYKVPP-ERIIAVHDELDIAFDTMRVKLGGGDNGHNGL 145
Query: 116 KSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+S+ G ++ R+R+GIGRPP VL N+SS ER L +D A ++ L
Sbjct: 146 RSMRSSLGTGDFYRVRVGIGRPPGRQDPADFVLSNYSSSERKVLPFQVDRAADAVEALVT 205
Query: 175 REDVSFLNHIVS 186
S
Sbjct: 206 EGLERTQQRFNS 217
>gi|148988909|ref|ZP_01820324.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP6-BS73]
gi|168493995|ref|ZP_02718138.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CDC3059-06]
gi|147925720|gb|EDK76796.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP6-BS73]
gi|183575957|gb|EDT96485.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CDC3059-06]
gi|301793330|emb|CBW35689.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae INV104]
Length = 189
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++++ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + R++IGIGRP + ++ HVL F + +L +D + S+ L ++
Sbjct: 122 HIGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDRDDYIGILQSVDKVDDSVKYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|162146758|ref|YP_001601217.1| peptidyl-tRNA hydrolase [Gluconacetobacter diazotrophicus PAl 5]
gi|161785333|emb|CAP54879.1| putative peptidyl-tRNA hydrolase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 179
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 70/171 (40%), Positives = 114/171 (66%), Gaps = 2/171 (1%)
Query: 16 ENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEV 75
+RHN+GFM +DRI + H F W+K+F E++EG++ + +L+KP T+MNLSG+S+ +
Sbjct: 3 RHRHNVGFMAVDRIATRHGFAPWRKRFRGEVAEGRVGTHKVLLLKPLTYMNLSGESVQQA 62
Query: 76 MNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-KNYKRLRIGIG 134
FYK+P +E+ HD+LDL G +R+K GGG AGHNGL+S+ + G ++Y R+RIGIG
Sbjct: 63 AAFYKIP-VESITAFHDELDLAPGRVRVKRGGGAAGHNGLRSMDKMLGSQDYWRVRIGIG 121
Query: 135 RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIV 185
P + HVLG+F+ ++ +L ++D ++ + P+LA + F+ +
Sbjct: 122 HPGVRERVTGHVLGDFAKSDQDWLERMLDAMSDTAPVLADGQPELFMTKMA 172
>gi|269124233|ref|YP_003306810.1| peptidyl-tRNA hydrolase [Streptobacillus moniliformis DSM 12112]
gi|268315559|gb|ACZ01933.1| peptidyl-tRNA hydrolase [Streptobacillus moniliformis DSM 12112]
Length = 365
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 116/189 (61%), Gaps = 1/189 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG+EY +NRHNIGF+ +D+ + K+K+ + ++ + K
Sbjct: 1 MKLIVGLGNPGNEYEKNRHNIGFIYLDKYLKANNISNLKEKYKSLYTKELIKNETVFFQK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E+++F+K+ ++ LVI+DD+DL G +++K G AGHNG+ SI
Sbjct: 61 PQTYMNLSGEAIKELISFFKINPKKDLLVIYDDMDLKLGEVKIKNNGRSAGHNGINSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ + R+++GIG+P + + +I HVLGNF+ E L + +I + + D+
Sbjct: 121 HIGEEFIRIKVGIGKPNNKS-VISHVLGNFTEEENIILNKLDQHIFKIINAFISNNDIEK 179
Query: 181 LNHIVSVRK 189
L +++K
Sbjct: 180 LMSKYNIKK 188
>gi|315924904|ref|ZP_07921121.1| aminoacyl-tRNA hydrolase [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621803|gb|EFV01767.1| aminoacyl-tRNA hydrolase [Pseudoramibacter alactolyticus ATCC
23263]
Length = 188
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 59/186 (31%), Positives = 99/186 (53%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG Y + RHN+GFM +D + K + + + R L+
Sbjct: 1 MFLIVGLGNPGPRYADTRHNVGFMAVDALAKAKQVLLNKAEHFGLTGDYREGAERIKLVL 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+ + + ++YK+P+ E +VI+DD+DL G LR++ GG HNG++S+
Sbjct: 61 PQTFMNESGRCVRALADYYKVPS-EQIVVIYDDVDLAPGQLRIRPKGGAGTHNGMRSVVG 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ R+RIGIG P + +VLG+ + + + A++ ++
Sbjct: 120 HLGTTDFPRVRIGIGESPRGWDLADYVLGHLFGDDGEAVRTAVGQAAKAAAMIVSDGVDL 179
Query: 180 FLNHIV 185
+N +
Sbjct: 180 AMNRMN 185
>gi|238899116|ref|YP_002924798.1| peptidyl-tRNA hydrolase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466876|gb|ACQ68650.1| peptidyl-tRNA hydrolase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 197
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 68/188 (36%), Positives = 98/188 (52%), Gaps = 4/188 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NP EY + RHN G + ++ H K KF ++ +L+
Sbjct: 5 KLIVGLANPTAEYSQTRHNAGAWYVKQLSERHNLSLKKSPKFFGYTGRLKIANQNVLLMI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P FMNLSG ++ + FY++ E LV HD+LD G + KTGGG+AGHNGLK I +
Sbjct: 65 PDVFMNLSGTAVFAITKFYQILP-EELLVAHDELDFLPGQAKFKTGGGNAGHNGLKDIQK 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P DT+ ++ VLG E+ + ID +L K +
Sbjct: 124 KLGNNSEFHRLRIGIGHPGDTSKVVGFVLGKPPVSEKKLIDHAIDECLTFTEILFKENMI 183
Query: 179 SFLNHIVS 186
++H+ S
Sbjct: 184 KAVHHLHS 191
>gi|320538907|ref|ZP_08038583.1| peptidyl-tRNA hydrolase [Serratia symbiotica str. Tucson]
gi|320031067|gb|EFW13070.1| peptidyl-tRNA hydrolase [Serratia symbiotica str. Tucson]
Length = 201
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + L G L+
Sbjct: 5 KLIVGLANPGMEYAQTRHNAGAWYVDLLAQRYHQQLKEENKFFGYTTRLNLAGNDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++L + NFY++ E LV HD+LDL G ++K GGG+ GHNGLK I
Sbjct: 65 PTTFMNLSGKAVLAMANFYRIEPDE-ILVAHDELDLPPGVAKIKLGGGNGGHNGLKDIQN 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + ++ VLG + E+ + ID +L K
Sbjct: 124 KFGNNPNFYRLRIGIGHPGDKSKVVGFVLGKPPTSEQEMIDKAIDESLHCSEMLMKDGLE 183
Query: 179 SFLNHIVSVR 188
+ + + S +
Sbjct: 184 NAVQRLHSFK 193
>gi|58584354|ref|YP_197927.1| peptidyl-tRNA hydrolase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|68052872|sp|Q5GTI9|PTH_WOLTR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|58418670|gb|AAW70685.1| Peptidyl-tRNA hydrolase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 182
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 75/185 (40%), Positives = 115/185 (62%), Gaps = 3/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y HNIGF+ +D I F ++ KK I+ ++ + +L+K
Sbjct: 1 MHLIVGLGNPGSQYELTYHNIGFIIVDAICKHWNFQSFSKKADCLITSSVINDNKIMLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +FMN SG + + NFYK +L+N +VIHDD DL+ G +++K GGG AGHNGLKSI
Sbjct: 61 PYSFMNNSGIPVARIRNFYKF-SLDNVIVIHDDADLEPGRIKIKKGGGSAGHNGLKSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLR GIGR + +VL FS+ ++P+++ IA+++ L+ + +++F
Sbjct: 120 SIGNDYWRLRFGIGRSDSQRSLADYVLSKFSN--LDDVIPLVERIAQNIHLMLQGNNIAF 177
Query: 181 LNHIV 185
N IV
Sbjct: 178 TNSIV 182
>gi|296111606|ref|YP_003621988.1| peptidyl-tRNA hydrolase [Leuconostoc kimchii IMSNU 11154]
gi|295833138|gb|ADG41019.1| peptidyl-tRNA hydrolase [Leuconostoc kimchii IMSNU 11154]
Length = 189
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 62/185 (33%), Positives = 104/185 (56%), Gaps = 2/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G +Y + RHNIGFM +D + + K A ++ +DG + +L+K
Sbjct: 1 MKYIIGLGNIGKQYDKTRHNIGFMALDAFAAAYQASFTPSKQFATTAKITVDGEQVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ ++++Y ++ LV+ DD+DL FG LR + G GHNGLKSI
Sbjct: 61 PTTYMNDSGKAVRAILDYYGGDINQDVLVLVDDMDLPFGKLRFRAKGSAGGHNGLKSIIA 120
Query: 121 K-CGKNYKRLRIGIGRPPD-TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ + RL+ G+G P +I +VLG F++ E + ++DN ++L +
Sbjct: 121 HTNSQTFLRLKFGLGHPDHDKQVVINYVLGQFTATESQDVEHMLDNSTKALVDWIQGATT 180
Query: 179 SFLNH 183
+ L++
Sbjct: 181 AQLSN 185
>gi|227522402|ref|ZP_03952451.1| peptidyl-tRNA hydrolase [Lactobacillus hilgardii ATCC 8290]
gi|227090460|gb|EEI25772.1| peptidyl-tRNA hydrolase [Lactobacillus hilgardii ATCC 8290]
Length = 189
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 97/176 (55%), Gaps = 2/176 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN GFM ++ + +K +A++ ++G + ++++
Sbjct: 4 MKMIVGLGNIGPQYDGTRHNTGFMVVEEFAKKYGISIKTRKMNAKMGSAFVNGQKVLVVE 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +M+++++ N ++ +V+HDD+DL G +R+K G GHNG+KS+
Sbjct: 64 PTTFMNDSGIAVKPLMSYFEIEN-KDVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSLIN 122
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G + R+R+GI P ++ +VLG FS + DN +L
Sbjct: 123 NLGTEHFSRIRVGIAHPDKNNTVVNYVLGRFSKSQLPEFKIATDNAVNALEDWLDD 178
>gi|146317669|ref|YP_001197381.1| peptidyl-tRNA hydrolase [Streptococcus suis 05ZYH33]
gi|146319858|ref|YP_001199569.1| peptidyl-tRNA hydrolase [Streptococcus suis 98HAH33]
gi|253750930|ref|YP_003024071.1| peptidyl-tRNA hydrolase [Streptococcus suis SC84]
gi|253752829|ref|YP_003025969.1| peptidyl-tRNA hydrolase [Streptococcus suis P1/7]
gi|253754654|ref|YP_003027794.1| peptidyl-tRNA hydrolase [Streptococcus suis BM407]
gi|166229459|sp|A4VYI0|PTH_STRS2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229461|sp|A4VS92|PTH_STRSY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145688475|gb|ABP88981.1| Peptidyl-tRNA hydrolase [Streptococcus suis 05ZYH33]
gi|145690664|gb|ABP91169.1| Peptidyl-tRNA hydrolase [Streptococcus suis 98HAH33]
gi|251815219|emb|CAZ50783.1| peptidyl-tRNA hydrolase [Streptococcus suis SC84]
gi|251817118|emb|CAZ54839.1| peptidyl-tRNA hydrolase [Streptococcus suis BM407]
gi|251819074|emb|CAR44088.1| peptidyl-tRNA hydrolase [Streptococcus suis P1/7]
gi|292557471|gb|ADE30472.1| Peptidyl-tRNA hydrolase [Streptococcus suis GZ1]
gi|319757179|gb|ADV69121.1| peptidyl-tRNA hydrolase [Streptococcus suis JS14]
Length = 189
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 64/179 (35%), Positives = 104/179 (58%), Gaps = 3/179 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y E +HN+GFM +D+I K F A+I+ +DG + L+KP
Sbjct: 4 LIIGLGNPGDRYFETKHNVGFMLLDKIAKRENVTFNHDKIFQADIATTFIDGEKIYLVKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ +M +Y L + + LV +DDLD+ G +R + G GHNG+KSI +
Sbjct: 64 TTFMNESGKAVHALMTYYGL-DATDILVAYDDLDMAVGKIRFRQKGSAGGHNGIKSIVKH 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R++IGIGRP ++ HVL F +R + +D + +++ + + +D
Sbjct: 123 IGTQEFDRIKIGIGRPKGKMSVVNHVLSGFDIEDRIEIDLALDKLDKAVNVYLEEDDFD 181
>gi|149194452|ref|ZP_01871549.1| peptidyl-tRNA hydrolase [Caminibacter mediatlanticus TB-2]
gi|149135627|gb|EDM24106.1| peptidyl-tRNA hydrolase [Caminibacter mediatlanticus TB-2]
Length = 179
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 72/174 (41%), Positives = 100/174 (57%), Gaps = 5/174 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +NRHN+GFM ID + KF E+ + +K
Sbjct: 1 MKLIVGLGNPGKKYEKNRHNVGFMVIDYLIDKFRASKLSSKFKGEL----FKSNDFLFLK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ V +FYK+ + ++ +VIHDDLDL G L+ K GG GHNGLKSI
Sbjct: 57 PTTFMNLSGESIKLVKDFYKI-DNKDIIVIHDDLDLKLGALKFKRGGSSGGHNGLKSIDN 115
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G +Y R+RIGIGRP ++ +VL NF E + + I ++ + K
Sbjct: 116 LIGNDYYRIRIGIGRPEKKEEVVNYVLNNFHENELECIKKLFPLIEEAIKDIKK 169
>gi|313123079|ref|YP_004033338.1| peptidyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312279642|gb|ADQ60361.1| Peptidyl-tRNA hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 185
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ LGNPG +Y + +HN GFM +D + KF A ++ ++ G I ++
Sbjct: 1 MKLIVALGNPGLKYEKTKHNTGFMALDHYLDEKGLRLDRDKFTALYAKEKVAGEDVIFME 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ F+K+ + + LVIHDD+D+ LR++ GG GHNG+KSI
Sbjct: 61 PQTYMNESGRAVGAAAKFFKI-DPSDILVIHDDMDMPIAKLRIRAGGKSGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGI P D ++ VL F+ ++ L + + + +D
Sbjct: 120 CLGTEKFNRLKIGIRHP-DKQSVVSWVLTPFNPDQQKELEASFVKVDQIIDDFIAGKDAQ 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNRYN 185
>gi|110639010|ref|YP_679219.1| peptidyl-tRNA hydrolase [Cytophaga hutchinsonii ATCC 33406]
gi|119390930|sp|Q11RT7|PTH_CYTH3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110281691|gb|ABG59877.1| peptidyl-tRNA hydrolase [Cytophaga hutchinsonii ATCC 33406]
Length = 188
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 3/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM +D + + K HA I+E ++ G IL+KP
Sbjct: 3 YLIIGLGNIGSEYHETRHNIGFMVLDDLAQEKGVT-FDLKRHAHIAEVKVKGRTLILVKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M K+ LEN LVI DDL L FGTLR++ G GHNGL I +
Sbjct: 62 TTYMNLSGKAVQYWMQEEKIA-LENILVITDDLALPFGTLRMRMKGSSGGHNGLSHIEQT 120
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
NY RLR+G+G + +VL FS+ E+ + ++ ++ A
Sbjct: 121 LASANYTRLRMGVGSDFAKGQQVDYVLAPFSAEEQKEMPDVLKRAKDAVTGFATIGVERA 180
Query: 181 LNHIVSVR 188
+N + + +
Sbjct: 181 MNAVNTKK 188
>gi|329117398|ref|ZP_08246115.1| aminoacyl-tRNA hydrolase [Streptococcus parauberis NCFD 2020]
gi|326907803|gb|EGE54717.1| aminoacyl-tRNA hydrolase [Streptococcus parauberis NCFD 2020]
Length = 189
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGN G +Y +HN+GFM IDRI + K F A I L+ + +K
Sbjct: 3 KMIVGLGNIGSKYDMTKHNVGFMAIDRIVKDLNINFSEDKNFKALIGSSFLNQEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + +++ +VI+DDLD++ G +R + G GHNG+KSI
Sbjct: 63 PTTFMNNSGIAVKALLTYYNIA-IDDLIVIYDDLDMEVGKIRFRQRGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + + R++IGIGRP + +I HVLG F + + +D + ++ K +
Sbjct: 122 HIGSQEFDRIKIGIGRPQNGMTVINHVLGKFDKDDAITIDLTLDKVTDAVDFYLKEADFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQKYN 188
>gi|294673024|ref|YP_003573640.1| aminoacyl-tRNA hydrolase [Prevotella ruminicola 23]
gi|294472092|gb|ADE81481.1| aminoacyl-tRNA hydrolase [Prevotella ruminicola 23]
Length = 190
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 64/188 (34%), Positives = 91/188 (48%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHN GFM +D + K + ++E L G + IL+KP
Sbjct: 4 YLIVGLGNIGDEYENTRHNTGFMVLDAFAKASNI-HFDDKRYGFVAETSLKGRKVILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ +N + LVI DD+ L G RLK+ G + GHNGL I +
Sbjct: 63 STYMNLSGNAVRYWLNKENIEQ-SRLLVISDDVALPLGAFRLKSSGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G+NY RLR+GIG + VLG + + L P ID + +
Sbjct: 122 IGQNYARLRMGIGNDFPRGMQVDWVLGKYDEEDMKTLAPSIDTACEIIKSFVLAGIDITM 181
Query: 182 NHIVSVRK 189
N + K
Sbjct: 182 NQFNKLGK 189
>gi|240169902|ref|ZP_04748561.1| peptidyl-tRNA hydrolase [Mycobacterium kansasii ATCC 12478]
Length = 193
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 75/187 (40%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHA-EISEGQLDGLRTILIK 60
F+V GLGNPG Y RHN+GFM D + + K E+ G+L G +L K
Sbjct: 5 FLVVGLGNPGDTYARTRHNLGFMVADLLAARLGSKFKGHKRSGAEVVTGRLAGRAVVLAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ +MN SG+ + + FY + + +VIHDDLDLDFG +RLK GGG+ GHNGL+S++
Sbjct: 65 PRCYMNESGRQVGPLATFYSVAPA-DIVVIHDDLDLDFGRIRLKLGGGEGGHNGLRSVAA 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K+++R+RIGIGRPP VL NF++ ER + I + A + LL + +
Sbjct: 124 ALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTTAERAEVPTICEQAADATELLIEMGLET 183
Query: 180 FLNHIVS 186
N + +
Sbjct: 184 AQNRVHA 190
>gi|324991861|gb|EGC23784.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK405]
gi|324996249|gb|EGC28159.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK678]
gi|325698027|gb|EGD39908.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK160]
gi|327458485|gb|EGF04835.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK1]
gi|327471613|gb|EGF17056.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK408]
gi|327490343|gb|EGF22130.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK1058]
Length = 189
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM +D+I K F A+I+ L+G + +K
Sbjct: 3 KLIVGLGNPGEKYIETKHNVGFMLVDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + +KR++IGIGRP + ++ HVLG F + +L +D + ++ +
Sbjct: 122 HIGSQEFKRIKIGIGRPKEGTTVVHHVLGKFDKDDYIMILNTLDKVDNAVNYYLQSGNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QTMQKYN 188
>gi|300932603|ref|ZP_07147859.1| hypothetical protein CresD4_00920 [Corynebacterium resistens DSM
45100]
Length = 225
Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 63/185 (34%), Positives = 106/185 (57%), Gaps = 6/185 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH----FFPAWKKKFHAEISEGQLDGLRTI 57
+++ GLGNPG +Y RHN G++ +D + + A +K ++ I + ++ I
Sbjct: 35 WLIVGLGNPGDKYTTTRHNAGYLVVDELLADLLPAPGSLAQHRKTNSLICQSRIGETPVI 94
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L +P+T+MN SG + + F+K+P E +VI+D+LDLD +R++ GGGD GHNGL+S
Sbjct: 95 LARPRTYMNESGAPVANLAKFFKVP-AERVIVIYDELDLDPEKVRVRMGGGDHGHNGLRS 153
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
I++ G K Y R+ +GIGRPP + +VL FS E +L + + A + ++
Sbjct: 154 ITKALGTKEYVRIALGIGRPPGRMDVASYVLKPFSKAENAWLPIAVADAADATRACVQQG 213
Query: 177 DVSFL 181
+ +
Sbjct: 214 VEAGM 218
>gi|51473783|ref|YP_067540.1| peptidyl-tRNA hydrolase [Rickettsia typhi str. Wilmington]
gi|68052927|sp|Q68WD4|PTH_RICTY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|51460095|gb|AAU04058.1| Peptidyl-tRNA hydrolase [Rickettsia typhi str. Wilmington]
Length = 185
Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats.
Identities = 84/186 (45%), Positives = 118/186 (63%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG Y RHNIGF+ I+RI +H + K+KF+ +I+E +D + I
Sbjct: 1 MILVIGLGNPGIVYQYTRHNIGFIAIERIANKYHLSFSTKQKFNCKIAEAIIDRQKICFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + N E VIHDD+DL+ G ++ KTGG + GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVILVKTYYNI-NYEKVFVIHDDIDLEIGRIKFKTGGSNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y R+RIGIGRP + + +VL NFS E ++ IDN+A + L+ + +
Sbjct: 120 SIIGSHYNRIRIGIGRPQNNHDVADYVLSNFSESEYKTVMQSIDNVANNFGLILEHKLAE 179
Query: 180 FLNHIV 185
F N IV
Sbjct: 180 FKNKIV 185
>gi|15676693|ref|NP_273837.1| peptidyl-tRNA hydrolase [Neisseria meningitidis MC58]
gi|121634588|ref|YP_974833.1| peptidyl-tRNA hydrolase [Neisseria meningitidis FAM18]
gi|254804673|ref|YP_003082894.1| Peptidyl-tRNA hydrolase [Neisseria meningitidis alpha14]
gi|14195080|sp|Q9K029|PTH_NEIMB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229428|sp|A1KT53|PTH_NEIMF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|7226028|gb|AAF41208.1| peptidyl-tRNA hydrolase [Neisseria meningitidis MC58]
gi|120866294|emb|CAM10035.1| putative peptidyl-tRNA hydrolase [Neisseria meningitidis FAM18]
gi|254668215|emb|CBA04985.1| Peptidyl-tRNA hydrolase [Neisseria meningitidis alpha14]
gi|316983787|gb|EFV62768.1| peptidyl-tRNA hydrolase [Neisseria meningitidis H44/76]
gi|325131972|gb|EGC54671.1| peptidyl-tRNA hydrolase [Neisseria meningitidis M6190]
gi|325137803|gb|EGC60378.1| peptidyl-tRNA hydrolase [Neisseria meningitidis ES14902]
gi|325140052|gb|EGC62581.1| peptidyl-tRNA hydrolase [Neisseria meningitidis CU385]
gi|325200521|gb|ADY95976.1| peptidyl-tRNA hydrolase [Neisseria meningitidis H44/76]
Length = 192
Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG EY + RHN GF +D + +KKF E++ L L+K
Sbjct: 6 KMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARAALPDGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PATFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K G +Y RLR+GIG P D ++ +VL S+ R + + +++P + +
Sbjct: 125 KLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRRQIDDAVAKSLQAIPDILAGKWEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 ATRFLHS 191
>gi|57234607|ref|YP_181337.1| peptidyl-tRNA hydrolase [Dehalococcoides ethenogenes 195]
gi|119390932|sp|Q3Z8W2|PTH_DEHE1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|57225055|gb|AAW40112.1| peptidyl-tRNA hydrolase [Dehalococcoides ethenogenes 195]
Length = 189
Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 103/190 (54%), Gaps = 5/190 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY NRHN+GF C+ R + KK + G+++ +L K
Sbjct: 1 MKLIIGLGNPGKEYSGNRHNVGFQCLSRFAKDNHISFDKKCCLSRTGSGRINDEEIVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG++ +++ Y L + +V+ DDLDL G +RL+ GG GHNG+ SI
Sbjct: 61 PQTYMNLSGKAASQLLRRYNLK-AADIIVVQDDLDLPAGKIRLRLGGSAGGHNGISSIIT 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAH---IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G K + RL+IGIG+P + ++ HVLGNF ER + I + +L L
Sbjct: 120 DIGTKEFIRLKIGIGKPDSRNNGTEVVDHVLGNFGGEEREIMDKAITRASEALTCLLTFG 179
Query: 177 DVSFLNHIVS 186
+ N S
Sbjct: 180 LDTASNRFNS 189
>gi|153950891|ref|YP_001401047.1| peptidyl-tRNA hydrolase [Yersinia pseudotuberculosis IP 31758]
gi|167011998|sp|A7FIG9|PTH_YERP3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|152962386|gb|ABS49847.1| peptidyl-tRNA hydrolase [Yersinia pseudotuberculosis IP 31758]
Length = 196
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEESKFFGYTARLNLAGQDIRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 65 PATFMNLSGKAVAAMASFYRILP-EEILVAHDELDILPGMAKLKLGGGNGGHNGLKDIQN 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + + VLG + E+ + ID R +L
Sbjct: 124 KLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQTLIDNAIDESIRCTEVLLNEGMT 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 KAMNRLHAFK 193
>gi|237741390|ref|ZP_04571871.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 4_1_13]
gi|229430922|gb|EEO41134.1| peptidyl-tRNA hydrolase [Fusobacterium sp. 4_1_13]
Length = 191
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 69/183 (37%), Positives = 108/183 (59%), Gaps = 3/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNP +Y RHN+GF+ +D + ++KF A +SE +DG + I K
Sbjct: 1 MRVVIGLGNPDKKYERTRHNMGFIVVDSLRKKLNINDEREKFQALVSEKNIDGDKVIFFK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG +++E++NFYKL ++ +VI+DD+DL FG +R++ G GHNG+KSI
Sbjct: 61 PQTFMNLSGNAVIEIINFYKLDPKKDIIVIYDDMDLSFGDIRIREKGSSGGHNGIKSIIS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL-PLLAKREDVS 179
G+ + R++ GIG + HVLG F+ E+ L I++ + + +L +
Sbjct: 121 HIGEEFIRIKCGIG--AKEKDAVEHVLGEFNQTEQKELDEILEIVDNCVIEMLTVQNLDR 178
Query: 180 FLN 182
+
Sbjct: 179 IMQ 181
>gi|188591107|ref|YP_001795707.1| peptidyl-tRNA hydrolase [Cupriavidus taiwanensis LMG 19424]
gi|238692926|sp|B2AGT6|PTH_CUPTR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|170938001|emb|CAP62985.1| peptidyl-tRNA hydrolase [Cupriavidus taiwanensis LMG 19424]
Length = 198
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ + +FH + +L L+K
Sbjct: 3 KLIVGLGNPGAEYEATRHNAGFWLVDQLARMGGATLRVEGRFHGLAARARLWDQEVWLLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG +++ + FYK+ E +V+HD++DL G+ +LK GGG GHNGLK IS
Sbjct: 63 PSTFMNRSGLAVVSLARFYKILPDE-IVVVHDEMDLPAGSAKLKRGGGAGGHNGLKDISA 121
Query: 121 KCG-KNYKRLRIGIGRP--------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G ++Y RLR+G+G P ++ VL E+ + +D L L
Sbjct: 122 HLGTQDYWRLRLGVGHPRNAPGGAGAGREDVVNFVLKPPRREEQEAIDAALDRCIEPLGL 181
Query: 172 LAKREDVSFLNHIVSVR 188
LA+ + + + + R
Sbjct: 182 LARGDAERAMAQLHTAR 198
>gi|322386427|ref|ZP_08060056.1| aminoacyl-tRNA hydrolase [Streptococcus cristatus ATCC 51100]
gi|321269513|gb|EFX52444.1| aminoacyl-tRNA hydrolase [Streptococcus cristatus ATCC 51100]
Length = 189
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM +D++ K F AEI+ L+G + +K
Sbjct: 3 KLIVGLGNPGDKYFETKHNVGFMLVDKMCKELNLKFTADKIFQAEIASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++++ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIDDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + +KR++IGIGRP + +I HVLG F + +L +D + ++ L
Sbjct: 122 HIGTQEFKRVKIGIGRPKNNMSVIHHVLGKFDQEDYISILNTLDRVDSAVNHYLQTENFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QTMQQYN 188
>gi|159027229|emb|CAO89324.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 223
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 72/187 (38%), Positives = 108/187 (57%), Gaps = 5/187 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLD-GLRTILIK 60
++ GLGNP +Y RHNIGF +D + + K+F I+EG + L+K
Sbjct: 29 LIIGLGNPEPKYDRTRHNIGFEAVDSLARDWGLSWQENKRFQGFIAEGDGPFPGKIRLLK 88
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS+ V+++YKL E+ LVI+DD+DL G LR++ G GHNG+KS+
Sbjct: 89 PQTYMNRSGQSVRSVLDWYKLAP-ESILVIYDDMDLPLGRLRIRLSGSAGGHNGIKSMIA 147
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLRIGIG+ + A I HVLG F+ E +L ++D +++ L K+
Sbjct: 148 HVGTENFARLRIGIGKSSEKAT-ISHVLGRFTPQENEVILKVLDLSRKAIELGLKQGLQK 206
Query: 180 FLNHIVS 186
++ +
Sbjct: 207 AMSLYNN 213
>gi|167835374|ref|ZP_02462257.1| peptidyl-tRNA hydrolase [Burkholderia thailandensis MSMB43]
Length = 201
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN+GF +D++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNVGFWLVDQLAREAGTTLRDERRFHGLYAKARLFGDEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ + +F+KL E LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 63 PQTYMNRSGQSVVALAHFFKLLPNE-ILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESVRAGAKPDVANFVLKPPRKEEQDVIDAAIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P + K E + +
Sbjct: 182 PTIVKGETERAMMQLH 197
>gi|15602029|ref|NP_245101.1| peptidyl-tRNA hydrolase [Pasteurella multocida subsp. multocida
str. Pm70]
gi|13431784|sp|P57820|PTH_PASMU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|12720383|gb|AAK02248.1| Pth [Pasteurella multocida subsp. multocida str. Pm70]
Length = 194
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I+R+ FHF + KF + + ++G +
Sbjct: 5 KLIVGLGNPGDKYADTRHNAGEWLINRLARQFHFSLTPESKFSGKTARTVINGNEIRFLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LVIHD+LDL G ++K GGG GHNGL+
Sbjct: 65 PTTFMNLSGKAISSLANFYRIKP-EEILVIHDELDLPPGVAKIKQGGGHGGHNGLRDTIA 123
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G KN+ RLR+GIG P D + +VL S + + +D + +L K
Sbjct: 124 QLGNNKNFYRLRVGIGHPGDKNLVSAYVLNKPSLTDWQLIDKALDEATSCVDILIKDGIT 183
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 184 KATNRLNAFK 193
>gi|16124739|ref|NP_419303.1| peptidyl-tRNA hydrolase [Caulobacter crescentus CB15]
gi|221233454|ref|YP_002515890.1| peptidyl-tRNA hydrolase [Caulobacter crescentus NA1000]
gi|22095997|sp|Q9AAV9|PTH_CAUCR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783859|sp|B8GZU8|PTH_CAUCN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|13421661|gb|AAK22471.1| peptidyl-tRNA hydrolase [Caulobacter crescentus CB15]
gi|220962626|gb|ACL93982.1| peptidyl-tRNA hydrolase [Caulobacter crescentus NA1000]
Length = 205
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 71/191 (37%), Positives = 118/191 (61%), Gaps = 5/191 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL----DGLRT 56
M I+AGLGNP +Y +NRHN+GFM +D + W+ +F EGQ+ ++
Sbjct: 1 MLILAGLGNPEPKYEKNRHNVGFMAVDALARKWGTAPWRARFQGLACEGQVSTPDGPVKL 60
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L+KP+T+ N SG+++ E M F+KL + +V HD++D+ G R+K+GGG AG+NG++
Sbjct: 61 LLLKPKTYYNESGRAVGEAMKFFKL-QPTDVIVFHDEIDMAPGRFRMKSGGGAAGNNGIR 119
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
S++ + G ++R RIG+G P ++ +VLG+F E +L PI+D IA +LP A +
Sbjct: 120 SVTSQVGDAFRRGRIGVGHPGHKDAVMHYVLGDFHKVEHQWLDPILDAIADALPFAAVGD 179
Query: 177 DVSFLNHIVSV 187
D + ++ +
Sbjct: 180 DERYQAEVMRL 190
>gi|114561899|ref|YP_749412.1| peptidyl-tRNA hydrolase [Shewanella frigidimarina NCIMB 400]
gi|119391003|sp|Q087J1|PTH_SHEFN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|114333192|gb|ABI70574.1| peptidyl-tRNA hydrolase [Shewanella frigidimarina NCIMB 400]
Length = 195
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G + + P + K+ + L G L+
Sbjct: 5 KLIVGLANPGAEYAQTRHNAGAWYVQELARICNVPLVAESKYFGVTARATLHGRDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ + NF+++ E LV HD+LD+D G + K GGG GHNGLK I
Sbjct: 65 PTTYMNLSGKSVAALANFFRILP-EEILVAHDELDMDPGVAKFKLGGGHGGHNGLKDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G + + RLRIGIG P D + +VLG + E+ + ID RS +L ++
Sbjct: 124 SLGNDKNFHRLRIGIGHPGDKNKVSGYVLGRAPAVEQERINAAIDEAVRSTEILFNQDMA 183
Query: 179 SFLNHIVSVR 188
++ + S +
Sbjct: 184 KAMHRLHSFK 193
>gi|15899954|ref|NP_344558.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae TIGR4]
gi|111658625|ref|ZP_01409275.1| hypothetical protein SpneT_02000215 [Streptococcus pneumoniae
TIGR4]
gi|148984549|ref|ZP_01817837.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP3-BS71]
gi|148993580|ref|ZP_01823051.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP9-BS68]
gi|148997953|ref|ZP_01825466.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP11-BS70]
gi|168487225|ref|ZP_02711733.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CDC1087-00]
gi|168489340|ref|ZP_02713539.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP195]
gi|168576115|ref|ZP_02722020.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae MLV-016]
gi|169833645|ref|YP_001693439.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae Hungary19A-6]
gi|194397946|ref|YP_002036726.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae G54]
gi|225855740|ref|YP_002737251.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae P1031]
gi|225857814|ref|YP_002739324.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae 70585]
gi|307066641|ref|YP_003875607.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae AP200]
gi|21263855|sp|Q97TD1|PTH_STRPN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226709068|sp|B5E572|PTH_STRP4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238688350|sp|B1I6X7|PTH_STRPI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783889|sp|C1C986|PTH_STRP7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783893|sp|C1CN70|PTH_STRZP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|14971469|gb|AAK74198.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae TIGR4]
gi|147755963|gb|EDK63006.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP11-BS70]
gi|147923326|gb|EDK74440.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP3-BS71]
gi|147927801|gb|EDK78823.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP9-BS68]
gi|168996147|gb|ACA36759.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae Hungary19A-6]
gi|183569906|gb|EDT90434.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CDC1087-00]
gi|183572322|gb|EDT92850.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP195]
gi|183578086|gb|EDT98614.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae MLV-016]
gi|194357613|gb|ACF56061.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae G54]
gi|225721323|gb|ACO17177.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae 70585]
gi|225725567|gb|ACO21419.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae P1031]
gi|301799154|emb|CBW31666.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae OXC141]
gi|306408178|gb|ADM83605.1| Peptidyl-tRNA hydrolase [Streptococcus pneumoniae AP200]
gi|332071708|gb|EGI82201.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae GA17570]
Length = 189
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++++ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + R++IGIGRP + ++ HVL F + +L +D + S+ L ++
Sbjct: 122 HIGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDRDDYIGILQSVDKVDDSVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|189095922|pdb|2JRC|A Chain A, Solution Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis H37rv
Length = 204
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 72/189 (38%), Positives = 106/189 (56%), Gaps = 3/189 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHA-EISEGQLDGLRTILIK 60
+V GLGNPG Y RHN+GF+ D + + K E++ G+ G +L K
Sbjct: 5 LLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ +MN SG+ + + FY + N +VIHDDLDL+FG +RLK GGG+ GHNGL+S+
Sbjct: 65 PRCYMNESGRQIGPLAKFYSVAPA-NIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVA 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K+++R+RIGIGRPP VL NF+ ER + I + A + LL ++
Sbjct: 124 ALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEP 183
Query: 180 FLNHIVSVR 188
N + + +
Sbjct: 184 AQNRVHAWK 192
>gi|223936332|ref|ZP_03628244.1| Aminoacyl-tRNA hydrolase [bacterium Ellin514]
gi|223894850|gb|EEF61299.1| Aminoacyl-tRNA hydrolase [bacterium Ellin514]
Length = 197
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 4/186 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GF ++ + +KKF A ++ + +G R +L KP
Sbjct: 6 LIVGLGNPGSKYALTRHNVGFRLVECLAERWKASWVAEKKFDAMLARTERNGERILLCKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+++ + +FY+LP +V DD DL FG +R++ G GH+GL+SI +
Sbjct: 66 QTFMNASGETVGAMASFYRLPLP-QLVVAVDDADLPFGQIRMRANGSSGGHHGLESIEKH 124
Query: 122 CG-KNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + RLR+GIGR D I +VL FS E + +++ + +
Sbjct: 125 LGTREFARLRLGIGRAADDRREITDYVLAPFSGAEAKTVDKVLNTASDQIECWLDGGIQK 184
Query: 180 FLNHIV 185
++
Sbjct: 185 AMSQFN 190
>gi|309379373|emb|CBX21940.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 192
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG EY + RHN GF +D + +KKF E++ L L+K
Sbjct: 6 KMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARAALPDGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PATFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLR+GIG P D ++ +VL S+ R + + +++P + +
Sbjct: 125 RLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRRQIDDAVAKSLQAIPDILAGKWEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 ATRFLHS 191
>gi|167644634|ref|YP_001682297.1| peptidyl-tRNA hydrolase [Caulobacter sp. K31]
gi|167347064|gb|ABZ69799.1| Aminoacyl-tRNA hydrolase [Caulobacter sp. K31]
Length = 208
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 115/188 (61%), Gaps = 5/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL----DGLRT 56
M I+AGLGNP +Y +NRHN+GFM +D + W+ +F EGQ+ ++
Sbjct: 3 MLILAGLGNPEPKYEKNRHNVGFMAVDALARKWGVAPWRSRFQGLACEGQVSTPNGPVKL 62
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L+KP+TF N SG+++ E M F+KL + + +V HD++D+ G R+K GGG AG+NG++
Sbjct: 63 LLLKPKTFYNESGRAVGEAMKFFKL-SPADVIVFHDEIDMAPGRFRMKAGGGAAGNNGVR 121
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
SI+ + G ++R RIG+G P ++ +VLG+F E +L P++D + +LP A +
Sbjct: 122 SITSQIGDGFRRGRIGVGHPGHKDAVMHYVLGDFHKVEHQWLDPLLDAVCDALPFAAAGD 181
Query: 177 DVSFLNHI 184
D + +
Sbjct: 182 DERYQAEV 189
>gi|312884090|ref|ZP_07743803.1| peptidyl-tRNA hydrolase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368260|gb|EFP95799.1| peptidyl-tRNA hydrolase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 196
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 90/190 (47%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G ++ + H KF +DG L+
Sbjct: 6 KLLVGLANPGPEYTRTRHNAGAWVVEELARNHNVLLKNDSKFFGLTGRIMIDGQDLRLLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ + FY++ E ++ HD+LDL G + K GGG GHNGLK
Sbjct: 66 PTTYMNLSGKSVAAMAKFYQIKP-EEIMIAHDELDLPPGIAKFKKGGGHGGHNGLKDTIS 124
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K K++ RLRIGIG P + VLG E+ L D R + +L K
Sbjct: 125 KLANCKDFYRLRIGIGHPGHKDRVAGFVLGKAPEKEQALLDAATDESVRCIDILLKDGLA 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 RAQNRLHTFK 194
>gi|262369400|ref|ZP_06062728.1| peptidyl-tRNA hydrolase [Acinetobacter johnsonii SH046]
gi|262315468|gb|EEY96507.1| peptidyl-tRNA hydrolase [Acinetobacter johnsonii SH046]
Length = 193
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 100/187 (53%), Gaps = 2/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF ++R+ + K KF+ G ++G L+ P
Sbjct: 6 LIVGLGNPGSEYAQTRHNAGFWFVERLAEQYGITLKKDPKFNGMSGRGNIEGQDVRLLLP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNL G+S++ FY + + L+ HD+LD++ G +RLKTGGG GHNGL+ I
Sbjct: 66 TTFMNLVGKSVVPFAKFYNIAP-DAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPH 124
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N+ RLRIGIG P + HVL S E+ + I + +L E +
Sbjct: 125 IGPNFHRLRIGIGHPGSKERVSGHVLSKAPSNEQNLMDDAIHHALARTKMLVNGEIQPAM 184
Query: 182 NHIVSVR 188
N I + +
Sbjct: 185 NQINAYK 191
>gi|296161526|ref|ZP_06844331.1| peptidyl-tRNA hydrolase [Burkholderia sp. Ch1-1]
gi|295888170|gb|EFG67983.1| peptidyl-tRNA hydrolase [Burkholderia sp. Ch1-1]
Length = 200
Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLVDQLAREAGTTLRDERRFHGFYAKARLHGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ V F+K+ E LV HD+LD+ G+++LK GGG GHNGLK I+
Sbjct: 63 PQTYMNRSGQSVVAVAQFFKILPDE-ILVAHDELDMPPGSVKLKLGGGSGGHNGLKDITA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + +VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANYVLKPPRREEQDVIDASIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P + K E + +
Sbjct: 182 PQVIKGELERAMMQLH 197
>gi|306826191|ref|ZP_07459526.1| aminoacyl-tRNA hydrolase [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304431667|gb|EFM34648.1| aminoacyl-tRNA hydrolase [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 189
Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 107/187 (57%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID+I K F A+++ L+G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQIAKKQNVTFTHDKIFQADLASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAIHALLTYYGL-DIEDLLVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + R++IGIGRP ++ HVL F +L ID + ++ L ++
Sbjct: 122 HIGTQVFNRIKIGIGRPQKGMSVVHHVLSKFDQENYVGILQSIDKVDDAVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|294142161|ref|YP_003558139.1| peptidyl-tRNA hydrolase [Shewanella violacea DSS12]
gi|293328630|dbj|BAJ03361.1| peptidyl-tRNA hydrolase [Shewanella violacea DSS12]
Length = 194
Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y + RHN G + + K++ + L G L+
Sbjct: 5 KLIVGLANPGEKYAQTRHNAGAWYVQELARICGATLIADSKYYGLTARVSLHGKDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 65 PSTFMNLSGKSVGAMANFFRIQAGE-ILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G + + RLRIGIG P D + +VLG + E+ + P++D RS +L +
Sbjct: 124 SLGNDKGFHRLRIGIGHPGDRNQVSNYVLGKAPAVEQTQIEPVLDEAVRSTQILFTEDMA 183
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 184 KAMNRLHSFK 193
>gi|33864807|ref|NP_896366.1| peptidyl-tRNA hydrolase [Synechococcus sp. WH 8102]
gi|46576729|sp|Q7U9I5|PTH_SYNPX RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|33632330|emb|CAE06786.1| putative peptidyl-tRNA hydrolase (PTH) [Synechococcus sp. WH 8102]
Length = 203
Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats.
Identities = 68/192 (35%), Positives = 105/192 (54%), Gaps = 8/192 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHNIGFM ++++ S F + K H ++E + R L+ P
Sbjct: 7 LVVGLGNPGTKYEGTRHNIGFMALEQMASREGFSFRQQSKLHGLVAEHGIGESRLRLLMP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+S+ ++++ E LV+ DD+D+ G LRL+ G GHNGL+S +
Sbjct: 67 QTYMNDSGRSIRAALDWFGFTP-EQLLVLVDDMDIPLGRLRLRGQGSAGGHNGLRSTIQH 125
Query: 122 CGKN-YKRLRIGIGRPPD-----TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G + RLRIGIG P D A + HVLG+FS E+ + ++D + ++ + ++
Sbjct: 126 LGTQAFPRLRIGIGAPADNPAERRARTVSHVLGSFSRAEQPEVDVVLDGVLEAIQRIQRQ 185
Query: 176 EDVSFLNHIVSV 187
N I
Sbjct: 186 GLDRAGNWINGF 197
>gi|295687988|ref|YP_003591681.1| peptidyl-tRNA hydrolase [Caulobacter segnis ATCC 21756]
gi|295429891|gb|ADG09063.1| peptidyl-tRNA hydrolase [Caulobacter segnis ATCC 21756]
Length = 206
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 70/191 (36%), Positives = 117/191 (61%), Gaps = 5/191 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL----DGLRT 56
M I+AGLGNP +Y +NRHN+GFM +D + W+ +F EGQ+ ++
Sbjct: 1 MLILAGLGNPEPKYEKNRHNVGFMAVDALARKWGTAPWRARFQGLACEGQVSTPDGPVKL 60
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L+KP+T+ N SG+++ E M F+KL + +V HD++D+ G R+K GGG AG+NG++
Sbjct: 61 LLLKPKTYYNESGRAVGEAMKFFKLKPA-DVIVFHDEIDMAPGRFRMKAGGGAAGNNGIR 119
Query: 117 SISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
S++ + G ++R RIG+G P ++ +VLG+F E +L P++D IA +LP A +
Sbjct: 120 SVTSQVGDAFRRGRIGVGHPGHKDAVMHYVLGDFHKVEHQWLDPMLDAIADALPFAAVGD 179
Query: 177 DVSFLNHIVSV 187
D + ++ +
Sbjct: 180 DERYQAEVMRL 190
>gi|170024417|ref|YP_001720922.1| peptidyl-tRNA hydrolase [Yersinia pseudotuberculosis YPIII]
gi|169750951|gb|ACA68469.1| Aminoacyl-tRNA hydrolase [Yersinia pseudotuberculosis YPIII]
Length = 206
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G +D + H + KF + L G L+
Sbjct: 15 KLIVGLANPGAEYAQTRHNAGAWYVDLLAERHNQSLKEESKFFGYTARLNLAGQDIRLLV 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E LV HD+LD+ G +LK GGG+ GHNGLK I
Sbjct: 75 PATFMNLSGKAVAAMASFYRILP-EEILVAHDELDILPGMAKLKLGGGNGGHNGLKDIQN 133
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D + + VLG + E+ + ID R +L
Sbjct: 134 KLGNNPNFYRLRIGIGHPGDKSKVTGFVLGKPPASEQTLIDNAIDESIRCTEVLLNEGMT 193
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 194 KAMNRLHAFK 203
>gi|315222839|ref|ZP_07864724.1| peptidyl-tRNA hydrolase [Streptococcus anginosus F0211]
gi|315188075|gb|EFU21805.1| peptidyl-tRNA hydrolase [Streptococcus anginosus F0211]
Length = 189
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E RHN+GFM ID++ K F AEI+ G + +K
Sbjct: 3 KMIVGLGNPGEKYFETRHNVGFMLIDKMCKEQNLKFTTDKIFQAEIASTFFYGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++++Y L ++E+ +VI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLSYYGL-DIEDLVVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + +KR++IGIGRP + II HVLG FS + +L I+D + ++ +
Sbjct: 122 HIGTQEFKRIKIGIGRPENNITIIHHVLGKFSKGDYAIILNILDKVDSAVNYYLQSNNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QTMQQYN 188
>gi|6714302|gb|AAF25998.1|AC013354_17 F15H18.8 [Arabidopsis thaliana]
Length = 777
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 61/160 (38%), Positives = 84/160 (52%), Gaps = 20/160 (12%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF +D + F A +G + + +L KP
Sbjct: 95 WLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKP 154
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ +DDLDL FG LRL GG GHNG++SI ++
Sbjct: 155 QTFMNLSGESV------------------YDDLDLPFGKLRLLPKGGHGGHNGMRSIIDR 196
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL 159
+++ RLRIGIGRPP VL F+ E+ L
Sbjct: 197 LKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELD 236
>gi|319940212|ref|ZP_08014565.1| peptidyl-tRNA hydrolase [Streptococcus anginosus 1_2_62CV]
gi|319810683|gb|EFW07013.1| peptidyl-tRNA hydrolase [Streptococcus anginosus 1_2_62CV]
Length = 189
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 111/187 (59%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E RHN+GFM +D++ K F AEI+ +G + +K
Sbjct: 3 KMIVGLGNPGEKYFETRHNVGFMLVDKMCKEKSLKFTTDKIFQAEIASTFFNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++++Y L ++E+ +VI+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLSYYGL-DIEDLVVIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G + +KR++IGIGRP + II HVLG FS + +L +D I ++ + +
Sbjct: 122 HIGTQEFKRIKIGIGRPENNITIIHHVLGKFSKGDHAIILNTLDKIDSAVNYYLQSDNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QTMQQYN 188
>gi|91781711|ref|YP_556917.1| peptidyl-tRNA hydrolase [Burkholderia xenovorans LB400]
gi|119390921|sp|Q145X4|PTH_BURXL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|91685665|gb|ABE28865.1| peptidyl-tRNA hydrolase [Burkholderia xenovorans LB400]
Length = 200
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 66/196 (33%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLVDQLAREAGTTLRDERRFHGFYAKARLHGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ + F+K+ E LV HD+LD+ G+++LK GGG GHNGLK I+
Sbjct: 63 PQTYMNRSGQSVVALAQFFKILPDE-ILVAHDELDMPPGSVKLKLGGGSGGHNGLKDITA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + +VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGARPDVANYVLKPPRREEQDVIDASIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P + K E + +
Sbjct: 182 PQVIKGELERAMMQLH 197
>gi|161506854|ref|YP_001576808.1| peptidyl-tRNA hydrolase [Lactobacillus helveticus DPC 4571]
gi|172048360|sp|A8YXI6|PTH_LACH4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|160347843|gb|ABX26517.1| Peptidyl-trna hydrolase_290 [Lactobacillus helveticus DPC 4571]
Length = 185
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y + +HN GFM +D + K KF ++ +++G IL++
Sbjct: 1 MKIIAGLGNPGQKYDKTKHNTGFMTLDHYLNEKGLSLDKDKFEGHWTKQKINGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++ NF+K+ E+ L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNESGRSVSQIANFFKVAP-EDVLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGI P +T ++ VL F+ ++ + D + + D
Sbjct: 120 DLGTEKFNRLKIGIRHPKNT-TVVSWVLTPFNDEQQKLMDDAFDTSVKIIDDFIAGRDSQ 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNKYN 185
>gi|298368592|ref|ZP_06979910.1| aminoacyl-tRNA hydrolase [Neisseria sp. oral taxon 014 str. F0314]
gi|298282595|gb|EFI24082.1| aminoacyl-tRNA hydrolase [Neisseria sp. oral taxon 014 str. F0314]
Length = 191
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++AGLGNPG EY + RHN GF +D + +KKF E++ L L+K
Sbjct: 5 KLIAGLGNPGREYEQTRHNAGFWFLDELAWQWKASFKDEKKFFGEVARVGLPDGDVWLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 65 PMTFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 123
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLR+GI P D ++ +VL S+ R + I ++P + E
Sbjct: 124 RLGTPDYYRLRLGIDHPGDRNLVVGYVLNKPSAEHRRQIDDAIRKSLEAMPAILAGEWEE 183
Query: 180 FLNHIVS 186
+ + S
Sbjct: 184 AVRFLHS 190
>gi|90581722|ref|ZP_01237509.1| peptidyl-tRNA hydrolase [Vibrio angustum S14]
gi|90437076|gb|EAS62280.1| peptidyl-tRNA hydrolase [Vibrio angustum S14]
Length = 196
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G ++ + H K+ +G L+ P
Sbjct: 7 LLVGLANPGQEYANTRHNAGAWVVEELARVHNVSLRPDPKYFGLTGRITANGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + NF+++ E LV HD+LDL G + K GGG GHNGL+ I K
Sbjct: 67 STFMNLSGKSVAALANFFQIKP-EEILVAHDELDLPPGVAKFKKGGGHGGHNGLRDIISK 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLRI IG P D + +VLG + E+ + +D R + +L K
Sbjct: 126 MGNNKDFYRLRIAIGHPGDKNKVAGYVLGKAPAKEQELIDAAVDESVRCIDILLKDGLTK 185
Query: 180 FLNHIVSVR 188
N + + +
Sbjct: 186 AQNRLHTFK 194
>gi|119505829|ref|ZP_01627895.1| peptidyl-tRNA hydrolase [marine gamma proteobacterium HTCC2080]
gi|119458327|gb|EAW39436.1| peptidyl-tRNA hydrolase [marine gamma proteobacterium HTCC2080]
Length = 200
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 66/188 (35%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN G ++ + + KF+ + + G L++P
Sbjct: 6 LIVGLGNPGKSYEGTRHNAGAFFVEELARQCSSALTTESKFNGDTARINFAGHDLRLLRP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ + NFY++ E L+ HD+LD+ GT R K GGG GHNGL+ I
Sbjct: 66 STFMNKSGLAVAALANFYRIAP-EAILIAHDELDITPGTARFKQGGGHGGHNGLRDIIPA 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + RLR+GIG P + + +VL S +R + I+D SLPLL + + V
Sbjct: 125 LGGNREFHRLRVGIGHPGHASEVSNYVLAKPSKADRQAIDAIVDEAVASLPLLLEGDAVK 184
Query: 180 FLNHIVSV 187
+ + SV
Sbjct: 185 AMTRLHSV 192
>gi|167561484|ref|ZP_02354400.1| peptidyl-tRNA hydrolase [Burkholderia oklahomensis EO147]
gi|167568714|ref|ZP_02361588.1| peptidyl-tRNA hydrolase [Burkholderia oklahomensis C6786]
Length = 201
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 67/196 (34%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLHGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQ+++ + +F+K+ E LV HD+LDL G ++LK GGG GHNGLK IS
Sbjct: 63 PQTYMNRSGQAVVALAHFFKILPDE-ILVAHDELDLPPGAVKLKLGGGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRKEEQDVIDAAIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P + K E + +
Sbjct: 182 PTVVKGEIERAMMQLH 197
>gi|54026867|ref|YP_121109.1| peptidyl-tRNA hydrolase [Nocardia farcinica IFM 10152]
gi|68052906|sp|Q5YPZ6|PTH_NOCFA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54018375|dbj|BAD59745.1| putative peptidyl-tRNA hydrolase [Nocardia farcinica IFM 10152]
Length = 193
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 75/185 (40%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG EY RHN+GF+ D + A KK A++ + +LDG + ++ KP
Sbjct: 10 LVVGLGNPGSEYERTRHNVGFLVADVLAERVGDRFAVHKKSGADLLQARLDGRQVLIAKP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+++MNLSG+ + + F+ +P E +V+HD+LDL FG +RLK GGG+ GHNGL+SIS
Sbjct: 70 RSYMNLSGRPVAALARFFSVPPTE-VIVVHDELDLPFGAVRLKRGGGEGGHNGLRSISSA 128
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
K+Y R RIGIGRPP VL F++ ER + I++ A ++ LL + +
Sbjct: 129 LTTKDYLRTRIGIGRPPGRQDPADFVLKPFAAAERKEVPVIVEQAADAVELLLRVGLEAA 188
Query: 181 LNHIV 185
N +
Sbjct: 189 QNQLH 193
>gi|152997608|ref|YP_001342443.1| peptidyl-tRNA hydrolase [Marinomonas sp. MWYL1]
gi|189038155|sp|A6W1C9|PTH_MARMS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|150838532|gb|ABR72508.1| Aminoacyl-tRNA hydrolase [Marinomonas sp. MWYL1]
Length = 194
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 100/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G I+ + +KKF + + + G L+ P
Sbjct: 6 LLVGLGNPGSEYENTRHNAGAQWIEALARQSQCSLRSEKKFFGQFGKVYIAGEECYLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ V FYK+P E LVIHD+LD+ GT +LK GGG GHNGLK I K
Sbjct: 66 TTYMNLSGKAVQAVCQFYKIPP-EEVLVIHDELDIPPGTAKLKQGGGHGGHNGLKDIISK 124
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RLRIGIG P + + +VL + + + ID R + + + +
Sbjct: 125 LANNREFGRLRIGIGHPGHASQVANYVLKKAAPDDYTKIEQAIDESLRYVDDIVRGNLNA 184
Query: 180 FLNHIVSVR 188
+N + S +
Sbjct: 185 VMNQLHSFK 193
>gi|326796207|ref|YP_004314027.1| peptidyl-tRNA hydrolase [Marinomonas mediterranea MMB-1]
gi|326546971|gb|ADZ92191.1| Peptidyl-tRNA hydrolase [Marinomonas mediterranea MMB-1]
Length = 194
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 73/190 (38%), Positives = 104/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN G I+ + +KKF E ++ + G L+
Sbjct: 5 KLLVGLGNPGSEYENTRHNAGAQWIEALARQSQCSLRSEKKFFGEFAKAYIGGEECYLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ V FYK+ E LVIHD+LD+ GT++LK GGG GHNGLK I
Sbjct: 65 PTTYMNLSGKSVQAVCQFYKILP-EQVLVIHDELDIPPGTVKLKKGGGHGGHNGLKDIIS 123
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G +++ RLRIGIG P + + +VL + E + ID R + + E
Sbjct: 124 KLGNNRDFGRLRIGIGHPGHASQVASYVLKKAPTEEYDQIEKTIDESLRYCDDIVRGELS 183
Query: 179 SFLNHIVSVR 188
+ +NH+ S +
Sbjct: 184 NAMNHLHSFK 193
>gi|296392943|ref|YP_003657827.1| peptidyl-tRNA hydrolase [Segniliparus rotundus DSM 44985]
gi|296180090|gb|ADG96996.1| peptidyl-tRNA hydrolase [Segniliparus rotundus DSM 44985]
Length = 186
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEIS-EGQLDGLRTILIKP 61
++AGLGNPG +Y + RHN+G M +D + + K ++ G IL KP
Sbjct: 1 MIAGLGNPGPKYEKTRHNVGHMVVDLLLARAGGSLRAHKTSGMLAARLSFHGRGVILGKP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+MN+ G + ++ ++ +P + + +HD+LD+ FG +RLK GGG+AGHNGL+S+S
Sbjct: 61 TAYMNVCGPQIAKLAKYFSVP-AADVVAVHDELDIGFGLVRLKRGGGEAGHNGLRSLSSS 119
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G K Y R+R+G+GRPP VL F + ER L +++ A ++ L + +
Sbjct: 120 LGTKEYCRVRVGVGRPPVGTQTADFVLAGFRADERKELPGLLERSADAVEALVREGLEAA 179
Query: 181 LNHIVSV 187
N + S
Sbjct: 180 QNRVHSA 186
>gi|30249778|ref|NP_841848.1| peptidyl-tRNA hydrolase [Nitrosomonas europaea ATCC 19718]
gi|46576780|sp|Q82TQ6|PTH_NITEU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|30180815|emb|CAD85735.1| Peptidyl-tRNA hydrolase [Nitrosomonas europaea ATCC 19718]
Length = 195
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 102/186 (54%), Gaps = 3/186 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHN+GF +DR+ S + +F + L L+KP
Sbjct: 7 LVVGLGNPGEKYASTRHNVGFDWLDRLASSQRVAFTLETRFRGLCARIMLADTDIWLLKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG S+ V +YK+ E LV+HD+LDL G ++LK+GGG GHNGLKSI
Sbjct: 67 QTYMNASGMSVAAVCRYYKIVP-EQMLVVHDELDLQPGVIKLKSGGGTGGHNGLKSIVAD 125
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ RLRIG+G P D ++ +VL E + ID+ + PL+A+ + +
Sbjct: 126 LSSQVFWRLRIGVGHPGDRNQVVDYVLHPPRREEAALIDEAIDHSMQVWPLIARGDFAAA 185
Query: 181 LNHIVS 186
+ + +
Sbjct: 186 MQRLHT 191
>gi|296125816|ref|YP_003633068.1| peptidyl-tRNA hydrolase [Brachyspira murdochii DSM 12563]
gi|296017632|gb|ADG70869.1| peptidyl-tRNA hydrolase [Brachyspira murdochii DSM 12563]
Length = 205
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 68/182 (37%), Positives = 104/182 (57%), Gaps = 3/182 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY NRHN+GF+ ID+I K + + G+ + IL+KP
Sbjct: 4 KLIIGLGNPGDEYKNNRHNVGFILIDKIAENLSLNFDTNKKKSLYTRGKSKDIEYILLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S + + F+ + ++ +VI+DD+D+ FGT ++K GG GHNG+KS+ +
Sbjct: 64 QTFMNLSGESAIYISKFFNVKT-DDIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLIAQ 122
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII-DNIARSLPLLAKREDVS 179
++ R+RIGIGRP + +VL NFS E L +I DN+ ++ +
Sbjct: 123 LHSDDFTRIRIGIGRPNAGKKVNDYVLSNFSKKEMEELNTVIADNVIEAVKTALFESPII 182
Query: 180 FL 181
Sbjct: 183 AQ 184
>gi|237752464|ref|ZP_04582944.1| peptidyl-tRNA hydrolase [Helicobacter winghamensis ATCC BAA-430]
gi|229375953|gb|EEO26044.1| peptidyl-tRNA hydrolase [Helicobacter winghamensis ATCC BAA-430]
Length = 204
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 81/189 (42%), Positives = 114/189 (60%), Gaps = 8/189 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
MF++ GLGNPG +Y NRHNIGF ID + S + K F E+ + + +L+
Sbjct: 1 MFLIVGLGNPGQKYQNNRHNIGFRVIDSLVQSLNAVKQSAKDFQGELYK----SSQMLLL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQTFMNLSG+S+ V+NFYK+ ++L+IHDDLDL FG ++ K GG GHNGLKSI
Sbjct: 57 KPQTFMNLSGKSVQSVLNFYKIT---DFLIIHDDLDLPFGAIKFKFGGSSGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG Y R+R GIG+P + +I VL +F++ E +I + A + +AK E
Sbjct: 114 TLCGNAYYRIRYGIGKPTIKSQVIDWVLQDFNTTEEAHNQNLITHSANAALEIAKLESSD 173
Query: 180 FLNHIVSVR 188
L+ +S +
Sbjct: 174 NLSSQISSK 182
>gi|260102335|ref|ZP_05752572.1| aminoacyl-tRNA hydrolase [Lactobacillus helveticus DSM 20075]
gi|260083844|gb|EEW67964.1| aminoacyl-tRNA hydrolase [Lactobacillus helveticus DSM 20075]
gi|328463459|gb|EGF35110.1| peptidyl-tRNA hydrolase [Lactobacillus helveticus MTCC 5463]
Length = 185
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y + +HN GFM +D + K KF ++ +++G IL++
Sbjct: 1 MKIIAGLGNPGQKYDKTKHNTGFMTMDHYLNEKGLSLDKDKFEGHWTKQKINGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++ NF+K+ E+ L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNESGRSVSQIANFFKVAP-EDVLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGI P +T ++ VL F+ ++ + D + + D
Sbjct: 120 DLGTEKFNRLKIGIRHPKNT-TVVSWVLTPFNDEQQKLMDDAFDTSVKIIDDFITGRDSQ 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNKYN 185
>gi|170078845|ref|YP_001735483.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 7002]
gi|169886514|gb|ACB00228.1| peptidyl-tRNA hydrolase [Synechococcus sp. PCC 7002]
Length = 206
Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 104/184 (56%), Gaps = 5/184 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNP +Y RHNIGF +DR+ + +KF +E + +G + L+KP
Sbjct: 12 LIVGLGNPEPKYDHTRHNIGFEFVDRLAADWGATLQDHRKFQGVWAEVRRNGQKLGLLKP 71
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQSL V+++YK+P E+ LV++DD+DL G LRL+ G GHNG+KSI
Sbjct: 72 TTYMNRSGQSLRAVIDWYKIPP-ESVLVVYDDMDLPLGRLRLRLQGSAGGHNGIKSIISH 130
Query: 122 CG-KNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G + + RLRIGIG+ I HVLG F+ E+ L ++ +L L +
Sbjct: 131 LGTQKFPRLRIGIGKTQLKGDRPTISHVLGKFAPAEKPILNDVLGLAEEALALSLREGVE 190
Query: 179 SFLN 182
++
Sbjct: 191 KAMS 194
>gi|289704879|ref|ZP_06501296.1| aminoacyl-tRNA hydrolase [Micrococcus luteus SK58]
gi|289558375|gb|EFD51649.1| aminoacyl-tRNA hydrolase [Micrococcus luteus SK58]
Length = 191
Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 104/186 (55%), Gaps = 4/186 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQ--LDGLRTILIK 60
++ GLGNPG EY RHN+G M D + S + + A ++ G+ + G R +L K
Sbjct: 7 LIVGLGNPGSEYERTRHNVGQMVADELASRMGVGFTRHRAGAVVATGRLGIGGPRVVLAK 66
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
+MN+SG+ + + +FY + E+ +V+HD+LD+ F TLRLK GGG+ GHNGLKSI+
Sbjct: 67 STGYMNVSGRPVSALASFYGIGP-EDLVVVHDELDIPFDTLRLKRGGGEGGHNGLKSITA 125
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K+Y R+R+GIGRPP + VL F+ PE+ L +D A ++ L
Sbjct: 126 SLGTKDYARVRVGIGRPPGRMDVADFVLRPFTKPEQDVLPLHVDRAADAVEKLVTDGLEP 185
Query: 180 FLNHIV 185
Sbjct: 186 AQQAFH 191
>gi|281420708|ref|ZP_06251707.1| aminoacyl-tRNA hydrolase [Prevotella copri DSM 18205]
gi|281405481|gb|EFB36161.1| aminoacyl-tRNA hydrolase [Prevotella copri DSM 18205]
Length = 190
Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats.
Identities = 67/188 (35%), Positives = 93/188 (49%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GFM +D ++ K + ++E L G + L+KP
Sbjct: 4 YLICGLGNPGDEYAGTRHNTGFMVLDAFAKASNI-HFEDKRYGFVAETTLKGRKIFLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N K+ LVI D+L L G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNQEKIDQ-SRLLVISDELALPLGAFRLKANGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G+NY RLR+GIG I VLG ++ + L P ID + +
Sbjct: 122 IGQNYARLRMGIGNDYPRGGQIDWVLGKYTEEDMKQLQPAIDLGVEIIKSFVLAGIDITM 181
Query: 182 NHIVSVRK 189
N + K
Sbjct: 182 NQYNKLGK 189
>gi|187927355|ref|YP_001897842.1| peptidyl-tRNA hydrolase [Ralstonia pickettii 12J]
gi|309779944|ref|ZP_07674698.1| aminoacyl-tRNA hydrolase [Ralstonia sp. 5_7_47FAA]
gi|238691838|sp|B2UER4|PTH_RALPJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|187724245|gb|ACD25410.1| Aminoacyl-tRNA hydrolase [Ralstonia pickettii 12J]
gi|308921303|gb|EFP66946.1| aminoacyl-tRNA hydrolase [Ralstonia sp. 5_7_47FAA]
Length = 200
Score = 220 bits (562), Expect = 6e-56, Method: Composition-based stats.
Identities = 67/198 (33%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ + +FH + L G L++
Sbjct: 3 KLIVGLGNPGAEYAATRHNAGFWLVDQLARMGNVTLRNETRFHGYAARANLWGNEVWLLQ 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG + + + FYK+ E LV+HD+LDL GT++LK GGG GHNGLK I+
Sbjct: 63 PQTFMNRSGLATVALARFYKVMPDE-ILVVHDELDLPPGTVKLKLGGGSGGHNGLKDIAA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ + RLR+GIG P + VL E+ + ID +L
Sbjct: 122 HLTTQQFWRLRLGIGHPRNLLPPGTAASGQHDVANFVLKAPRKEEQDLIDRAIDQSLDAL 181
Query: 170 PLLAKREDVSFLNHIVSV 187
P L + + +
Sbjct: 182 PELIAGNAEKAMMRLHTA 199
>gi|325129973|gb|EGC52772.1| peptidyl-tRNA hydrolase [Neisseria meningitidis OX99.30304]
Length = 192
Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D + +KKF E++ L L+K
Sbjct: 6 KMLVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARATLPDGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PTTFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K G +Y RLR+GIG P D ++ +VL S+ R + + +++P + +
Sbjct: 125 KLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRRQIDDAVAKSLQAIPDILADKCEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 ATRFLHS 191
>gi|115378676|ref|ZP_01465826.1| peptidyl-tRNA hydrolase [Stigmatella aurantiaca DW4/3-1]
gi|310823077|ref|YP_003955435.1| peptidyl-tRNA hydrolase [Stigmatella aurantiaca DW4/3-1]
gi|115364342|gb|EAU63427.1| peptidyl-tRNA hydrolase [Stigmatella aurantiaca DW4/3-1]
gi|309396149|gb|ADO73608.1| Peptidyl-tRNA hydrolase [Stigmatella aurantiaca DW4/3-1]
Length = 191
Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY +RHNIGFM ++ + S ++KF A + +G + G R + ++
Sbjct: 1 MKLICGLGNPGREYERHRHNIGFMVVEALLSRARAELNQEKFQARVGQGSVGGERVLFLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+SL + FYK+ +E+ LVIHD+LDL FG L+LK GGG GHNGLKS +
Sbjct: 61 PQTYMNLSGRSLADAARFYKIA-VEDILVIHDELDLPFGRLQLKAGGGTGGHNGLKSSVQ 119
Query: 121 KCGKN-YKRLRIGIGRPPD---TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G + + RLR GIG+P + +VL +F ER L I + + +
Sbjct: 120 CLGADGFIRLRFGIGKPEGPNAKERVAGYVLSSFDDGERRQLEEFIGRASDMAEVWVREG 179
Query: 177 DVSFLNHIV 185
+N
Sbjct: 180 LAVAMNRFN 188
>gi|283768628|ref|ZP_06341540.1| aminoacyl-tRNA hydrolase [Bulleidia extructa W1219]
gi|283105020|gb|EFC06392.1| aminoacyl-tRNA hydrolase [Bulleidia extructa W1219]
Length = 190
Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHN GF+ +D + + K++A IS+ ++ + IL+K
Sbjct: 1 MKLIVGLGNPGKKYEQTRHNSGFLVMDALAHLCHTNISQNKWNALISQVRIGAEQVILMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG ++ +V +FYK+ LE+ LVIHDD+DL G+LR++ G G G+KSI +
Sbjct: 61 PQTFMNESGIAVRQVFDFYKMA-LEDILVIHDDMDLKVGSLRIRQKGSSGGQKGMKSIQQ 119
Query: 121 KCGKNY-KRLRIGIGRPPDT--AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
R+R+G+G + VL + E+ I+ A++
Sbjct: 120 HLNSQMIARIRVGVGHSEKGVHEKVPDWVLSSVFPEEKAIFQQTIEQAAKACYEWVNEPM 179
Query: 178 VSFLNHIV 185
+N
Sbjct: 180 DLVMNRFN 187
>gi|118465371|ref|YP_880401.1| peptidyl-tRNA hydrolase [Mycobacterium avium 104]
gi|166227336|sp|A0QBW3|PTH_MYCA1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118166658|gb|ABK67555.1| peptidyl-tRNA hydrolase [Mycobacterium avium 104]
Length = 191
Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHA-EISEGQLDGLRTILIK 60
+V GLGNPG Y RHN+GFM D + + K EI G+L G ++ K
Sbjct: 5 LLVVGLGNPGDNYARTRHNVGFMVADLLAARMGSKFKAHKRSGAEIVSGRLAGRSVVVAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ +MN SG+ + + FY +P + +VIHDDLDLDFG +RLK GGG+ GHNGL+S+S
Sbjct: 65 PRCYMNESGRQVGPLAKFYSVPPG-DIIVIHDDLDLDFGRIRLKIGGGEGGHNGLRSVSN 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K+++R+RIGIGRPP VL NF+S ER + I + A + LL +
Sbjct: 124 ALGSKDFQRVRIGIGRPPGRKDPAAFVLENFTSTERADVPTICEQAADATELLIELGLEP 183
Query: 180 FLNHIVS 186
N + +
Sbjct: 184 AQNRVHA 190
>gi|58616811|ref|YP_196010.1| peptidyl-tRNA hydrolase [Ehrlichia ruminantium str. Gardel]
gi|58416423|emb|CAI27536.1| Peptidyl-tRNA hydrolase [Ehrlichia ruminantium str. Gardel]
Length = 215
Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 83/190 (43%), Positives = 114/190 (60%), Gaps = 4/190 (2%)
Query: 1 MF-IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG EY RHN+GFM ID I FP +KKK +A IS G + + IL
Sbjct: 23 MLHLLVGLGNPGKEYELTRHNVGFMIIDAIMHHFLFPDFKKKHNALISSGSIQSYKVILA 82
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG + ++ YK+P L+N +V HD+ D+DF T+R+K GGG+AGHNGLKSI
Sbjct: 83 KPYTFMNNSGAPISSIVKLYKIP-LDNIIVFHDETDIDFCTIRIKKGGGNAGHNGLKSID 141
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G++Y R+R GIG P + + HVL F++ + I NI + LL + +
Sbjct: 142 TLLGRDYWRIRFGIGHPSNGYDLSYHVLSQFNN--LNAVNNTISNIIEHISLLFENDKSI 199
Query: 180 FLNHIVSVRK 189
F N + + K
Sbjct: 200 FKNKVKDLIK 209
>gi|298372305|ref|ZP_06982295.1| aminoacyl-tRNA hydrolase [Bacteroidetes oral taxon 274 str. F0058]
gi|298275209|gb|EFI16760.1| aminoacyl-tRNA hydrolase [Bacteroidetes oral taxon 274 str. F0058]
Length = 188
Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 66/186 (35%), Positives = 99/186 (53%), Gaps = 2/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF +DR+ K + I+EG++ + IL+KP
Sbjct: 3 YLIVGLGNIGDEYAHTRHNIGFDTLDRLAEILNVSFDVNKRYGAIAEGKIKNRQVILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+++ + + + N LV+ DDL L GT+RL+ G DAGHNGLK+I +
Sbjct: 63 FTYMNESGKAVRYWLQKENI-GVANLLVVVDDLALPLGTIRLRGKGSDAGHNGLKNIEQL 121
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+NY RLR GIG I++VLG FS+ E+ + I+ +
Sbjct: 122 IATQNYARLRFGIGNDFPQGAQIQYVLGRFSAEEQKTVTERIEVAVDCIRSFCLEGLSVA 181
Query: 181 LNHIVS 186
+N +
Sbjct: 182 MNRFNN 187
>gi|269217261|ref|ZP_06161115.1| aminoacyl-tRNA hydrolase [Slackia exigua ATCC 700122]
gi|269129398|gb|EEZ60483.1| aminoacyl-tRNA hydrolase [Slackia exigua ATCC 700122]
Length = 185
Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 96/186 (51%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF ID + WK + A + G +L K
Sbjct: 1 MHLIVGLGNPGEEYAHTRHNAGFEVIDLLAGELRVSYWKSECGALTGKTAYRGEDIVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ++MN SG + ++ Y ++ +VIHD+LD+D GT+R+K GGG AGHNGLKSI+E
Sbjct: 61 PQSYMNASGGPVKQLAAAYG-ATPDDIVVIHDELDIDPGTIRVKFGGGLAGHNGLKSIAE 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K K++ R+RIGIGRPP ++ VLG ++++ +
Sbjct: 120 KLQTKDWARVRIGIGRPPGRMPVVDWVLGTPRKEAWDDFQQAAHLGSQAVLYFLEHGLAK 179
Query: 180 FLNHIV 185
Sbjct: 180 TQQEYN 185
>gi|125622894|ref|YP_001031377.1| peptidyl-tRNA hydrolase [Lactococcus lactis subsp. cremoris MG1363]
gi|281490511|ref|YP_003352491.1| peptidyl-tRNA hydrolase [Lactococcus lactis subsp. lactis KF147]
gi|166199355|sp|A2RH85|PTH_LACLM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|124491702|emb|CAL96621.1| Pth protein [Lactococcus lactis subsp. cremoris MG1363]
gi|281374329|gb|ADA63862.1| Peptidyl-tRNA hydrolase [Lactococcus lactis subsp. lactis KF147]
gi|300069632|gb|ADJ59032.1| peptidyl-tRNA hydrolase [Lactococcus lactis subsp. cremoris NZ9000]
gi|326405610|gb|ADZ62681.1| peptidyl-tRNA hydrolase, PTH1 family [Lactococcus lactis subsp.
lactis CV56]
Length = 188
Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 100/187 (53%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HN+GFM +D + ++K F + ++ ++G + L+K
Sbjct: 3 KMIVGLGNPGDKYEKTKHNMGFMALDLLAKELNVDFKEEKPFMSLVASTFVNGEKLFLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y + + + V+HDDLD G +RL+ G G NG+KS+
Sbjct: 63 PLTFMNESGRAVAPLLKYYNI-DEADLTVMHDDLDSPVGRVRLRQKGSSGGQNGIKSVIT 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + + R++IGIGRP ++ HVL F + ++ I ++ + +
Sbjct: 122 HVGSQTFNRVKIGIGRPKHGMTVVNHVLSGFDNEDKEIAQDGIFKAVDAMKFYLENGDFQ 181
Query: 179 SFLNHIV 185
+N
Sbjct: 182 KTMNKFN 188
>gi|325684690|gb|EGD26844.1| aminoacyl-tRNA hydrolase [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 185
Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ LGNPG +Y + +HN GFM +D + KF A ++ ++ G I ++
Sbjct: 1 MKLIVALGNPGLKYEKTKHNTGFMALDHYLDEKGLRLDRDKFTALYAKEKVAGEDVIFME 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ F+K+ + + LVI DD+D+ LR++ GG GHNG+KSI
Sbjct: 61 PQTYMNESGRAVGAAAKFFKI-DPSDILVIQDDMDMPIAKLRIRAGGKSGGHNGIKSIIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGI P D ++ VL F+ ++ L + + + +D
Sbjct: 120 CLGTEKFNRLKIGIRHP-DKQSVVSWVLTPFNPDQQKELEASFAKVDQIIDDFIAGKDAQ 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNRYN 185
>gi|152979077|ref|YP_001344706.1| peptidyl-tRNA hydrolase [Actinobacillus succinogenes 130Z]
gi|171704338|sp|A6VP74|PTH_ACTSZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|150840800|gb|ABR74771.1| Aminoacyl-tRNA hydrolase [Actinobacillus succinogenes 130Z]
Length = 194
Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G IDR+ F + KF + + +DG +
Sbjct: 5 KLIVGLGNPGDKYADTRHNAGEWLIDRLSRRFNFTLKDEAKFFGKTARTVIDGHEIRFLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ E L+ HD+LDL GT+++K GGG GHNGLK
Sbjct: 65 PATFMNLSGKAIGALASFYRIRP-EEILLAHDELDLPPGTVKIKQGGGHGGHNGLKDTIA 123
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G KN+ RLRIGIG P D + +VLG S + + +D + +L K
Sbjct: 124 QLGNNKNFYRLRIGIGHPGDRNLVTSYVLGKPSPADWALIDKALDEAVVCVEILLKDGIT 183
Query: 179 SFLNHIVSVR 188
N + +
Sbjct: 184 KATNRLNGFK 193
>gi|15237280|ref|NP_197118.1| peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana]
gi|145334495|ref|NP_001078593.1| peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana]
gi|75311128|sp|Q9LF14|CRS2B_ARATH RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic; AltName: Full=CRS2-like protein
B; AltName: Full=Chloroplastic RNA splicing factor 2-B;
Flags: Precursor
gi|9755824|emb|CAC01855.1| CRS2-like protein [Arabidopsis thaliana]
gi|38016015|gb|AAR07514.1| At5g16140 [Arabidopsis thaliana]
gi|51968726|dbj|BAD43055.1| CRS2-like protein [Arabidopsis thaliana]
gi|332004868|gb|AED92251.1| chloroplastic group IIB intron splicing facilitator CRS2-B
[Arabidopsis thaliana]
gi|332004869|gb|AED92252.1| chloroplastic group IIB intron splicing facilitator CRS2-B
[Arabidopsis thaliana]
Length = 240
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 61/190 (32%), Positives = 103/190 (54%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG++Y RHN+GF ID + + A I G ++ + +L KP
Sbjct: 46 WLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKP 105
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+S+ + + Y++P L + L+I+D++ L G LRL+ GG HNG+KS+
Sbjct: 106 QTYMNFSGESVGSLASHYRVP-LRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGH 164
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+N+ RL IGIG+PP + +L FS E+ + ++ + ++ L
Sbjct: 165 LDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQ 224
Query: 180 FLNHIVSVRK 189
++ V+K
Sbjct: 225 GISRFNLVQK 234
>gi|257066461|ref|YP_003152717.1| peptidyl-tRNA hydrolase [Anaerococcus prevotii DSM 20548]
gi|256798341|gb|ACV28996.1| peptidyl-tRNA hydrolase [Anaerococcus prevotii DSM 20548]
Length = 195
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 111/189 (58%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+ + GLGNPG +Y RHN+GF+ ID + H K KF + +G + G + +L+K
Sbjct: 1 MYYIVGLGNPGLKYENTRHNVGFLTIDYLARKHNIDVRKSKFKSLYGQGTISGHKVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ ++ NFYK + + +VI+DD+D+DFG++R++ G HNG+KSI
Sbjct: 61 PQTYMNNSGEAVRDLKNFYKF-DTDKLIVIYDDIDIDFGSIRIRKKGSAGTHNGMKSIIY 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + + R++I +G+ P+ + VL FS E + ID ++S+ + +
Sbjct: 120 QIQDDSFPRIKIAVGKKPEYMDLANFVLSGFSEKEAEIIRNEIDIASKSIETIIEENIDK 179
Query: 180 FLNHIVSVR 188
+N SVR
Sbjct: 180 SMNLYNSVR 188
>gi|209519641|ref|ZP_03268431.1| Aminoacyl-tRNA hydrolase [Burkholderia sp. H160]
gi|209499927|gb|EDZ99992.1| Aminoacyl-tRNA hydrolase [Burkholderia sp. H160]
Length = 201
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLVDQLTRETGTTLRDERRFHGFYAKARLHGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ + F+K+ E LV HD+LD+ G+++LK GGG GHNGLK IS
Sbjct: 63 PQTYMNRSGQSVVALAQFFKILPDE-ILVAHDELDMPPGSVKLKLGGGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + +VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANYVLKPPRREEQEVIDASIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P + K E + +
Sbjct: 182 PQVIKGELERAMMQLH 197
>gi|87125090|ref|ZP_01080937.1| Peptidyl-tRNA hydrolase [Synechococcus sp. RS9917]
gi|86167410|gb|EAQ68670.1| Peptidyl-tRNA hydrolase [Synechococcus sp. RS9917]
Length = 207
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 66/194 (34%), Positives = 106/194 (54%), Gaps = 10/194 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
++ GLGNPG Y RHN+GFM ++ + A++ K +++E R L+
Sbjct: 8 LLVGLGNPGDRYHGTRHNVGFMALEALARR-NASAFRSMAKLQGQVAEIGFGPGRLRLLM 66
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +++++ ++ LV+ DD+DL G LRL+ GG GHNGL+S +
Sbjct: 67 PQTFMNESGRSIRAALDWFQF-DVNQVLVVVDDMDLPLGRLRLRAKGGAGGHNGLRSTIQ 125
Query: 121 KCGKN-YKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G + RLRIGIG P A + HVLG FS E+ L +I+ + + + + +
Sbjct: 126 HLGTEAFARLRIGIGAPGRTAEERRARTVSHVLGRFSQAEQPLLDQVIEAVVQGVDQIQR 185
Query: 175 REDVSFLNHIVSVR 188
+ NH+ ++
Sbjct: 186 QGLERAGNHLNGLQ 199
>gi|300726452|ref|ZP_07059898.1| aminoacyl-tRNA hydrolase [Prevotella bryantii B14]
gi|299776180|gb|EFI72744.1| aminoacyl-tRNA hydrolase [Prevotella bryantii B14]
Length = 190
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 65/188 (34%), Positives = 96/188 (51%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY + RHN GFM +D ++ K + ++E + G + L+KP
Sbjct: 4 YLICGLGNPGSEYEDTRHNTGFMVLDAFAKASNI-VFEDKRYGFVAETSIKGRKVFLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + + LVI DD+ L G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENIDQ-SHLLVISDDVALPLGAFRLKASGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G+NY RLR+GIG + VLG++S + L P ID + + +
Sbjct: 122 IGQNYARLRMGIGNDYPRGRQVDWVLGHYSEDDMKLLQPAIDLGGEIIKSFVLSGIDNTM 181
Query: 182 NHIVSVRK 189
N + K
Sbjct: 182 NQFNKLGK 189
>gi|58578752|ref|YP_196964.1| peptidyl-tRNA hydrolase [Ehrlichia ruminantium str. Welgevonden]
gi|58417378|emb|CAI26582.1| Peptidyl-tRNA hydrolase [Ehrlichia ruminantium str. Welgevonden]
Length = 215
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 83/190 (43%), Positives = 114/190 (60%), Gaps = 4/190 (2%)
Query: 1 MF-IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG EY RHN+GFM ID I FP +KKK +A IS G + + IL
Sbjct: 23 MLHLLVGLGNPGKEYELTRHNVGFMIIDAIMHHFLFPDFKKKHNALISSGSIRSHKVILA 82
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG + ++ YK+P L+N +V HD+ D+DF T+R+K GGG+AGHNGLKSI
Sbjct: 83 KPYTFMNNSGTPISSIVKLYKIP-LDNIIVFHDETDIDFCTIRIKKGGGNAGHNGLKSID 141
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G++Y R+R GIG P + + HVL F++ + I NI + LL + +
Sbjct: 142 TLLGRDYWRIRFGIGHPSNGYDLSYHVLSQFNN--LNAVNNTISNIIEHISLLFENDKSI 199
Query: 180 FLNHIVSVRK 189
F N + + K
Sbjct: 200 FKNKVKDLIK 209
>gi|85713256|ref|ZP_01044281.1| peptidyl-tRNA hydrolase [Idiomarina baltica OS145]
gi|85692925|gb|EAQ30898.1| peptidyl-tRNA hydrolase [Idiomarina baltica OS145]
Length = 196
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 71/189 (37%), Positives = 98/189 (51%), Gaps = 3/189 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF ++ H K A I Q ++
Sbjct: 6 KLLVGLGNPGPEYEKTRHNAGFWLVEAYCRRHGVTLTADTKTKALIGRHQTATRDLRIVL 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG S+ + FYK+ E LV +D+LDLD G + K GGG GHNG+K
Sbjct: 66 PQTFMNKSGYSIAAMARFYKIAP-EQILVAYDELDLDPGVAKFKRGGGAGGHNGIKDTIA 124
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +++ RLR+GIG P + + VLG S+PER L ID +R++ +L
Sbjct: 125 QLGTQDFMRLRVGIGHPGHRSQVTGFVLGKPSAPERALLDECIDEASRAIDILIDEGWGP 184
Query: 180 FLNHIVSVR 188
L + S R
Sbjct: 185 ALQQLHSFR 193
>gi|194334187|ref|YP_002016047.1| peptidyl-tRNA hydrolase [Prosthecochloris aestuarii DSM 271]
gi|238693336|sp|B4S8L3|PTH_PROA2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|194312005|gb|ACF46400.1| Aminoacyl-tRNA hydrolase [Prosthecochloris aestuarii DSM 271]
Length = 192
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 96/190 (50%), Gaps = 2/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +VAGLGNP Y RHNIGF +D + H K + S+ +L+K
Sbjct: 1 MKLVAGLGNPEARYENTRHNIGFEVVDELARLHQSSFSSGKGNFLYSKIIHRNEPILLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG +++ M FYK+ ++ LV+ DDL++ GT+R++ G G NGLK I +
Sbjct: 61 PMTYMNLSGNAVIAAMTFYKI-EYQDILVVCDDLNIALGTIRMRAKGSAGGQNGLKHIIQ 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ ++ RLR+GI + VLG F++ ER ++ A +
Sbjct: 120 CLKRDDFARLRVGIAPDHPVSSYSSFVLGKFNAEERKITDRMVSLSAEAALDFVAHGVEH 179
Query: 180 FLNHIVSVRK 189
+NH + +K
Sbjct: 180 AMNHYNTGKK 189
>gi|90408737|ref|ZP_01216884.1| Peptidyl-tRNA hydrolase [Psychromonas sp. CNPT3]
gi|90310154|gb|EAS38292.1| Peptidyl-tRNA hydrolase [Psychromonas sp. CNPT3]
Length = 196
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G ++++ S + KF+ Q G L+
Sbjct: 6 KLLVGLANPGPEYENTRHNAGQRFLNQLVSQENVHLKAEAKFYGLTGRIQFAGNDLRLLV 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + NFY++ E L+ HD+LDL G + K GGG GHNGL+ I
Sbjct: 66 PTTFMNLSGKSVAAMANFYRIKP-EEILIAHDELDLPPGIAKFKLGGGHGGHNGLRDIIS 124
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G KN+ RLRIGIG P D + VLG S E+ + ID AR +L +
Sbjct: 125 QLGNNKNFYRLRIGIGHPGDRNRVSGFVLGKASRTEQDLIDQSIDEAARCTLILGQDGLA 184
Query: 179 SFLNHIVSVR 188
+N + S +
Sbjct: 185 KAMNRLHSFK 194
>gi|23097516|ref|NP_690982.1| peptidyl-tRNA hydrolase [Oceanobacillus iheyensis HTE831]
gi|34222739|sp|Q8CXP8|PTH_OCEIH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|22775739|dbj|BAC12017.1| stage V sporulation protein C (peptidyl-tRNA hydrolase (PTH))
[Oceanobacillus iheyensis HTE831]
Length = 187
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 3/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG ++ + RHNIGF ID + H + KF + S DG + IL++
Sbjct: 1 MKLIVGLGNPGRKFKKTRHNIGFFVIDELLQRHKWKLNNSKFEGDYSIEHFDGEKVILLQ 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ +M+++ + + +V DLDL G +RL+ GG GHNG++S +
Sbjct: 61 PQTYMNLSGKSISPLMDYFDIDVDDVIVVYD-DLDLPTGKIRLRQKGGHGGHNGVRSTID 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G K++KR+R+GIGRP + +I +VLG F E + ++ A ++ K + +
Sbjct: 120 HLGTKDFKRVRLGIGRPTNATPVIDYVLGKFPKQETTAVTDSVEKAADAIEAWIKGKPFL 179
Query: 179 SFLNHIVS 186
+N
Sbjct: 180 EVMNDFNQ 187
>gi|220912061|ref|YP_002487370.1| peptidyl-tRNA hydrolase [Arthrobacter chlorophenolicus A6]
gi|254783850|sp|B8HFE2|PTH_ARTCA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219858939|gb|ACL39281.1| Aminoacyl-tRNA hydrolase [Arthrobacter chlorophenolicus A6]
Length = 196
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 110/190 (57%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQ--LDGLRTILI 59
+++ GLGNPG +Y NRHN+G M +D + K A++ EG+ + G R +L
Sbjct: 5 WLIVGLGNPGAQYQGNRHNVGQMVLDELAGRVGAGFKSHKARAQVVEGRLGIGGPRVVLA 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN+SG + + NFY + + ++ + +HD++D+ F T++LK GGG+ GHNGL+ IS
Sbjct: 65 KPMTYMNVSGGPVSALANFYGI-SPDHVVAVHDEIDIPFNTVKLKIGGGEGGHNGLRDIS 123
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ K+Y R+R+G+GRPP +VL +F + E L ++D A ++ LL +
Sbjct: 124 KALATKDYLRVRVGVGRPPGRMDTADYVLRDFGTAELKELPFLLDEAADAVELLLQEGLT 183
Query: 179 SFLNHIVSVR 188
+ +
Sbjct: 184 AAQQKFHPAK 193
>gi|160931463|ref|ZP_02078859.1| hypothetical protein CLOLEP_00296 [Clostridium leptum DSM 753]
gi|156869528|gb|EDO62900.1| hypothetical protein CLOLEP_00296 [Clostridium leptum DSM 753]
Length = 207
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 109/186 (58%), Gaps = 3/186 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
IVAGLGNPG EY RHN GF+ +D+I + K+ + ++ L G R +L+KPQ
Sbjct: 23 IVAGLGNPGREYENTRHNAGFLVLDQIAGSCGVRLDRLKYKSLCADAVLGGRRVLLMKPQ 82
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSGQ++ E M FYKLP E +VI DD+ L+ G LR++ G D GHNG+K+I
Sbjct: 83 TFMNLSGQAVTEAMRFYKLP-AEKVIVIFDDISLEPGKLRIRRKGSDGGHNGIKNIIYLS 141
Query: 123 GKN-YKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
GK+ + R+++G+G+ P ++ VL F+ E+ + A++ L+ + +
Sbjct: 142 GKDTFPRIKMGVGKKPRPDYNLADWVLSRFTQQEQQAMEEAAKRAAQAAELMVQGKIDQA 201
Query: 181 LNHIVS 186
+N S
Sbjct: 202 MNQFNS 207
>gi|315634932|ref|ZP_07890214.1| aminoacyl-tRNA hydrolase [Aggregatibacter segnis ATCC 33393]
gi|315476484|gb|EFU67234.1| aminoacyl-tRNA hydrolase [Aggregatibacter segnis ATCC 33393]
Length = 194
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 72/190 (37%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I R+ + KF ++ + ++G +
Sbjct: 5 KLIVGLGNPGDKYEDTRHNAGEWLIARLARRFNVTLNAENKFFGKVGKTLMNGKEIRFLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LV+HD+LDL G+++LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALANFYRIKP-EEILVLHDELDLPPGSVKLKLGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N + RLRIGIG P + +VL S ER L +D A + LL K V
Sbjct: 124 ALGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPSEREALENALDEAANCVELLFKDGIV 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|296113816|ref|YP_003627754.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis RH4]
gi|295921510|gb|ADG61861.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis RH4]
gi|326562160|gb|EGE12488.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis 7169]
gi|326564475|gb|EGE14701.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis 46P47B1]
gi|326566226|gb|EGE16378.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis 103P14B1]
gi|326568385|gb|EGE18465.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis BC7]
gi|326574884|gb|EGE24814.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis 101P30B1]
gi|326576208|gb|EGE26123.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis CO72]
Length = 190
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN GF ++++ + KKFH ++ G + L+
Sbjct: 4 KLIVGLGNPGVQYQQTRHNAGFWFVEQLADKFGIRLIFDKKFHGQVGRGTIHNQEVRLLL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN SGQS+ FY + E+ L+ HD+LD+ G+++LKTGGG GHNGLK I
Sbjct: 64 PETFMNRSGQSVAPFTKFYGIHP-ESILIAHDELDIPVGSIKLKTGGGHGGHNGLKDIVP 122
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ RLRIGIGRP ++ + HVL S+ +R + ID S+ + +
Sbjct: 123 HIGADFHRLRIGIGRPMHSSQVSGHVLSKPSADDRISITAAIDCAVASIHEIILGDMERA 182
Query: 181 LNHIVSVR 188
N I R
Sbjct: 183 RNQINGFR 190
>gi|118473398|ref|YP_889671.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis str. MC2 155]
gi|166229422|sp|A0R3D3|PTH_MYCS2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118174685|gb|ABK75581.1| peptidyl-tRNA hydrolase [Mycobacterium smegmatis str. MC2 155]
Length = 191
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 75/187 (40%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG Y + RHN+GFM D + KK AE+ G+L G +L K
Sbjct: 5 LLVVGLGNPGPTYAKTRHNLGFMVADVLAGRIGSAFKVHKKSGAEVVTGRLAGTSVVLAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ +MN SG+ + + FY +P + +VIHD+LD+DFG +RLK GGG+ GHNGL+S++
Sbjct: 65 PRCYMNESGRQVGPLAKFYSVPP-QQIVVIHDELDIDFGRIRLKLGGGEGGHNGLRSVAS 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G KN+ R+RIG+GRPP VL NF++ ER + I++ A + LL +
Sbjct: 124 ALGTKNFHRVRIGVGRPPGRKDPAAFVLENFTAAERAEVPTIVEQAADATELLIAQGLEP 183
Query: 180 FLNHIVS 186
N + +
Sbjct: 184 AQNTVHA 190
>gi|224823794|ref|ZP_03696903.1| Aminoacyl-tRNA hydrolase [Lutiella nitroferrum 2002]
gi|224604249|gb|EEG10423.1| Aminoacyl-tRNA hydrolase [Lutiella nitroferrum 2002]
Length = 194
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 73/190 (38%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEG-QLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D + H + KF E++ Q G L+K
Sbjct: 6 LIVGLGNPGPEYEKTRHNAGFWLVDELAWQHKAALRGEGKFFGEVARAPQPGGSDLWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSGQ++ + FYK+ E LV+HD+LDL GT R K GGG GHNGLK I
Sbjct: 66 PMTFMNLSGQAVAALARFYKIAP-EEILVVHDELDLQPGTARFKQGGGHGGHNGLKDIIA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G N+ RLR+GIG P + + ++ VL S E+ + + R LP +
Sbjct: 125 RLGTPNFWRLRLGIGHPGERSEVVGFVLKKPRSEEQGAIEDAMAAALRVLPQAIAGDMPG 184
Query: 180 FLNHIVSVRK 189
+ + + K
Sbjct: 185 AMKTLHTAAK 194
>gi|148653904|ref|YP_001280997.1| peptidyl-tRNA hydrolase [Psychrobacter sp. PRwf-1]
gi|148572988|gb|ABQ95047.1| peptidyl-tRNA hydrolase [Psychrobacter sp. PRwf-1]
Length = 207
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILI 59
+ ++ GLGNPG +Y E RHN GF + I A KKF+ G++ G L+
Sbjct: 17 LKLIVGLGNPGQQYVETRHNAGFWFVALIADQFNIELAADKKFNGLTGRGRIFGTDVRLL 76
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMN SGQS++ + +Y + E L+ HD+LD+ G+++LKTGGG GHNGL+ I+
Sbjct: 77 LPMTFMNKSGQSVVPMAKYYDIKP-EELLIAHDELDIAAGSIKLKTGGGHGGHNGLRDIT 135
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ RLRIGIG P + + HVL S ++ + +D SL L+ +
Sbjct: 136 PHLGNDFHRLRIGIGHPGHKSKVSGHVLSKPSPEDQIAIEAALDAAMSSLKLMVTGDIEK 195
Query: 180 FLNHIVSVR 188
+ I +
Sbjct: 196 ARSQINGFK 204
>gi|227512316|ref|ZP_03942365.1| peptidyl-tRNA hydrolase [Lactobacillus buchneri ATCC 11577]
gi|227084491|gb|EEI19803.1| peptidyl-tRNA hydrolase [Lactobacillus buchneri ATCC 11577]
Length = 189
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 97/176 (55%), Gaps = 2/176 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN GFM ++ H +K +A++ ++G + ++++
Sbjct: 4 MKMIVGLGNIGPQYDGTRHNTGFMVVEEFAKKHGISIKIRKMNAKMGSAFVNGQKVLVVE 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +M+++++ N ++ +V+HDD+DL G +R+K G GHNG+KS+
Sbjct: 64 PTTFMNDSGIAVKPLMSYFEIEN-KDVIVVHDDMDLPIGKIRIKDKGSAGGHNGIKSLIN 122
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G + R+R+GI P ++ +VLG FS + DN +L
Sbjct: 123 NLGTEHFSRIRVGIAHPDKNNTVVNYVLGRFSKSQLPEFKIATDNAVNALEDWLDD 178
>gi|167856607|ref|ZP_02479308.1| peptidyl-tRNA hydrolase [Haemophilus parasuis 29755]
gi|167852273|gb|EDS23586.1| peptidyl-tRNA hydrolase [Haemophilus parasuis 29755]
Length = 194
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y E RHN G ++ + ++ K+ ++++ L+
Sbjct: 5 KLIVGLANPGAKYEETRHNAGEWLVNELARMFNVTLKEEAKYFGKVAKINTPQGEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LV HD+LDL G ++K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGSLANFYRIKP-EEILVAHDELDLPPGVAKIKQGGGHGGHNGLKDIIA 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N+ R+RIGIG P + +VLG S ++ + +D +R + LL K V
Sbjct: 124 ALGNSNNFYRVRIGIGHPGHKDLVASYVLGKPSPSDQPLINVAVDEASRCVELLFKEGIV 183
Query: 179 SFLNHIVSVR 188
N + +
Sbjct: 184 KATNRLNGFK 193
>gi|281356646|ref|ZP_06243137.1| peptidyl-tRNA hydrolase [Victivallis vadensis ATCC BAA-548]
gi|281316773|gb|EFB00796.1| peptidyl-tRNA hydrolase [Victivallis vadensis ATCC BAA-548]
Length = 205
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 73/187 (39%), Positives = 100/187 (53%), Gaps = 5/187 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAE--ISEGQLDGLRTILIK 60
+V GLGNPG EY RHN+GFM IDR+ + +++K AE + G G IL K
Sbjct: 10 LVVGLGNPGSEYDGTRHNVGFMVIDRLLAAFPAGRFEEKHVAESRVFTGNFRGRSLILQK 69
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG ++ + + E LVI DDLDL G LRL+ GG D GHNGLKSI
Sbjct: 70 PLTFMNLSGNAVAPLARKLGIAP-EAILVISDDLDLPLGRLRLRAGGADGGHNGLKSIIA 128
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G ++KRLR+GIGRP + +VL F + ++ A ++ +
Sbjct: 129 ELGSASFKRLRVGIGRPKPGETV-DYVLSKFEGGDAETFEAVLAASADAVRAVLTGGMSR 187
Query: 180 FLNHIVS 186
+N +
Sbjct: 188 AMNKFNA 194
>gi|326574300|gb|EGE24247.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis O35E]
Length = 190
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN GF ++++ + KKFH ++ G + L+
Sbjct: 4 KLIVGLGNPGVQYQQTRHNAGFWFVEQLADKFGIRLIFDKKFHGQVGRGTIHNQEVRLLL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN SGQS+ FY + E+ L+ HD+LD+ G+++LKTGGG GHNGLK I
Sbjct: 64 PETFMNRSGQSVAPFTKFYGIHP-ESILIAHDELDIPVGSIKLKTGGGHGGHNGLKDIVP 122
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ RLRIGIGRP ++ + HVL S+ +R + ID S+ + +
Sbjct: 123 HIGADFHRLRIGIGRPMHSSQVSGHVLSKPSTDDRISITAAIDCAVASIHEIILGDMERA 182
Query: 181 LNHIVSVR 188
N I R
Sbjct: 183 RNQINGFR 190
>gi|41407076|ref|NP_959912.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|254774033|ref|ZP_05215549.1| peptidyl-tRNA hydrolase [Mycobacterium avium subsp. avium ATCC
25291]
gi|68052977|sp|Q741V9|PTH_MYCPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|41395427|gb|AAS03295.1| Pth [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 191
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 76/187 (40%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHA-EISEGQLDGLRTILIK 60
+V GLGNPG Y RHN+GFM D + + K EI G+L G ++ K
Sbjct: 5 LLVVGLGNPGDNYARTRHNVGFMVADLLAARMGSKFKAHKRSGAEIVSGRLAGRSVVVAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ +MN SG+ + + FY +P + +VIHDDLDLDFG +RLK GGG+ GHNGL+S++
Sbjct: 65 PRCYMNESGRQVGPLAKFYSVPPG-DIIVIHDDLDLDFGRIRLKIGGGEGGHNGLRSVAN 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K+++R+RIGIGRPP VL NF+S ER + I + A + LL +
Sbjct: 124 ALGSKDFQRVRIGIGRPPGRKDPAAFVLENFTSTERADVPTICEQAADATELLIELGLEP 183
Query: 180 FLNHIVS 186
N + +
Sbjct: 184 AQNRVHA 190
>gi|299140505|ref|ZP_07033643.1| aminoacyl-tRNA hydrolase [Prevotella oris C735]
gi|298577471|gb|EFI49339.1| aminoacyl-tRNA hydrolase [Prevotella oris C735]
Length = 190
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 68/188 (36%), Positives = 97/188 (51%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG EY + RHN GFM +D ++ K + I+E + G + IL+KP
Sbjct: 4 FLICGLGNPGDEYQDTRHNTGFMVLDAFAKASNI-HFEDKRYGYIAETTIKGRKLILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + + LVI DD+ L G RLK G + GHNGL +I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENIVQ-SHLLVISDDIALPLGAFRLKANGSNGGHNGLGNIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G++Y RLR+GIG + VLG + + E L P ID + A +
Sbjct: 122 IGQDYARLRMGIGNEYPKGGQVDWVLGKYDADEMKRLQPSIDIACEIIKSFALAGINITM 181
Query: 182 NHIVSVRK 189
N + K
Sbjct: 182 NQFNKLGK 189
>gi|183984443|ref|YP_001852734.1| peptidyl-tRNA hydrolase Pth [Mycobacterium marinum M]
gi|238689227|sp|B2HDJ5|PTH_MYCMM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|183177769|gb|ACC42879.1| peptidyl-tRNA hydrolase Pth [Mycobacterium marinum M]
Length = 191
Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 77/187 (41%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG Y RHN+GFM D + + K+ AE+ G+L +L K
Sbjct: 5 LLVVGLGNPGENYARTRHNLGFMVADLLAARLGAKFKVHKRSGAEVVTGRLAQRSVVLAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ +MN SG+ + + FY +P + +VIHD+LDLDFG +RLK GGG+ GHNGL+S++
Sbjct: 65 PRCYMNESGRQVAPLAKFYSVPPA-DLIVIHDELDLDFGRIRLKFGGGEGGHNGLRSVAA 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K+++R+RIGIGRPP VL NFSSPER + I + A + LL +
Sbjct: 124 ALGTKDFQRVRIGIGRPPGRKDPATFVLENFSSPERPEVPTICEQAADATELLVEIGLEP 183
Query: 180 FLNHIVS 186
N + +
Sbjct: 184 AQNRVHA 190
>gi|318042729|ref|ZP_07974685.1| peptidyl-tRNA hydrolase [Synechococcus sp. CB0101]
Length = 216
Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 66/192 (34%), Positives = 102/192 (53%), Gaps = 8/192 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GFM ++R+ + + K H ++E + R L+ P
Sbjct: 12 LLVGLGNPGDKYAGTRHNVGFMALERLAAEAGGSFKQQNKLHGLLAEVGVGAQRLRLLMP 71
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+S+ ++++ L + LV+ DD+DL G LRL+T GG GHNGL+S
Sbjct: 72 QTFMNDSGRSIRAALDWFGLDPV-QILVLVDDMDLPLGRLRLRTSGGAGGHNGLRSTIAH 130
Query: 122 C-GKNYKRLRIGIGRP-----PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G+ + RLRIGIG P + HVLG F + E+ L ++ + + L+ +
Sbjct: 131 LGGQEFPRLRIGIGAPALNPVERKQRTVGHVLGRFDAAEQPVLDQVLAEVLAGVDLIQRL 190
Query: 176 EDVSFLNHIVSV 187
N +
Sbjct: 191 GFERAGNRLNGF 202
>gi|116510853|ref|YP_808069.1| peptidyl-tRNA hydrolase [Lactococcus lactis subsp. cremoris SK11]
gi|123126037|sp|Q033H5|PTH_LACLS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116106507|gb|ABJ71647.1| peptidyl-tRNA hydrolase [Lactococcus lactis subsp. cremoris SK11]
Length = 188
Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HN+GFM +D + + ++K F + ++ ++G + L+K
Sbjct: 3 KMIVGLGNPGDKYEKTKHNMGFMALDLLANELNVDFKEEKPFMSLVASTFVNGEKLFLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y + + + V+HDDLD G +RL+ G G NG+KS+
Sbjct: 63 PLTFMNESGRAVAPLLKYYNI-DEADLTVMHDDLDSPVGRVRLRQKGSSGGQNGIKSVIT 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + + R++IGIGRP ++ HVL F + ++ I ++ + +
Sbjct: 122 HVGSQTFNRVKIGIGRPKHGMTVVNHVLSGFDNEDKEIAQDGIFKAVDAMKFYLENGDFQ 181
Query: 179 SFLNHIV 185
+N
Sbjct: 182 KTMNKFN 188
>gi|308190380|ref|YP_003923311.1| aminoacyl-tRNA hydrolase [Mycoplasma fermentans JER]
gi|307625122|gb|ADN69427.1| aminoacyl-tRNA hydrolase [Mycoplasma fermentans JER]
Length = 186
Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 7/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HNIGF+ +D+I + K+KF+ ++ IL K
Sbjct: 1 MKLIVGLGNPGSQYRFTKHNIGFLTVDKICANFNLTLTKEKFNGFYAKT----EDFILAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+ + + +FYK+ + + L+IHD+ D + G +K GG AGHNG++SI
Sbjct: 57 PTTYMNNSGEFVQAIASFYKI-DPSDILIIHDEKDYEIGQAAIKVGGSSAGHNGVQSIIN 115
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+KRLRIGIGR P + +VL NF+S + + +++ A++ +
Sbjct: 116 ALRSNEFKRLRIGIGRDP-KMELKDYVLSNFTSDQMLVVEQVLNVAAQAAISFVYNDIKI 174
Query: 180 FLNHIVSVRK 189
+N+ RK
Sbjct: 175 VMNNFNVFRK 184
>gi|326565658|gb|EGE15821.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis 12P80B1]
gi|326567121|gb|EGE17243.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis BC1]
gi|326572286|gb|EGE22281.1| peptidyl-tRNA hydrolase [Moraxella catarrhalis BC8]
Length = 190
Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 104/188 (55%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN GF ++++ + KKFH ++ G + L+
Sbjct: 4 KLIVGLGNPGVQYQQTRHNAGFWFVEQLADKFGIRLIFDKKFHGQVGRGTIHNQEVRLLL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN SGQS+ FY + E+ L+ HD+LD+ G+++LKTGGG GHNGLK I
Sbjct: 64 PETFMNRSGQSVAPFTKFYGIHP-ESILIAHDELDIPVGSIKLKTGGGHGGHNGLKDIVP 122
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ RLRIGIGRP ++ + HVL S+ +R + ID S+ + +
Sbjct: 123 HIGADFHRLRIGIGRPMHSSQVSGHVLSKPSADDRISITSAIDCAVASIHEIILGDMERA 182
Query: 181 LNHIVSVR 188
N I R
Sbjct: 183 RNQINGFR 190
>gi|297811751|ref|XP_002873759.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297319596|gb|EFH50018.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 239
Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG++Y RHN+GF ID + + A I G ++ + +L+KP
Sbjct: 45 WLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLVKP 104
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+S+ + + Y++P L + L+++D++ L G LRL+ GG HNG+KS+
Sbjct: 105 QTYMNFSGESVGSLASHYRVP-LRHILMLYDEMALPNGVLRLQPKGGQGYHNGVKSVMGH 163
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+N+ RL IGIG+PP + +L FS ER + ++ + ++ L
Sbjct: 164 LDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLERKQIDEALEQGSEAVKTLVLNGFNQ 223
Query: 180 FLNHIVSVRK 189
++ V+K
Sbjct: 224 GISRFNLVQK 233
>gi|15608154|ref|NP_215530.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Rv]
gi|15840442|ref|NP_335479.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CDC1551]
gi|31792205|ref|NP_854698.1| peptidyl-tRNA hydrolase [Mycobacterium bovis AF2122/97]
gi|121636943|ref|YP_977166.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660796|ref|YP_001282319.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Ra]
gi|148822223|ref|YP_001286977.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis F11]
gi|167968127|ref|ZP_02550404.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Ra]
gi|215402829|ref|ZP_03415010.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 02_1987]
gi|215410616|ref|ZP_03419424.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 94_M4241A]
gi|215426292|ref|ZP_03424211.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T92]
gi|215429875|ref|ZP_03427794.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis EAS054]
gi|215445163|ref|ZP_03431915.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T85]
gi|218752685|ref|ZP_03531481.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis GM 1503]
gi|219556882|ref|ZP_03535958.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T17]
gi|224989415|ref|YP_002644102.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253799956|ref|YP_003032957.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 1435]
gi|254231308|ref|ZP_04924635.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis C]
gi|254363930|ref|ZP_04979976.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis str.
Haarlem]
gi|254549999|ref|ZP_05140446.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260185925|ref|ZP_05763399.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CPHL_A]
gi|260200043|ref|ZP_05767534.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T46]
gi|260204232|ref|ZP_05771723.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis K85]
gi|289442435|ref|ZP_06432179.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T46]
gi|289446595|ref|ZP_06436339.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CPHL_A]
gi|289555203|ref|ZP_06444413.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 605]
gi|289568992|ref|ZP_06449219.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T17]
gi|289573654|ref|ZP_06453881.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis K85]
gi|289744750|ref|ZP_06504128.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 02_1987]
gi|289749544|ref|ZP_06508922.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T92]
gi|289753075|ref|ZP_06512453.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis EAS054]
gi|289757096|ref|ZP_06516474.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T85]
gi|289761150|ref|ZP_06520528.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis GM 1503]
gi|294995203|ref|ZP_06800894.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 210]
gi|297633540|ref|ZP_06951320.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN 4207]
gi|297730525|ref|ZP_06959643.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN R506]
gi|298524510|ref|ZP_07011919.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 94_M4241A]
gi|306775149|ref|ZP_07413486.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu001]
gi|306781936|ref|ZP_07420273.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu002]
gi|306783709|ref|ZP_07422031.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu003]
gi|306788064|ref|ZP_07426386.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu004]
gi|306792397|ref|ZP_07430699.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu005]
gi|306796800|ref|ZP_07435102.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu006]
gi|306802686|ref|ZP_07439354.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu008]
gi|306806865|ref|ZP_07443533.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu007]
gi|306967066|ref|ZP_07479727.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu009]
gi|306971256|ref|ZP_07483917.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu010]
gi|307083545|ref|ZP_07492658.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu012]
gi|313657854|ref|ZP_07814734.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis KZN V2475]
gi|54038905|sp|P65866|PTH_MYCBO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54041591|sp|P65865|PTH_MYCTU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229421|sp|A1KHF2|PTH_MYCBP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229425|sp|A5U157|PTH_MYCTA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783880|sp|C1AM05|PTH_MYCBT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157836744|pdb|2Z2I|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis
gi|157836745|pdb|2Z2J|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis
gi|157836746|pdb|2Z2J|B Chain B, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis
gi|157836747|pdb|2Z2K|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Tuberculosis
gi|1870014|emb|CAB06865.1| PROBABLE PEPTIDYL-TRNA HYDROLASE PTH [Mycobacterium tuberculosis
H37Rv]
gi|13880613|gb|AAK45293.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis CDC1551]
gi|31617793|emb|CAD93902.1| PROBABLE PEPTIDYL-TRNA HYDROLASE PTH [Mycobacterium bovis
AF2122/97]
gi|121492590|emb|CAL71058.1| Probable peptidyl-trna hydrolase pth [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124600367|gb|EAY59377.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis C]
gi|134149444|gb|EBA41489.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis str.
Haarlem]
gi|148504948|gb|ABQ72757.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis H37Ra]
gi|148720750|gb|ABR05375.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis F11]
gi|224772528|dbj|BAH25334.1| peptidyl-tRNA hydrolase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253321459|gb|ACT26062.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 1435]
gi|289415354|gb|EFD12594.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T46]
gi|289419553|gb|EFD16754.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CPHL_A]
gi|289439835|gb|EFD22328.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 605]
gi|289538085|gb|EFD42663.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis K85]
gi|289542746|gb|EFD46394.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T17]
gi|289685278|gb|EFD52766.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 02_1987]
gi|289690131|gb|EFD57560.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis T92]
gi|289693662|gb|EFD61091.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis EAS054]
gi|289708656|gb|EFD72672.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis GM 1503]
gi|289712660|gb|EFD76672.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis T85]
gi|298494304|gb|EFI29598.1| peptidyl-tRNA hydrolase [Mycobacterium tuberculosis 94_M4241A]
gi|308216299|gb|EFO75698.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu001]
gi|308325327|gb|EFP14178.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu002]
gi|308331492|gb|EFP20343.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu003]
gi|308335298|gb|EFP24149.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu004]
gi|308339106|gb|EFP27957.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu005]
gi|308342778|gb|EFP31629.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu006]
gi|308346687|gb|EFP35538.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu007]
gi|308350602|gb|EFP39453.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu008]
gi|308355235|gb|EFP44086.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu009]
gi|308359190|gb|EFP48041.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu010]
gi|308366756|gb|EFP55607.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis SUMu012]
gi|323720514|gb|EGB29596.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis CDC1551A]
gi|326904759|gb|EGE51692.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis W-148]
gi|328459699|gb|AEB05122.1| peptidyl-tRNA hydrolase pth [Mycobacterium tuberculosis KZN 4207]
Length = 191
Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 72/187 (38%), Positives = 105/187 (56%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHA-EISEGQLDGLRTILIK 60
+V GLGNPG Y RHN+GF+ D + + K E++ G+ G +L K
Sbjct: 5 LLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ +MN SG+ + + FY + N +VIHDDLDL+FG +RLK GGG+ GHNGL+S+
Sbjct: 65 PRCYMNESGRQIGPLAKFYSVAPA-NIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVA 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K+++R+RIGIGRPP VL NF+ ER + I + A + LL ++
Sbjct: 124 ALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEP 183
Query: 180 FLNHIVS 186
N + +
Sbjct: 184 AQNRVHA 190
>gi|324989583|gb|EGC21529.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis SK353]
Length = 189
Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM +D+I K F A+I+ L+G + +K
Sbjct: 3 KLIVGLGNPGEKYIETKHNVGFMLVDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + +KR++IGIGRP + ++ HVLG F + +L +D + ++ +
Sbjct: 122 HIGSQEFKRIKIGIGRPKEGVTVVHHVLGKFDKDDYMTILNTLDKVDNAVNYYLQSVNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QTMQKYN 188
>gi|83719915|ref|YP_441030.1| peptidyl-tRNA hydrolase [Burkholderia thailandensis E264]
gi|167579759|ref|ZP_02372633.1| peptidyl-tRNA hydrolase [Burkholderia thailandensis TXDOH]
gi|167617835|ref|ZP_02386466.1| peptidyl-tRNA hydrolase [Burkholderia thailandensis Bt4]
gi|257140317|ref|ZP_05588579.1| peptidyl-tRNA hydrolase [Burkholderia thailandensis E264]
gi|119390920|sp|Q2T1B9|PTH_BURTA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|83653740|gb|ABC37803.1| peptidyl-tRNA hydrolase [Burkholderia thailandensis E264]
Length = 201
Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLYGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ + +F+K+ E LV HD+LDL G ++LK GGG GHNGLK IS
Sbjct: 63 PQTYMNRSGQSVVALAHFFKILPNE-ILVAHDELDLPPGAVKLKLGGGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDMIPESARAGAKPDVANFVLKPPRKEEQDVIDAAIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P + K E + +
Sbjct: 182 PAVVKGETERAMMQLH 197
>gi|301168559|emb|CBW28149.1| Peptidyl-tRNA hydrolase [Bacteriovorax marinus SJ]
Length = 190
Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 78/189 (41%), Positives = 117/189 (61%), Gaps = 5/189 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHNI + D + SF W+ K+ E++ +++G + I +KP
Sbjct: 4 KLIVGLGNPGAEYRNTRHNIAWETFDNL-SFAQNLRWQSKYKGEMATTEIEGEKVIFLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ + NF+K+P +E+ LV+HD+LDL+FGT+ K GGG AGHNGLKSI++
Sbjct: 63 QTFMNLSGESVAPLANFFKIP-VEDILVVHDELDLNFGTIAYKDGGGLAGHNGLKSIAQC 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +N+KRLR+GIGRP + VL + + FL + A+++ ++ S
Sbjct: 122 LGKQNFKRLRVGIGRPVH-GSVSNWVLSGYHGEDAEFLESYLKGAAKAVEAYIEKGFQSA 180
Query: 181 LNHIVSVRK 189
S +K
Sbjct: 181 -ARTYSKKK 188
>gi|148265700|ref|YP_001232406.1| peptidyl-tRNA hydrolase [Geobacter uraniireducens Rf4]
gi|189038152|sp|A5G7R5|PTH_GEOUR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146399200|gb|ABQ27833.1| peptidyl-tRNA hydrolase [Geobacter uraniireducens Rf4]
Length = 191
Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 80/186 (43%), Positives = 113/186 (60%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GFM +DR+ +K F EG G R IL+KP
Sbjct: 4 KLIVGLGNPGPKYQWTRHNAGFMVLDRLSHLTGITVTRKNFSGLCGEGSWQGDRLILLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ E + F+KL +E+ +VIHDDLD+ FG ++LK GGG AGHNGL+S+S++
Sbjct: 64 QTFMNLSGRSVAEALRFHKL-TVEDLIVIHDDLDIPFGRVKLKAGGGHAGHNGLRSLSQE 122
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + R+R+GIGRP ++ +VL NFS E L ++D I L +L
Sbjct: 123 LGSGAFLRVRMGIGRPLH-GDVVNYVLSNFSPEEMIGLPRLLDGIVDLLEMLITEGLPKT 181
Query: 181 LNHIVS 186
++ +
Sbjct: 182 MSLYNN 187
>gi|309806980|ref|ZP_07700962.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LactinV 03V1-b]
gi|308166600|gb|EFO68797.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LactinV 03V1-b]
Length = 185
Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 102/187 (54%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM ID + K+KF + ++ G IL++
Sbjct: 1 MKLIVGLGNPGLKYQKTKHNTGFMAIDYYLKKNGLSFNKEKFEGFWIKTKIKGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++++F+K+ + + LVIHDD+D+ +RL+ G GHNG+KSI
Sbjct: 61 PQTYMNDSGKSVTQLVDFFKI-DAHDILVIHDDMDMPVAKIRLRKSGKSGGHNGIKSIIH 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ RL+IGI P ++ VL FSS + + +++ + + +
Sbjct: 120 CLNDSEFNRLKIGIDHPT-KETVVSWVLTPFSSEDCTKMEATFATVSQIIDDFIDNKSIE 178
Query: 180 F-LNHIV 185
F +N
Sbjct: 179 FLMNKYN 185
>gi|58336611|ref|YP_193196.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus NCFM]
gi|227903168|ref|ZP_04020973.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus ATCC 4796]
gi|68052870|sp|Q5FMA9|PTH_LACAC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|58253928|gb|AAV42165.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus NCFM]
gi|227868973|gb|EEJ76394.1| peptidyl-tRNA hydrolase [Lactobacillus acidophilus ATCC 4796]
Length = 185
Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y + +HN GFM +D K KF ++ +++G I ++
Sbjct: 1 MKIIAGLGNPGQKYDKTKHNTGFMTMDHYLDKKGLTLNKDKFEGHWTKEKINGEDVIFLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++ NF+K+ E+ L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNESGRSVSQIANFFKVAP-EDVLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGI P + A ++ VL F+ ++ + D + D
Sbjct: 120 DLGTEKFNRLKIGIRHPKN-ATVVSWVLTPFNDEQQKLMDDAFDTSVDIIDDFIAGRDSQ 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNKYN 185
>gi|118619724|ref|YP_908056.1| peptidyl-tRNA hydrolase [Mycobacterium ulcerans Agy99]
gi|166229426|sp|A0PW66|PTH_MYCUA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118571834|gb|ABL06585.1| peptidyl-tRNA hydrolase Pth [Mycobacterium ulcerans Agy99]
Length = 191
Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 78/187 (41%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG Y RHN+GFM D + + K+ AE+ G+L +L K
Sbjct: 5 LLVVGLGNPGENYARTRHNLGFMVADLLAARLGAKFKVHKRSGAEVVTGRLAQRSVVLAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ +MN SG+ + + FY +P + +VIHD+LDLDFG +RLK GGG+ GHNGL+S++
Sbjct: 65 PRCYMNESGRQVAPLAKFYSVPPA-DLIVIHDELDLDFGRIRLKFGGGEGGHNGLRSVAA 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G KN++R+RIGIGRPP VL NFSSPER + I + A + LL +
Sbjct: 124 ALGTKNFQRVRIGIGRPPGRKDPATFVLENFSSPERPEVPTICEQAADATELLVEVGLEP 183
Query: 180 FLNHIVS 186
N + +
Sbjct: 184 AQNRVHA 190
>gi|34499511|ref|NP_903726.1| peptidyl-tRNA hydrolase [Chromobacterium violaceum ATCC 12472]
gi|46576721|sp|Q7NQT1|PTH_CHRVO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|34105361|gb|AAQ61716.1| aminoacyl-tRNA hydrolase [Chromobacterium violaceum ATCC 12472]
Length = 193
Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 71/189 (37%), Positives = 103/189 (54%), Gaps = 3/189 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF +D + F + KFH +++ Q++G L+KP
Sbjct: 6 LIVGLGNPGPEYEKTRHNAGFWLVDELCWQFKGNWRSEGKFHGDVARIQIEGQDVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSGQ++L + +FYK+ E LV+HD+LDL G R K GGG GHNGLK I+ +
Sbjct: 66 MTYMNLSGQAVLALAHFYKILPDE-ILVVHDELDLAPGVARFKQGGGHGGHNGLKDIAAR 124
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ RLR+GIG P D + VL + E+ L + R LP +
Sbjct: 125 LSSPAFWRLRLGIGHPGDKKEVANFVLKKPRAEEQQALDEAVLASLRELPRAVSGKMAEA 184
Query: 181 LNHIVSVRK 189
+ + + K
Sbjct: 185 MKALHTEAK 193
>gi|68536581|ref|YP_251286.1| peptidyl-tRNA hydrolase [Corynebacterium jeikeium K411]
gi|68264180|emb|CAI37668.1| pthA [Corynebacterium jeikeium K411]
Length = 209
Score = 219 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 66/173 (38%), Positives = 101/173 (58%), Gaps = 5/173 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA---WKKKFHAEISEGQLDGLRTIL 58
+++ GLGNPG +Y RHN+G M I + A KK + +I+E ++ G + +L
Sbjct: 31 WLIVGLGNPGDKYANTRHNVGRMVIGELLDRQVPAASLNTHKKTNTDIAEVKIAGRKVVL 90
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+P+TFMN+SG + ++ F+K+P EN +V +DDL+ D G ++L+ GGD GHNGLKSI
Sbjct: 91 AQPRTFMNVSGGPVQQLAAFFKIP-AENIIVAYDDLEGDPGAVKLRQSGGDKGHNGLKSI 149
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
++ G K+Y RL GIGRPP +VL F E + + + A +
Sbjct: 150 TKSLGTKDYWRLSCGIGRPPGRMDPAAYVLKPFPKSEAAEVAIMCADAADEVE 202
>gi|304387894|ref|ZP_07370068.1| aminoacyl-tRNA hydrolase [Neisseria meningitidis ATCC 13091]
gi|304338159|gb|EFM04295.1| aminoacyl-tRNA hydrolase [Neisseria meningitidis ATCC 13091]
Length = 192
Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D + +KKF E++ L L+K
Sbjct: 6 KMLVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARAALPDGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PTTFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K G +Y RLR+GIG P D ++ +VL S+ R + + +++P + +
Sbjct: 125 KLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRRQIDDAVAKSLQAIPDILADKCEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 ATRFLHS 191
>gi|76809605|ref|YP_332165.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 1710b]
gi|124384025|ref|YP_001027483.1| peptidyl-tRNA hydrolase [Burkholderia mallei NCTC 10229]
gi|126439060|ref|YP_001057620.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 668]
gi|126448794|ref|YP_001082449.1| peptidyl-tRNA hydrolase [Burkholderia mallei NCTC 10247]
gi|126453669|ref|YP_001064866.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 1106a]
gi|134279603|ref|ZP_01766315.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 305]
gi|167718013|ref|ZP_02401249.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei DM98]
gi|167822664|ref|ZP_02454135.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 9]
gi|167844235|ref|ZP_02469743.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei B7210]
gi|167892745|ref|ZP_02480147.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 7894]
gi|167909459|ref|ZP_02496550.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 112]
gi|167917487|ref|ZP_02504578.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei BCC215]
gi|217419442|ref|ZP_03450948.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei 576]
gi|226199544|ref|ZP_03795101.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei Pakistan 9]
gi|237810770|ref|YP_002895221.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei MSHR346]
gi|242317999|ref|ZP_04817015.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei 1106b]
gi|254181867|ref|ZP_04888464.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 1655]
gi|254196577|ref|ZP_04903001.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei S13]
gi|254261190|ref|ZP_04952244.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei 1710a]
gi|254357506|ref|ZP_04973780.1| peptidyl-tRNA hydrolase [Burkholderia mallei 2002721280]
gi|119390918|sp|Q3JW88|PTH_BURP1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199313|sp|A3MQB3|PTH_BURM7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199314|sp|A2S6B4|PTH_BURM9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199316|sp|A3NR95|PTH_BURP0 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199317|sp|A3N5J9|PTH_BURP6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|76579058|gb|ABA48533.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 1710b]
gi|124292045|gb|ABN01314.1| aminoacyl-tRNA hydrolase [Burkholderia mallei NCTC 10229]
gi|126218553|gb|ABN82059.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei 668]
gi|126227311|gb|ABN90851.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 1106a]
gi|126241664|gb|ABO04757.1| aminoacyl-tRNA hydrolase [Burkholderia mallei NCTC 10247]
gi|134248803|gb|EBA48885.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 305]
gi|148026570|gb|EDK84655.1| peptidyl-tRNA hydrolase [Burkholderia mallei 2002721280]
gi|169653320|gb|EDS86013.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei S13]
gi|184212405|gb|EDU09448.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 1655]
gi|217396746|gb|EEC36762.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei 576]
gi|225928425|gb|EEH24455.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei Pakistan 9]
gi|237506418|gb|ACQ98736.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei MSHR346]
gi|242141238|gb|EES27640.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei 1106b]
gi|254219879|gb|EET09263.1| aminoacyl-tRNA hydrolase [Burkholderia pseudomallei 1710a]
Length = 201
Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLFGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQ+++ + +F+K+ E LV HD+LDL G +LK GGG GHNGLK IS
Sbjct: 63 PQTYMNRSGQAVVALAHFFKILPTE-ILVAHDELDLPPGAAKLKLGGGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRKDEQDLIDAAIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P K E + +
Sbjct: 182 PTAIKGETERAMMQLH 197
>gi|149013379|ref|ZP_01834088.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP19-BS75]
gi|182682975|ref|YP_001834722.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CGSP14]
gi|303254906|ref|ZP_07340991.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae BS455]
gi|303259731|ref|ZP_07345707.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP-BS293]
gi|303262198|ref|ZP_07348143.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP14-BS292]
gi|303265394|ref|ZP_07351301.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae BS397]
gi|303266058|ref|ZP_07351952.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae BS457]
gi|303268466|ref|ZP_07354260.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae BS458]
gi|238691173|sp|B2IQZ3|PTH_STRPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|147762902|gb|EDK69850.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP19-BS75]
gi|182628309|gb|ACB89257.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae CGSP14]
gi|301800978|emb|CBW33639.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae INV200]
gi|302598177|gb|EFL65238.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae BS455]
gi|302636838|gb|EFL67328.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP14-BS292]
gi|302639283|gb|EFL69742.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae SP-BS293]
gi|302641967|gb|EFL72320.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae BS458]
gi|302644362|gb|EFL74615.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae BS457]
gi|302645071|gb|EFL75311.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae BS397]
gi|332077812|gb|EGI88271.1| peptidyl-tRNA hydrolase [Streptococcus pneumoniae GA41301]
Length = 189
Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y E +HN+GFM ID++ K F A+++ L+G + L+K
Sbjct: 3 KLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++++ L+I+DDLD++ G +RL+ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVHALLTYYGL-DIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQ 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + + R++IGIGRP + ++ HVL F + +L +D + S+ L ++
Sbjct: 122 HIGTHVFNRVKIGIGRPKNGMSVVHHVLSKFDRDDYIGILQSVDKVDDSVNYYLQEKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQRYN 188
>gi|295675402|ref|YP_003603926.1| peptidyl-tRNA hydrolase [Burkholderia sp. CCGE1002]
gi|295435245|gb|ADG14415.1| peptidyl-tRNA hydrolase [Burkholderia sp. CCGE1002]
Length = 201
Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats.
Identities = 66/196 (33%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN G +D++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGCWLVDQLAREAGTTLRDERRFHGFYAKARLHGEEVHLLQ 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ + F+K+ E LV HD+LD+ G+++LK GGG GHNGLK IS
Sbjct: 63 PQTYMNRSGQSVVALAQFFKILPDE-ILVAHDELDMPPGSVKLKLGGGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + +VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANYVLKPPRREEQEVIDASIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P + K E + +
Sbjct: 182 PQIIKGELERAMMQLH 197
>gi|281423252|ref|ZP_06254165.1| aminoacyl-tRNA hydrolase [Prevotella oris F0302]
gi|281402588|gb|EFB33419.1| aminoacyl-tRNA hydrolase [Prevotella oris F0302]
Length = 190
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 68/188 (36%), Positives = 97/188 (51%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG EY + RHN GFM +D ++ K + I+E + G + IL+KP
Sbjct: 4 FLICGLGNPGDEYQDTRHNTGFMVLDAFAKASNI-HFEDKRYGYIAETTIKGRKFILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + + LVI DD+ L G RLK G + GHNGL +I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENIVQ-SHLLVISDDIALPLGAFRLKANGSNGGHNGLGNIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G++Y RLR+GIG + VLG + + E L P ID + A +
Sbjct: 122 IGQDYARLRMGIGNEYPKGGQVDWVLGKYDADEMKRLQPSIDIACEIIKSFALAGINITM 181
Query: 182 NHIVSVRK 189
N + K
Sbjct: 182 NQFNKLGK 189
>gi|325912447|ref|ZP_08174842.1| aminoacyl-tRNA hydrolase [Lactobacillus iners UPII 143-D]
gi|325475789|gb|EGC78960.1| aminoacyl-tRNA hydrolase [Lactobacillus iners UPII 143-D]
Length = 185
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 102/187 (54%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM ID + K+KF + ++ G IL++
Sbjct: 1 MKLIVGLGNPGVKYQKTKHNTGFMAIDYYLKKNGLSFNKEKFEGFWIKTKIKGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++++F+K+ + + LVIHDD+D+ +RL+ G GHNG+KSI
Sbjct: 61 PQTYMNDSGKSVTQLVDFFKI-DAHDILVIHDDMDMPVAKIRLRKSGKSGGHNGIKSIIH 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ RL+IGI P ++ VL FSS + + +++ + + +
Sbjct: 120 CLNDSEFNRLKIGIDHPT-KETVVSWVLTPFSSEDCTKMEATFATVSQIIDDFIDNKSIE 178
Query: 180 F-LNHIV 185
F +N
Sbjct: 179 FLMNKYN 185
>gi|284033575|ref|YP_003383506.1| peptidyl-tRNA hydrolase [Kribbella flavida DSM 17836]
gi|283812868|gb|ADB34707.1| peptidyl-tRNA hydrolase [Kribbella flavida DSM 17836]
Length = 191
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKF-HAEISEGQLDGLRTILIK 60
++V GLGNPG Y + RHN+G D + + K AE+ E ++ G RT+L K
Sbjct: 6 WLVVGLGNPGPTYAKTRHNVGQSVADELAGRVGGGWKQHKQARAEVIETRIGGARTVLAK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+++MN SG + ++ F+K+ + +HD+LDLDF TLR+K GGGD GHNGL+SI +
Sbjct: 66 PRSYMNESGGPVAGLLRFFKVEPA-QLIAVHDELDLDFATLRVKFGGGDNGHNGLRSIRK 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y R+R G+GRPP + VL FS+ ER L +D A ++ L
Sbjct: 125 SVGTGDYHRVRFGVGRPPGRQNPADFVLNEFSAAERKDLPFALDRTADAVESLIADGLEV 184
Query: 180 FLNHIVS 186
S
Sbjct: 185 TQGKYNS 191
>gi|300871524|ref|YP_003786397.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli 95/1000]
gi|300689225|gb|ADK31896.1| putative peptidyl tRNA hydrolase [Brachyspira pilosicoli 95/1000]
Length = 198
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 105/186 (56%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG EY +RHNIGF+ ID++ K + + +L+ IL+KP
Sbjct: 3 KLVIGLGNPGEEYKNHRHNIGFIIIDKLAQNLSLKFDNNKKKSLFTRAKLNNTDFILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S + + F+ + E+ +VI+DD+D+ FGT ++K GG GHNG+KS+ +
Sbjct: 63 QTFMNLSGESAIYISKFFNIKP-EDIIVIYDDMDIPFGTFKIKKGGSSGGHNGIKSLIAQ 121
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII-DNIARSLPLLAKREDVS 179
++ RLR+GIGRP + +VL +FS ER + + +N+ ++ +
Sbjct: 122 LQTDDFIRLRVGIGRPSFGKKVNDYVLSSFSKSERENIDNDLGENVIEAIKTILFESYTI 181
Query: 180 FLNHIV 185
N
Sbjct: 182 AQNKYN 187
>gi|289663465|ref|ZP_06485046.1| peptidyl-tRNA hydrolase [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 193
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 94/189 (49%), Gaps = 3/189 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D + A K E ++ + G L+KP
Sbjct: 6 LIVGLGNPGPEHAQTRHNAGFRFVDALIERSGARWALDSKLFGETAKVDIAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E+ LV HD+LDL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSVAAALRFWKIEP-EHLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG + + I LPL +
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVSWVLGRAGREDDAAIGTAIAAAIDVLPLAMEGNFSEA 184
Query: 181 LNHIVSVRK 189
+ + + +K
Sbjct: 185 MKRLHTEKK 193
>gi|187922590|ref|YP_001894232.1| peptidyl-tRNA hydrolase [Burkholderia phytofirmans PsJN]
gi|238689574|sp|B2SXG3|PTH_BURPP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|187713784|gb|ACD15008.1| Aminoacyl-tRNA hydrolase [Burkholderia phytofirmans PsJN]
Length = 200
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLVDQLAREAGTTLRDERRFHGFYAKARLHGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ V F+K+ E LV HD+LDL G+++LK GGG GHNGLK I+
Sbjct: 63 PQTYMNRSGQSVVAVAQFFKILPDE-ILVAHDELDLPPGSIKLKLGGGSGGHNGLKDITA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + +VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANYVLKPPRREEQDVIDASIERGLAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P + K E + +
Sbjct: 182 PQIIKGELERAMMQLH 197
>gi|17545112|ref|NP_518514.1| peptidyl-tRNA hydrolase [Ralstonia solanacearum GMI1000]
gi|17427403|emb|CAD13921.1| peptidyl-trna hydrolase (pth) protein [Ralstonia solanacearum
GMI1000]
Length = 217
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ H + +FH + L L++
Sbjct: 20 KLIVGLGNPGAEYAATRHNAGFWLVDQLARMGHVTLRNETRFHGYAARATLWSHEVWLLQ 79
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG + + + FYK+ E LV+HD+LDL G ++LK GGG GHNGLK I+
Sbjct: 80 PQTFMNRSGLATVALARFYKILPDE-ILVVHDELDLLPGAVKLKLGGGSGGHNGLKDIAA 138
Query: 121 KC-GKNYKRLRIGIGR----------PPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ + RLR+GIG P + VL E+ + ID +L
Sbjct: 139 HLTTQQFWRLRVGIGHPRNLLPPGTAPSGQHDVANFVLKAPRREEQELIDRAIDRSLDAL 198
Query: 170 PLLAKREDVSFLNHIVS 186
P L + + +
Sbjct: 199 PDLVAGNAERAMMRLHT 215
>gi|300692632|ref|YP_003753627.1| peptidyl-tRNA hydrolase [Ralstonia solanacearum PSI07]
gi|299079692|emb|CBJ52369.1| peptidyl-tRNA hydrolase [Ralstonia solanacearum PSI07]
Length = 200
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ H + +FH + L G L++
Sbjct: 3 KLIVGLGNPGAEYAATRHNAGFWLVDQLARMGHVTLRNETRFHGYAARATLWGHEVWLLQ 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG + + + FYK+ E LV HD+LDL G ++LK GGG GHNGLK I+
Sbjct: 63 PQTFMNRSGLATVALARFYKILPDE-ILVAHDELDLPPGAVKLKLGGGSGGHNGLKDIAA 121
Query: 121 KC-GKNYKRLRIGIGR----------PPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ + RLR+GIG P + VL E+ + ID +L
Sbjct: 122 HLTTQQFWRLRLGIGHPRNLLPPGTAPSGQHDVANFVLKAPRREEQELIDRAIDRSLDAL 181
Query: 170 PLLAKREDVSFLNHIVS 186
P L + + +
Sbjct: 182 PDLVGGNAERAMMRLHT 198
>gi|227894500|ref|ZP_04012305.1| peptidyl-tRNA hydrolase [Lactobacillus ultunensis DSM 16047]
gi|227863659|gb|EEJ71080.1| peptidyl-tRNA hydrolase [Lactobacillus ultunensis DSM 16047]
Length = 185
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y + +HN GFM +D + K KF ++ +++G IL++
Sbjct: 1 MKIIAGLGNPGQKYDKTKHNTGFMTMDHYLNEKGLSLDKDKFEGHWTKQKVNGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ +V NF+K+ + E+ L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNESGRSVSQVANFFKV-DPEDVLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGI P + A ++ VL F+ ++ + D + + D
Sbjct: 120 DLGTEKFNRLKIGIRHPKN-ATVVSWVLTPFNDEQQKLMDDAFDTSVKIIDDFIAGHDSQ 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNKYN 185
>gi|197335071|ref|YP_002155524.1| peptidyl-tRNA hydrolase [Vibrio fischeri MJ11]
gi|226709072|sp|B5FBW5|PTH_VIBFM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|197316561|gb|ACH66008.1| peptidyl-tRNA hydrolase [Vibrio fischeri MJ11]
Length = 196
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G ++ + H + KF Q +G L+
Sbjct: 6 KLLVGLANPGLEYKRTRHNAGAWVVEELARVHNVSMREESKFFGLTGRIQSNGDDLRLLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+ + + FY++ E LV HD+LDL G + K GGG GHNGL+
Sbjct: 66 PTTFMNLSGKGIAAMAKFYQIKP-EEILVAHDELDLPPGVAKFKKGGGHGGHNGLRDTIS 124
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K K + RLRIGIG P + VLG + E+ + +D R L +L K
Sbjct: 125 KLANTKEFYRLRIGIGHPGHKDKVAGFVLGKAPTKEQELIDAAVDESTRCLDILLKDGLS 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|68052869|sp|Q5FFA3|PTH_EHRRG RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 193
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 83/190 (43%), Positives = 114/190 (60%), Gaps = 4/190 (2%)
Query: 1 MF-IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG EY RHN+GFM ID I FP +KKK +A IS G + + IL
Sbjct: 1 MLHLLVGLGNPGKEYELTRHNVGFMIIDAIMHHFLFPDFKKKHNALISSGSIQSYKVILA 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG + ++ YK+P L+N +V HD+ D+DF T+R+K GGG+AGHNGLKSI
Sbjct: 61 KPYTFMNNSGAPISSIVKLYKIP-LDNIIVFHDETDIDFCTIRIKKGGGNAGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G++Y R+R GIG P + + HVL F++ + I NI + LL + +
Sbjct: 120 TLLGRDYWRIRFGIGHPSNGYDLSYHVLSQFNN--LNAVNNTISNIIEHISLLFENDKSI 177
Query: 180 FLNHIVSVRK 189
F N + + K
Sbjct: 178 FKNKVKDLIK 187
>gi|290967809|ref|ZP_06559362.1| aminoacyl-tRNA hydrolase [Megasphaera genomosp. type_1 str. 28L]
gi|290782168|gb|EFD94743.1| aminoacyl-tRNA hydrolase [Megasphaera genomosp. type_1 str. 28L]
Length = 188
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 96/187 (51%), Gaps = 1/187 (0%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG EY +HN GFM +D + + W++K A ++ G +L+KPQ
Sbjct: 1 MIVGLGNPGREYENTKHNTGFMTVDALAADMGADRWQQKMAALVASVSFRGETILLVKPQ 60
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG+++ +M +YKL +++DD+DL G LR++ G D GHNG+KSI
Sbjct: 61 TYMNDSGRAVGPLMRWYKLAEP-QVYIVYDDMDLPVGRLRIRKSGSDGGHNGIKSIFANG 119
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
+ R RIGIGRP ++ HVL F+ + ++ + +N
Sbjct: 120 CTEFIRFRIGIGRPLPQWSVVDHVLAPFTPDVLPAFQEGVAAAVAAIKGCLELGVDKGMN 179
Query: 183 HIVSVRK 189
+K
Sbjct: 180 RFNPKKK 186
>gi|289449607|ref|YP_003474745.1| aminoacyl-tRNA hydrolase [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184154|gb|ADC90579.1| aminoacyl-tRNA hydrolase [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 192
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 63/179 (35%), Positives = 102/179 (56%), Gaps = 2/179 (1%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
+ GLGNPG +YC HN GFM ++ + + P K + I +G + G T+L+ PQT
Sbjct: 7 IVGLGNPGPKYCRTWHNCGFMALEYLAQKYDIPIRTAKHKSLIGKGIIVGKPTLLVCPQT 66
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
FMNLSG+++ + +FYKLP L+ ++++DDLDL G RL+ G HNG++SI ++ G
Sbjct: 67 FMNLSGEAVRAIRDFYKLP-LDKIMIVYDDLDLPVGATRLRLQGSAGTHNGMRSIVQQLG 125
Query: 124 K-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
++ R+R+GIG P+ ++ +VL + L I++ A L + S +
Sbjct: 126 SGDFPRMRLGIGPKPEYLPLVDYVLSKVGKAQEKPLFAAIEHAAAGLEAWLSGDIDSAM 184
>gi|326507536|dbj|BAK03161.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 237
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 68/181 (37%), Positives = 91/181 (50%), Gaps = 3/181 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GF ID F A EG +DG+ +L KP
Sbjct: 38 WLFIGLGNPGEKYQSTRHNVGFDMIDAFAESQGISLTTHHFKALFGEGVVDGVPVLLAKP 97
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT++NLSG+S + +YKLP L +V +DD DL G LRL+ GG HNGLKS+
Sbjct: 98 QTYINLSGESAGALAAYYKLP-LHRVIVAYDDTDLPCGVLRLQPKGGYGRHNGLKSVIYH 156
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RLRIGIGRPP VL F+ R + I L ++ +
Sbjct: 157 FRKNREFGRLRIGIGRPPGQMDPKAFVLQKFNKTGRERIDSAIKEGCGILKMVVTKGLTE 216
Query: 180 F 180
Sbjct: 217 A 217
>gi|319940807|ref|ZP_08015146.1| peptidyl-tRNA hydrolase [Sutterella wadsworthensis 3_1_45B]
gi|319805689|gb|EFW02470.1| peptidyl-tRNA hydrolase [Sutterella wadsworthensis 3_1_45B]
Length = 217
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GF +D + ++KF E + ++ G L+KP
Sbjct: 10 LIVGLGNPGPDYVRTRHNAGFRFVDMLAGKLGAHFHEERKFQGETARCRIAGHEVWLLKP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ + N++K+ E LV HD++DL G +R+K GGG+AGHNGLKSI+++
Sbjct: 70 LTFMNASGEAVSVMANYFKITPAE-VLVAHDEMDLLPGCMRIKKGGGNAGHNGLKSITQQ 128
Query: 122 CGK-NYKRLRIGIGRP---PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G ++ RLR+GIG P + VL SS + + PL A+ E
Sbjct: 129 LGTPDFWRLRLGIGHPRTLGLAQQVFDFVLSAPSSEHEEAIRTCALAALETAPLWAEGEM 188
Query: 178 VSFLNHIVSV 187
I +
Sbjct: 189 EKAHRAIAAF 198
>gi|291278877|ref|YP_003495712.1| peptidyl-tRNA hydrolase PTH1 family [Deferribacter desulfuricans
SSM1]
gi|290753579|dbj|BAI79956.1| peptidyl-tRNA hydrolase, PTH1 family [Deferribacter desulfuricans
SSM1]
Length = 192
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 111/187 (59%), Gaps = 7/187 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG EY + RHNIGFM +D + S+ +K F E + + +KP
Sbjct: 1 MIVGLGNPGKEYAKTRHNIGFMVLDEVASYFNVN-FKSGFKGVYGEYK----NWLFLKPF 55
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG+S+ E+++FYK+ N+E+ LVIHDDLD+DFG ++ K GG D GHNG++SI
Sbjct: 56 TYMNRSGESVKEIVDFYKI-NVEDILVIHDDLDMDFGKIKFKKGGSDGGHNGIRSIINHL 114
Query: 123 -GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
++ R +IGI +P + + ++VL F+S E+ L ++ ++ + + +
Sbjct: 115 DSTDFYRFKIGISKPLRSEYTSKYVLAEFNSFEKKVLPDLLVLCRNAIQCFIESGAKAAM 174
Query: 182 NHIVSVR 188
N+ + +
Sbjct: 175 NNFNNKK 181
>gi|46576747|sp|Q7VMI1|PTH_HAEDU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 194
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y RHN G ++ + + + K+ + ++ L+
Sbjct: 5 KLIVGLANPGAKYEGTRHNAGEWLVNELARMYNTSLKDEAKYFGKTAKINTVNGDVWLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ E L+ HD+LDL G +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALAHFFRIK-AEEILIAHDELDLPPGVAKLKQGGGHGGHNGLKDIIS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N + R+R+GIG P + +VL + ++ + +ID +R L +L K
Sbjct: 124 ALGNNNNFYRIRLGIGHPGHKDQVAGYVLSKPAPQDQQKINAVIDEASRCLEILFKDGVT 183
Query: 179 SFLNHIVSVR 188
S N + S +
Sbjct: 184 SATNRLNSFK 193
>gi|86149181|ref|ZP_01067413.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88597200|ref|ZP_01100435.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 84-25]
gi|157414609|ref|YP_001481865.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 81116]
gi|218561971|ref|YP_002343750.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|14195085|sp|Q9PII7|PTH_CAMJE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|172047038|sp|A8FKA1|PTH_CAMJ8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|85840539|gb|EAQ57796.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88190261|gb|EAQ94235.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 84-25]
gi|112359677|emb|CAL34463.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|157385573|gb|ABV51888.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 81116]
gi|284925584|gb|ADC27936.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni IA3902]
gi|315928387|gb|EFV07701.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315930529|gb|EFV09572.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 305]
gi|315931611|gb|EFV10577.1| Aminoacyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 327]
Length = 181
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 78/189 (41%), Positives = 112/189 (59%), Gaps = 10/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M +V GLGN G EY RHN+GFM ID + F KF E+ + G +L+
Sbjct: 1 MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFKGELFKI---GSSLLLL 57
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG S+ V +FYK E +VIHDD+D++ G LR K GG GHNGLKSI
Sbjct: 58 KPSTYMNNSGLSVKAVNDFYKC---ERMIVIHDDIDINLGALRFKKGGSSGGHNGLKSID 114
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG +Y+R+RIG+G+ ++I HVLG F S E L ++++ ++L L + +D+S
Sbjct: 115 TLCGNDYERVRIGVGK---GENVISHVLGKFKSEEEITLSKVLEHAKKALLELIENDDLS 171
Query: 180 FLNHIVSVR 188
++ S++
Sbjct: 172 AISSKYSLK 180
>gi|163783323|ref|ZP_02178316.1| peptidyl-tRNA hydrolase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881431|gb|EDP74942.1| peptidyl-tRNA hydrolase [Hydrogenivirga sp. 128-5-R1-1]
Length = 192
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 2/180 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+V GLGNPG EY RHN+GFM ID + +++ + + ++ G +L KPQ
Sbjct: 4 LVVGLGNPGKEYENTRHNVGFMVIDELVRRLKLKHHREEGLSHVYRTKIAGREVLLAKPQ 63
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG +++ ++ + E LVI+DDLDL G RL+ G GH G++SI +
Sbjct: 64 TYMNNSGLAVVNLLEDNGIEPRE-MLVIYDDLDLPLGVTRLRLEGSSGGHRGVESIVKNI 122
Query: 123 -GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
+ + RL+IGIGRP + ++ +VL FS E + +I A + + +
Sbjct: 123 KTEKFPRLKIGIGRPKNKRDVVNYVLSPFSKEEEEVVRAVIKKAAECVLRSIELSPQDAM 182
>gi|57238822|ref|YP_179958.1| peptidyl-tRNA hydrolase [Ehrlichia ruminantium str. Welgevonden]
gi|68052874|sp|Q5HC85|PTH_EHRRW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|57160901|emb|CAH57806.1| peptidyl-tRNA hydrolase [Ehrlichia ruminantium str. Welgevonden]
Length = 193
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 83/190 (43%), Positives = 114/190 (60%), Gaps = 4/190 (2%)
Query: 1 MF-IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG EY RHN+GFM ID I FP +KKK +A IS G + + IL
Sbjct: 1 MLHLLVGLGNPGKEYELTRHNVGFMIIDAIMHHFLFPDFKKKHNALISSGSIRSHKVILA 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG + ++ YK+P L+N +V HD+ D+DF T+R+K GGG+AGHNGLKSI
Sbjct: 61 KPYTFMNNSGTPISSIVKLYKIP-LDNIIVFHDETDIDFCTIRIKKGGGNAGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G++Y R+R GIG P + + HVL F++ + I NI + LL + +
Sbjct: 120 TLLGRDYWRIRFGIGHPSNGYDLSYHVLSQFNN--LNAVNNTISNIIEHISLLFENDKSI 177
Query: 180 FLNHIVSVRK 189
F N + + K
Sbjct: 178 FKNKVKDLIK 187
>gi|40889732|pdb|1RYN|A Chain A, Structure Of The Chloroplast Group Ii Intron Splicing
Factor Crs2
Length = 202
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 61/190 (32%), Positives = 103/190 (54%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG++Y RHN+GF +DRI + +F + + G + + +++KP
Sbjct: 6 WLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTNQFKSLLGTGSIGEVPVLVVKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q++MN SG+++ + +Y++P L + L+I+DD L G LRL+ GG HNGL+++ E
Sbjct: 66 QSYMNYSGEAIGPLAAYYQVP-LRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEH 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RL IGIG PP +L FSS ER + ++ ++ L +
Sbjct: 125 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSG 184
Query: 180 FLNHIVSVRK 189
V+K
Sbjct: 185 STERFNLVQK 194
>gi|56460039|ref|YP_155320.1| peptidyl-tRNA hydrolase [Idiomarina loihiensis L2TR]
gi|68052890|sp|Q5QV03|PTH_IDILO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56179049|gb|AAV81771.1| Peptidyl-tRNA hydrolase [Idiomarina loihiensis L2TR]
Length = 198
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 73/189 (38%), Positives = 97/189 (51%), Gaps = 3/189 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D H K A I Q ++
Sbjct: 6 KLLVGLGNPGPEYERTRHNAGFWLVDDFCRRHAITLSPDTKSKALIGRWQQGAHDLRIVL 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ FMN SG S+ + NFYK+P E LV +D+LDL G + K GGG GHNG+K I
Sbjct: 66 PQNFMNRSGFSVAALANFYKIPANE-ILVAYDELDLPPGVAKFKKGGGAGGHNGIKDIIA 124
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +++ RLRIGIG P D + VLG S+ E+ + ID +RS+ L +
Sbjct: 125 QTGSQDFMRLRIGIGHPGDKTKVTGFVLGKASANEQRLIDDCIDEASRSIDTLMAEGWGT 184
Query: 180 FLNHIVSVR 188
L + S R
Sbjct: 185 ALQRLHSYR 193
>gi|291296895|ref|YP_003508293.1| peptidyl-tRNA hydrolase [Meiothermus ruber DSM 1279]
gi|290471854|gb|ADD29273.1| peptidyl-tRNA hydrolase [Meiothermus ruber DSM 1279]
Length = 192
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 66/194 (34%), Positives = 104/194 (53%), Gaps = 12/194 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT---- 56
MF++ G GNPG +Y +HN+GF +DR+ ++ K HA ++E +L G
Sbjct: 1 MFLIVGQGNPGLQYARTKHNVGFWVLDRL-----GSDFRPKGHALVTEIKLQGPSGEWVS 55
Query: 57 -ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L+KP TF N +G+++ + +Y++P E LV+HD+LDL G LR K GG +AG+ GL
Sbjct: 56 GLLVKPTTFYNATGEAVAPLARYYRVPP-ERILVVHDELDLPPGRLRFKAGGSNAGNYGL 114
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+SI+ G +++ RLRIGIG+PP VL F + +I A + L A
Sbjct: 115 ESITAHLGTRDFHRLRIGIGKPPSPEAGAGWVLSGFHPEVVPIMDKVISTAAEAAKLWAT 174
Query: 175 REDVSFLNHIVSVR 188
+ ++
Sbjct: 175 EGLEAAQKKYNGLK 188
>gi|259500995|ref|ZP_05743897.1| aminoacyl-tRNA hydrolase [Lactobacillus iners DSM 13335]
gi|302190556|ref|ZP_07266810.1| peptidyl-tRNA hydrolase [Lactobacillus iners AB-1]
gi|312871531|ref|ZP_07731624.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LEAF 3008A-a]
gi|259167689|gb|EEW52184.1| aminoacyl-tRNA hydrolase [Lactobacillus iners DSM 13335]
gi|311092926|gb|EFQ51277.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LEAF 3008A-a]
Length = 185
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 102/187 (54%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM ID + K+KF + ++ G IL++
Sbjct: 1 MKLIVGLGNPGLKYQKTKHNTGFMAIDYYLKKNGLSFNKEKFEGFWIKTKIKGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++++F+K+ + + LVIHDD+D+ +RL+ G GHNG+KSI
Sbjct: 61 PQTYMNDSGKSVTQLVDFFKI-DAHDILVIHDDMDMPVAKIRLRKSGKSGGHNGIKSIIN 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ RL+IGI P ++ VL FSS + + +++ + + +
Sbjct: 120 CLNDSEFNRLKIGIDHPT-KETVVSWVLTPFSSEDCTKMEATFATVSQIIDDFIDNKSIE 178
Query: 180 F-LNHIV 185
F +N
Sbjct: 179 FLMNKYN 185
>gi|114319447|ref|YP_741130.1| peptidyl-tRNA hydrolase [Alkalilimnicola ehrlichii MLHE-1]
gi|119390908|sp|Q0ABZ7|PTH_ALHEH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|114225841|gb|ABI55640.1| peptidyl-tRNA hydrolase [Alkalilimnicola ehrlichii MLHE-1]
Length = 197
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN GF +D + H ++++HA+++ L + L++P
Sbjct: 10 LIVGLGNPGDRYAGTRHNAGFWLLDELLRRHGGALRPERRYHADLATLHLGPHQCRLMRP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SGQ++ F++LP E+ LV+HD++DL G ++LK GGG GHNGL+ I
Sbjct: 70 QTYMNRSGQAVGPYAQFFRLPP-ESILVVHDEIDLPPGQVKLKQGGGHGGHNGLRDIIRA 128
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R RIG+G P ++ +VL + ER + ++ +A + L +
Sbjct: 129 LGNERGFCRARIGVGHPGHRDGVVPYVLSRPAPDERRAIADAVEELADCVEWLLAGDWGR 188
Query: 180 FLNHIVS 186
+ S
Sbjct: 189 ACQRLHS 195
>gi|251793996|ref|YP_003008728.1| peptidyl-tRNA hydrolase [Aggregatibacter aphrophilus NJ8700]
gi|247535395|gb|ACS98641.1| peptidyl-tRNA hydrolase [Aggregatibacter aphrophilus NJ8700]
Length = 194
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I R+ + KF + + ++ +
Sbjct: 5 KLIVGLGNPGDKYADTRHNAGEWLIARLARRFNVTLNAENKFSGYVGKTLINSKEIRFLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LV+HD+LDL G+++LK GGG GHNGLK I
Sbjct: 65 PMTFMNLSGKAVGALANFYRIKP-EEILVLHDELDLPPGSVKLKLGGGHGGHNGLKDIVA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N + RLRIGIG P + +VL S ER L +D + LL K V
Sbjct: 124 ALGNNNNFYRLRIGIGHPGHRDLVAGYVLNKPSPSEREALEKALDEATSCVELLFKDGIV 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|226365172|ref|YP_002782955.1| peptidyl-tRNA hydrolase [Rhodococcus opacus B4]
gi|254783884|sp|C1AY15|PTH_RHOOB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226243662|dbj|BAH54010.1| peptidyl-tRNA hydrolase [Rhodococcus opacus B4]
Length = 190
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 82/185 (44%), Positives = 116/185 (62%), Gaps = 3/185 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y + RHN+GFM + + KK AEI +G+L+G TIL KP
Sbjct: 7 LVVGLGNPGPQYEKTRHNVGFMVAGVLSARMGGKFSAHKKSGAEIVQGRLEGRPTILAKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
++FMNLSG ++ + F+ + + N +VIHD+LDLDFGT+RLK GGG+ GHNGL+SIS+
Sbjct: 67 RSFMNLSGSAVAGLARFFSV-DPGNIVVIHDELDLDFGTIRLKQGGGEGGHNGLRSISQS 125
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G K+Y R R+GIGRPP +VL FSS ER L + + A ++ L+ + +
Sbjct: 126 LGTKDYLRTRVGIGRPPGRMDPASYVLKPFSSVERKELDLVCEESADAVELVLRLGLEAA 185
Query: 181 LNHIV 185
N +
Sbjct: 186 QNRLH 190
>gi|254431920|ref|ZP_05045623.1| peptidyl-tRNA hydrolase [Cyanobium sp. PCC 7001]
gi|197626373|gb|EDY38932.1| peptidyl-tRNA hydrolase [Cyanobium sp. PCC 7001]
Length = 211
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 66/193 (34%), Positives = 103/193 (53%), Gaps = 8/193 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG Y RHN+GFM ++++ + + H +++ R L+ P
Sbjct: 14 LVVGLGNPGSRYAGTRHNVGFMALEQLVRSAGGSFRQQSRLHGLLADVGQGEQRLRLLMP 73
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+S+ ++++ L E LV+ DD+DL G LRL+ G GHNGL+S
Sbjct: 74 QTFMNDSGRSIRAALDWFSLRPAE-LLVVVDDMDLPLGKLRLRASGSAGGHNGLRSAISH 132
Query: 122 CG-KNYKRLRIGIGRPPD-----TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G +++ RLRIGIG P + A I HVLG FS+ E+ L +++ + + + +
Sbjct: 133 LGTQDFPRLRIGIGAPAENPAERRARTIGHVLGRFSAAEQPCLEAVLNEVEAGIGQIQRL 192
Query: 176 EDVSFLNHIVSVR 188
N + S +
Sbjct: 193 GLERAGNRLNSFQ 205
>gi|330432671|gb|AEC17730.1| peptidyl-tRNA hydrolase [Gallibacterium anatis UMN179]
Length = 195
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G I R+ + KF + + + G L+
Sbjct: 5 KLIVGLGNPGSKYEDTRHNAGEWMIARLARRFSVSLKEENKFFGKTAMATISGKDIRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + NFY++ E LVIHD+LDL G+++LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKSVGALANFYRILP-EEILVIHDELDLPPGSVKLKLGGGHGGHNGLKDIIA 123
Query: 121 KC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ KN+ RLR+GIG P D + +VL + ++ + +D + +L K
Sbjct: 124 QLANNKNFYRLRVGIGHPGDKNLVASYVLSKPAPQDQRLIDKALDEAESCIDILIKDGVE 183
Query: 179 SFLNHIVSVR 188
+N + R
Sbjct: 184 KAMNRLNGFR 193
>gi|168777786|ref|ZP_02802793.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4196]
gi|187767042|gb|EDU30886.1| peptidyl-tRNA hydrolase [Escherichia coli O157:H7 str. EC4196]
Length = 192
Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 90/190 (47%), Gaps = 6/190 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F P HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVAAMASFSAYPTKSG---GHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 120
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 121 KLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLT 180
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 181 KATNRLHAFK 190
>gi|260577724|ref|ZP_05845659.1| aminoacyl-tRNA hydrolase [Corynebacterium jeikeium ATCC 43734]
gi|258604119|gb|EEW17361.1| aminoacyl-tRNA hydrolase [Corynebacterium jeikeium ATCC 43734]
Length = 209
Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats.
Identities = 65/173 (37%), Positives = 101/173 (58%), Gaps = 5/173 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF---FPAWKKKFHAEISEGQLDGLRTIL 58
+++ GLGNPG +Y RHN+G M I + + KK + +I+E ++ G + +L
Sbjct: 31 WLIIGLGNPGDKYANTRHNVGRMVIGELLDRQVPAASLSTHKKTNTDIAEVKIAGRKVVL 90
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+P+TFMN+SG + ++ F+K+P EN +V +DDL+ D G ++L+ GGD GHNGLKSI
Sbjct: 91 AQPRTFMNVSGGPVQQLAAFFKIP-AENIIVAYDDLEGDPGAVKLRQSGGDKGHNGLKSI 149
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
++ G K+Y RL GIGRPP +VL F E + + + A +
Sbjct: 150 TKSLGTKDYWRLSCGIGRPPGRMDPAAYVLKPFPKSEAAEVAIMCADAADEVE 202
>gi|77407704|ref|ZP_00784459.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae COH1]
gi|77173703|gb|EAO76817.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae COH1]
Length = 191
Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 106/190 (55%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HNIGFM +DRI + K F AEI ++G + IK
Sbjct: 3 KMIVGLGNPGSKYNDTKHNIGFMAVDRIVKKLDVNFTEDKNFKAEIGSDFINGEKIYFIK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + ++++ ++I+DDLD++ G +R + G GHNG+KSI
Sbjct: 63 PTTFMNNSGIAVKALLTYYNI-SIKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + + R+++GIGRP +I HVLG F + + +D + ++ L +
Sbjct: 122 HLGTQEFDRIKVGIGRPNGRMTVINHVLGKFDKNDEIMISNTLDKVDNAVNYYLQTNDFQ 181
Query: 179 SFLNHIVSVR 188
+ ++
Sbjct: 182 KTMQKYNGLK 191
>gi|165975491|ref|YP_001651084.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|190149302|ref|YP_001967827.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|303251856|ref|ZP_07338027.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307247009|ref|ZP_07529063.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|307249232|ref|ZP_07531229.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|307256054|ref|ZP_07537842.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 10
str. D13039]
gi|307262615|ref|ZP_07544245.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 13
str. N273]
gi|238687506|sp|B0BRJ2|PTH_ACTPJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238692367|sp|B3GZM3|PTH_ACTP7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|165875592|gb|ABY68640.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|189914433|gb|ACE60685.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|302649286|gb|EFL79471.1| peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|306856461|gb|EFM88610.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|306858756|gb|EFM90815.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|306865476|gb|EFM97371.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 10
str. D13039]
gi|306872038|gb|EFN03752.1| Peptidyl-tRNA hydrolase [Actinobacillus pleuropneumoniae serovar 13
str. N273]
Length = 194
Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL N G +Y + RHN G I+ I ++ KF ++++ G L+
Sbjct: 5 KLIVGLANSGTKYEDTRHNAGEWLINEIARQFNVSLKEEAKFFGKVAKINAAGGEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LV HD+LDL G ++K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALANFYRIKP-EEILVAHDELDLPPGVAKIKQGGGHGGHNGLKDIIA 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N+ R+RIGIG P + +VLG S ++ + +D R + LL K
Sbjct: 124 SLGNSNNFYRVRIGIGHPGSKELVAGYVLGKPSPQDQEKINAAVDEAGRCVDLLLKDGIT 183
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 184 KATNRLNAFK 193
>gi|21263845|sp|Q8Y2E3|PTH_RALSO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 200
Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ H + +FH + L L++
Sbjct: 3 KLIVGLGNPGAEYAATRHNAGFWLVDQLARMGHVTLRNETRFHGYAARATLWSHEVWLLQ 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG + + + FYK+ E LV+HD+LDL G ++LK GGG GHNGLK I+
Sbjct: 63 PQTFMNRSGLATVALARFYKILPDE-ILVVHDELDLLPGAVKLKLGGGSGGHNGLKDIAA 121
Query: 121 KC-GKNYKRLRIGIGR----------PPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ + RLR+GIG P + VL E+ + ID +L
Sbjct: 122 HLTTQQFWRLRVGIGHPRNLLPPGTAPSGQHDVANFVLKAPRREEQELIDRAIDRSLDAL 181
Query: 170 PLLAKREDVSFLNHIVS 186
P L + + +
Sbjct: 182 PDLVAGNAERAMMRLHT 198
>gi|157363318|ref|YP_001470085.1| peptidyl-tRNA hydrolase [Thermotoga lettingae TMO]
gi|172045981|sp|A8F4D7|PTH_THELT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157313922|gb|ABV33021.1| Aminoacyl-tRNA hydrolase [Thermotoga lettingae TMO]
Length = 187
Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats.
Identities = 63/189 (33%), Positives = 101/189 (53%), Gaps = 6/189 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NRHN+GFM +DR F W+ + S+ + L+K
Sbjct: 1 MKVIVGLGNPGPRYAFNRHNVGFMFVDRFKEFKKCSTWQHRDRYTFSQCK----DIFLVK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG ++++ + + + +V++DD+DL G LR+K GG GH GL+SI +
Sbjct: 57 PNTFMNLSGIAVIKCQRDFHVTTT-DIIVVYDDVDLPCGRLRIKAQGGSGGHRGLQSIID 115
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + RLRIGIG P+ + +VL +F+ E + ++D ++ ++
Sbjct: 116 YIGTNEFVRLRIGIGPKPENIDLADYVLEDFTEEELRLIDKVLDKAVEAVDVMLNEGLSK 175
Query: 180 FLNHIVSVR 188
++ S
Sbjct: 176 AMSVFNSYE 184
>gi|225869493|ref|YP_002745440.1| peptidyl-tRNA hydrolase [Streptococcus equi subsp. equi 4047]
gi|254783888|sp|C0M9G4|PTH_STRE4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|225698897|emb|CAW91882.1| peptidyl-tRNA hydrolase [Streptococcus equi subsp. equi 4047]
Length = 189
Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats.
Identities = 58/187 (31%), Positives = 103/187 (55%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG ++ + +HN+GFM +DR+ + K F A I ++ + +K
Sbjct: 3 KMIVGLGNPGSKHQQTKHNVGFMAVDRLVKDLDVSFTEDKTFKALIGSTFINQEKIYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + + ++ +VI+DDLD+ G +RL+ G GHNG+KSI
Sbjct: 63 PTTFMNNSGLAVRALLTYYNI-STKDLMVIYDDLDMAVGKIRLRQKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G + + R++IGIGRP +I HVLG F + + + +D + +++ + +
Sbjct: 122 HIGTQEFDRVKIGIGRPSHGMSVINHVLGKFDTDDMITINIALDKVDKAINYYLQEKSIE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQQFN 188
>gi|269796294|ref|YP_003315749.1| peptidyl-tRNA hydrolase [Sanguibacter keddieii DSM 10542]
gi|269098479|gb|ACZ22915.1| peptidyl-tRNA hydrolase [Sanguibacter keddieii DSM 10542]
Length = 202
Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 109/196 (55%), Gaps = 9/196 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD-------G 53
+++V GLGNPG +Y NRHN+G M +D + S H + A ++E +L G
Sbjct: 8 LWLVVGLGNPGPQYAGNRHNVGQMVLDELASRHGGSFSAHRSRAAVAEVRLGVLPGGVPG 67
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
R +L KP T+MN SG + + ++++ ++ LV+HD+LD+ FG +R K GGG+ GHN
Sbjct: 68 PRVVLAKPSTYMNTSGGPVAGLAQYFQVEP-DHVLVVHDELDIPFGDVRCKIGGGEGGHN 126
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GL+ IS+ G K+Y R+R GIGRPP VL +F + ER L ++D A ++ ++
Sbjct: 127 GLRDISKALGTKDYLRVRTGIGRPPGRMDTADFVLKDFGTVERKELPFLLDTSADAVEMV 186
Query: 173 AKREDVSFLNHIVSVR 188
+ +
Sbjct: 187 VTEGLEKAQMAFHTKK 202
>gi|319777783|ref|YP_004137434.1| peptidyl-tRNA hydrolase [Mycoplasma fermentans M64]
gi|238810160|dbj|BAH69950.1| hypothetical protein [Mycoplasma fermentans PG18]
gi|318038858|gb|ADV35057.1| Peptidyl-tRNA hydrolase [Mycoplasma fermentans M64]
Length = 186
Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 106/190 (55%), Gaps = 7/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG++Y +HNIGF+ +D+I + K+KF+ ++ IL K
Sbjct: 1 MKLIVGLGNPGNQYRFTKHNIGFLTVDKICANFNLTLTKEKFNGFYAKT----EDFILAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+ + + +FYK+ + + L+IHD+ D + G +K GG AGHNG++SI
Sbjct: 57 PTTYMNNSGEFVQAIASFYKI-DPSDILIIHDEKDYEIGQAAIKVGGSSAGHNGVQSIIN 115
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+KRLRIGIGR P + +VL NF+S + + +++ A++ +
Sbjct: 116 ALRSNEFKRLRIGIGRDP-KMELKDYVLSNFTSDQMLVVEQVLNVAAQAAISFVYNDIKI 174
Query: 180 FLNHIVSVRK 189
+N+ RK
Sbjct: 175 VMNNFNVFRK 184
>gi|157376600|ref|YP_001475200.1| peptidyl-tRNA hydrolase [Shewanella sediminis HAW-EB3]
gi|189038166|sp|A8FYZ9|PTH_SHESH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157318974|gb|ABV38072.1| Aminoacyl-tRNA hydrolase [Shewanella sediminis HAW-EB3]
Length = 194
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y + RHN G + + K++ + L G L+
Sbjct: 5 KLIVGLANPGDKYAQTRHNAGAWYVQELARVCGATLVADSKYYGLTARVTLHGKDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + NF+++ E LV HD+LD+ G + K GGG GHNGLK I
Sbjct: 65 PSTFMNLSGKSVGALANFFRIEP-EEILVAHDELDMQPGVAKFKLGGGHGGHNGLKDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K N + RLRIGIG P D + +VLG + E+ + +ID RS LL +
Sbjct: 124 KLANNKGFYRLRIGIGHPGDKNQVSNYVLGKAPASEQTLIETVIDEAVRSTELLFNEDMA 183
Query: 179 SFLNHIVSVR 188
++ + S +
Sbjct: 184 KAMHRLHSFK 193
>gi|262039489|ref|ZP_06012791.1| aminoacyl-tRNA hydrolase [Leptotrichia goodfellowii F0264]
gi|261746470|gb|EEY34007.1| aminoacyl-tRNA hydrolase [Leptotrichia goodfellowii F0264]
Length = 188
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 64/188 (34%), Positives = 102/188 (54%), Gaps = 3/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHNIGF+ ID + ++K+ +E + G + K
Sbjct: 1 MKLIVGLGNPGEQYKLTRHNIGFIFIDEYLKENNINDMREKYKSEFIQTAYKGDKVFYQK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ E + F+K+ VI+DD+D++FG +++K G AGHNG+KSI +
Sbjct: 61 PLTFMNSSGEAVGEAVRFFKIDPETELFVIYDDMDMEFGKVKVKKDGRSAGHNGIKSIIQ 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED--V 178
G+ + R++ GIG+P I VLG FS E+ L + I + + K +
Sbjct: 121 HVGEKFVRIKYGIGKPKSKDETIGFVLGKFSPEEKETLKESREKIFSLIDDI-KNDMTLE 179
Query: 179 SFLNHIVS 186
+N +
Sbjct: 180 RLMNKYNT 187
>gi|319746178|gb|EFV98448.1| aminoacyl-tRNA hydrolase [Streptococcus agalactiae ATCC 13813]
Length = 195
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 106/190 (55%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HNIGFM +DRI + K F AEI ++G + IK
Sbjct: 7 KMIVGLGNPGSKYNDTKHNIGFMAVDRIVKKLDVNFTEDKNFKAEIGSDFINGEKIYFIK 66
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + ++++ ++I+DDLD++ G +R + G GHNG+KSI
Sbjct: 67 PTTFMNNSGIAVKALLTYYNI-SIKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIA 125
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + + R+++GIGRP +I HVLG F + + +D + ++ L +
Sbjct: 126 HLGTQEFDRIKVGIGRPNGRMTVINHVLGKFDKNDEIMISNTLDKVDNAVNYYLQTNDFQ 185
Query: 179 SFLNHIVSVR 188
+ ++
Sbjct: 186 KTMQKYNGLK 195
>gi|255065625|ref|ZP_05317480.1| aminoacyl-tRNA hydrolase [Neisseria sicca ATCC 29256]
gi|255049943|gb|EET45407.1| aminoacyl-tRNA hydrolase [Neisseria sicca ATCC 29256]
Length = 192
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D + +KKF E++ L G L+K
Sbjct: 6 KMIVGLGNPGGEYEQTRHNAGFWFLDELAWQWKVSFKEEKKFFGEVARANLPGGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQS+ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PMTFMNRSGQSVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G NY RLR+GI P D ++ +VL S+ R + I +++P + E
Sbjct: 125 RLGTPNYYRLRLGIDHPGDRNLVVAYVLNKPSAEHRQQIDEAIAKSLKAIPKIMAGEWEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 VTRFLHS 191
>gi|186475082|ref|YP_001856552.1| peptidyl-tRNA hydrolase [Burkholderia phymatum STM815]
gi|238689439|sp|B2JCN7|PTH_BURP8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|184191541|gb|ACC69506.1| Aminoacyl-tRNA hydrolase [Burkholderia phymatum STM815]
Length = 200
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLIDQLAREAGTTLRDERRFHGFYAKARLYGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQS++ + +F+K+ + LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 63 PMTYMNRSGQSVVALAHFFKILP-DQILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 121
Query: 121 KCG-KNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSTQQYWRLRIGIGHPRDLIPDSARAGAKPDVANFVLKPPRKEEQDLIDASIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P++ K E + +
Sbjct: 182 PVVVKGELERAMMQLH 197
>gi|94309232|ref|YP_582442.1| peptidyl-tRNA hydrolase [Cupriavidus metallidurans CH34]
gi|119390987|sp|Q1LRQ3|PTH_RALME RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|93353084|gb|ABF07173.1| peptidyl-tRNA hydrolase [Cupriavidus metallidurans CH34]
Length = 198
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ + +FH +L L+K
Sbjct: 3 KLIVGLGNPGAEYEATRHNAGFWLVDQLARMGGTTLRVESRFHGLAGRARLWDQDVWLLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG S++ + FYK+ E +V HD++DL G+ +LK GGG GHNGLK IS
Sbjct: 63 PSTFMNRSGLSVVSLARFYKILPDE-IVVAHDEMDLPAGSAKLKRGGGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP--------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
++Y RLRIG+G P ++ VL E+ + ID L
Sbjct: 122 HLTTQDYWRLRIGVGHPRNAPGGAAGGREDVVNFVLKPPRKEEQQAIDEAIDRCIGPLGT 181
Query: 172 LAKREDVSFLNHIVSVR 188
LA+ E + + + R
Sbjct: 182 LARGESERAMMELHTGR 198
>gi|241758707|ref|ZP_04756820.1| aminoacyl-tRNA hydrolase [Neisseria flavescens SK114]
gi|261380186|ref|ZP_05984759.1| aminoacyl-tRNA hydrolase [Neisseria subflava NJ9703]
gi|241320915|gb|EER57128.1| aminoacyl-tRNA hydrolase [Neisseria flavescens SK114]
gi|284797033|gb|EFC52380.1| aminoacyl-tRNA hydrolase [Neisseria subflava NJ9703]
Length = 192
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN+GF +D + + +KKF+ E++ L+K
Sbjct: 6 KLIVGLGNPGQEYEQTRHNVGFWLLDELAWKWKVNFKDEKKFYGEVARATTPDGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PMTFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G N+ RLR+GI P D ++ +VL S+ R + I + LP + E
Sbjct: 125 RLGTPNFYRLRLGIDHPGDRNLVVGYVLNKPSAEHRQQIDDSIAKSLQGLPAVLNGEWEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 ATRFLHS 191
>gi|300705253|ref|YP_003746856.1| peptidyl-tRNA hydrolase [Ralstonia solanacearum CFBP2957]
gi|299072917|emb|CBJ44273.1| peptidyl-tRNA hydrolase [Ralstonia solanacearum CFBP2957]
Length = 200
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ H + + H + L G L++
Sbjct: 3 KLIVGLGNPGAEYAATRHNAGFWLVDQLARMGHVTLRNETRVHGYAARATLWGHDVWLLQ 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG + + + FYK+ E LV HD+LDL G ++LK GGG GHNGLK I+
Sbjct: 63 PQTFMNRSGLATVALARFYKILPDE-ILVAHDELDLPPGAVKLKLGGGSGGHNGLKDIAA 121
Query: 121 KC-GKNYKRLRIGIGR----------PPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ + RLR+GIG P + VL E+ + ID +L
Sbjct: 122 HLTTQQFWRLRLGIGHPRNLLPPGTAPSGQHDVANFVLKAPRREEQELIDRAIDRSLDAL 181
Query: 170 PLLAKREDVSFLNHIVS 186
P L + + +
Sbjct: 182 PDLVTGNTERAMMRLHT 198
>gi|88861338|ref|ZP_01135968.1| peptidyl-tRNA hydrolase [Pseudoalteromonas tunicata D2]
gi|88816604|gb|EAR26429.1| peptidyl-tRNA hydrolase [Pseudoalteromonas tunicata D2]
Length = 189
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 101/189 (53%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G I+ + + + K+H + + +L+ P
Sbjct: 1 MLVGLANPGPEYSKTRHNAGAWFIEELAARYNCILKHDPKYHGLTGKIFIQDQEFLLLIP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ + NF+K+P +EN LV HD++DL G + K GGG GHNGLK I K
Sbjct: 61 TTYMNLSGKSVSALANFFKIP-VENILVAHDEMDLPTGVAKFKRGGGHGGHNGLKDIIAK 119
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K + RLR+GIG P + VLG S E+ + +D R + +LAK +
Sbjct: 120 MANNKEFLRLRVGIGHPGHREMVTGWVLGKASKAEQEQMDAAVDEAVRCMEILAKDGVLK 179
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 180 AQNRLHSFK 188
>gi|57237363|ref|YP_178376.1| peptidyl-tRNA hydrolase [Campylobacter jejuni RM1221]
gi|86151320|ref|ZP_01069535.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 260.94]
gi|68052878|sp|Q5HWF9|PTH_CAMJR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|57166167|gb|AAW34946.1| peptidyl-tRNA hydrolase [Campylobacter jejuni RM1221]
gi|85841667|gb|EAQ58914.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 260.94]
gi|315057733|gb|ADT72062.1| Peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni S3]
Length = 181
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 77/189 (40%), Positives = 111/189 (58%), Gaps = 10/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M +V GLGN G EY RHN+GFM ID + F KF E+ + G +L+
Sbjct: 1 MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFKGELFKI---GSSLLLL 57
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG S+ V +FYK E +VIHDD+D++ G LR K GG GHNGLKSI
Sbjct: 58 KPSTYMNNSGLSVKAVNDFYKC---ERMIVIHDDIDINLGALRFKKGGSSGGHNGLKSID 114
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG +Y+R+RIG+G+ ++I HVLG F E L ++++ ++L L + +D+S
Sbjct: 115 TLCGNDYERVRIGVGK---GENVISHVLGKFKPEEEITLSKVLEHTKKALLELIENDDLS 171
Query: 180 FLNHIVSVR 188
++ S++
Sbjct: 172 AISSKYSLK 180
>gi|76787164|ref|YP_328734.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae A909]
gi|77405628|ref|ZP_00782717.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae H36B]
gi|119391017|sp|Q3K419|PTH_STRA1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|76562221|gb|ABA44805.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae A909]
gi|77175772|gb|EAO78552.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae H36B]
Length = 191
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HNIGFM IDRI + K F AEI ++G + IK
Sbjct: 3 KMIVGLGNPGSKYNDTKHNIGFMAIDRIVKNLDVNFTEDKNFKAEIGSDFINGEKIYFIK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + ++++ ++I+DDLD++ G +R + G GHNG+KSI
Sbjct: 63 PTTFMNNSGIAVKALLTYYNI-SIKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + + R+++GIGRP +I HVLG F + + +D + ++ L +
Sbjct: 122 HLGTQEFDRIKVGIGRPNGRMTVINHVLGKFDKNDEIMISNTLDKVDNAVKYYLQTNDFQ 181
Query: 179 SFLNHIVSVR 188
+ ++
Sbjct: 182 KTMQKYNGLK 191
>gi|325524745|gb|EGD02727.1| peptidyl-tRNA hydrolase [Burkholderia sp. TJI49]
Length = 199
Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLIDQLAREAGATLRDERRFHGFYAKARLHGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ + +F+K+ + LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 63 PQTYMNRSGQSVVALAHFFKIMP-DQILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRREEQEVIDAAIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P++ K E +
Sbjct: 182 PMVVKGELDRATMQLH 197
>gi|283955737|ref|ZP_06373228.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 1336]
gi|283792692|gb|EFC31470.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 1336]
Length = 181
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 77/189 (40%), Positives = 112/189 (59%), Gaps = 10/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M +V GLGN G EY RHN+GFM ID + F KF E+ + G +L+
Sbjct: 1 MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFKGELFKI---GSSLLLL 57
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG S+ V +FYK E +VIHDD+D++ G+LR K GG GHNGLKSI
Sbjct: 58 KPSTYMNNSGLSVKAVNDFYKC---ERMIVIHDDIDINLGSLRFKKGGSSGGHNGLKSID 114
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG +Y+R+RIG+G+ ++I HVLG F E L ++++ ++L L + +D+S
Sbjct: 115 TLCGNDYERVRIGVGK---GENVISHVLGKFKPEEEITLSKVLEHTKKALLELIENDDLS 171
Query: 180 FLNHIVSVR 188
++ S++
Sbjct: 172 AISSKYSLK 180
>gi|73540046|ref|YP_294566.1| peptidyl-tRNA hydrolase [Ralstonia eutropha JMP134]
gi|119390986|sp|Q476G1|PTH_RALEJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|72117459|gb|AAZ59722.1| peptidyl-tRNA hydrolase [Ralstonia eutropha JMP134]
Length = 199
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 64/196 (32%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ + +FH +L L+K
Sbjct: 3 KLIVGLGNPGAEYEATRHNAGFWLVDQLARMGGTTLRVEGRFHGLAGRARLWDQDIWLLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG +++ + FYK+ E +V HD++DL G +LK GGG GHNGLK I+
Sbjct: 63 PSTFMNRSGLAVVSLARFYKILPDE-IVVAHDEMDLPPGAAKLKRGGGAGGHNGLKDIAA 121
Query: 121 KC-GKNYKRLRIGIGRP--------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
+ + RLR+G+G P ++ VL E+ + ID L L
Sbjct: 122 HLTTQEFWRLRLGVGHPRNLPGGAGAGREDVVNFVLKPPRKEEQQAIDEAIDRSIDPLGL 181
Query: 172 LAKREDVSFLNHIVSV 187
LA+ + + + +V
Sbjct: 182 LARGDAERAMAQLHTV 197
>gi|33152133|ref|NP_873486.1| peptidyl-tRNA hydrolase [Haemophilus ducreyi 35000HP]
gi|33148355|gb|AAP95875.1| peptidyl-tRNA hydrolase [Haemophilus ducreyi 35000HP]
Length = 200
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y RHN G ++ + + + K+ + ++ L+
Sbjct: 11 KLIVGLANPGAKYEGTRHNAGEWLVNELARMYNTSLKDEAKYFGKTAKINTVNGDVWLLI 70
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +F+++ E L+ HD+LDL G +LK GGG GHNGLK I
Sbjct: 71 PTTFMNLSGKAVGALAHFFRIK-AEEILIAHDELDLPPGVAKLKQGGGHGGHNGLKDIIS 129
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N + R+R+GIG P + +VL + ++ + +ID +R L +L K
Sbjct: 130 ALGNNNNFYRIRLGIGHPGHKDQVAGYVLSKPAPQDQQKINAVIDEASRCLEILFKDGVT 189
Query: 179 SFLNHIVSVR 188
S N + S +
Sbjct: 190 SATNRLNSFK 199
>gi|26987456|ref|NP_742881.1| peptidyl-tRNA hydrolase [Pseudomonas putida KT2440]
gi|148546000|ref|YP_001266102.1| peptidyl-tRNA hydrolase [Pseudomonas putida F1]
gi|37999417|sp|Q88PX8|PTH_PSEPK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229439|sp|A5VYF8|PTH_PSEP1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|24982119|gb|AAN66345.1|AE016263_2 peptidyl-tRNA hydrolase [Pseudomonas putida KT2440]
gi|148510058|gb|ABQ76918.1| peptidyl-tRNA hydrolase [Pseudomonas putida F1]
gi|313497086|gb|ADR58452.1| Pth [Pseudomonas putida BIRD-1]
Length = 194
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++R+ S KK+ ++ G L+ P
Sbjct: 6 LIVGLGNPGPEYEQTRHNAGALFVERLASAQRVSLTADKKYFGLTAKFSHQGNDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + NF+++ E LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALANFFRIKP-EAILVAHDELDLPPGVAKLKRGGGHGGHNGLRDIIAQ 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ RLR+GIG P D + VLG E+ L ID LP + +
Sbjct: 125 LGNQNDFHRLRLGIGHPGDAKLVSNFVLGRAPRAEQEKLDASIDFALGVLPDVLAGDFAK 184
Query: 180 FLNHIVSVR 188
+ + S +
Sbjct: 185 AMRELHSQK 193
>gi|292493879|ref|YP_003529318.1| peptidyl-tRNA hydrolase [Nitrosococcus halophilus Nc4]
gi|291582474|gb|ADE16931.1| peptidyl-tRNA hydrolase [Nitrosococcus halophilus Nc4]
Length = 196
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+++ GLGNPG +Y + RHN+GF ID KF + + G +L+K
Sbjct: 9 WLLVGLGNPGAKYAQTRHNVGFWWIDTFAKGLDTDFKPAAKFFGDFARVSWCGQNLLLLK 68
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++L ++N+Y+LP LE+ L+IHDDLDL G +LK GG GHNGL+ I
Sbjct: 69 PTTFMNRSGQAVLALLNYYQLP-LEHLLIIHDDLDLPPGGAKLKRNGGHGGHNGLRDIIN 127
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+ ++ RLR+GIG P ++ +VL S+ ++ + I LP + +
Sbjct: 128 CLGRRDFLRLRLGIGHPGSGQDVVNYVLNRPSAADQRAIEAAITGALEVLPEVLADDIEK 187
Query: 180 FLNHIVS 186
++ + S
Sbjct: 188 AMHRLHS 194
>gi|319638396|ref|ZP_07993158.1| peptidyl-tRNA hydrolase [Neisseria mucosa C102]
gi|317400145|gb|EFV80804.1| peptidyl-tRNA hydrolase [Neisseria mucosa C102]
Length = 192
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 102/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN+GF +D + + +KKF+ E++ L+K
Sbjct: 6 KLIVGLGNPGQEYEQTRHNVGFWLLDELAWKWKVNFKDEKKFYGEVARAATPDGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PMTFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G N+ RLR+GI P D ++ +VL S+ R + I + LP++ E
Sbjct: 125 RLGTPNFYRLRLGIDHPGDRNLVVGYVLNKPSAEHRQQIDDAIAKSLQGLPVVLNGEWEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 ATRFLHS 191
>gi|313889528|ref|ZP_07823174.1| aminoacyl-tRNA hydrolase [Streptococcus pseudoporcinus SPIN 20026]
gi|313122140|gb|EFR45233.1| aminoacyl-tRNA hydrolase [Streptococcus pseudoporcinus SPIN 20026]
Length = 189
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 58/187 (31%), Positives = 99/187 (52%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y +HN+GFM +D++ + K F A I ++ + +K
Sbjct: 3 KMIVGLGNPGSKYDNTKHNVGFMAVDQLAKNFDVSFTEDKNFKALIGWAFINQEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + + + +VI+DDLD++ G LR + G GHNG+KSI
Sbjct: 63 PTTFMNNSGIAVRALLTYYNIA-ISDLIVIYDDLDMEVGKLRFRQKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL-LAKREDV 178
G + + R++IGIGRP +I HVLG F + + ++ + ++ L +
Sbjct: 122 NIGSQEFDRVKIGIGRPHSGMTVINHVLGKFEKEDGIRIALTLEKVVMAVNFYLQEGNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 LTMQKFN 188
>gi|261880167|ref|ZP_06006594.1| aminoacyl-tRNA hydrolase [Prevotella bergensis DSM 17361]
gi|270333138|gb|EFA43924.1| aminoacyl-tRNA hydrolase [Prevotella bergensis DSM 17361]
Length = 194
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 67/188 (35%), Positives = 94/188 (50%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG EY RHN GFM +D ++ K + ++ + G + IL+KP
Sbjct: 4 FLICGLGNPGDEYAGTRHNTGFMILDAFAKASNI-CFEDKRYGFVANTSIKGRKVILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N K+ LVI DD+ L G RLK GG + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNEEKIDQ-SRLLVISDDVALPLGEFRLKAGGSNGGHNGLGHIIQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G NY RLR+G+G + VLG +S E L P D + + + +
Sbjct: 122 IGDNYARLRVGVGNDYPRGGQVDWVLGRYSEDEMKVLQPTFDLSIEMIKSFVLQGINNTM 181
Query: 182 NHIVSVRK 189
N + K
Sbjct: 182 NQYNRLGK 189
>gi|254671940|emb|CBA04310.1| Peptidyl-tRNA hydrolase [Neisseria meningitidis alpha275]
Length = 192
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D + +KKF E++ L L+K
Sbjct: 6 KMLVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARAALPDGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PTTFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K G +Y RLR+GI P D ++ +VL S+ R + + +++P + +
Sbjct: 125 KLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSTEHRRQIDDAVAKSLQAIPDILAGKWEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 ATRFLHS 191
>gi|33864102|ref|NP_895662.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9313]
gi|46576737|sp|Q7V4V4|PTH_PROMM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|33635686|emb|CAE22010.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9313]
Length = 206
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 8/193 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHNIGFM +D++ + + KFH ++E + R L+ P
Sbjct: 8 LLVGLGNPGSKYVGTRHNIGFMALDKLAAQKSVSFRPQTKFHGLMAEVAVGSERVRLLMP 67
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+++ ++++ L ++ LV+ DD+DL G LRL+ G GHNGL+S +
Sbjct: 68 QTYMNESGRAIRAAIDWFGL-EVDQLLVLVDDMDLSLGRLRLRAQGSAGGHNGLRSAIQH 126
Query: 122 CG-KNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G +++ RLRIGIG P A + HVLG FS E + ++D + L L+
Sbjct: 127 LGTQDFCRLRIGIGAPGCTSEERRARTVSHVLGVFSRQESLLVDQVLDEVLMGLDLIQCL 186
Query: 176 EDVSFLNHIVSVR 188
N + + +
Sbjct: 187 GLERAGNRLNAFQ 199
>gi|83588952|ref|YP_428961.1| peptidyl-tRNA hydrolase [Moorella thermoacetica ATCC 39073]
gi|119390960|sp|Q2RMC1|PTH_MOOTA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|83571866|gb|ABC18418.1| peptidyl-tRNA hydrolase [Moorella thermoacetica ATCC 39073]
Length = 190
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 71/186 (38%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG Y RHN GFM +D + + + A +G + R +L+KP
Sbjct: 5 LMVVGLGNPGPRYATTRHNAGFMVVDLLADDLGITLDRTREQALTGQGLVGNNRVLLVKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SGQ++ + +Y + E LVIHDDLDL G LRL+ GG GH GL+SI
Sbjct: 65 QTYMNNSGQAVAPLARWYGIAP-EAILVIHDDLDLAPGRLRLRRGGSSGGHRGLQSIITH 123
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DVS 179
G RL+IGIGRPP ++I +VL FS + + P++ AR+ L +
Sbjct: 124 LGTTAVPRLKIGIGRPPLGQNVIDYVLKPFSEGDWELIRPVLLEAARAARFLLEGGSMDE 183
Query: 180 FLNHIV 185
+N
Sbjct: 184 AMNRFN 189
>gi|207727834|ref|YP_002256228.1| peptidyl-trna hydrolase (pth) protein [Ralstonia solanacearum
MolK2]
gi|206591075|emb|CAQ56687.1| peptidyl-trna hydrolase (pth) protein [Ralstonia solanacearum
MolK2]
Length = 200
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 67/198 (33%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ H + +FH + L G L++
Sbjct: 3 KLIVGLGNPGAEYAATRHNAGFWLVDQLARMGHVTLRNETRFHGYAARATLWGHDVWLLQ 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG + + + FYK+ E LV HD+LDL G ++LK GGG GHNGLK I
Sbjct: 63 PQTFMNRSGLATVALARFYKILPDE-ILVAHDELDLPPGAVKLKLGGGSGGHNGLKDIGA 121
Query: 121 KC-GKNYKRLRIGIGR----------PPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ + RLR+GIG P + VL E+ + ID +L
Sbjct: 122 HLTTQQFWRLRLGIGHPRNLLPPGTAPSGQHDVANFVLKAPRREEQELIDRAIDRSLNAL 181
Query: 170 PLLAKREDVSFLNHIVSV 187
P L + + +
Sbjct: 182 PDLVAGNTERAMMRLHTA 199
>gi|53718159|ref|YP_107145.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei K96243]
gi|167737030|ref|ZP_02409804.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 14]
gi|167814139|ref|ZP_02445819.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 91]
gi|254187801|ref|ZP_04894313.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei Pasteur 52237]
gi|254296081|ref|ZP_04963538.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 406e]
gi|68052913|sp|Q63XM0|PTH_BURPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|52208573|emb|CAH34509.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei K96243]
gi|157805711|gb|EDO82881.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei 406e]
gi|157935481|gb|EDO91151.1| peptidyl-tRNA hydrolase [Burkholderia pseudomallei Pasteur 52237]
Length = 201
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLFGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQ+++ + +F+K+ E LV HD+LDL G +LK GGG GHNGLK IS
Sbjct: 63 PQTYMNRSGQAVVALAHFFKILPTE-ILVAHDELDLPPGAAKLKLGGGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRKDEQDLINAAIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P K E + +
Sbjct: 182 PTAIKGETERAMMQLH 197
>gi|325962654|ref|YP_004240560.1| peptidyl-tRNA hydrolase [Arthrobacter phenanthrenivorans Sphe3]
gi|323468741|gb|ADX72426.1| peptidyl-tRNA hydrolase [Arthrobacter phenanthrenivorans Sphe3]
Length = 196
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 110/190 (57%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQ--LDGLRTILI 59
+++ GLGNPG +Y NRHN+G M +D + + K A++ EG+ + G R +L
Sbjct: 5 WLIVGLGNPGAQYQGNRHNVGQMVLDELAARMGAGFKSHKARAQVLEGRLGIGGPRVVLA 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN+SG + + NFY + + + + +HD++D+ F T++LK GGG+ GHNGL+ IS
Sbjct: 65 KPMTYMNVSGGPVAALANFYGI-SPDRVVAVHDEIDIPFNTVKLKLGGGEGGHNGLRDIS 123
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ K+Y R+R+G+GRPP +VL NF S E L ++D A ++ +L +
Sbjct: 124 KTLATKDYLRVRVGVGRPPGRMDTADYVLRNFGSAELKELPFLLDEAADAVEVLLQDGLT 183
Query: 179 SFLNHIVSVR 188
+ +
Sbjct: 184 AAQQKFHPAK 193
>gi|269214014|ref|ZP_06158301.1| aminoacyl-tRNA hydrolase [Neisseria cinerea ATCC 14685]
gi|269144805|gb|EEZ71223.1| aminoacyl-tRNA hydrolase [Neisseria cinerea ATCC 14685]
Length = 196
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG EY + RHN GF +D + +KKF E++ L L+K
Sbjct: 10 KMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARAALPDGDVWLLK 69
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 70 PTTFMNRSGQAVAALTQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 128
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G +Y RLR+GI P D ++ +VL S R + I +++P + +
Sbjct: 129 RLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSVEHRQQIDDAIAKSLQAIPDIISGKWEE 188
Query: 180 FLNHIVS 186
+ S
Sbjct: 189 ATRFLHS 195
>gi|145219565|ref|YP_001130274.1| peptidyl-tRNA hydrolase [Prosthecochloris vibrioformis DSM 265]
gi|189038158|sp|A4SE63|PTH_PROVI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145205729|gb|ABP36772.1| peptidyl-tRNA hydrolase [Chlorobium phaeovibrioides DSM 265]
Length = 190
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 101/189 (53%), Gaps = 7/189 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP Y RHNIGF ++ + + P K K +++ + G + +L+K
Sbjct: 1 MKLIIGLGNPEARYSNTRHNIGFEAVEALAAAFGAPFSKGKGKYLVAKIRHRGEQLMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG +++ MNF+K + LVI DD++L GTLRL++ G G NGLK I E
Sbjct: 61 PMTYMNLSGHAVVAAMNFHK-ALRSDILVICDDMNLPSGTLRLRSKGSAGGQNGLKHIIE 119
Query: 121 KCG-KNYKRLRIGIG---RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G + + RLRIGIG +P VLG FS+ ER + ++ ++ A
Sbjct: 120 SLGSEEFARLRIGIGLEEKPQGGY--SSFVLGKFSTDERNVMNRTLEVCTEAILDFAVNG 177
Query: 177 DVSFLNHIV 185
+NH
Sbjct: 178 ISHAMNHYN 186
>gi|77411304|ref|ZP_00787653.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae CJB111]
gi|77162640|gb|EAO73602.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae CJB111]
Length = 191
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 106/190 (55%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HNIGFM +DRI + K F AEI ++G + IK
Sbjct: 3 KMIVGLGNPGSKYNDTKHNIGFMAVDRIVKNLDVNFTEDKNFKAEIGSDFINGEKIYFIK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + ++++ ++I+DDLD++ G +R + G GHNG+KSI
Sbjct: 63 PTTFMNNSGIAVKALLTYYNI-SIKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + + R+++GIGRP +I HVLG F + + +D + ++ L +
Sbjct: 122 HLGTQEFDRIKVGIGRPNGRMTVINHVLGKFDKNDEIMISNTLDKVDNAVNYYLQTNDFQ 181
Query: 179 SFLNHIVSVR 188
+ ++
Sbjct: 182 KTMQKYNGLK 191
>gi|46579984|ref|YP_010792.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris str. Hildenborough]
gi|120602604|ref|YP_967004.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris DP4]
gi|68052972|sp|Q72BR1|PTH_DESVH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199329|sp|A1VDR1|PTH_DESVV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|46449400|gb|AAS96051.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris str. Hildenborough]
gi|120562833|gb|ABM28577.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris DP4]
gi|311234018|gb|ADP86872.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris RCH1]
Length = 201
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 106/196 (54%), Gaps = 11/196 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---------HSFHFFPAWKKKFHAEISEGQLDG 53
++ GLGNPG EY RHN GFM ID + KKK+ +
Sbjct: 6 LIIGLGNPGREYDRTRHNFGFMFIDALLEEAQRNPFARCEQLSGGKKKYDLWRCDIVEGQ 65
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
+L KPQTFMNLSG+++L + +FY++ +V HD+LDL G +R K GGG+AGHN
Sbjct: 66 APWLLAKPQTFMNLSGEAVLAIASFYRVKPAA-MVVAHDELDLPLGRMRFKMGGGNAGHN 124
Query: 114 GLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GLKSI++ G ++ RLR+GIG+PP VLG FS + + +++ + +
Sbjct: 125 GLKSITQCLGTPDFHRLRLGIGKPPAGGETTGWVLGRFSQSDTAMVDAVLEAAIQGIRTF 184
Query: 173 AKREDVSFLNHIVSVR 188
A DV+ +I + R
Sbjct: 185 ATEGDVAATQYINAFR 200
>gi|119390904|sp|Q4JU39|PTH1_CORJK RecName: Full=Peptidyl-tRNA hydrolase 1; Short=PTH 1
Length = 193
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 66/173 (38%), Positives = 101/173 (58%), Gaps = 5/173 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA---WKKKFHAEISEGQLDGLRTIL 58
+++ GLGNPG +Y RHN+G M I + A KK + +I+E ++ G + +L
Sbjct: 15 WLIVGLGNPGDKYANTRHNVGRMVIGELLDRQVPAASLNTHKKTNTDIAEVKIAGRKVVL 74
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+P+TFMN+SG + ++ F+K+P EN +V +DDL+ D G ++L+ GGD GHNGLKSI
Sbjct: 75 AQPRTFMNVSGGPVQQLAAFFKIP-AENIIVAYDDLEGDPGAVKLRQSGGDKGHNGLKSI 133
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
++ G K+Y RL GIGRPP +VL F E + + + A +
Sbjct: 134 TKSLGTKDYWRLSCGIGRPPGRMDPAAYVLKPFPKSEAAEVAIMCADAADEVE 186
>gi|315653945|ref|ZP_07906861.1| aminoacyl-tRNA hydrolase [Lactobacillus iners ATCC 55195]
gi|315488641|gb|EFU78287.1| aminoacyl-tRNA hydrolase [Lactobacillus iners ATCC 55195]
Length = 185
Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 102/187 (54%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM ID + K+KF + ++ G IL++
Sbjct: 1 MKLIVGLGNPGLKYQKTKHNTGFMAIDYYLKKNGLSFNKEKFEGFWIKTKIKGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++++F+K+ + + LVIHDD+D+ +RL+ G GHNG+KSI
Sbjct: 61 PQTYMNDSGKSVTQLVDFFKI-DAHDILVIHDDMDMPVAKIRLRKSGKSGGHNGIKSIIN 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ RL+IGI P ++ VL FSS + + +++ + + +
Sbjct: 120 CLNDSEFNRLKIGIDHPT-KETVVSWVLTPFSSDDYIKMEATFATVSQIIDDFIDNKSIE 178
Query: 180 F-LNHIV 185
F +N
Sbjct: 179 FLMNKYN 185
>gi|188997589|ref|YP_001931840.1| Aminoacyl-tRNA hydrolase [Sulfurihydrogenibium sp. YO3AOP1]
gi|259535276|sp|B2V6V4|PTH_SULSY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|188932656|gb|ACD67286.1| Aminoacyl-tRNA hydrolase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 189
Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 64/181 (35%), Positives = 98/181 (54%), Gaps = 5/181 (2%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIKPQ 62
+ GLGNPG +Y RHN+GFM D + +++K + I E I+ KPQ
Sbjct: 5 IIGLGNPGEKYKNTRHNVGFMVADLVAKSLNCDRKYREKAFSHIFEC--PDYDVIIAKPQ 62
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG ++L ++ YK+ E LV++DDLDL G +RL+ G GHNG+KSI
Sbjct: 63 TYMNLSGNAVLNILKDYKIKPSE-ILVVYDDLDLPLGAVRLRLKGSSGGHNGIKSIINTI 121
Query: 123 -GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
+ + RL+IGIGRP + +VL F+ E++ L ++ + + + K +
Sbjct: 122 KTEEFPRLKIGIGRPEKKEEVSDYVLSPFTKEEKFLLDKVLAHANECILNVLKYGIEKSM 181
Query: 182 N 182
N
Sbjct: 182 N 182
>gi|116075623|ref|ZP_01472882.1| peptidyl-tRNA hydrolase [Synechococcus sp. RS9916]
gi|116066938|gb|EAU72693.1| peptidyl-tRNA hydrolase [Synechococcus sp. RS9916]
Length = 206
Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 104/193 (53%), Gaps = 8/193 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN+GFM ++ + S K E++E + R L+ P
Sbjct: 8 LLVGLGNPGQRYAGTRHNVGFMALEALASGESARFKAMAKLQGELAEVGVGSNRLRLLMP 67
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+S+ ++++ L + + LV+ DD+DL G LRL+ G GHNGLKS +
Sbjct: 68 QTFMNESGRSIRAALDWFDL-SSDQVLVLVDDMDLPLGRLRLRAKGSAGGHNGLKSTIQH 126
Query: 122 CG-KNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G + + RLRIGIG P A + HVLG+F E+ L ++D + R + L+ ++
Sbjct: 127 LGTQEFARLRIGIGAPGRSAEERRARTVSHVLGSFHQAEQSLLKDVLDEVLRGVDLIQRQ 186
Query: 176 EDVSFLNHIVSVR 188
N + +
Sbjct: 187 GLERAGNRLNGLN 199
>gi|256852010|ref|ZP_05557397.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii 27-2-CHN]
gi|260661421|ref|ZP_05862334.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii 115-3-CHN]
gi|282933682|ref|ZP_06339040.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 208-1]
gi|297205118|ref|ZP_06922514.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii JV-V16]
gi|256615422|gb|EEU20612.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii 27-2-CHN]
gi|260547876|gb|EEX23853.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii 115-3-CHN]
gi|281302172|gb|EFA94416.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 208-1]
gi|297149696|gb|EFH29993.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii JV-V16]
Length = 185
Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y + +HN GFMC+D + + + KF ++ ++ G IL++
Sbjct: 1 MKLIAGLGNPGKKYDKTKHNTGFMCLDNYMAKNNLSLNQNKFEGLFTKEKIAGKDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ +V NF+K+ + + L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNESGRSIRQVANFFKI-DPSDILIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGI P +T ++ VL F++ ++ + L +D
Sbjct: 120 DLGTEKFNRLKIGIRHPENT-TVVSWVLTPFNNEQQKLMDAAFSTSEDILTDFISGKDAG 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNKYN 185
>gi|22536192|ref|NP_687043.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae 2603V/R]
gi|25010082|ref|NP_734477.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae NEM316]
gi|77414473|ref|ZP_00790623.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae 515]
gi|46576816|sp|Q8E2I1|PTH_STRA5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|46576817|sp|Q8E7Y8|PTH_STRA3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|22533009|gb|AAM98915.1|AE014191_7 peptidyl-tRNA hydrolase [Streptococcus agalactiae 2603V/R]
gi|23094433|emb|CAD45652.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159483|gb|EAO70644.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae 515]
Length = 191
Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 107/190 (56%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HNIGFM +DRI + K F AEI ++G + IK
Sbjct: 3 KMIVGLGNPGSKYNDTKHNIGFMAVDRIVKDLDVNFTEDKNFKAEIGSDFINGEKIYFIK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + ++++ ++I+DDLD++ G +R + G GHNG+KSI
Sbjct: 63 PTTFMNNSGIAVKALLTYYNI-SIKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDV 178
G + + R+++GIGRP +I HVLG F + +L +D + ++ L +
Sbjct: 122 HLGTQEFDRIKVGIGRPNGRMTVINHVLGKFDKNDEIMILNTLDKVDNAVNYYLQTNDFQ 181
Query: 179 SFLNHIVSVR 188
+ ++
Sbjct: 182 KTMQKYNGLK 191
>gi|299068048|emb|CBJ39262.1| peptidyl-tRNA hydrolase [Ralstonia solanacearum CMR15]
Length = 200
Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ H + +FH + L L++
Sbjct: 3 KLIVGLGNPGAEYAATRHNAGFWLVDQLARMGHVTLRNETRFHGYAARATLWSHEVWLLQ 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG + + + FYK+ E LV+HD+LDL G ++LK GGG GHNGLK I+
Sbjct: 63 PQTFMNRSGLATVALARFYKILPDE-ILVVHDELDLLPGAVKLKLGGGSGGHNGLKDIAA 121
Query: 121 KC-GKNYKRLRIGIGR----------PPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ + RLR+GIG P + VL E+ + ID +L
Sbjct: 122 HLTTQQFWRLRLGIGHPRNLLPPGTAPSGQHDVANFVLKAPRREEQELIDRAIDRSLDAL 181
Query: 170 PLLAKREDVSFLNHIVS 186
P L + + +
Sbjct: 182 PDLVAGNAERAMMRLHT 198
>gi|87306412|ref|ZP_01088559.1| peptidyl-tRNA hydrolase [Blastopirellula marina DSM 3645]
gi|87290591|gb|EAQ82478.1| peptidyl-tRNA hydrolase [Blastopirellula marina DSM 3645]
Length = 184
Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y + RHN+GF +DR + + KF+ I E + +TIL+
Sbjct: 1 MKLVVGLGNPGPKYDKTRHNVGFEALDRFAAGSGVTP-RAKFNGNILELGVGEEKTILLY 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG S+ ++F+KLP+ E+ LV+ DD +L GTLR ++GG G GL I
Sbjct: 60 PHTFMNNSGTSVRAALDFFKLPS-ESVLVVCDDFNLPVGTLRFRSGGSAGGQKGLADILR 118
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K G + RLRIGIG P + + VLG F+ ER + +D R + +
Sbjct: 119 KVGTNDVPRLRIGIGPLPQSRDVTSFVLGKFAPQERAEIDFTLDRAIRGVADWIAHDLKY 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 CMNQYN 184
>gi|124024149|ref|YP_001018456.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9303]
gi|166229434|sp|A2CCI1|PTH_PROM3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|123964435|gb|ABM79191.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9303]
Length = 206
Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 67/193 (34%), Positives = 105/193 (54%), Gaps = 8/193 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHNIGFM +D++ + KFH ++E + R L+ P
Sbjct: 8 LLVGLGNPGSKYVGTRHNIGFMALDKLAGQKSVSFRPQTKFHGLMAEVGVGSERVRLLMP 67
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+++ ++++ L ++ LV+ DD+DL G LRL+ G GHNGL+S +
Sbjct: 68 QTYMNESGRAIRAAIDWFGL-EVDQLLVLVDDMDLPLGRLRLRAQGSAGGHNGLRSAIQH 126
Query: 122 CG-KNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G +++ RLRIGIG P A + HVLG FS E + ++D + L L+
Sbjct: 127 LGTQDFCRLRIGIGAPGCTSEERRARTVSHVLGVFSRQESLLVDQVLDEVLIGLDLIQCL 186
Query: 176 EDVSFLNHIVSVR 188
N + + +
Sbjct: 187 GLERAGNRLNAFQ 199
>gi|312865734|ref|ZP_07725956.1| aminoacyl-tRNA hydrolase [Streptococcus downei F0415]
gi|311098609|gb|EFQ56831.1| aminoacyl-tRNA hydrolase [Streptococcus downei F0415]
Length = 189
Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HNIGFM ID I + K F A + L+G + +K
Sbjct: 3 KLIVGLGNPGVKYDKTKHNIGFMTIDEITKNLDVTFTEDKNFKALVGSTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQS+ ++ ++ + E+ LVI+DDLD+ G +R + G GHNG+KSI +
Sbjct: 63 PLTFMNESGQSVQALLTYFNIAT-EDLLVIYDDLDMAVGKIRFRQKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA-KREDV 178
G + + R+++GIGRP ++ HVL F + +L ++ +A ++ +
Sbjct: 122 HIGNQEFDRIKVGIGRPKPGTTVVHHVLSTFGQDDYTTILASLERVAAAVHFYLDTGDFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QTMRKYN 188
>gi|54309999|ref|YP_131019.1| peptidyl-tRNA hydrolase [Photobacterium profundum SS9]
gi|68052961|sp|Q6LNA9|PTH_PHOPR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|46914438|emb|CAG21217.1| putative peptidyl-tRNA hydrolase [Photobacterium profundum SS9]
Length = 196
Score = 217 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 63/189 (33%), Positives = 93/189 (49%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G + + H + K+ +G L+ P
Sbjct: 7 LLVGLANPGAEYAKTRHNAGAWVVQELARVHNVSLREESKYFGVTGRITTNGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ + NF+++ E L+ HD+LDL G + K GGG GHNGL+ K
Sbjct: 67 TTYMNLSGKSVAALANFFQIKP-EEILIAHDELDLPPGVAKFKKGGGHGGHNGLRDTISK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + RLR+GIG P D + VLG E+ + +D R + +L K
Sbjct: 126 MGNNKEFYRLRVGIGHPGDKNKVANFVLGKAPVKEQECIDAAVDEAVRCMDILLKDGLNK 185
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 186 AQNRLHSFK 194
>gi|309803786|ref|ZP_07697872.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LactinV 11V1-d]
gi|312872596|ref|ZP_07732664.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LEAF 2062A-h1]
gi|325913116|ref|ZP_08175486.1| aminoacyl-tRNA hydrolase [Lactobacillus iners UPII 60-B]
gi|308164195|gb|EFO66456.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LactinV 11V1-d]
gi|311091958|gb|EFQ50334.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LEAF 2062A-h1]
gi|325477537|gb|EGC80679.1| aminoacyl-tRNA hydrolase [Lactobacillus iners UPII 60-B]
Length = 185
Score = 217 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 102/187 (54%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM ID + K+KF + ++ G IL++
Sbjct: 1 MKLIVGLGNPGLKYQKTKHNTGFMAIDYYLKKNGLSFNKEKFEGFWIKTKIKGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++++F+K+ + + LVIHDD+D+ +RL+ G GHNG+KSI
Sbjct: 61 PQTYMNDSGKSVTQLVDFFKI-DAHDILVIHDDMDMPVAKIRLRKSGKSGGHNGIKSIIH 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ RL+IGI P ++ VL FSS + + +++ + + +
Sbjct: 120 CLNDSEFNRLKIGIDHPT-KETVVSWVLTPFSSDDCTKMAATFATVSQIIDDFIDNKSIE 178
Query: 180 F-LNHIV 185
F +N
Sbjct: 179 FLMNKYN 185
>gi|29349996|ref|NP_813499.1| peptidyl-tRNA hydrolase [Bacteroides thetaiotaomicron VPI-5482]
gi|253572759|ref|ZP_04850159.1| peptidyl-tRNA hydrolase [Bacteroides sp. 1_1_6]
gi|46576804|sp|Q89YZ2|PTH_BACTN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|29341907|gb|AAO79693.1| peptidyl-tRNA hydrolase [Bacteroides thetaiotaomicron VPI-5482]
gi|251837659|gb|EES65750.1| peptidyl-tRNA hydrolase [Bacteroides sp. 1_1_6]
Length = 189
Score = 217 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 100/185 (54%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 4 YLIVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFIDGRYGFTTSFSIKGRQLILLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 64 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAI 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG I +VLG+F+ +R + ++ +
Sbjct: 123 LGTQNYARLRFGIGNDFPKGGQIDYVLGHFTDEDRKTMDERLETAGEIIKSFCLAGIDIT 182
Query: 181 LNHIV 185
+N
Sbjct: 183 MNQFN 187
>gi|254251378|ref|ZP_04944696.1| Peptidyl-tRNA hydrolase [Burkholderia dolosa AUO158]
gi|124893987|gb|EAY67867.1| Peptidyl-tRNA hydrolase [Burkholderia dolosa AUO158]
Length = 199
Score = 217 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF ID++ +++FH ++ ++ G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLIDQLAREAGATLRDERRFHGFYAKARVHGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ + +F+K+ + LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 63 PQTYMNRSGQSVVALAHFFKILP-DQILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRREEQDVIDASIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P++ K E +
Sbjct: 182 PMIVKGELDRATMQLH 197
>gi|251781474|ref|YP_002995775.1| peptidyl-tRNA hydrolase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390102|dbj|BAH80561.1| peptidyl-tRNA hydrolase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 189
Score = 217 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 107/187 (57%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HNIGFM +D++ + + K F A+I ++ + +K
Sbjct: 3 KMIVGLGNPGSKYEKTKHNIGFMAVDKLVNKLDVTFTEDKNFKAQIGSAFINHEKIYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + +E+ +VI+DDLD++ G LRL+ G GHNG+KSI
Sbjct: 63 PTTFMNNSGVAVKALLTYYNIA-IEDLIVIYDDLDMEVGKLRLRAKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL-LAKREDV 178
G + + R+++GIGRP +I HV+G+FS+ + + +D + ++ L +
Sbjct: 122 HLGTQEFDRIKVGIGRPLKGMTVINHVMGHFSTEDNIAIALTLDKVVNAVNFYLQENNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQKFN 188
>gi|86153854|ref|ZP_01072057.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|121613036|ref|YP_001000022.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 81-176]
gi|148927013|ref|ZP_01810689.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni CG8486]
gi|167004980|ref|ZP_02270738.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 81-176]
gi|205356038|ref|ZP_03222806.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni CG8421]
gi|166199322|sp|A1VY31|PTH_CAMJJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|85842815|gb|EAQ60027.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87250186|gb|EAQ73144.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 81-176]
gi|145844421|gb|EDK21530.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni CG8486]
gi|205346162|gb|EDZ32797.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni CG8421]
gi|307747249|gb|ADN90519.1| Peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni M1]
Length = 181
Score = 217 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 78/189 (41%), Positives = 112/189 (59%), Gaps = 10/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M +V GLGN G EY RHN+GFM ID + F KF E+ + G +L+
Sbjct: 1 MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFKGELFKI---GSSLLLL 57
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG S+ V +FYK E +VIHDD+D++ G LR K GG GHNGLKSI
Sbjct: 58 KPSTYMNNSGLSVKAVNDFYKC---ERMIVIHDDIDINLGALRFKKGGSSGGHNGLKSID 114
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG +Y+R+RIG+G+ ++I HVLG F S E L ++++ ++L L + +D+S
Sbjct: 115 TLCGNDYERVRIGVGK---GENVISHVLGKFKSEEEITLSKVLEHTKKALLELIENDDLS 171
Query: 180 FLNHIVSVR 188
++ S++
Sbjct: 172 AISSKYSLK 180
>gi|161869739|ref|YP_001598906.1| peptidyl-tRNA hydrolase [Neisseria meningitidis 053442]
gi|189038157|sp|A9M3M7|PTH_NEIM0 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|161595292|gb|ABX72952.1| peptidyl-tRNA hydrolase [Neisseria meningitidis 053442]
Length = 192
Score = 217 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG EY + RHN GF +D + +KKF E++ L L+K
Sbjct: 6 KMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARAALPDGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PATFMNRSGQAIAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K G +Y RLR+GI P D ++ +VL S+ R + + +++P + +
Sbjct: 125 KLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSTEHRRQIDDAVAKSLQAIPDILAGKWEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 ATRFLHS 191
>gi|110833377|ref|YP_692236.1| peptidyl-tRNA hydrolase [Alcanivorax borkumensis SK2]
gi|119390907|sp|Q0VS84|PTH_ALCBS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110646488|emb|CAL15964.1| aminoacyl-tRNA hydrolase [Alcanivorax borkumensis SK2]
Length = 195
Score = 217 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 97/189 (51%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G +D + + KK+ + +G L+ P
Sbjct: 7 LIVGLGNPGREYEDTRHNAGVWYVDALARRQGVFLTEDKKYFGLTATFSFEGETIRLLVP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ+ + NF+K+P + LV HD+LDL G R K GGG GHNGL+ I +
Sbjct: 67 TTFMNRSGQATAALANFFKIP-VTQILVAHDELDLPPGCARFKQGGGHGGHNGLRDIISR 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ RLR+GIG P + HVL S +R + ID + + + + S
Sbjct: 126 HGNSRDFYRLRLGIGHPGSADRVTPHVLSKPSKADRDLIDRAIDEAVHNTADMLRGDLNS 185
Query: 180 FLNHIVSVR 188
+N + +
Sbjct: 186 AMNRLNGFK 194
>gi|309804621|ref|ZP_07698686.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LactinV 09V1-c]
gi|308166013|gb|EFO68231.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LactinV 09V1-c]
Length = 185
Score = 217 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 102/187 (54%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM ID + K+KF + ++ G IL++
Sbjct: 1 MKLIVGLGNPGLKYQKTKHNTGFMAIDYYLKKNGLSFNKEKFEGFWIKTKIKGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++++F+K+ + + LVIHDD+D+ +RL+ G GHNG+KSI
Sbjct: 61 PQTYMNDSGKSVTQLVDFFKI-DAHDILVIHDDMDMPVAKIRLRKSGKSGGHNGIKSIIH 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ RL+IGI P ++ VL FSS + + +++ + + +
Sbjct: 120 CLNDSEFNRLKIGIDHPT-KETVVSWVLTPFSSDDCIKMEATFVTVSQIIDDFIDNKSIE 178
Query: 180 F-LNHIV 185
F +N
Sbjct: 179 FLMNKYN 185
>gi|107023737|ref|YP_622064.1| peptidyl-tRNA hydrolase [Burkholderia cenocepacia AU 1054]
gi|116690824|ref|YP_836447.1| peptidyl-tRNA hydrolase [Burkholderia cenocepacia HI2424]
gi|119390917|sp|Q1BTG4|PTH_BURCA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199312|sp|A0KAM7|PTH_BURCH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|105893926|gb|ABF77091.1| peptidyl-tRNA hydrolase [Burkholderia cenocepacia AU 1054]
gi|116648913|gb|ABK09554.1| peptidyl-tRNA hydrolase [Burkholderia cenocepacia HI2424]
Length = 199
Score = 217 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLIDQLAREAGTTLRDERRFHGFYAKARLHGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ + F+K+ + LV HD+LDL GT++LK GGG GHNGLK I+
Sbjct: 63 PQTYMNRSGQSVVALAQFFKILP-DQILVAHDELDLPPGTVKLKLGGGSGGHNGLKDITA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLISESARAGAKPDVANFVLKPPRREEQDVIDASIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P++ K E +
Sbjct: 182 PMVVKGELDRATMQLH 197
>gi|167031779|ref|YP_001667010.1| peptidyl-tRNA hydrolase [Pseudomonas putida GB-1]
gi|189038159|sp|B0KND4|PTH_PSEPG RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166858267|gb|ABY96674.1| Aminoacyl-tRNA hydrolase [Pseudomonas putida GB-1]
Length = 194
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++RI S KK+ ++ G L+ P
Sbjct: 6 LIVGLGNPGPEYEQTRHNAGALFVERIASAQRVSLTADKKYFGLTAKFSHQGNDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + NF+++ E LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALANFFRIKP-EAILVAHDELDLPPGVAKLKRGGGHGGHNGLRDIIAQ 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ RLR+GIG P D + VLG E+ L ID LP + +
Sbjct: 125 LGNQNDFHRLRLGIGHPGDAKLVSNFVLGRAPRAEQEKLDASIDFALGVLPDVLAGDFAK 184
Query: 180 FLNHIVSVR 188
+ + S +
Sbjct: 185 AMRELHSQK 193
>gi|78067603|ref|YP_370372.1| peptidyl-tRNA hydrolase [Burkholderia sp. 383]
gi|170734149|ref|YP_001766096.1| peptidyl-tRNA hydrolase [Burkholderia cenocepacia MC0-3]
gi|206559195|ref|YP_002229955.1| peptidyl-tRNA hydrolase [Burkholderia cenocepacia J2315]
gi|254247175|ref|ZP_04940496.1| Peptidyl-tRNA hydrolase [Burkholderia cenocepacia PC184]
gi|119390919|sp|Q39CT8|PTH_BURS3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238688612|sp|B1JYQ1|PTH_BURCC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238693088|sp|B4EAR1|PTH_BURCJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|77968348|gb|ABB09728.1| peptidyl-tRNA hydrolase [Burkholderia sp. 383]
gi|124871951|gb|EAY63667.1| Peptidyl-tRNA hydrolase [Burkholderia cenocepacia PC184]
gi|169817391|gb|ACA91974.1| Aminoacyl-tRNA hydrolase [Burkholderia cenocepacia MC0-3]
gi|198035232|emb|CAR51106.1| peptidyl-tRNA hydrolase [Burkholderia cenocepacia J2315]
Length = 199
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLIDQLAREAGTTLRDERRFHGFYAKARLHGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ + F+K+ + LV HD+LDL GT++LK GGG GHNGLK I+
Sbjct: 63 PQTYMNRSGQSVVALAQFFKILP-DQILVAHDELDLPPGTVKLKLGGGSGGHNGLKDITA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRREEQDVIDASIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P++ K E +
Sbjct: 182 PMVVKGELDRATMQLH 197
>gi|325277192|ref|ZP_08142835.1| peptidyl-tRNA hydrolase [Pseudomonas sp. TJI-51]
gi|324097678|gb|EGB95881.1| peptidyl-tRNA hydrolase [Pseudomonas sp. TJI-51]
Length = 194
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++RI S KK+ ++ G L+ P
Sbjct: 6 LIVGLGNPGPEYEQTRHNAGALFVERIASAQRVSLTADKKYFGLTAKFSHQGNDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + NF+++ E LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALANFFRIKP-EAILVAHDELDLPPGVAKLKRGGGHGGHNGLRDIIAQ 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ RLR+GIG P D + VLG E+ L ID LP + +
Sbjct: 125 LGNQNDFHRLRLGIGHPGDAKLVSNFVLGRAPRAEQEKLDASIDFALGVLPDVLAGDFAK 184
Query: 180 FLNHIVSVR 188
+ + S +
Sbjct: 185 AMRELHSQK 193
>gi|15671994|ref|NP_266168.1| peptidyl-tRNA hydrolase [Lactococcus lactis subsp. lactis Il1403]
gi|13878665|sp|Q9CJI1|PTH_LACLA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|12722848|gb|AAK04110.1|AE006240_8 peptidyl-tRNA hydrolase [Lactococcus lactis subsp. lactis Il1403]
Length = 188
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HN+GFM +D + ++K F + ++ ++G + L+K
Sbjct: 3 KMIVGLGNPGDKYEKTKHNMGFMALDLLAKELNVDFKEEKPFMSLVASTFVNGEKLFLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ ++ +Y + + + V+HDDLD G +RL+ G G NG+KS+
Sbjct: 63 PLTFMNESGRSVAPLLKYYNI-DEADLTVMHDDLDSPVGRVRLRQKGSSGGQNGIKSVIT 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + + R++IGIGRP + HVL F + ++ I ++ + +
Sbjct: 122 HVGSQTFNRVKIGIGRPKHGMTVGNHVLSGFDNEDKEIAQDGIFKAVDAMKFYLENGDFQ 181
Query: 179 SFLNHIV 185
+N
Sbjct: 182 KTMNKFN 188
>gi|296118205|ref|ZP_06836786.1| aminoacyl-tRNA hydrolase [Corynebacterium ammoniagenes DSM 20306]
gi|295968763|gb|EFG82007.1| aminoacyl-tRNA hydrolase [Corynebacterium ammoniagenes DSM 20306]
Length = 177
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 69/173 (39%), Positives = 102/173 (58%), Gaps = 3/173 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y RHNIGF + + H K+ +A+++E + G + I+ K
Sbjct: 6 LLVVGLGNPGPKYERTRHNIGFDAAEELAKSHGGNFSAHKRTNADVAEINIRGRKVIVAK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMN+SG ++ + N++K+ + N +VIHD+LD+DFG +RL+ GGGD GHNGL+ ++
Sbjct: 66 PRTFMNVSGGAVKALANYFKI-SPANIVVIHDELDMDFGEVRLRRGGGDHGHNGLRDTTK 124
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K Y RL GIGRPP VL F+ E L I + A + +
Sbjct: 125 ALGTKEYYRLSCGIGRPPGRMAPAAFVLKPFARKELEELPIICADAADLIEQM 177
>gi|113866400|ref|YP_724889.1| peptidyl-tRNA hydrolase [Ralstonia eutropha H16]
gi|123033305|sp|Q0KEQ0|PTH_RALEH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|113525176|emb|CAJ91521.1| Peptidyl-tRNA hydrolase [Ralstonia eutropha H16]
Length = 198
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 98/197 (49%), Gaps = 11/197 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ + +FH + +L L+K
Sbjct: 3 KLIVGLGNPGAEYEATRHNAGFWLVDQLARMGGATMRVEGRFHGLAARARLWDQDIWLLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG +++ + FYK+ E +V HD++DL G +LK GGG GHNGLK IS
Sbjct: 63 PSTFMNRSGLAVVSLARFYKVLPDE-IVVAHDEMDLPAGAAKLKRGGGAGGHNGLKDISA 121
Query: 121 KCG-KNYKRLRIGIGRP--------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
++Y RLR+G+G P ++ VL E+ + ID L L
Sbjct: 122 HLSTQDYWRLRLGVGHPRNAPGGAGAGREDVVNFVLKPPRREEQEAIDAAIDRCIEPLGL 181
Query: 172 LAKREDVSFLNHIVSVR 188
LA+ + + + + R
Sbjct: 182 LARGDAERAMAQLHTTR 198
>gi|254362624|ref|ZP_04978713.1| aminoacyl-tRNA hydrolase [Mannheimia haemolytica PHL213]
gi|261492867|ref|ZP_05989413.1| aminoacyl-tRNA hydrolase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261496783|ref|ZP_05993158.1| aminoacyl-tRNA hydrolase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|153094238|gb|EDN75109.1| aminoacyl-tRNA hydrolase [Mannheimia haemolytica PHL213]
gi|261307622|gb|EEY08950.1| aminoacyl-tRNA hydrolase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311408|gb|EEY12565.1| aminoacyl-tRNA hydrolase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 195
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y E RHN G I+ + + ++ K+ ++++ L+
Sbjct: 5 KLIVGLANPGVKYEETRHNAGEWLINELARIYNVSLKEEPKYFGKVAKINTAQGEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LV HD+LDL G+++LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGALANFYRIKP-EEILVAHDELDLPPGSVKLKKGGGHGGHNGLKDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N + R+RIGIG P + +VLG S ++ L +D AR + +L K V
Sbjct: 124 ALGNNKEFYRVRIGIGHPGHKDLVANYVLGKPSPSDQTLLNSAVDEAARCVEVLFKDGMV 183
Query: 179 SFLNHIVSVR 188
N + S +
Sbjct: 184 KATNRLNSFK 193
>gi|162461597|ref|NP_001104963.1| chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic precursor [Zea mays]
gi|75312019|sp|Q9M5P4|CRS2_MAIZE RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 2; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 2; Flags: Precursor
gi|6752919|gb|AAF27939.1|AF225708_1 CRS2 [Zea mays]
Length = 256
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG++Y RHN+GF +DRI + + + + G + + +++KP
Sbjct: 62 WLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKP 121
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q++MN SG+++ + +Y++P L + L+I+DD L G LRL+ GG HNGL+++ E
Sbjct: 122 QSYMNYSGEAIGPLAAYYQVP-LRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEH 180
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RL IGIG PP +L FSS ER + ++ ++ L +
Sbjct: 181 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSG 240
Query: 180 FLNHIVSVRK 189
V+K
Sbjct: 241 STERFNLVQK 250
>gi|92113646|ref|YP_573574.1| peptidyl-tRNA hydrolase [Chromohalobacter salexigens DSM 3043]
gi|119390925|sp|Q1QXD3|PTH_CHRSD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|91796736|gb|ABE58875.1| peptidyl-tRNA hydrolase [Chromohalobacter salexigens DSM 3043]
Length = 194
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 65/188 (34%), Positives = 96/188 (51%), Gaps = 4/188 (2%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKPQ 62
+ GLGNPG EY RHN G ++ + P ++KF + ++ + G L+ P
Sbjct: 7 IIGLGNPGTEYDATRHNAGAWVVEALARDSLTPLRAERKFLGQYAKVRYAGHDVHLLVPS 66
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG+++ + F+KL E L+ HD+LD+ GT R K GGG GHNGL+
Sbjct: 67 TYMNRSGKAVAALCQFFKLTPDE-LLIAHDELDIAPGTARYKHGGGHGGHNGLRDTVSAL 125
Query: 123 GKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + + RLRIGIG P ++ +VLG ER + ID R+LP +
Sbjct: 126 GNDKSFHRLRIGIGHPGSAKQVVNYVLGRPGKAERAAIDAAIDECLRTLPDVLDGNWAGA 185
Query: 181 LNHIVSVR 188
+N + S
Sbjct: 186 MNRLHSFN 193
>gi|72383452|ref|YP_292807.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. NATL2A]
gi|119390978|sp|Q46HC4|PTH_PROMT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|72003302|gb|AAZ59104.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. NATL2A]
Length = 202
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 64/195 (32%), Positives = 97/195 (49%), Gaps = 8/195 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILI 59
+ ++ GLGNPG EY + RHN+GFM ++ I + + KK E +T L+
Sbjct: 6 LKLLVGLGNPGTEYEKTRHNVGFMVLEEIARKNNCSFRESKKLFGRTCEYGSGIEKTRLL 65
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SG+S+ +++ +V+ DD+DL G +R+++ G GHNGLKSI
Sbjct: 66 MPNTYMNESGKSVRSAKDWFDF-QNNQLIVLVDDMDLPLGKIRVRSKGSSGGHNGLKSII 124
Query: 120 EKCGK-NYKRLRIGIGRPPD-----TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
G +KRL+IGIG P + + + HVLG FS E L II I + +
Sbjct: 125 NHLGTAEFKRLKIGIGAPSNDQQERKSKTVSHVLGRFSKEEFIILNFIIQEIISCIESIT 184
Query: 174 KREDVSFLNHIVSVR 188
+ S +
Sbjct: 185 SNNWEKISTRLNSYK 199
>gi|320199243|gb|EFW73834.1| Peptidyl-tRNA hydrolase [Escherichia coli EC4100B]
Length = 189
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 67/185 (36%), Positives = 93/185 (50%), Gaps = 4/185 (2%)
Query: 7 LGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKPQTFM 65
L NPG EY RHN G +D + P ++ KF S L G L+ P TFM
Sbjct: 4 LANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVPTTFM 63
Query: 66 NLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN 125
NLSG+++ + +F+++ + + LV HD+LDL G + K GGG GHNGLK I K G N
Sbjct: 64 NLSGKAVAVMASFFRI-SPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNN 122
Query: 126 --YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNH 183
+ RLRIGIG P D ++ VLG E+ + ID AR + N
Sbjct: 123 PNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLTKATNR 182
Query: 184 IVSVR 188
+ + +
Sbjct: 183 LHAFK 187
>gi|219870978|ref|YP_002475353.1| peptidyl-tRNA hydrolase [Haemophilus parasuis SH0165]
gi|254783871|sp|B8F503|PTH_HAEPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219691182|gb|ACL32405.1| peptidyl-tRNA hydrolase [Haemophilus parasuis SH0165]
Length = 194
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y E RHN G ++ + ++ K+ ++++ L+
Sbjct: 5 KLIVGLANPGAKYEETRHNAGEWLVNELARVFNVTLKEEAKYFGKVAKINTPQGEVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LV HD+LDL G ++K GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGSLANFYRIKP-EEILVAHDELDLLPGVAKIKQGGGHGGHNGLKDIIA 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N+ R+RIGIG P + +VLG S ++ + +D +R + LL K V
Sbjct: 124 ALGNSNNFYRVRIGIGHPGHKDLVASYVLGKPSPSDQPLINVAVDEASRCVELLFKEGIV 183
Query: 179 SFLNHIVSVR 188
N + +
Sbjct: 184 KATNRLNGFK 193
>gi|111022659|ref|YP_705631.1| peptidyl-tRNA hydrolase [Rhodococcus jostii RHA1]
gi|119390996|sp|Q0S4R3|PTH_RHOSR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110822189|gb|ABG97473.1| aminoacyl-tRNA hydrolase [Rhodococcus jostii RHA1]
Length = 190
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 114/185 (61%), Gaps = 3/185 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y + RHN+GFM + + KK AEI +G+ +G TIL KP
Sbjct: 7 LVVGLGNPGPQYEKTRHNVGFMVAGVLSARMGGKFSAHKKSGAEIVQGRFEGRPTILAKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
++FMNLSG ++ + F+ + + N +VIHD+LDLDFGT+RLK GGG+ GHNGL+SIS
Sbjct: 67 RSFMNLSGSAVAGLARFFSV-DPGNIVVIHDELDLDFGTIRLKQGGGEGGHNGLRSISSA 125
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G K+Y R R+GIGRPP +VL FSS ER L + + A ++ L+ + +
Sbjct: 126 LGTKDYLRTRVGIGRPPGRMDPASYVLKPFSSVERKELDLVCEESADAVELVLRVGLEAA 185
Query: 181 LNHIV 185
N +
Sbjct: 186 QNRLH 190
>gi|291286017|ref|YP_003502833.1| peptidyl-tRNA hydrolase [Denitrovibrio acetiphilus DSM 12809]
gi|290883177|gb|ADD66877.1| peptidyl-tRNA hydrolase [Denitrovibrio acetiphilus DSM 12809]
Length = 197
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 72/188 (38%), Positives = 115/188 (61%), Gaps = 5/188 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y RHN+GF+ D++ S + + K F E +E +DG + ++KP
Sbjct: 2 LIVGLGNPGEKYDRTRHNLGFLVADKLASENSAS-FSKGFKGEYAEFFMDGGKHYILKPY 60
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG+S+ + +YK+P +E+ + +HDDLD++FG L+LK GG D GH G++S+++
Sbjct: 61 TYMNLSGESVQPLAAYYKIP-VEDIIAVHDDLDIEFGRLKLKKGGNDGGHKGIRSMAQML 119
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G K++ RL++GIG+ I HVLG FS E L ID +++ K +
Sbjct: 120 GDKDFIRLKMGIGKDGRR-DTIGHVLGKFSPQESEKLDEFIDIGVKAVVCCIKEGLRPAM 178
Query: 182 NHIVSVRK 189
N + + RK
Sbjct: 179 N-VFNTRK 185
>gi|224368791|ref|YP_002602952.1| Pth [Desulfobacterium autotrophicum HRM2]
gi|223691507|gb|ACN14790.1| Pth [Desulfobacterium autotrophicum HRM2]
Length = 193
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 67/182 (36%), Positives = 106/182 (58%), Gaps = 2/182 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F+VAGLGNPG Y + RHNIGF+ + + H P K +F++ + G ++GL ++ +P
Sbjct: 7 FMVAGLGNPGRNYAQTRHNIGFLVAQSLVATHGLPPEKNRFNSSYTRGVINGLNVVVARP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q +MN SG + ++ ++K+ N +V+HDDLDLDFG + + G GHNG++SI E
Sbjct: 67 QAYMNRSGPPVQQLAAYFKI-QTRNIIVVHDDLDLDFGRMLIAVNRGHGGHNGIRSIIEA 125
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G K + R+R+G+GRP + HVLG F+ E L +I + + +R +
Sbjct: 126 LGTKEFNRVRVGVGRPQGDQEVTGHVLGRFAPSEACDLDRLISLGVDACLAIMERGVSAA 185
Query: 181 LN 182
+N
Sbjct: 186 MN 187
>gi|309809618|ref|ZP_07703475.1| aminoacyl-tRNA hydrolase [Lactobacillus iners SPIN 2503V10-D]
gi|312874282|ref|ZP_07734314.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LEAF 2052A-d]
gi|312874834|ref|ZP_07734853.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LEAF 2053A-b]
gi|329920471|ref|ZP_08277203.1| aminoacyl-tRNA hydrolase [Lactobacillus iners SPIN 1401G]
gi|308170099|gb|EFO72135.1| aminoacyl-tRNA hydrolase [Lactobacillus iners SPIN 2503V10-D]
gi|311089579|gb|EFQ48004.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LEAF 2053A-b]
gi|311090155|gb|EFQ48567.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LEAF 2052A-d]
gi|328936147|gb|EGG32600.1| aminoacyl-tRNA hydrolase [Lactobacillus iners SPIN 1401G]
Length = 185
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 102/187 (54%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM ID + K+KF + ++ G IL++
Sbjct: 1 MKLIVGLGNPGLKYQKTKHNTGFMAIDYYLKKNGLSFNKEKFEGFWIKTKIKGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++++F+K+ + + LVIHDD+D+ +RL+ G GHNG+KSI
Sbjct: 61 PQTYMNDSGKSVTQLVDFFKI-DAHDILVIHDDMDMPVAKIRLRKSGKSGGHNGIKSIIN 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ RL+IGI P ++ VL FSS + + +++ + + +
Sbjct: 120 CLNDSEFNRLKIGIDHPT-KETVVSWVLTPFSSDDCIKMEATFATVSQIIDDFIDNKSIE 178
Query: 180 F-LNHIV 185
F +N
Sbjct: 179 FLMNKYN 185
>gi|300172730|ref|YP_003771895.1| peptidyl-tRNA hydrolase [Leuconostoc gasicomitatum LMG 18811]
gi|299887108|emb|CBL91076.1| Peptidyl-tRNA hydrolase [Leuconostoc gasicomitatum LMG 18811]
Length = 189
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 67/188 (35%), Positives = 103/188 (54%), Gaps = 2/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G EY + RHNIGFM ID S H K A I++ +DG + +L+K
Sbjct: 1 MKYIIGLGNIGLEYDKTRHNIGFMAIDAFASAHSVSFAPSKQFATIAKLTVDGEQVVLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ ++++Y + +V+ DD+DL F LR + G GHNGLKSI
Sbjct: 61 PTTYMNDSGKAVRAILDYYGGDINTDVMVLVDDMDLPFSKLRFRAKGSAGGHNGLKSIMA 120
Query: 121 KCG-KNYKRLRIGIGRPPD-TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G + + RL+ G+G P +I +VLG FS E + ++D ++ + V
Sbjct: 121 HTGSQTFLRLKFGLGHPNHEQQAVIHYVLGKFSRAETDDVNHMLDRSTLAIEEWIQGNSV 180
Query: 179 SFLNHIVS 186
S L++ +
Sbjct: 181 SELSNKYN 188
>gi|187736599|ref|YP_001878711.1| Aminoacyl-tRNA hydrolase [Akkermansia muciniphila ATCC BAA-835]
gi|238691875|sp|B2UPQ2|PTH_AKKM8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|187426651|gb|ACD05930.1| Aminoacyl-tRNA hydrolase [Akkermansia muciniphila ATCC BAA-835]
Length = 190
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 62/183 (33%), Positives = 93/183 (50%), Gaps = 7/183 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKF-HAEISEGQLDGLRTILIK 60
++ GLGNPG Y + RHN GFM +DR+ + + E++ G +L+K
Sbjct: 6 KMIVGLGNPGRTYEDTRHNAGFMVLDRLAARWGAVFKADRQRKCEVA----AGPGVLLVK 61
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + +M F+KL + + VIHD++D G ++L+ G GHNG+KS+
Sbjct: 62 PSTFMNESGLCVGPMMRFFKL-DPRSVFVIHDEVDFPLGVIKLREKGSAGGHNGIKSLIA 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + RLR GIG+P +I HVLG F ER L + ++ +
Sbjct: 121 HMGTQEFPRLRFGIGQPRGKGEMIGHVLGKFRPEERELLDVTLGKAEDAVLYTMEHGITR 180
Query: 180 FLN 182
N
Sbjct: 181 AGN 183
>gi|296140893|ref|YP_003648136.1| peptidyl-tRNA hydrolase [Tsukamurella paurometabola DSM 20162]
gi|296029027|gb|ADG79797.1| peptidyl-tRNA hydrolase [Tsukamurella paurometabola DSM 20162]
Length = 194
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 76/189 (40%), Positives = 111/189 (58%), Gaps = 5/189 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHA-EISEGQLDGLRTILIK 60
IV GLGNPG +Y RHNIGF +D + + + K E++ +L G L K
Sbjct: 6 LIVVGLGNPGEKYAGTRHNIGFDVVDELATRARTSFSRHKKSGAEVAGARLAGRPVYLAK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ+FMNLSGQ + + FY + + + +HD+LD+DFG +RLK GGG+ GHNGL+S+++
Sbjct: 66 PQSFMNLSGQPVSALARFYSVEPT-DVIAVHDELDIDFGLVRLKRGGGEGGHNGLRSLTQ 124
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR--ED 177
G K+Y R+R GIGRPP +VL F+S ER + ++ N A ++ LL R +
Sbjct: 125 HLGTKDYLRVRAGIGRPPGRQDPADYVLKPFASAERTEVPLLVTNAADAVELLISRDLDL 184
Query: 178 VSFLNHIVS 186
S N + +
Sbjct: 185 ESAQNTVHA 193
>gi|226946188|ref|YP_002801261.1| peptidyl-tRNA hydrolase [Azotobacter vinelandii DJ]
gi|259535141|sp|C1DEV7|PTH_AZOVD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226721115|gb|ACO80286.1| peptidyl-tRNA hydrolase [Azotobacter vinelandii DJ]
Length = 194
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++R+ S + KK+ + + G L+ P
Sbjct: 6 LIVGLGNPGPEYEQTRHNAGALFVERVASAKGVRLSADKKYFGLVGKFSHQGRDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + NF+++P LV HD+LD+ GT RLK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALANFFRIPPAA-ILVAHDELDMPPGTARLKQGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLR+GIG P D + VLG E+ L ID LP +
Sbjct: 125 FGNQNSFYRLRLGIGHPGDKNLVSGFVLGRAPRSEQEKLEACIDFALDVLPDMLDGNWTR 184
Query: 180 FLNHIVSVR 188
+ + S +
Sbjct: 185 AMQQLHSRK 193
>gi|152987749|ref|YP_001350653.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa PA7]
gi|166229437|sp|A6VC68|PTH_PSEA7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|150962907|gb|ABR84932.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa PA7]
Length = 194
Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats.
Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++R+ ++K+ + + G L+ P
Sbjct: 6 LIVGLGNPGPEYDQTRHNAGALFVERLAHAQGISLVAERKYFGLVGKFSHQGKDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + F+++P + LV HD+LD+ G +LKTGGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALAGFFRIPP-DAILVAHDELDMPPGVAKLKTGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLR+GIG P ++ + +VLG E+ L ID LP + +
Sbjct: 125 LGNQNSFHRLRLGIGHPGHSSLVSGYVLGRAPRSEQELLDTSIDFALGVLPEMLAGDWTR 184
Query: 180 FLNHIVSVR 188
+ + S +
Sbjct: 185 AMQKLHSQK 193
>gi|153952327|ref|YP_001398643.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. doylei 269.97]
gi|166199321|sp|A7H563|PTH_CAMJD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|152939773|gb|ABS44514.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. doylei 269.97]
Length = 181
Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats.
Identities = 76/189 (40%), Positives = 111/189 (58%), Gaps = 10/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M +V GLGN G EY RHN+GFM ID + F KF E+ + G +L+
Sbjct: 1 MILVVGLGNIGVEYENTRHNVGFMLIDLLLKESNFTNLTNSKFKGELFKI---GSSLLLL 57
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG S+ V +FYK E +VIHDD+D++ G LR K GG GHNGLKSI
Sbjct: 58 KPSTYMNNSGLSVKAVNDFYKC---ERMIVIHDDIDINLGALRFKKGGSSGGHNGLKSID 114
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG +Y+R+RIG+G+ ++I HVL F E L ++++ ++L L +++D+S
Sbjct: 115 ALCGNDYERVRIGVGK---GENVISHVLDKFKPEEEITLSKVLEHTKKALLELIEKDDLS 171
Query: 180 FLNHIVSVR 188
++ S++
Sbjct: 172 AISSKYSLK 180
>gi|255036436|ref|YP_003087057.1| peptidyl-tRNA hydrolase [Dyadobacter fermentans DSM 18053]
gi|254949192|gb|ACT93892.1| peptidyl-tRNA hydrolase [Dyadobacter fermentans DSM 18053]
Length = 186
Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats.
Identities = 74/186 (39%), Positives = 100/186 (53%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGN G EY RHN GFM +DR+ + H F +K A ++E + G IKP
Sbjct: 3 YLIAGLGNIGPEYAFTRHNAGFMVLDRLAAQHDFKFSFEKL-AFVAEWKYKGRHIYFIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ M+ YK+ EN L I D+L L FGTLR+K G GHNGLK+I E
Sbjct: 62 TTYMNLSGKSIRYYMDQYKV-QAENTLTIVDELQLPFGTLRIKPKGSHGGHNGLKNIEEI 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y RLR GIG + +VL FS+ E L I+D + +
Sbjct: 121 IGTTEYPRLRFGIGNNFPRGRQVDYVLKPFSNEEMAELPIILDKAGDMVTSFCTLGIQAT 180
Query: 181 LNHIVS 186
+N+
Sbjct: 181 MNNYNQ 186
>gi|291614809|ref|YP_003524966.1| peptidyl-tRNA hydrolase [Sideroxydans lithotrophicus ES-1]
gi|291584921|gb|ADE12579.1| peptidyl-tRNA hydrolase [Sideroxydans lithotrophicus ES-1]
Length = 192
Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D + H KFH ++ + G L+K
Sbjct: 6 KLIVGLGNPGSEYEATRHNAGFWWLDELAREHNANFRTDNKFHGLVARTTMHGHEVHLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN+SG++++ + FYK+ LV+HD+LDL G +LK GGG GHNGLK I
Sbjct: 66 PQTFMNVSGRAVVALALFYKILP-NQILVVHDELDLPPGGAKLKLGGGHGGHNGLKDIIA 124
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K + RLRIGIG P + A ++ +VL E+ + + L+ + + +
Sbjct: 125 HLGTKEFWRLRIGIGHPGERAEVVNYVLKAPRKEEQVLIDEAMQRAQDVASLIIEGKMEA 184
Query: 180 FLNHIVS 186
+ + +
Sbjct: 185 AMLKLHT 191
>gi|119897044|ref|YP_932257.1| peptidyl-tRNA hydrolase [Azoarcus sp. BH72]
gi|166199304|sp|A1K3G5|PTH_AZOSB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119669457|emb|CAL93370.1| Pth protein [Azoarcus sp. BH72]
Length = 218
Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 101/186 (54%), Gaps = 5/186 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG EY E RHN GF +R+ + + +FH ++ + G L+ P
Sbjct: 8 LVVGLGNPGAEYSETRHNAGFWFCERLADTLGVRFSHESRFHGLVANAREAG--VWLLMP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SGQ++ + FY++ E LV+HD+LD+ G LRLK GGG GHNGLK S
Sbjct: 66 QTYMNRSGQAIGALARFYRIAPAE-ILVVHDELDIPPGQLRLKFGGGLGGHNGLKDTSAH 124
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLR+GIG P D ++ VL E+ + +D + P LAK + +
Sbjct: 125 LGTNDYWRLRVGIGHPGDRNEVVNFVLKPARREEQTLIDESLDRALAAWPTLAKGDWNTA 184
Query: 181 LNHIVS 186
+ +
Sbjct: 185 TQRLNA 190
>gi|257455799|ref|ZP_05621025.1| peptidyl-tRNA hydrolase [Enhydrobacter aerosaccus SK60]
gi|257446813|gb|EEV21830.1| peptidyl-tRNA hydrolase [Enhydrobacter aerosaccus SK60]
Length = 195
Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats.
Identities = 72/189 (38%), Positives = 110/189 (58%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILI 59
+ ++ GLGNPG +Y + RHN GF ++R+ KKFH + G + G+ L+
Sbjct: 4 LKLIVGLGNPGQQYAQTRHNAGFWFVERMSETFNITMTLDKKFHGLVGRGVVYGMDIRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMN SG++++ ++NFY + N E L++HD+LDLD G +RLKTGGG GHNGL+ I
Sbjct: 64 LPHTFMNKSGEAVVPMVNFYGIHNDE-LLIVHDELDLDVGRMRLKTGGGHGGHNGLRDIV 122
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ RLR+GIG P + + +VLG ++ E+ ++D R+LP L +
Sbjct: 123 PHIGADFHRLRLGIGHPGHKSKVSGYVLGKPTADEQIAFNSMLDAAMRTLPDLVTGDLSK 182
Query: 180 FLNHIVSVR 188
I S +
Sbjct: 183 AQQAINSFK 191
>gi|257459023|ref|ZP_05624142.1| peptidyl-tRNA hydrolase [Campylobacter gracilis RM3268]
gi|257443408|gb|EEV18532.1| peptidyl-tRNA hydrolase [Campylobacter gracilis RM3268]
Length = 185
Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats.
Identities = 76/190 (40%), Positives = 106/190 (55%), Gaps = 9/190 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M ++AGLGNP +Y + RHN+GFM ID I F KF E+ +L+
Sbjct: 1 MILIAGLGNPAQKYADTRHNVGFMLIDEILKTGGFSELGSSKFQGEL----FKKGSLLLL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQTFMNLSG S+ V +FYK E +++HDD+DLD G ++ K GG GHNG+KSI
Sbjct: 57 KPQTFMNLSGNSVKAVNDFYK---PERIIIVHDDIDLDLGAVKFKKGGSSGGHNGIKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y+R+RIG+G+ VLGNFS ER L I+ +AR++ L +
Sbjct: 114 ALIGADYERVRIGVGKKQQDQDAANFVLGNFSESEREKLGEILPYVARAVKELICSDIEQ 173
Query: 180 FLNHIVSVRK 189
+++K
Sbjct: 174 VAQK-FTIKK 182
>gi|146306087|ref|YP_001186552.1| peptidyl-tRNA hydrolase [Pseudomonas mendocina ymp]
gi|166229438|sp|A4XR54|PTH_PSEMY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145574288|gb|ABP83820.1| peptidyl-tRNA hydrolase [Pseudomonas mendocina ymp]
Length = 196
Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++R+ A +K+ + + G L+ P
Sbjct: 6 LIVGLGNPGPEYDQTRHNAGALFVERVAESQRVNLAVDRKYFGLVGKFNHQGREVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + NF+K+ E LV HD+LD+ G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALANFFKIKP-EEILVAHDELDMPPGVAKLKQGGGHGGHNGLRDIISQ 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLR+GIG P + + +VLG E+ L ID LP + +
Sbjct: 125 LGNQNNFHRLRLGIGHPGHASLVSGYVLGRAPRSEQELLDQSIDFALDVLPEILAGDWTV 184
Query: 180 FLNHIVSVR 188
+ + S +
Sbjct: 185 AMRKLHSQK 193
>gi|71082804|ref|YP_265523.1| peptidyl-tRNA hydrolase [Candidatus Pelagibacter ubique HTCC1062]
gi|119390975|sp|Q4FPG9|PTH_PELUB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71061917|gb|AAZ20920.1| Peptidyl-tRNA hydrolase [Candidatus Pelagibacter ubique HTCC1062]
Length = 186
Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats.
Identities = 73/186 (39%), Positives = 108/186 (58%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP + NRHNIGF ID ++ K KF ++ G ++ + IK
Sbjct: 1 MLLFVGLGNPTPDSENNRHNIGFKLIDALNQKFGLSKQKPKFKGLLTTGNVEDKKVYAIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + E++ ++K+ + E+ +V HDDLDL+FG ++ K G AGHNG++SI +
Sbjct: 61 PLTFMNNSGICIRELIEYFKI-DAEDVIVFHDDLDLEFGKVKAKFAGSSAGHNGIESIDK 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
GK+Y R+RIGIGRP A + HVL +F E L I NI S+ +L ++ F
Sbjct: 120 FIGKDYSRVRIGIGRPKTKADVADHVLKDFDEDEMIQLEKITKNIIDSMAILIDKKLDLF 179
Query: 181 LNHIVS 186
+ + +
Sbjct: 180 SSTVNN 185
>gi|225075209|ref|ZP_03718408.1| hypothetical protein NEIFLAOT_00209 [Neisseria flavescens
NRL30031/H210]
gi|224953384|gb|EEG34593.1| hypothetical protein NEIFLAOT_00209 [Neisseria flavescens
NRL30031/H210]
Length = 192
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN+GF +D + + +KKF+ E++ L+K
Sbjct: 6 KLIVGLGNPGQEYEQTRHNVGFWLLDELAWKWKVNFKDEKKFYGEVARATTPDGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PMTFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G N+ RLR+GI P D ++ +VL S R + I + LP + E
Sbjct: 125 RLGTPNFYRLRLGIDHPGDRNLVVGYVLNKPSVEHRQQIDDSIAKSLQGLPAVLNGEWEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 ATRFLHS 191
>gi|194698704|gb|ACF83436.1| unknown [Zea mays]
Length = 256
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG++Y RHN+GF +DRI + + + + G + + +++KP
Sbjct: 62 WLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKP 121
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q++MN SG+++ + +Y++P L + L+I+DD L G LRL+ GG HNGL+++ E
Sbjct: 122 QSYMNYSGEAIGPLAAYYQVP-LRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEH 180
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RL IGIG PP +L FSS ER + ++ ++ L +
Sbjct: 181 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSG 240
Query: 180 FLNHIVSVRK 189
V+K
Sbjct: 241 STERFNLVQK 250
>gi|170723624|ref|YP_001751312.1| peptidyl-tRNA hydrolase [Pseudomonas putida W619]
gi|229485510|sp|B1JEQ3|PTH_PSEPW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169761627|gb|ACA74943.1| Aminoacyl-tRNA hydrolase [Pseudomonas putida W619]
Length = 194
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++RI S +K+ ++ G L+ P
Sbjct: 6 LIVGLGNPGPEYEQTRHNAGALFVERIASAQRVSLTADRKYFGLTAKFSHQGNDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + NF+++ E LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALANFFRIKP-EAILVAHDELDLPPGVAKLKRGGGHGGHNGLRDIIAQ 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ RLR+GIG P D + VLG E+ L ID LP + +
Sbjct: 125 LGNQNDFHRLRLGIGHPGDAKLVSNFVLGRAPRAEQEKLDASIDFALGVLPDVLAGDFAK 184
Query: 180 FLNHIVSVR 188
+ + S +
Sbjct: 185 AMRELHSQK 193
>gi|330818354|ref|YP_004362059.1| Peptidyl-tRNA hydrolase [Burkholderia gladioli BSR3]
gi|327370747|gb|AEA62103.1| Peptidyl-tRNA hydrolase [Burkholderia gladioli BSR3]
Length = 201
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGHYAKARLYGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ V F+K+ E LV HD+LDL G+++LK GGG GHNGLK IS
Sbjct: 63 PQTYMNRSGQSVVAVAQFFKILPDE-ILVAHDELDLPPGSVKLKLGGGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRELIPEGARAGAKPDVANFVLKPPRREEQEVIDASIERSLAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P+ K E + +
Sbjct: 182 PIFVKGETERAVMQLH 197
>gi|118603028|ref|YP_904243.1| peptidyl-tRNA hydrolase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|166229448|sp|A1AXW5|PTH_RUTMC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118567967|gb|ABL02772.1| peptidyl-tRNA hydrolase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 191
Score = 216 bits (552), Expect = 8e-55, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y NRHN GF + + + K KF E+++ + G + L+K
Sbjct: 4 KLIVGLGNPGKDYQSNRHNAGFWLCEALAHLYAGNFKKETKFFGEVAQINISGRKVRLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P FMN SGQS+ ++NFY++ E L++HD+LD+D G ++K GG GHNGL+ +
Sbjct: 64 PTVFMNCSGQSIQSIVNFYQINTNE-ILIVHDELDIDPGIAKIKFDGGHGGHNGLRDTIQ 122
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLRIGIG P D + + VL S E + ++N + + +
Sbjct: 123 TLGTKAFHRLRIGIGHPGDKSQVTNFVLHAPSKGELEKIQNSLNNSLQIIEDMINGNFDK 182
Query: 180 FLNHIVS 186
+ + +
Sbjct: 183 AIKTLHT 189
>gi|308388981|gb|ADO31301.1| putative peptidyl-tRNA hydrolase [Neisseria meningitidis alpha710]
gi|325202410|gb|ADY97864.1| peptidyl-tRNA hydrolase [Neisseria meningitidis M01-240149]
gi|325203880|gb|ADY99333.1| peptidyl-tRNA hydrolase [Neisseria meningitidis M01-240355]
gi|325206364|gb|ADZ01817.1| peptidyl-tRNA hydrolase [Neisseria meningitidis M04-240196]
gi|325207838|gb|ADZ03290.1| peptidyl-tRNA hydrolase [Neisseria meningitidis NZ-05/33]
Length = 192
Score = 216 bits (552), Expect = 8e-55, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN GF +D + +KKF E++ L L+K
Sbjct: 6 KMLVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEKKFFGEVARAALPDGDVWLLK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I
Sbjct: 66 PATFMNRSGQAVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQA 124
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K G +Y RLR+GI P D ++ +VL S+ R + + +++P + +
Sbjct: 125 KLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSTEHRRQIDDAVAKSLQAIPDILAGKWEE 184
Query: 180 FLNHIVS 186
+ S
Sbjct: 185 ATRFLHS 191
>gi|238028670|ref|YP_002912901.1| peptidyl-tRNA hydrolase [Burkholderia glumae BGR1]
gi|237877864|gb|ACR30197.1| Peptidyl-tRNA hydrolase [Burkholderia glumae BGR1]
Length = 201
Score = 216 bits (552), Expect = 9e-55, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF C+D++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWCVDQLAREAGATLRDERRFHGHYAKARLYGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ V F+K+ E LV HD+LDL G ++LK GGG GHNGLK IS
Sbjct: 63 PQTYMNRSGQSVVAVAQFFKILPDE-ILVAHDELDLPPGAVKLKLGGGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPEGSRAGAKPDVANFVLKPPRREEQDVIDASIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P+ K E + +
Sbjct: 182 PIFVKGEAERAVMQLH 197
>gi|115352915|ref|YP_774754.1| peptidyl-tRNA hydrolase [Burkholderia ambifaria AMMD]
gi|171320166|ref|ZP_02909228.1| Aminoacyl-tRNA hydrolase [Burkholderia ambifaria MEX-5]
gi|172061763|ref|YP_001809415.1| peptidyl-tRNA hydrolase [Burkholderia ambifaria MC40-6]
gi|122322182|sp|Q0BBQ3|PTH_BURCM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238689134|sp|B1YN54|PTH_BURA4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|115282903|gb|ABI88420.1| peptidyl-tRNA hydrolase [Burkholderia ambifaria AMMD]
gi|171094580|gb|EDT39632.1| Aminoacyl-tRNA hydrolase [Burkholderia ambifaria MEX-5]
gi|171994280|gb|ACB65199.1| Aminoacyl-tRNA hydrolase [Burkholderia ambifaria MC40-6]
Length = 199
Score = 216 bits (552), Expect = 9e-55, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLVDQLAREAGATLRDERRFHGFYAKARLHGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ + +F+K+ + LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 63 PQTYMNRSGQSVVALASFFKILP-DQILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPEGARAGAKPDVANFVLKPPRREEQDVIDASIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P++ K E +
Sbjct: 182 PMVVKGELDRATMQLH 197
>gi|330502026|ref|YP_004378895.1| peptidyl-tRNA hydrolase [Pseudomonas mendocina NK-01]
gi|328916312|gb|AEB57143.1| peptidyl-tRNA hydrolase [Pseudomonas mendocina NK-01]
Length = 196
Score = 216 bits (552), Expect = 9e-55, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 100/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++R+ + + +K+ + + G L+ P
Sbjct: 6 LIVGLGNPGPEYDQTRHNAGALFVERVAASQRVNLSVDRKYFGLVGKFNHQGREVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + NF+K+ E LV HD+LD+ G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALANFFKIKP-EEILVAHDELDMPPGVAKLKQGGGHGGHNGLRDIIAQ 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ RLR+GIG P + + +VLG E+ L ID LP + +
Sbjct: 125 LGNQNNFHRLRLGIGHPGHASLVSGYVLGRAPRSEQELLDKSIDFALDVLPEILAGDWTV 184
Query: 180 FLNHIVSVR 188
+ + S +
Sbjct: 185 AMRKLHSQK 193
>gi|323126265|gb|ADX23562.1| peptidyl-tRNA hydrolase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 189
Score = 216 bits (552), Expect = 9e-55, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 108/187 (57%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HNIGFM +D++ + + K F A+I ++ + +K
Sbjct: 3 KMIVGLGNPGSKYEKTKHNIGFMAVDKLVNKLDVTFTEDKNFKAQIGSAFINHEKIYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + +E+ +VI+DDLD++ G LRL+ G GHNG+KSI
Sbjct: 63 PTTFMNNSGVAVKALLTYYNIA-IEDLIVIYDDLDMEVGKLRLRAKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL-LAKREDV 178
+ G + + R+++GIGRP +I HV+G+FS+ + + +D + ++ L +
Sbjct: 122 QLGTQEFDRIKVGIGRPLKGMTVINHVMGHFSTEDNIAIALTLDKVVNAVNFYLQENNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQKFN 188
>gi|323342262|ref|ZP_08082494.1| aminoacyl-tRNA hydrolase [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463374|gb|EFY08568.1| aminoacyl-tRNA hydrolase [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 186
Score = 216 bits (552), Expect = 9e-55, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 99/187 (52%), Gaps = 10/187 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN GF+ ID + S KF A I+E + + +L+K
Sbjct: 5 MKVIVGLGNPGKQYENTRHNAGFLVIDEVASKLGVSISTNKFKALIAETFVGTEKVVLVK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ EVM +Y + +LE+ LVI DD+D+ G+LRL+ G G G+KSI +
Sbjct: 65 PQTFMNLSGESVGEVMRYYDV-DLEDLLVISDDMDITVGSLRLREKGSSGGQKGVKSIID 123
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DV 178
G N + RL++GIG+ + VLG I A+ + +
Sbjct: 124 HLGSNEFLRLKVGIGK-STQIKTVDWVLGKIDEE------TAISLGAQCVSDFISGKRTD 176
Query: 179 SFLNHIV 185
+N
Sbjct: 177 QLMNEYN 183
>gi|170701089|ref|ZP_02892065.1| Aminoacyl-tRNA hydrolase [Burkholderia ambifaria IOP40-10]
gi|170133990|gb|EDT02342.1| Aminoacyl-tRNA hydrolase [Burkholderia ambifaria IOP40-10]
Length = 199
Score = 216 bits (552), Expect = 9e-55, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLIDQLAREAGATLRDERRFHGFYAKARLHGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ + +F+K+ + LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 63 PQTYMNRSGQSVVALASFFKILP-DQILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPEGARAGAKPDVANFVLKPPRREEQDVIDASIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P++ K E +
Sbjct: 182 PMVVKGELDRATMQLH 197
>gi|322412920|gb|EFY03827.1| peptidyl-tRNA hydrolase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 189
Score = 216 bits (552), Expect = 9e-55, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 107/187 (57%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HNIGFM ID++ + + K F A+I ++ + +K
Sbjct: 3 KMIVGLGNPGSKYEKTKHNIGFMAIDKLVNKIDITFTEDKNFKAQIGSAFINHEKIYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + +E+ +VI+DDLD++ G LRL+ G GHNG+KSI
Sbjct: 63 PTTFMNNSGFAVKALLTYYNIA-IEDLIVIYDDLDMEVGKLRLRAKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL-LAKREDV 178
G + + R+++GIGRP +I HV+G+FS+ + + +D + ++ L +
Sbjct: 122 HLGTQEFDRIKVGIGRPLKDMTVINHVMGHFSTEDNIAIALTLDKVVNAVNFYLQENNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQKFN 188
>gi|161523691|ref|YP_001578703.1| peptidyl-tRNA hydrolase [Burkholderia multivorans ATCC 17616]
gi|189351545|ref|YP_001947173.1| peptidyl-tRNA hydrolase [Burkholderia multivorans ATCC 17616]
gi|221211190|ref|ZP_03584169.1| peptidyl-tRNA hydrolase [Burkholderia multivorans CGD1]
gi|238687045|sp|A9AEY6|PTH_BURM1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|160341120|gb|ABX14206.1| Aminoacyl-tRNA hydrolase [Burkholderia multivorans ATCC 17616]
gi|189335567|dbj|BAG44637.1| PTH1 family peptidyl-tRNA hydrolase [Burkholderia multivorans ATCC
17616]
gi|221168551|gb|EEE01019.1| peptidyl-tRNA hydrolase [Burkholderia multivorans CGD1]
Length = 199
Score = 216 bits (552), Expect = 9e-55, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLIDQLAREAGATLRDERRFHGFYAKARLYGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ + +F+K+ + LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 63 PQTYMNRSGQSVVALAHFFKILP-DQILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRREEQDVIDAAIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P++ K E +
Sbjct: 182 PMVVKGELDRATMQLH 197
>gi|193212908|ref|YP_001998861.1| peptidyl-tRNA hydrolase [Chlorobaculum parvum NCIB 8327]
gi|238692644|sp|B3QP08|PTH_CHLP8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|193086385|gb|ACF11661.1| Aminoacyl-tRNA hydrolase [Chlorobaculum parvum NCIB 8327]
Length = 190
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 67/188 (35%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP Y RHN+GF +DR+ S P K ++ G +L++
Sbjct: 1 MKLIIGLGNPEPRYDGTRHNVGFEVVDRLASSFQAPFKAGKGKYHEAKCSHRGESLLLVR 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ+++ M FYK+ ++ LVI DDL+L GT+RL+ G D G NGLK I +
Sbjct: 61 PTTYMNHSGQAVMAAMQFYKVKR-QDMLVICDDLNLPVGTIRLRAKGSDGGQNGLKHIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPD--TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+ G N + RLRIGI R D VLG F ER + +++ A ++ A
Sbjct: 120 QMGTNEFSRLRIGI-RKGDMPPGSFSSFVLGKFDEEERKVIDRVVETSADAVLDFALNGI 178
Query: 178 VSFLNHIV 185
+
Sbjct: 179 EHAMTQFN 186
>gi|119484739|ref|ZP_01619221.1| peptidyl-tRNA hydrolase [Lyngbya sp. PCC 8106]
gi|119457557|gb|EAW38681.1| peptidyl-tRNA hydrolase [Lyngbya sp. PCC 8106]
Length = 210
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 73/192 (38%), Positives = 104/192 (54%), Gaps = 9/192 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGL-RTILIK 60
++ GLGNP +Y RHNIGF ID + + +KF EG G + L+K
Sbjct: 15 LIVGLGNPESKYDRTRHNIGFAAIDILAENWQISLSENRKFQGRFGEGISRGRDQIRLLK 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ V+N+YK+P E+ LVI+DD+DL G LRL+ G GHNG+KS
Sbjct: 75 PLTYMNRSGQAIQAVVNWYKIPP-ESVLVIYDDMDLPLGRLRLRLSGSAGGHNGMKSTIS 133
Query: 121 KCG-KNYKRLRIGIGRPPDT-----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G +N+ RLRIGI +P D I HVLG FS E + ++ + ++ L K
Sbjct: 134 HLGTQNFPRLRIGIDKPKDPASSQTGETISHVLGKFSPSETQAMDKVLKLVVEAVELSLK 193
Query: 175 REDVSFLNHIVS 186
+ ++ S
Sbjct: 194 QGVEKSMSLYNS 205
>gi|238855037|ref|ZP_04645365.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 269-3]
gi|260664821|ref|ZP_05865672.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii SJ-7A-US]
gi|282934823|ref|ZP_06340057.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 208-1]
gi|313472623|ref|ZP_07813112.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 1153]
gi|238832281|gb|EEQ24590.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 269-3]
gi|239529424|gb|EEQ68425.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 1153]
gi|260561304|gb|EEX27277.1| peptidyl-tRNA hydrolase [Lactobacillus jensenii SJ-7A-US]
gi|281301095|gb|EFA93405.1| aminoacyl-tRNA hydrolase [Lactobacillus jensenii 208-1]
Length = 185
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y +HN GFMC+D + + + KF ++ ++ G IL++
Sbjct: 1 MKIIAGLGNPGKKYDRTKHNTGFMCLDNYMAKNGLSLNQNKFEGLFTKEKIAGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ +V NF+K+ + + L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTYMNESGRSISQVANFFKI-DPSDILIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGI P +T ++ VL F++ ++ + L +D
Sbjct: 120 DLGTEKFNRLKIGIRHPENT-TVVSWVLTPFNNEQQKLMDTAFSTSEDILADFISGKDAG 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNKYN 185
>gi|282858159|ref|ZP_06267354.1| aminoacyl-tRNA hydrolase [Pyramidobacter piscolens W5455]
gi|282584081|gb|EFB89454.1| aminoacyl-tRNA hydrolase [Pyramidobacter piscolens W5455]
Length = 197
Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 3/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHA-EISEGQLDGLRTILI 59
M ++AGLGNPG +Y RHN+G+ ID + + KF + G R + +
Sbjct: 1 MRLIAGLGNPGTDYALTRHNVGWEVIDCLANRLQAGEPSTKFGGACWGPLNIGGERVVFL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG ++ E+ FYK+ + LV+ DD++L G +R+++ G GHNGLKS+
Sbjct: 61 KPYTYMNNSGIAVGEIARFYKIEP-RDILVVVDDINLPLGRMRIRSKGSAGGHNGLKSVI 119
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G ++ RLR+G+ P + V G+FS+ +R + I+ +
Sbjct: 120 AHLGSADFPRLRVGVDPCPPHYDMAAWVTGHFSADDRRVVDRSIEKASAFCLEWCSSNAE 179
Query: 179 SFLNHIVS 186
+N + S
Sbjct: 180 KLMNRVNS 187
>gi|320104415|ref|YP_004180006.1| peptidyl-tRNA hydrolase [Isosphaera pallida ATCC 43644]
gi|319751697|gb|ADV63457.1| peptidyl-tRNA hydrolase [Isosphaera pallida ATCC 43644]
Length = 217
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 101/186 (54%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHN+GF +DR+ + +KF +I++ +D R +L+KP
Sbjct: 5 KLVVGLGNPGSKYEGTRHNVGFDVVDRLAQGGMGARFVRKFDGQIADTLIDHHRVLLLKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+TFMNLSG+S+ +V FY+L + LV+ DDL L G LRL+ GGGD G GL+ I
Sbjct: 65 ETFMNLSGRSVGQVARFYQLEP-SDVLVVCDDLSLPLGRLRLRPGGGDGGQKGLRDIIAH 123
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG + VL F ER + + +++ + R +
Sbjct: 124 LGTSDVPRLRLGIG-DRGSIDAADFVLSRFRPSERAAIEDALILATQAVAVWVTRGLEAA 182
Query: 181 LNHIVS 186
+N +
Sbjct: 183 MNQFNA 188
>gi|91762773|ref|ZP_01264738.1| Peptidyl-tRNA hydrolase [Candidatus Pelagibacter ubique HTCC1002]
gi|91718575|gb|EAS85225.1| Peptidyl-tRNA hydrolase [Candidatus Pelagibacter ubique HTCC1002]
Length = 186
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 108/186 (58%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP + NRHNIGF ID ++ K KF ++ G ++ + IK
Sbjct: 1 MLLFVGLGNPTPDSENNRHNIGFKLIDALNQKFGLSKQKPKFKGLLTTGNIEDKKVYAIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + E++ ++K+ + E+ +V HDDLDL+FG ++ K G AGHNG++SI +
Sbjct: 61 PLTFMNNSGICIRELIEYFKI-DAEDVIVFHDDLDLEFGKVKAKFAGSSAGHNGIESIDK 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
GK+Y R+RIGIG+P A + HVL +F E L I NI S+ +L ++ F
Sbjct: 120 FIGKDYSRVRIGIGKPKTKADVADHVLKDFDEDEMIQLEKITKNIIDSMAILIDKKLDLF 179
Query: 181 LNHIVS 186
+ + +
Sbjct: 180 SSTVNN 185
>gi|225435751|ref|XP_002283606.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297746470|emb|CBI16526.3| unnamed protein product [Vitis vinifera]
Length = 217
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 66/180 (36%), Positives = 90/180 (50%), Gaps = 3/180 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GF I+ P A +G +D + L KP
Sbjct: 18 WLFVGLGNPGDKYKGTRHNVGFEMINAFAESQGIPMDTVHCKAIFGQGFVDAVPVFLAKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S + +YKLP L +V HDD+ L G LRL GG HNGLKS+
Sbjct: 78 QTYMNLSGESAGPLAAYYKLP-LNRVVVFHDDMSLPCGVLRLHHKGGHGNHNGLKSVIYH 136
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RLRIGIG+PP +L FS+ R + + L LL+ +
Sbjct: 137 FRGNREFPRLRIGIGKPPGQMDPKAFLLQKFSATARERIDAALQEGVGVLKLLSSKGLTE 196
>gi|91205676|ref|YP_538031.1| peptidyl-tRNA hydrolase [Rickettsia bellii RML369-C]
gi|119390997|sp|Q1RI72|PTH_RICBR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|91069220|gb|ABE04942.1| Peptidyl-tRNA hydrolase [Rickettsia bellii RML369-C]
Length = 185
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 83/186 (44%), Positives = 116/186 (62%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG EY RHNIGF+ ++ I + KKKFH EI+E +G + I +
Sbjct: 1 MMLIIGLGNPGKEYEHTRHNIGFIALENIAKQYETSFSVKKKFHCEIAESTNNGQKLIFV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y +P LE VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVIAVKTYYNIP-LEKIFVIHDDIDLELGKIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+RIG+GRP ++ + +VL NFS E ID I + L+ + +
Sbjct: 120 GIIGNNYHRIRIGVGRPQNSQDVADYVLNNFSKTEYVIAEQAIDKITDNFNLILENKLEE 179
Query: 180 FLNHIV 185
F + +V
Sbjct: 180 FKSKMV 185
>gi|88704032|ref|ZP_01101747.1| Peptidyl-tRNA hydrolase [Congregibacter litoralis KT71]
gi|88701859|gb|EAQ98963.1| Peptidyl-tRNA hydrolase [Congregibacter litoralis KT71]
Length = 207
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 96/189 (50%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN G + + K+H E++E G + ++ P
Sbjct: 7 LIVGLGNPGSQYEGTRHNAGEDFARELVRQAGGTFKLETKYHGELAEVFFAGHKLRVLVP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+S+ + NFYK+ L+ HD+LD+ GT R K GG GHNGL+ I
Sbjct: 67 HTFMNRSGKSVAALANFYKIEPA-QILIAHDELDIAPGTARFKFDGGHGGHNGLRDIVPA 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLR+GIG P + +VL S +R + ID R+LPLL +
Sbjct: 126 LGNRKDFHRLRVGIGHPGSAKQVSNYVLSKASPADREAIAASIDEALRALPLLLAGDAGK 185
Query: 180 FLNHIVSVR 188
+ + S
Sbjct: 186 AMTQLHSFN 194
>gi|221199982|ref|ZP_03573025.1| peptidyl-tRNA hydrolase [Burkholderia multivorans CGD2M]
gi|221206863|ref|ZP_03579875.1| peptidyl-tRNA hydrolase [Burkholderia multivorans CGD2]
gi|221173518|gb|EEE05953.1| peptidyl-tRNA hydrolase [Burkholderia multivorans CGD2]
gi|221180221|gb|EEE12625.1| peptidyl-tRNA hydrolase [Burkholderia multivorans CGD2M]
Length = 199
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLIDQLAREAGATLRDERRFHGFYAKARLYGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ + +F+K+ + LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 63 PQTYMNRSGQSVVALAHFFKILP-DQILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRREEQDVIDAAIERSLAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P++ K E +
Sbjct: 182 PMIVKGELDRATMQLH 197
>gi|119390906|sp|Q1IHW2|PTH_ACIBL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 201
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 55/186 (29%), Positives = 101/186 (54%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y HN+GF+ +DRI + + A G ++G+ +L K
Sbjct: 1 MKLIVGLGNPGMQYQFTPHNLGFLAVDRIAEKYGIRVANRNCKALTGRGVIEGVDVVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MNLSG S+ E+++ ++ ++ +VI+DDLDL +G++R++ G GHNG++SI
Sbjct: 61 PETYMNLSGASVQELVSELEIDGTKDMIVIYDDLDLPYGSIRVRERGSAGGHNGVQSIIG 120
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + R+RIGI + +VL + + +D+ A ++ ++ +
Sbjct: 121 ALDTQEFLRIRIGIAPEFKLSDGASYVLSQLKKSQLPVVDQALDDAAEAVKVILREGPGP 180
Query: 180 FLNHIV 185
+N
Sbjct: 181 AMNRFN 186
>gi|255645504|gb|ACU23247.1| unknown [Glycine max]
Length = 244
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG++Y RHN+GF ID + + A I G + + +L KP
Sbjct: 50 WLIIGLGNPGNKYHGTRHNVGFEIIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLAKP 109
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+S+ + +Y++P L + L++ D+ L G LRL+ GG HNGLK++
Sbjct: 110 QTYMNFSGESVGPLAAYYQVP-LRHILLVFDETSLPNGVLRLQPKGGHGHHNGLKNVMGH 168
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ RL +GIG PP T + ++L FS ER + ++ ++ +
Sbjct: 169 LDGCSAFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVAAVRTVVLNGFDQ 228
Query: 180 FLNHIVSVRK 189
+N +K
Sbjct: 229 HVNRFNLGQK 238
>gi|269125254|ref|YP_003298624.1| peptidyl-tRNA hydrolase [Thermomonospora curvata DSM 43183]
gi|268310212|gb|ACY96586.1| peptidyl-tRNA hydrolase [Thermomonospora curvata DSM 43183]
Length = 206
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/187 (40%), Positives = 112/187 (59%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+++V GLGNPG +Y NRHN GFM +D + K AE+ EG+L G R +L K
Sbjct: 17 LWLVVGLGNPGPDYAGNRHNAGFMVVDVLAGRMGGRFKAHKARAEVLEGRLAGRRVVLAK 76
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMN SG + + +F+K+P LE +++HD+LD+ +G +RLK GGG GHNGL+SIS+
Sbjct: 77 PRSFMNDSGGPVARLRDFFKVP-LERIVIVHDELDIPYGAVRLKQGGGAGGHNGLRSISK 135
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y R+R G+GRPP VL +FS+ ER L + A ++ +L + +
Sbjct: 136 SLGAPDYLRVRFGVGRPPGRMDAAAFVLRDFSAAERRDLELHLQVAADAVEMLLTQGLQA 195
Query: 180 FLNHIVS 186
N +
Sbjct: 196 AQNVYHA 202
>gi|125543850|gb|EAY89989.1| hypothetical protein OsI_11554 [Oryza sativa Indica Group]
gi|125586236|gb|EAZ26900.1| hypothetical protein OsJ_10828 [Oryza sativa Japonica Group]
Length = 274
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GF ID + F A EG ++G+ +L KP
Sbjct: 61 WLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLAKP 120
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG------- 114
QT+MNLSG+S+ + +YKLP L LV DD+DL G LRL+ GG HNG
Sbjct: 121 QTYMNLSGESVGPLAAYYKLP-LNRVLVAFDDMDLPCGVLRLQPKGGYGRHNGSVDFIIM 179
Query: 115 -------LKSISEKC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
+KS+ + + RLRIGIGRPP VL F+ R + I+
Sbjct: 180 CFNELIRVKSLIYHFRKNREFGRLRIGIGRPPGQMDPKAFVLQKFNKTGRERIDSAIEEG 239
Query: 166 ARSLPLLAKREDVSF 180
L L+ +
Sbjct: 240 VEILKLVVTKGLTEA 254
>gi|189462543|ref|ZP_03011328.1| hypothetical protein BACCOP_03233 [Bacteroides coprocola DSM 17136]
gi|189430704|gb|EDU99688.1| hypothetical protein BACCOP_03233 [Bacteroides coprocola DSM 17136]
Length = 187
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 71/186 (38%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM +D + +K + + L G + IL+KP
Sbjct: 3 YLIVGLGNIGAEYHETRHNIGFMVLDALAKASNI-VFKDGRYGATATLSLKGKQLILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M K+P LEN L++ DDL L G+LRLK G DAGHNGLK I+
Sbjct: 62 STYMNLSGNAVRYWMQQEKIP-LENVLIVVDDLALPSGSLRLKGKGSDAGHNGLKHIAAT 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG I +VLG F+ + + ++ A +
Sbjct: 121 LGTQNYARLRFGIGNEFPKGGQIDYVLGKFNDDDMKLMPERLETAAEIIKSFCLAGLNIT 180
Query: 181 LNHIVS 186
+N +
Sbjct: 181 MNQFNN 186
>gi|293363961|ref|ZP_06610697.1| aminoacyl-tRNA hydrolase [Mycoplasma alligatoris A21JP2]
gi|292552451|gb|EFF41225.1| aminoacyl-tRNA hydrolase [Mycoplasma alligatoris A21JP2]
Length = 188
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 77/190 (40%), Positives = 108/190 (56%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y RHN GF+ ID+I K KF+ + ++ K
Sbjct: 1 MRLIVGLGNPGDNYRHTRHNAGFLVIDKICRILKTDLNKSKFNGNFVKM----EDLVIAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG + E+M+FYK+ N E+ LVI+D+ D + GT +K GG AGHNG+KSI +
Sbjct: 57 PMTYMNLSGNFIKEIMDFYKI-NPEDVLVIYDEKDYEIGTSSIKIGGSAAGHNGIKSIID 115
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
++K+LRIGIG+P HI +VLGNFS E L PI+D A + A +
Sbjct: 116 ALKNNSFKKLRIGIGKPKTGYHIKDYVLGNFSVEEMTLLEPILDLAAEAAISFAYNDINI 175
Query: 180 FLNHIVSVRK 189
+N +R+
Sbjct: 176 VMNKYNVLRR 185
>gi|170728022|ref|YP_001762048.1| peptidyl-tRNA hydrolase [Shewanella woodyi ATCC 51908]
gi|238688643|sp|B1KDV1|PTH_SHEWM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169813369|gb|ACA87953.1| Aminoacyl-tRNA hydrolase [Shewanella woodyi ATCC 51908]
Length = 194
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y + RHN G + + K+ + L G L+
Sbjct: 5 KLIVGLANPGEKYAQTRHNAGAWYVQELARVCGATLVADSKYFGLTARVTLHGKDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ + NF+++ + LV HD+LD++ G + K GGG GHNGLK I
Sbjct: 65 PSTFMNLSGKSVGAMANFFRI-EADEILVAHDELDMEPGVAKFKLGGGHGGHNGLKDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
N + RLRIGIG P D + + +VLG E+ + +ID RS +L ++
Sbjct: 124 SLANNKGFYRLRIGIGHPGDKSQVSNYVLGKAPGTEQAAIEDVIDEAVRSTEVLFNQDMA 183
Query: 179 SFLNHIVSVR 188
+N + + +
Sbjct: 184 KAMNRLHAYK 193
>gi|167585420|ref|ZP_02377808.1| peptidyl-tRNA hydrolase [Burkholderia ubonensis Bu]
Length = 200
Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLIDQLAREAGATLRDERRFHGFYAKARLHGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ + F+K+ + LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 63 PQTYMNRSGQSVVALAQFFKILP-DQILVAHDELDLPPGTVKLKRGGGSGGHNGLKDISA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANFVLKPPRREEQDVIDASIERALAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
P++ K E +
Sbjct: 182 PMIVKGELDRATMLLH 197
>gi|183220682|ref|YP_001838678.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189910783|ref|YP_001962338.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167775459|gb|ABZ93760.1| Peptidyl -tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779104|gb|ABZ97402.1| Peptidyl-tRNA hydrolase (PTH) [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 188
Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 100/175 (57%), Gaps = 4/175 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG +Y RHNIGFM +DR+ + K +AE + +G + L+KP
Sbjct: 4 FLIVGLGNPGDKYKHTRHNIGFMILDRLATEFGVSFKDAKKYAETT-YSWEGDKIHLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMNLSG++ + N YK+P LV+ D++DL FG ++ K GGG AGHNGLK I K
Sbjct: 63 LEFMNLSGKATQTLANLYKIPP-SQILVVQDEVDLPFGKIKNKIGGGTAGHNGLKDIVAK 121
Query: 122 CG-KNYKRLRIGIGRP-PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G +++ RLR G+G+P + VL NF++ ER L +I L +
Sbjct: 122 LGSQDFHRLRFGVGKPEKGGMEVADFVLQNFNAEERNTLDSLITESVSKLQDWIR 176
>gi|134297000|ref|YP_001120735.1| peptidyl-tRNA hydrolase [Burkholderia vietnamiensis G4]
gi|134140157|gb|ABO55900.1| peptidyl-tRNA hydrolase [Burkholderia vietnamiensis G4]
Length = 211
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 101/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++
Sbjct: 15 KLIVGLGNPGAEYTATRHNAGFWLIDQLAREAGTTLRDERRFHGFYAKARLHGEEVHLLE 74
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ V +F+K+ + LV HD+LDL GT++LK GGG GHNGLK IS
Sbjct: 75 PQTYMNRSGQSVVAVASFFKILP-DQILVAHDELDLPPGTVKLKLGGGSGGHNGLKDISA 133
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + VL E+ + I+ +
Sbjct: 134 HLSSQQYWRLRIGIGHPRDLIPEGARAGAKPDVANFVLKPPRREEQDMIDASIERALAVM 193
Query: 170 PLLAKREDVSFLNHIV 185
P++ K E +
Sbjct: 194 PMIVKGELDRATMQLH 209
>gi|312797357|ref|YP_004030279.1| peptidyl-tRNA hydrolase [Burkholderia rhizoxinica HKI 454]
gi|312169132|emb|CBW76135.1| Peptidyl-tRNA hydrolase (EC 3.1.1.29) [Burkholderia rhizoxinica HKI
454]
Length = 199
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 99/198 (50%), Gaps = 13/198 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF ID++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYAATRHNAGFWFIDQLAHETGATLRDERRFHGAYAKTRLHGAEIHLLQ 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG S++ V F+K+ ++ LV+HD+LDL G +LK GGG GHNGLK IS
Sbjct: 63 PQTFMNRSGLSVVAVAQFFKILP-QSILVVHDELDLPPGVAKLKLGGGSGGHNGLKDISA 121
Query: 121 KCG-KNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P ++ VL E+ + D +
Sbjct: 122 HLSTQQYWRLRIGIGHPRDLIPEGARAGTKPDVVNFVLKPPRKEEQQRIDAATDKSLAVM 181
Query: 170 PLLAKREDVSFLNHIVSV 187
PL+ E + +
Sbjct: 182 PLIVSGEMERAMMQLHRA 199
>gi|320450995|ref|YP_004203091.1| peptidyl-tRNA hydrolase [Thermus scotoductus SA-01]
gi|320151164|gb|ADW22542.1| peptidyl-tRNA hydrolase [Thermus scotoductus SA-01]
Length = 192
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 65/177 (36%), Positives = 101/177 (57%), Gaps = 7/177 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF+V G GNPG Y RHN+GFM +DR+ ++++ A ++E ++DG + +K
Sbjct: 1 MFLVVGQGNPGERYARTRHNLGFMVLDRL-----GLEFRERGEALLAEVEVDGEKGFFLK 55
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+ NLSGQ + ++ FYK+P E LV+HD++DL G LR K GG AG+ G+ SI++
Sbjct: 56 PLTYYNLSGQVVAPLVRFYKIPP-ERLLVVHDEMDLPLGRLRFKAGGSPAGNRGVASIAQ 114
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G + RLR+GIG+PP +VL F E + +++ ++ K
Sbjct: 115 ALGTEAFHRLRLGIGKPPSRELGAAYVLSPFLPEEWPVVERVLEAAKEAVLCWVKEG 171
>gi|323359425|ref|YP_004225821.1| peptidyl-tRNA hydrolase [Microbacterium testaceum StLB037]
gi|323275796|dbj|BAJ75941.1| peptidyl-tRNA hydrolase [Microbacterium testaceum StLB037]
Length = 194
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG--QLDGLRTILI 59
+++ GLGNPG Y RHNIG M +D + + K +A ++E + G + +L
Sbjct: 5 WVIVGLGNPGPRYEATRHNIGQMVVDELAARRSEAFRAHKANARVAETWLRPGGPKLVLA 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP +FMN+SG + FY + + E +V+HD+LD+ F T++LKTGGG GHNG++ ++
Sbjct: 65 KPNSFMNVSGGPAAGLARFYDV-DPERVVVVHDELDIPFDTVKLKTGGGHGGHNGVRDVA 123
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G + R+R+GIGRP VL F + ER L +I + A ++ +L + V
Sbjct: 124 KALGTPEFPRVRVGIGRPVGRQDPADWVLDPFGATERQTLPILISDAADAVEMLVEEGLV 183
Query: 179 SFLNHIVSVR 188
+ + R
Sbjct: 184 AAQQRFHAPR 193
>gi|325270438|ref|ZP_08137042.1| aminoacyl-tRNA hydrolase [Prevotella multiformis DSM 16608]
gi|324987234|gb|EGC19213.1| aminoacyl-tRNA hydrolase [Prevotella multiformis DSM 16608]
Length = 209
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 64/188 (34%), Positives = 93/188 (49%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GFM +D ++ + + I+E + G + IL+KP
Sbjct: 23 YLICGLGNPGQEYEGTRHNTGFMVLDAFAKASNI-VFEDRRYGFIAETAVKGRKVILLKP 81
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + LV+ DD+ L G RLK G D GHNGL I +
Sbjct: 82 TTFMNLSGNAVRYWLNKEHIDQ-RRLLVVSDDVALPAGAFRLKGSGSDGGHNGLGHIQQL 140
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G +Y RLR+GIG I VLG+++ + L P +D + +
Sbjct: 141 IGSDYARLRMGIGNDYPRGGQIDWVLGHYTDEDLEALRPAVDTAVEIIRSFVLAGIDITM 200
Query: 182 NHIVSVRK 189
N + K
Sbjct: 201 NQFNKLGK 208
>gi|73666724|ref|YP_302740.1| peptidyl-tRNA hydrolase [Ehrlichia canis str. Jake]
gi|119390939|sp|Q3YT13|PTH_EHRCJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|72393865|gb|AAZ68142.1| peptidyl-tRNA hydrolase [Ehrlichia canis str. Jake]
Length = 193
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 81/190 (42%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 1 MF-IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
MF ++AGLGNPG +Y RHN GFM ID I FP +KKK +A IS G ++ R IL+
Sbjct: 1 MFHLLAGLGNPGTQYTLTRHNAGFMVIDAILDKFHFPNFKKKNNALISIGNIESYRVILV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG ++ +++ YK+P L+N +V HD++++DF T+R+K GG+AGHNGLKSI
Sbjct: 61 KPWTFMNNSGVPIMNIVSLYKIP-LDNMIVFHDEVEIDFCTIRVKKSGGNAGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
GK+Y R+R GIG P + + +VL +F + + I +I + LL ++ +
Sbjct: 120 NFLGKDYWRVRFGIGHPRNKMDLSDYVLSHFHN--LNAVNNTISSIVEHITLLLEKNHTT 177
Query: 180 FLNHIVSVRK 189
F + + + K
Sbjct: 178 FTDKVRNTLK 187
>gi|297624375|ref|YP_003705809.1| peptidyl-tRNA hydrolase [Truepera radiovictrix DSM 17093]
gi|297165555|gb|ADI15266.1| peptidyl-tRNA hydrolase [Truepera radiovictrix DSM 17093]
Length = 200
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 6/185 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y RHN GF+ +D + + H AW+K+ AE+ L+KP
Sbjct: 11 LIVGLGNPGPQYENTRHNAGFLVVDLLAARHGV-AWRKERQAEVGRW----GDVTLLKPL 65
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG ++ M +L E LV+HDDLDL G LRL+ GG G G++ +
Sbjct: 66 TFMNLSGAAVQAQMTKLRLSPAE-LLVVHDDLDLPLGRLRLRAGGSAGGQRGVQDTIYRL 124
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
G ++ RL++GI RPP + VL F ER + ++ + A ++ +L + + +
Sbjct: 125 GPDFTRLKVGISRPPAGWKVENWVLSRFREEERALVEAVVAHAADAVEVLLEAGLEAAMA 184
Query: 183 HIVSV 187
+
Sbjct: 185 RFNGL 189
>gi|302388385|ref|YP_003824207.1| peptidyl-tRNA hydrolase [Clostridium saccharolyticum WM1]
gi|302199013|gb|ADL06584.1| peptidyl-tRNA hydrolase [Clostridium saccharolyticum WM1]
Length = 188
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNP EY + RHN+GF +D + +KK A G++ + IL K
Sbjct: 1 MYIIAGLGNPTREYEKTRHNVGFEAVDILADKLGARVTEKKHRAFCGTGRIGPEKVILSK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ + +FYK+ ++ D++L G LR++T G GHNGLK+I
Sbjct: 61 PQTFMNLSGESIRAMADFYKVEPDHIIIICD-DINLAEGQLRIRTKGSAGGHNGLKNIIN 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+R+G+G P + +VLG F + + + A + ++ +
Sbjct: 120 HLGTQEFSRIRVGVGEKPKEMDLADYVLGRFPREQEGVMDQAYQDAAEAAIMMVTEGAEA 179
Query: 180 FLNHIVSVR 188
+N +
Sbjct: 180 AMNFFNRKK 188
>gi|284038040|ref|YP_003387970.1| peptidyl-tRNA hydrolase [Spirosoma linguale DSM 74]
gi|283817333|gb|ADB39171.1| peptidyl-tRNA hydrolase [Spirosoma linguale DSM 74]
Length = 186
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 95/186 (51%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G EY RHN GFM +DR+ + + F + A ++ Q G + +KP
Sbjct: 3 FLLVGLGNIGPEYALTRHNAGFMVLDRLAAQNDFSFSMTRL-AYTAKWQHKGKQLFFVKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M +P +EN L+I DD DL FG LRLK G GHNGLK+I +
Sbjct: 62 TTYMNLSGKAVSYYMKQENIP-IENILIITDDKDLPFGKLRLKPKGSPGGHNGLKNIDDI 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + Y RLR+GIG + VLG F E L +D +
Sbjct: 121 LGTQEYARLRVGIGNNFSKGRQVDFVLGQFPEDELIQLPDYLDRAGGAALSFCTMGIQMA 180
Query: 181 LNHIVS 186
+N+
Sbjct: 181 MNNYNQ 186
>gi|323142934|ref|ZP_08077644.1| aminoacyl-tRNA hydrolase [Succinatimonas hippei YIT 12066]
gi|322417287|gb|EFY07911.1| aminoacyl-tRNA hydrolase [Succinatimonas hippei YIT 12066]
Length = 197
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 69/191 (36%), Positives = 101/191 (52%), Gaps = 5/191 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILI 59
+ ++ GLGN G +Y RHN+G + I + + KF + G ++G L+
Sbjct: 7 LKLIVGLGNIGPKYEHTRHNMGCDLLFNIADKYRINLNPESKFSGLVGRGSIEGKEVRLV 66
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P TFMN SG+S+ + NF+++ E LV+HDDLDL GT+R K GGG AGHNGLKSI+
Sbjct: 67 FPTTFMNESGRSVGALCNFFRIAP-EEILVLHDDLDLPPGTIRFKFGGGLAGHNGLKSIT 125
Query: 120 EKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+NY RLRIGIG P + + +I VL + +R + +D + L K
Sbjct: 126 ACLSGAQNYYRLRIGIGHP-ERSDVINWVLNRPAPQDRDKIDAALDAALLGIGTLFKDGV 184
Query: 178 VSFLNHIVSVR 188
+ I +
Sbjct: 185 NKATSFINGFK 195
>gi|254482885|ref|ZP_05096122.1| peptidyl-tRNA hydrolase [marine gamma proteobacterium HTCC2148]
gi|214036966|gb|EEB77636.1| peptidyl-tRNA hydrolase [marine gamma proteobacterium HTCC2148]
Length = 195
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++AGLGNPG EY RHN G ++ + P + KF G LI
Sbjct: 5 KLIAGLGNPGSEYRGTRHNAGADFVEELARQCSTPLQAESKFFGLAGRVNYAGYDLRLII 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ + +FYK+ E L+ HD+LD+ GT R K GGG GHNGL+ I
Sbjct: 65 PTTFMNRSGKAVAAIASFYKIAP-EEILIAHDELDIPAGTARFKQGGGHGGHNGLRDIVP 123
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G KN+ RLRIGI P + + +VL S +R + ID +LPLL +
Sbjct: 124 ALGNNKNFHRLRIGIDHPGHASKVSGYVLSQPSQVDRTRIEACIDEAIAALPLLLSGDAT 183
Query: 179 SFLNHIVSV 187
+ + S
Sbjct: 184 KAMTRLHSF 192
>gi|323350834|ref|ZP_08086493.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis VMC66]
gi|322123008|gb|EFX94711.1| aminoacyl-tRNA hydrolase [Streptococcus sanguinis VMC66]
Length = 189
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 109/187 (58%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNP +Y E +HN+GFM +D+I K F A+I+ L+G + +K
Sbjct: 3 KLIVGLGNPREKYIETKHNVGFMLVDKICKDLDLKFTADKIFQADIASTFLNGEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ ++ +Y L ++E+ LVI+DDLD++ G +RL++ G GHNG+KSI +
Sbjct: 63 PTTFMNESGKAVQALLAYYGL-DIEDLLVIYDDLDMEVGKIRLRSKGSAGGHNGIKSIIK 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + +KR++IGIGRP + ++ HVLG F + +L +D + ++ +
Sbjct: 122 HIGSQEFKRIKIGIGRPKEGVTVVHHVLGKFDKDDYMTILNTLDKVDNAVNYYLQSGNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 QTMQKYN 188
>gi|300857301|ref|YP_003782285.1| peptidyl-tRNA hydrolase [Clostridium ljungdahlii DSM 13528]
gi|300437416|gb|ADK17183.1| peptidyl-tRNA hydrolase [Clostridium ljungdahlii DSM 13528]
Length = 191
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 107/189 (56%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGN G +Y RHNIGF +D I S + P ++KF EG + + +L+K
Sbjct: 1 MFLIVGLGNIGTKYQHTRHNIGFDAVDLISSKYNIPINREKFKGTYGEGIIADNKVMLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S++E NF+K+ + ++ D+DL+ G +R++ G GHNG+KS+
Sbjct: 61 PSTYMNLSGESVIEAANFFKIKSSNIIIIYD-DIDLEIGRIRIRKHGSAGGHNGIKSVIA 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R+++GIG+P ++ HVLG F ER + +++ A L L
Sbjct: 120 NLGTDVFPRIKVGIGQP--KGDLVSHVLGKFDINERNDIEKVLETSADVLECLINCGVEE 177
Query: 180 FLNHIVSVR 188
+N ++
Sbjct: 178 AMNKFNGLK 186
>gi|256848381|ref|ZP_05553824.1| peptidyl-tRNA hydrolase [Lactobacillus coleohominis 101-4-CHN]
gi|256714979|gb|EEU29957.1| peptidyl-tRNA hydrolase [Lactobacillus coleohominis 101-4-CHN]
Length = 187
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 6/189 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFH--AEISEGQLDGLRTIL 58
M ++ GLGN G Y E RHN GFM ++++ + A+K + A + G +DG + +L
Sbjct: 1 MKMIVGLGNVGTRYDETRHNTGFMVVEQLARDYHLGAFKHAKNIEAVVVSGMIDGQKVML 60
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP TFMN SG+++ +M++Y +P LE+ +V++DDLD+ G +RLKT G GHNGLKSI
Sbjct: 61 VKPTTFMNDSGRAVKPLMDYYDIP-LEDMVVVNDDLDMPVGKVRLKTHGKSGGHNGLKSI 119
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE- 176
G + + R+++GI P ++ HVLG FS ER + +L E
Sbjct: 120 IHYIGTDKFNRVKLGIDHPAH-GTVVSHVLGKFSKDERPQFNEAVITAEHALEDWVHGEN 178
Query: 177 DVSFLNHIV 185
+N
Sbjct: 179 FAELMNDYN 187
>gi|258654662|ref|YP_003203818.1| peptidyl-tRNA hydrolase [Nakamurella multipartita DSM 44233]
gi|258557887|gb|ACV80829.1| peptidyl-tRNA hydrolase [Nakamurella multipartita DSM 44233]
Length = 195
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 73/186 (39%), Positives = 108/186 (58%), Gaps = 2/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F+V GLGNPG +Y NRHN+G M D + K A++ EG+L R IL KP
Sbjct: 10 FLVVGLGNPGKQYAGNRHNVGAMVADVLAGRLGAGFKSHKAGADVVEGRLGARRVILAKP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+++MNLSG + + F+ + + +HD+LDL T+R+K GGG+ GHNGL+SIS
Sbjct: 70 RSYMNLSGGATAALAKFFSVVPA-RVIAVHDELDLPPSTIRVKQGGGEGGHNGLRSISAS 128
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G K+Y R+R GIGRPP VL +FS+ ER L +++ A ++ LL ++ +
Sbjct: 129 LGTKDYLRVRFGIGRPPGRMDPADFVLRDFSAAERKDLGVDLEHAADAVELLVEQGLEAT 188
Query: 181 LNHIVS 186
N + +
Sbjct: 189 QNQLHA 194
>gi|218187457|gb|EEC69884.1| hypothetical protein OsI_00266 [Oryza sativa Indica Group]
Length = 259
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG +Y RHN+GF +DRI + + + G + + +L+KP
Sbjct: 65 WLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKP 124
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q+++N SG+++ + +Y++P L + LV++D++ L G LRL+ GG HNGL+++ E
Sbjct: 125 QSYINYSGEAIGPLAAYYQVP-LRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVMEC 183
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ RL IGIG PP +L FSS E+ + ++ ++ L +
Sbjct: 184 LDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEEQLQIDTALEQGVDAVRTLVLKGFSG 243
Query: 180 FLNHIVSVRK 189
+ V+K
Sbjct: 244 SIERFNLVQK 253
>gi|229586948|ref|YP_002845449.1| peptidyl-tRNA hydrolase [Rickettsia africae ESF-5]
gi|259535236|sp|C3PP46|PTH_RICAE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|228021998|gb|ACP53706.1| Peptidyl-tRNA hydrolase [Rickettsia africae ESF-5]
Length = 185
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 84/186 (45%), Positives = 118/186 (63%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHN+GF+ I++I + + + KKKF+ EI+E DG + I I
Sbjct: 1 MLLVIGLGNPGKEYQYTRHNVGFIAIEKIANQYNSSFSTKKKFNCEIAETISDGQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + + VIHDD+DLD G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNIYPAK-IFVIHDDIDLDTGRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+RIG+GRP + + +VL +FS PE ++ ID I + L+ + +
Sbjct: 120 GVIGNNYNRIRIGVGRPQNNQDVADYVLNHFSKPEYETVMQAIDRITSNFGLILENKLEE 179
Query: 180 FLNHIV 185
F N I
Sbjct: 180 FKNKIA 185
>gi|115434354|ref|NP_001041935.1| Os01g0132800 [Oryza sativa Japonica Group]
gi|75288538|sp|Q5ZCL8|CRS2_ORYSJ RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic; AltName: Full=CRS2-like protein;
AltName: Full=Chloroplastic RNA splicing factor 2;
Flags: Precursor
gi|53792159|dbj|BAD52792.1| putative peptidyl-tRNA hydrolase [Oryza sativa Japonica Group]
gi|113531466|dbj|BAF03849.1| Os01g0132800 [Oryza sativa Japonica Group]
gi|215687059|dbj|BAG90905.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617682|gb|EEE53814.1| hypothetical protein OsJ_00257 [Oryza sativa Japonica Group]
Length = 259
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 101/190 (53%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG +Y RHN+GF +DRI + + + G + + +L+KP
Sbjct: 65 WLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKP 124
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q+++N SG+++ + +Y++P L + LV++D++ L G LRL+ GG HNGL+++ E
Sbjct: 125 QSYINYSGEAIGPLAAYYQVP-LRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVMEC 183
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ RL IGIG PP +L FSS ER + ++ ++ L +
Sbjct: 184 LDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEERLQIDTALEQGVDAVRTLVLKGFSG 243
Query: 180 FLNHIVSVRK 189
+ V+K
Sbjct: 244 SIERFNLVQK 253
>gi|260436438|ref|ZP_05790408.1| peptidyl-tRNA hydrolase [Synechococcus sp. WH 8109]
gi|260414312|gb|EEX07608.1| peptidyl-tRNA hydrolase [Synechococcus sp. WH 8109]
Length = 205
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 8/195 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILI 59
+ +V GLGNPG +Y RHNIGFM ++ + F + K H ++ + R L+
Sbjct: 5 LKLVVGLGNPGAKYAGTRHNIGFMALELLGERSGFSFRHQAKLHGLAADTGVGEQRLRLL 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
PQT+MN SG+++ ++++ L LV+ DD+DL G LRL+ G GHNGL+S
Sbjct: 65 MPQTYMNDSGRAIRAALDWFGLEPH-QLLVLVDDMDLPLGRLRLRAQGSAGGHNGLRSTI 123
Query: 120 EKCGKN-YKRLRIGIGRPPD-----TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
+ G + RLRIGIG P + A + HVLG+FS E+ + ++D + + L
Sbjct: 124 QHLGTQAFPRLRIGIGAPAENPAERRARTVSHVLGSFSKAEQPCVGAVLDAVLDGIQRLQ 183
Query: 174 KREDVSFLNHIVSVR 188
++ I R
Sbjct: 184 RQSFERAGTWINGFR 198
>gi|78211817|ref|YP_380596.1| peptidyl-tRNA hydrolase [Synechococcus sp. CC9605]
gi|119391029|sp|Q3AMZ1|PTH_SYNSC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78196276|gb|ABB34041.1| peptidyl-tRNA hydrolase [Synechococcus sp. CC9605]
Length = 205
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILI 59
+ +V GLGNPG +Y RHNIGFM ++ + F ++ K H ++ + R L+
Sbjct: 5 LKLVVGLGNPGAKYAGTRHNIGFMALELLGERSGFSFRQQAKLHGLAADTGVGEQRLRLL 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
PQT+MN SG+++ ++++ L LV+ DD+DL G LRL+ G GHNGL+S
Sbjct: 65 MPQTYMNDSGRAIRAALDWFGLEPH-QLLVLVDDMDLPLGRLRLRAQGSAGGHNGLRSTI 123
Query: 120 EKCGKN-YKRLRIGIGRPPD-----TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
+ G + RLRIGIG P + + HVLG FS E+ + ++D + + L
Sbjct: 124 QHLGTQAFPRLRIGIGAPAENPAERRVRTVSHVLGPFSKVEQPCVGAVLDAVLDGIQRLQ 183
Query: 174 KREDVSFLNHIVSVR 188
++ I R
Sbjct: 184 RQSFERAGTWINGFR 198
>gi|296169882|ref|ZP_06851494.1| aminoacyl-tRNA hydrolase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295895438|gb|EFG75140.1| aminoacyl-tRNA hydrolase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 191
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 75/187 (40%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG Y RHN+GFM D + K+ AE+ G+L G ++ K
Sbjct: 5 LLVVGLGNPGDNYARTRHNLGFMVADLLAGRLGSKFKVHKRSGAEVVSGRLAGHPVLVAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ +MN SG+ + + FY +P + +V+HDDLDLDFG +RLK GGG+ GHNGL+S++
Sbjct: 65 PRCYMNESGRQVGPLAKFYSVPPA-DIVVVHDDLDLDFGRIRLKIGGGEGGHNGLRSVAS 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K ++R+RIGIGRPP VL NFS+ ER + I + A + LL +
Sbjct: 124 ALGTKEFQRVRIGIGRPPGRKDPAAFVLENFSAAERGDVPTICEQAADATELLVELGLEP 183
Query: 180 FLNHIVS 186
N + +
Sbjct: 184 AQNRVHA 190
>gi|254821213|ref|ZP_05226214.1| peptidyl-tRNA hydrolase [Mycobacterium intracellulare ATCC 13950]
Length = 191
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 74/187 (39%), Positives = 106/187 (56%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHA-EISEGQLDGLRTILIK 60
+V GLGNPG Y RHN+GFM D + + K EI G+L G ++ K
Sbjct: 5 LLVVGLGNPGDNYARTRHNVGFMVADLLAARMGSKFKAHKRSGAEIVSGRLLGHSVVVAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ +MN SG+ + + FY + + +VIHDDLDLDFG +RLK GGG+ GHNGL+S++
Sbjct: 65 PRCYMNESGRQVGPLAKFYSVTPG-DIIVIHDDLDLDFGRIRLKIGGGEGGHNGLRSLAN 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K+++R+RIGIGRPP VL NF++ ER + I + A + LL +
Sbjct: 124 ALGSKDFQRVRIGIGRPPGRKDPAAFVLENFNAAERTEVPTICEQAADATELLIELGLEP 183
Query: 180 FLNHIVS 186
N + +
Sbjct: 184 AQNRVHA 190
>gi|302390886|ref|YP_003826706.1| peptidyl-tRNA hydrolase [Acetohalobium arabaticum DSM 5501]
gi|302202963|gb|ADL11641.1| peptidyl-tRNA hydrolase [Acetohalobium arabaticum DSM 5501]
Length = 185
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y RHNIGF ID K++ A G + IL K
Sbjct: 1 MKLVVGLGNPGFKYAATRHNIGFRVIDNFADKKQIKIEKEEQEALTGSLYFKGEKVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ +++N+Y + EN ++I+DDLDL+ G LR+K+ GG GHNG+KS+
Sbjct: 61 PQTYMNNSGRAVGKLVNWYDIAP-ENVIIIYDDLDLNTGHLRIKSSGGHGGHNGVKSVFN 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R++IGIGRPP+ + +VLG F ER + ++ ++ +
Sbjct: 120 HLGSTDISRIKIGIGRPPEYMTVPDYVLGKFDKEERDKAARAVREAVEAIGVILDQGIEQ 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNKYN 185
>gi|227501527|ref|ZP_03931576.1| peptidyl-tRNA hydrolase [Corynebacterium accolens ATCC 49725]
gi|227077552|gb|EEI15515.1| peptidyl-tRNA hydrolase [Corynebacterium accolens ATCC 49725]
Length = 177
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 68/173 (39%), Positives = 102/173 (58%), Gaps = 6/173 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y RHNIGF D + + KK + E++EG L G + I K
Sbjct: 4 LLVVGLGNPGPKYSGTRHNIGFDVADELAGELMSSFSVHKKTNTEVAEGMLSGRKVICAK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG + + ++ L + +V+HD+L+ DFGT++L+ GGGD GHNGL+S ++
Sbjct: 64 PRSFMNLSGGPIKALAQYFHLAPA-DIVVVHDELEFDFGTVKLRQGGGDHGHNGLRSTTK 122
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K+Y+RL IGIGRPP VL +S E+ + + A ++ +
Sbjct: 123 SLGTKDYQRLSIGIGRPPGRMDPASFVLKPWSKQEKVEIPIL---CADAVAEI 172
>gi|319891455|ref|YP_004148330.1| Peptidyl-tRNA hydrolase [Staphylococcus pseudintermedius HKU10-03]
gi|317161151|gb|ADV04694.1| Peptidyl-tRNA hydrolase [Staphylococcus pseudintermedius HKU10-03]
gi|323465375|gb|ADX77528.1| peptidyl-tRNA hydrolase [Staphylococcus pseudintermedius ED99]
Length = 190
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G +Y RHNIGF ID + H K+KF + +++G + +LI+
Sbjct: 1 MKCIVGLGNIGKKYEYTRHNIGFEVIDHLLDRHQIKLDKQKFRGAYTIERINGEKVMLIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + + ++ DLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PLTLMNLSGEAVAPLMDYYDVEVDDLLVLYD-DLDLAQGHVRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA-KREDV 178
G ++KR+RIGI RP + + +VL FS+ E + +I ++A ++ +
Sbjct: 120 MLGTSDFKRIRIGIDRPSNGMAVKDYVLQRFSTNEMKVMDTVIQHVADAVEAFIGNEKFE 179
Query: 179 SFLNHIV 185
+ +N
Sbjct: 180 NVMNRYN 186
>gi|86130925|ref|ZP_01049524.1| Peptidyl-tRNA hydrolase [Dokdonia donghaensis MED134]
gi|85818336|gb|EAQ39496.1| Peptidyl-tRNA hydrolase [Dokdonia donghaensis MED134]
Length = 209
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G +Y RHNIGF +D +K +I+ ++ G IL+KP
Sbjct: 25 FLIVGLGNIGPKYENTRHNIGFKVVDAFAKAQETTFETEKL-GDIARTRVKGKTVILLKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + K+P +EN LVI DDL+L+FGT+R+KT G D GHNGLK +
Sbjct: 84 NTFMNLSGKAIRYWLQQEKVP-VENLLVITDDLNLEFGTIRVKTKGSDGGHNGLKDTQAQ 142
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y R R GI + +VLG ++ E L +D + + K +
Sbjct: 143 LNTTKYNRFRFGISDQFSKGRQVDYVLGEWTPDENAALPERLDKASEVIASFVKAGINNT 202
Query: 181 LNHIV 185
+N
Sbjct: 203 MNAYN 207
>gi|313672205|ref|YP_004050316.1| peptidyl-tRNA hydrolase [Calditerrivibrio nitroreducens DSM 19672]
gi|312938961|gb|ADR18153.1| peptidyl-tRNA hydrolase [Calditerrivibrio nitroreducens DSM 19672]
Length = 199
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 66/182 (36%), Positives = 106/182 (58%), Gaps = 4/182 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++VAGLGNPG Y RHNIGFM +D + +K F A+ + + G R ++KP
Sbjct: 4 WLVAGLGNPGDRYRFTRHNIGFMVVDMMADRFNLS-FKGGFEADYAVADIFGKRCYIVKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S+ E+ ++ +P EN +V+HDDLDL FG +++K GG GHNG+ SI
Sbjct: 63 QTYMNLSGKSISEISKYFDIPK-ENIIVVHDDLDLSFGRIKIKVGGSSGGHNGINSIIAC 121
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
++ R+++GI +P + VL FS+ E+ FL ++ + + +++
Sbjct: 122 LSSSDFTRVKMGIDKPKSK-DVSGFVLSEFSAEEKKFLHDFVELGCNATIAILEKDVRYA 180
Query: 181 LN 182
+N
Sbjct: 181 MN 182
>gi|255692809|ref|ZP_05416484.1| aminoacyl-tRNA hydrolase [Bacteroides finegoldii DSM 17565]
gi|260621438|gb|EEX44309.1| aminoacyl-tRNA hydrolase [Bacteroides finegoldii DSM 17565]
Length = 189
Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM +D + + P + + + + G + IL+KP
Sbjct: 4 YLIVGLGNIGPEYHETRHNIGFMTVDSLAKTNSAPPFIDGRYGFTTNFTIKGRQLILLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 64 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG I +VLG+F+ + + ++ +
Sbjct: 123 LGTQNYARLRFGIGNDFPRGGQIDYVLGHFTDEDWKTMNERLETAGEIIKSFCLAGIDIT 182
Query: 181 LNHIV 185
+N
Sbjct: 183 MNQFN 187
>gi|168704118|ref|ZP_02736395.1| peptidyl-tRNA hydrolase [Gemmata obscuriglobus UQM 2246]
Length = 213
Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 110/186 (59%), Gaps = 3/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF ID + + + +++F A ISE + +L+K
Sbjct: 1 MKVIVGLGNPGPKYAGTRHNVGFDVIDYLANGPGVGSARERFEALISETKEGDETVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ +++FYK+P +EN LVI DDL+L G LR++ G G NGL++I E
Sbjct: 61 PLTFMNLSGRAVRAILDFYKVP-VENVLVICDDLNLPLGKLRMRIKGSHGGQNGLRNIQE 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + Y RLR+G+G+P + VLG F ER I A++ + AK+ +
Sbjct: 120 QLGTDAYCRLRVGLGQPAV-GDAVDFVLGKFKPGERAAAEEAIATAAQAALVWAKQGAEA 178
Query: 180 FLNHIV 185
+N
Sbjct: 179 SMNRFN 184
>gi|90414101|ref|ZP_01222084.1| peptidyl-tRNA hydrolase [Photobacterium profundum 3TCK]
gi|90324896|gb|EAS41424.1| peptidyl-tRNA hydrolase [Photobacterium profundum 3TCK]
Length = 196
Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats.
Identities = 62/189 (32%), Positives = 92/189 (48%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY + RHN G + + H + K+ +G L+ P
Sbjct: 7 LLVGLANPGAEYAKTRHNAGAWVVQELARVHNVTLREESKYFGVTGRITTNGQDLRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ + NF+++ E L+ HD+LDL G + K GGG GHNGL+ K
Sbjct: 67 TTYMNLSGKSVAALANFFQIKP-EEILIAHDELDLPPGVAKFKKGGGHGGHNGLRDTISK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + RLR+GIG P D + VLG E+ + +D R + +L
Sbjct: 126 MGNNKEFYRLRVGIGHPGDKNKVANFVLGKAPVKEQECIDAAVDEAVRCMDILLNDGLNK 185
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 186 AQNRLHSFK 194
>gi|78189056|ref|YP_379394.1| peptidyl-tRNA hydrolase [Chlorobium chlorochromatii CaD3]
gi|78171255|gb|ABB28351.1| peptidyl-tRNA hydrolase [Chlorobium chlorochromatii CaD3]
Length = 217
Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 97/190 (51%), Gaps = 3/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGF D + + H K+K ++ +L +IK
Sbjct: 28 MKLIIGLGNPGTEYDGTRHNIGFAVADALAAHHNASFSKEKGRYLSAKIKLGSESVGIIK 87
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG +++ MNFYK+ E +VI DDL+L GT+RL+ G G NGLK I E
Sbjct: 88 PMTYMNHSGHAVVAAMNFYKVARTE-IVVICDDLNLPVGTMRLRPKGSAGGQNGLKHIIE 146
Query: 121 KCGKN-YKRLRIGIG-RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N + RLRIGIG + VLG FS E+ + + + A
Sbjct: 147 CFGSNEFARLRIGIGSQNMPKGGFSSFVLGKFSEQEKSEIAIMTVSARDCAIDFALHGLG 206
Query: 179 SFLNHIVSVR 188
+NH + +
Sbjct: 207 HAMNHFNTSK 216
>gi|306835688|ref|ZP_07468694.1| aminoacyl-tRNA hydrolase [Corynebacterium accolens ATCC 49726]
gi|304568406|gb|EFM43965.1| aminoacyl-tRNA hydrolase [Corynebacterium accolens ATCC 49726]
Length = 177
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 69/173 (39%), Positives = 103/173 (59%), Gaps = 6/173 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y RHNIGF D + + KK + E++EG L G + I K
Sbjct: 4 LLVVGLGNPGPKYSGTRHNIGFDVADELAGELMSSFSVHKKTNTEVAEGMLSGRKVICAK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG + + ++ L + +V+HD+L+LDFGT++L+ GGGD GHNGL+S ++
Sbjct: 64 PRSFMNLSGGPIKALAQYFHLTPA-DIVVVHDELELDFGTVKLRQGGGDHGHNGLRSTTK 122
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K+Y+RL IGIGRPP VL +S E+ + + A ++ +
Sbjct: 123 SLGTKDYQRLSIGIGRPPGRMDPASFVLKPWSKQEKVEIPIL---CADAVAEI 172
>gi|218885593|ref|YP_002434914.1| peptidyl-tRNA hydrolase [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|226723248|sp|B8DKL7|PTH_DESVM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|218756547|gb|ACL07446.1| Aminoacyl-tRNA hydrolase [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 202
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 69/184 (37%), Positives = 105/184 (57%), Gaps = 11/184 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI----HSFHFF-----PAWKKKFHAEISEGQLDG 53
++ GLGNPG EY RHN+GFM +D + KKK+ G
Sbjct: 6 LIVGLGNPGKEYERTRHNLGFMAVDALMEAAARETGGGCDQLSGGKKKYDLWRCRITPTG 65
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
++ KPQTFMNLSG+++L + ++Y++ + LV+HD+LD+ G ++ KTGGG+AGHN
Sbjct: 66 DPWLVAKPQTFMNLSGEAVLAIASYYRIKP-DAILVVHDELDIPLGRMKFKTGGGNAGHN 124
Query: 114 GLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GLKSI++ G ++ RLR+GIGR P VLG S PE+ L ++ +++ +
Sbjct: 125 GLKSITQLLGTPDFHRLRLGIGRSPHGGETTNWVLGRLSGPEQTLLDTLLPAAVQAMTIF 184
Query: 173 AKRE 176
A +
Sbjct: 185 ASQG 188
>gi|193214407|ref|YP_001995606.1| peptidyl-tRNA hydrolase [Chloroherpeton thalassium ATCC 35110]
gi|193087884|gb|ACF13159.1| Aminoacyl-tRNA hydrolase [Chloroherpeton thalassium ATCC 35110]
Length = 202
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 60/185 (32%), Positives = 93/185 (50%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHNIGF +D + + K + + + G +L+KP
Sbjct: 12 KLIVGLGNPGSKYDGTRHNIGFEVVDALAARFGEDFRSGKGEYDFCKTKHRGEEVLLVKP 71
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M FYK+ L + LVI DD +L G +R++ G D G NGLK+I +
Sbjct: 72 TTYMNLSGKAVRHAMAFYKISIL-DILVICDDFNLPLGAVRIRPSGTDGGQNGLKNIIQL 130
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+ ++ RLR+GIG P + VLG F E + A + + +
Sbjct: 131 VGRNDFARLRVGIGAP-KVQNASSFVLGKFGESELPIVEETARFCADAACSFLETDLSKT 189
Query: 181 LNHIV 185
+
Sbjct: 190 MTKFN 194
>gi|325298381|ref|YP_004258298.1| Peptidyl-tRNA hydrolase [Bacteroides salanitronis DSM 18170]
gi|324317934|gb|ADY35825.1| Peptidyl-tRNA hydrolase [Bacteroides salanitronis DSM 18170]
Length = 187
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 98/186 (52%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM +D + +K + + + G + IL+KP
Sbjct: 3 YLIVGLGNIGDEYHETRHNIGFMVLDALAKASNI-VFKDGRYGATASLSIKGRQLILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M K+P LEN L++ DDL L G+LRLK G DAGHNGLK I+
Sbjct: 62 STYMNLSGNAVRYWMQQEKIP-LENVLIVVDDLALPLGSLRLKGKGSDAGHNGLKHIAST 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG I +VLG+F E+ L I +
Sbjct: 121 LGTQNYARLRFGIGNNFPKGGQIDYVLGHFDEEEQKALPERIAIAEEIIKSFCLAGLNIT 180
Query: 181 LNHIVS 186
+N +
Sbjct: 181 MNQFNN 186
>gi|189346690|ref|YP_001943219.1| peptidyl-tRNA hydrolase [Chlorobium limicola DSM 245]
gi|238692149|sp|B3ECG5|PTH_CHLL2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189340837|gb|ACD90240.1| Aminoacyl-tRNA hydrolase [Chlorobium limicola DSM 245]
Length = 190
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 95/187 (50%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNP +Y RHN+GF IDR+ P K ++ +L+K
Sbjct: 1 MKLVIGLGNPESKYSGTRHNVGFDVIDRLSESFQIPFTAGKGKYHFAKINWRNTAIVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG +++ MNFYK+ ++ LVI DDL+L GTLRL+ G G NGLK I E
Sbjct: 61 PMTYMNLSGHAVVAAMNFYKI-QRQDILVICDDLNLPSGTLRLRAKGSAGGQNGLKHIIE 119
Query: 121 KCGKN-YKRLRIGIG-RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G + + R+R+GI + VLG FS E+ + I+ A + +
Sbjct: 120 CLGNDEFARMRVGIRLEDQPLSSFSSFVLGKFSEDEKKTMEKILPVCADAALDFSVNGIE 179
Query: 179 SFLNHIV 185
+NH
Sbjct: 180 HAMNHYN 186
>gi|311740786|ref|ZP_07714613.1| aminoacyl-tRNA hydrolase [Corynebacterium pseudogenitalium ATCC
33035]
gi|311304306|gb|EFQ80382.1| aminoacyl-tRNA hydrolase [Corynebacterium pseudogenitalium ATCC
33035]
Length = 197
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 67/175 (38%), Positives = 104/175 (59%), Gaps = 6/175 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y RHNIGF D + + KK + E++EG G + I K
Sbjct: 25 LLVVGLGNPGPKYAGTRHNIGFDVADELAGEIMSSFSVHKKTNTEVAEGMAGGRKIICAK 84
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG + + ++ L + + +V+HD+L+LDFGT++L+ GGGD GHNGL+S ++
Sbjct: 85 PRSFMNLSGGPIKALSQYFHL-SPTDIIVVHDELELDFGTVKLRKGGGDHGHNGLRSTTK 143
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K+Y+RL IGIGRPP VL ++ E+ + + A ++ + +
Sbjct: 144 SLGTKDYQRLSIGIGRPPGRMDPASFVLKPWAKQEKAEIPIL---CADAVEEILR 195
>gi|302763245|ref|XP_002965044.1| hypothetical protein SELMODRAFT_37138 [Selaginella moellendorffii]
gi|300167277|gb|EFJ33882.1| hypothetical protein SELMODRAFT_37138 [Selaginella moellendorffii]
Length = 177
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 63/178 (35%), Positives = 102/178 (57%), Gaps = 3/178 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG ++ RHN+GF ID + + A + +G ++G+ +L+KP
Sbjct: 1 WMIVGLGNPGSKFVGTRHNVGFEAIDLLALQENIKLNTIQCKALVGKGMIEGVPVLLVKP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG ++ + +Y++ +N LVIHDD+DLD +++ GG GHNG+++I E+
Sbjct: 61 QTYMNLSGDAVSPLALYYRVKP-DNILVIHDDMDLDVAAMKMVPKGGPGGHNGMRNIIER 119
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
KN RLRIGIGRPP +VL F+ E+ + + A ++ L+
Sbjct: 120 FKDNKNIPRLRIGIGRPPGAMDPKAYVLQKFTQREKVEIDVCYERGADAVRLIMSDGF 177
>gi|304321413|ref|YP_003855056.1| peptidyl-tRNA hydrolase [Parvularcula bermudensis HTCC2503]
gi|303300315|gb|ADM09914.1| peptidyl-tRNA hydrolase [Parvularcula bermudensis HTCC2503]
Length = 231
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 77/190 (40%), Positives = 120/190 (63%), Gaps = 5/190 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +NRHN GF ++ IH H F + KF ++EG++ R ++
Sbjct: 1 MILLIGLGNPGAQYAQNRHNAGFHAVEEIHGAHDFGPERSKFRGALAEGRVGSCRAFTLR 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+ N SG ++L FYK+P L++ +V HD++DL G +R+K GGG AG+NGL+SI+
Sbjct: 61 PDTYYNDSGTAVLAASQFYKIP-LDDIIVFHDEIDLAPGKVRVKKGGGLAGNNGLRSIAA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER-YFLLPIIDNIARSLPLLAKREDV- 178
G ++ R+RIGIG P ++ +VLGNFS ER + +++ +ARSLPLL R++
Sbjct: 120 HLGPDFWRVRIGIGHPGHKDKVMPYVLGNFSKAERTDYYDDLLERMARSLPLLMPRDEAA 179
Query: 179 --SFLNHIVS 186
F + ++
Sbjct: 180 VGRFQSAVMQ 189
>gi|293370793|ref|ZP_06617339.1| aminoacyl-tRNA hydrolase [Bacteroides ovatus SD CMC 3f]
gi|292634153|gb|EFF52696.1| aminoacyl-tRNA hydrolase [Bacteroides ovatus SD CMC 3f]
Length = 219
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 70/185 (37%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 34 YLVVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFMDGRYGFTTSFSIKGRQLILLKP 93
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 94 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAI 152
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG + +VLG+F+ + + ++ +
Sbjct: 153 LGTQNYARLRFGIGNDFPRGGQVDYVLGHFTDEDWKTMDERLEMAGEIIKSFCLTGIDIT 212
Query: 181 LNHIV 185
+N
Sbjct: 213 MNQFN 217
>gi|224475644|ref|YP_002633250.1| peptidyl-tRNA hydrolase [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254783887|sp|B9DLD9|PTH_STACT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|222420251|emb|CAL27065.1| pth [Staphylococcus carnosus subsp. carnosus TM300]
Length = 190
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G + + +HNIGF ID + + F K+KF + +L G + +LI+
Sbjct: 1 MKCIVGLGNIGKRFEQTKHNIGFEVIDYLLESNQFKLDKQKFRGAYTIERLGGEKVLLIE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ +M++Y + + E+ LV++DDLDL G +RL+ G GHNG+KSI +
Sbjct: 61 PMTMMNLSGEAVGPLMDYYNV-DPEDLLVLYDDLDLPQGQVRLRQKGSAGGHNGMKSIIQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDV 178
G + +KR+RIGIGRP + + +VL FS E + +I++ A ++
Sbjct: 120 HLGTDNFKRIRIGIGRPTNGMSVPDYVLQKFSKQEMETMNKVIEHSAHAVEDYVSNSRFD 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 HVMNEYN 186
>gi|258544624|ref|ZP_05704858.1| aminoacyl-tRNA hydrolase [Cardiobacterium hominis ATCC 15826]
gi|258520132|gb|EEV88991.1| aminoacyl-tRNA hydrolase [Cardiobacterium hominis ATCC 15826]
Length = 190
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG Y + RHN GF +D++ + A KKF E + L L+K
Sbjct: 3 KLIVGLGNPGARYQKTRHNAGFWLLDQLAAAEGGRLAEDKKFQGEYGKIALAYQPVHLLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ + FY L E LV+HD+LDL G ++LK GGG GHNGL+ I
Sbjct: 63 PLTFMNASGRAVSALAKFYDLAP-EEILVVHDELDLQEGAVKLKYGGGHGGHNGLRDIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLR+GI P D ++ +VL E+ + I LP+L +
Sbjct: 122 ALGSKDFYRLRLGINHPGDRNQVVDYVLHPPGKAEQEKIDDAIARGLAILPVLVRDGAEK 181
Query: 180 FLNHIVS 186
++ + +
Sbjct: 182 AMHRLHT 188
>gi|297805938|ref|XP_002870853.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316689|gb|EFH47112.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 241
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHNIGF ID I + A + G + + +L+KP
Sbjct: 47 WLIVGLGNPGFKYYGTRHNIGFEMIDHIARATEISMNTIQSKALVGIGSVGEVPILLVKP 106
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q +MN SG+S+ + +Y++P L + L+I+DD+ L G LRL+ GG + HNGLK+++E
Sbjct: 107 QAYMNFSGESVGPLAAYYQIP-LRHILMIYDDMGLPNGVLRLQPKGGHSQHNGLKNVTEH 165
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ Y RL IGIG PP + +L FS ER + ++ + L +
Sbjct: 166 LNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQIDAGLEQGVEGVKTLVEEGFSD 225
Query: 180 FLNHIVSVRK 189
++ +K
Sbjct: 226 SISRFNLGQK 235
>gi|255325404|ref|ZP_05366508.1| aminoacyl-tRNA hydrolase [Corynebacterium tuberculostearicum SK141]
gi|255297490|gb|EET76803.1| aminoacyl-tRNA hydrolase [Corynebacterium tuberculostearicum SK141]
Length = 197
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 66/175 (37%), Positives = 104/175 (59%), Gaps = 6/175 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y RHNIGF D + + KK + E++EG G + I K
Sbjct: 25 LLVVGLGNPGPKYAGTRHNIGFDVADELAGELMSGFSVHKKTNTEVAEGMAGGRKIICAK 84
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG + + ++ L + + +V+HD+L+LDFGT++L+ GGGD GHNGL+S ++
Sbjct: 85 PRSFMNLSGGPIKALAQYFHL-SAADIIVVHDELELDFGTIKLRQGGGDHGHNGLRSTTK 143
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K+Y+RL +GIGRPP VL ++ E+ + + A ++ + +
Sbjct: 144 SLGTKDYQRLSVGIGRPPGRMDPASFVLKPWAKQEKAEIPIL---CADAVEEILR 195
>gi|90022898|ref|YP_528725.1| peptidyl-tRNA hydrolase [Saccharophagus degradans 2-40]
gi|119391000|sp|Q21FL6|PTH_SACD2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|89952498|gb|ABD82513.1| peptidyl-tRNA hydrolase [Saccharophagus degradans 2-40]
Length = 197
Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 96/187 (51%), Gaps = 4/187 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG+EY RHN G ++ + P KF S ++G L+ P
Sbjct: 10 LIVGLGNPGNEYEHTRHNAGQDFVEELARDLGQPLSPTPKFFGHFSRLNINGKDVRLLVP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ V FYK+P E LV+HD+LDL G RLK GGG GHNGL+ I
Sbjct: 70 TTYMNRSGQAVAAVCQFYKIPP-EAVLVVHDELDLPPGKARLKIGGGHGGHNGLRDIISS 128
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLR+GIG P + + +VL S E + I + LAK +
Sbjct: 129 LGNNKDFGRLRLGIGHPGNAKLVSNYVLKKAPSEEFNAIEDAIRAAQPHVADLAKGDWEK 188
Query: 180 FLNHIVS 186
+ + S
Sbjct: 189 AMRELHS 195
>gi|170691506|ref|ZP_02882671.1| Aminoacyl-tRNA hydrolase [Burkholderia graminis C4D1M]
gi|170143711|gb|EDT11874.1| Aminoacyl-tRNA hydrolase [Burkholderia graminis C4D1M]
Length = 200
Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 13/196 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN GF +D++ +++FH ++ +L G L++
Sbjct: 3 KLIVGLGNPGAEYTATRHNAGFWLVDQLARDAGTTLRDERRFHGFYAKARLHGEEVHLLE 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SGQS++ V F+K+ E LV HD+LD+ G+++LK GGG GHNGLK I+
Sbjct: 63 PQTYMNRSGQSVVAVAQFFKILPDE-ILVAHDELDMPPGSVKLKLGGGSGGHNGLKDITA 121
Query: 121 KC-GKNYKRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ Y RLRIGIG P + +VL E+ + ++ +
Sbjct: 122 HLSSQQYWRLRIGIGHPRDLIPESARAGAKPDVANYVLKPPRREEQDAIDAAMERGLAVM 181
Query: 170 PLLAKREDVSFLNHIV 185
+ K E + +
Sbjct: 182 LQIIKGELERAMMQLH 197
>gi|152965022|ref|YP_001360806.1| aminoacyl-tRNA hydrolase [Kineococcus radiotolerans SRS30216]
gi|189038154|sp|A6W6V3|PTH_KINRD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|151359539|gb|ABS02542.1| Aminoacyl-tRNA hydrolase [Kineococcus radiotolerans SRS30216]
Length = 198
Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 111/193 (57%), Gaps = 9/193 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD-------GL 54
++V GLGNPG EY RHN+G M +D + S + + A +E +L G
Sbjct: 5 WLVVGLGNPGAEYERTRHNVGQMVLDELASRTRGSFKRHRTGARTAEVRLGVAPGGAPGP 64
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L P ++MN+SG + + ++ + ++E+ +V+HD+LD+ FG++RLK GGG+ GHNG
Sbjct: 65 RVVLAAPTSYMNVSGGPVAGLAKYFDV-DVEHLVVVHDELDVPFGSVRLKRGGGEGGHNG 123
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
L+SIS+ G K+Y R+R+GIGRPP VL FSS E+ + ++ + A ++ L
Sbjct: 124 LRSISKSLGDKDYARVRVGIGRPPGRQDPADFVLKEFSSTEKKDMPFLVMDAADAVEELV 183
Query: 174 KREDVSFLNHIVS 186
+ + +
Sbjct: 184 IKGFEAAQQKFHA 196
>gi|253999719|ref|YP_003051782.1| peptidyl-tRNA hydrolase [Methylovorus sp. SIP3-4]
gi|313201767|ref|YP_004040425.1| peptidyl-tRNA hydrolase [Methylovorus sp. MP688]
gi|253986398|gb|ACT51255.1| peptidyl-tRNA hydrolase [Methylovorus sp. SIP3-4]
gi|312441083|gb|ADQ85189.1| peptidyl-tRNA hydrolase [Methylovorus sp. MP688]
Length = 195
Score = 214 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 101/190 (53%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG EY + RHN GF IDR+ + A + KFH + + G L+K
Sbjct: 5 KLFVGLGNPGSEYEDTRHNAGFWWIDRVAALSGSKLANEAKFHGLAGKLKHSGTEAWLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ + FYK+ E LVIHD+LD+ G +++K GGG GHNGLK I+
Sbjct: 65 PTTFMNASGRSVGALAKFYKIEPHE-ILVIHDELDIPPGQVKMKKGGGHGGHNGLKDIAA 123
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + RLR+GIG P + A ++ VL + E + I++ L L
Sbjct: 124 HLGTNEFWRLRLGIGHPGERAAVVNFVLHAPAKAEMSLIETTIEDSVALLDQLLAGSFEQ 183
Query: 180 FLNHIVSVRK 189
+ + + K
Sbjct: 184 AMLKLHTKPK 193
>gi|40889731|pdb|1RYM|A Chain A, Structure Of The Group Ii Intron Splicing Factor Crs2
Length = 212
Score = 214 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 103/190 (54%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG++Y RHN+GF +DRI + ++ + + G + + +++KP
Sbjct: 18 WLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTEQSKSLLGIGSIGEVPVLVVKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q++MN SG+++ + +Y++P L + L+I+DD L G LRL+ GG HNGL+++ E
Sbjct: 78 QSYMNYSGEAIGPLAAYYQVP-LRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEH 136
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RL IGIG PP +L FSS ER + ++ ++ L +
Sbjct: 137 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSG 196
Query: 180 FLNHIVSVRK 189
V+K
Sbjct: 197 STERFNLVQK 206
>gi|311113112|ref|YP_003984334.1| aminoacyl-tRNA hydrolase [Rothia dentocariosa ATCC 17931]
gi|310944606|gb|ADP40900.1| aminoacyl-tRNA hydrolase [Rothia dentocariosa ATCC 17931]
Length = 194
Score = 214 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 109/190 (57%), Gaps = 5/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQL--DGLRTIL 58
+++ GLGNPG +Y + RHNIG M +D+I K K A + EG+L G + +L
Sbjct: 5 WLIVGLGNPGPQYAKTRHNIGQMVLDKIAREMGSTFKKHSKASAVVVEGRLGMGGPKVVL 64
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+K +MN SG + V FY + + ++ +V+HD+LD+ F T++LK GGG+ GHNGL+ I
Sbjct: 65 MKSLGYMNTSGGPVSAVAKFYGI-DPDHIIVVHDELDIPFDTIKLKIGGGEGGHNGLRDI 123
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
++ G K+Y R+R GIGRPP + +VL F++ E L +IDN ++ +L
Sbjct: 124 TKALGTKDYYRVRAGIGRPPGRMNTADYVLKPFTAAEVKDLPFLIDNSVDAVAMLITDGL 183
Query: 178 VSFLNHIVSV 187
+ S
Sbjct: 184 TAAQQRFHSA 193
>gi|104780083|ref|YP_606581.1| peptidyl-tRNA hydrolase [Pseudomonas entomophila L48]
gi|123255952|sp|Q1IEY8|PTH_PSEE4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|95109070|emb|CAK13766.1| peptidyl-tRNA hydrolase [Pseudomonas entomophila L48]
Length = 194
Score = 214 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 96/186 (51%), Gaps = 4/186 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++R+ S KK+ ++ G L+ P
Sbjct: 6 LIVGLGNPGPEYEQTRHNAGALFVERLASAQRVSLTADKKYFGLTAKFSHQGNDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + NF+++ E LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALANFFRIKP-EAILVAHDELDLPPGVAKLKRGGGHGGHNGLRDIIAQ 124
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ RLR+GIG P D + VLG E+ L ID +P + +
Sbjct: 125 LGNQNDFHRLRLGIGHPGDAKLVSNFVLGRAPRAEQEKLDASIDFALGVMPDVLAGDFAK 184
Query: 180 FLNHIV 185
+ +
Sbjct: 185 AMRELH 190
>gi|294644677|ref|ZP_06722427.1| aminoacyl-tRNA hydrolase [Bacteroides ovatus SD CC 2a]
gi|294809062|ref|ZP_06767784.1| aminoacyl-tRNA hydrolase [Bacteroides xylanisolvens SD CC 1b]
gi|298482670|ref|ZP_07000854.1| aminoacyl-tRNA hydrolase [Bacteroides sp. D22]
gi|292640011|gb|EFF58279.1| aminoacyl-tRNA hydrolase [Bacteroides ovatus SD CC 2a]
gi|294443787|gb|EFG12532.1| aminoacyl-tRNA hydrolase [Bacteroides xylanisolvens SD CC 1b]
gi|295087141|emb|CBK68664.1| peptidyl-tRNA hydrolase [Bacteroides xylanisolvens XB1A]
gi|298271133|gb|EFI12710.1| aminoacyl-tRNA hydrolase [Bacteroides sp. D22]
Length = 219
Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats.
Identities = 70/185 (37%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 34 YLVVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFMDGRYGFTTSFSIKGRQLILLKP 93
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 94 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAI 152
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG + +VLG+F+ + + ++ +
Sbjct: 153 LGTQNYARLRFGIGNDFPRGGQVDYVLGHFTDEDWKTMDERLEMAGEIIKSFCLAGIDIT 212
Query: 181 LNHIV 185
+N
Sbjct: 213 MNQFN 217
>gi|283458588|ref|YP_003363221.1| peptidyl-tRNA hydrolase [Rothia mucilaginosa DY-18]
gi|283134636|dbj|BAI65401.1| peptidyl-tRNA hydrolase [Rothia mucilaginosa DY-18]
Length = 195
Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats.
Identities = 71/188 (37%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQ--LDGLRTIL 58
+++ GLGNPG EY + RHNIG M +D + K + A++ EG+ + G + +L
Sbjct: 5 WLIVGLGNPGPEYEKTRHNIGQMVVDELAREVGGGFKKHGRARAQVLEGRLGIGGPKVVL 64
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
KP T+MN SG + + FY + N + + +HD+LD+ F T++LK GGG+ GHNGL+ I
Sbjct: 65 AKPLTYMNTSGGPVSALAQFYDI-NPDRIIAVHDELDIPFDTIKLKIGGGEGGHNGLRDI 123
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
++ G K+Y R+R GIGRPP VL FSS E L +I N A + +L K
Sbjct: 124 TKALGTKDYYRVRTGIGRPPGRMDTADFVLKPFSSTEAKDLPFLISNAADATMMLVKEGL 183
Query: 178 VSFLNHIV 185
++
Sbjct: 184 LATQQRYH 191
>gi|325268128|ref|ZP_08134774.1| aminoacyl-tRNA hydrolase [Kingella denitrificans ATCC 33394]
gi|324980513|gb|EGC16179.1| aminoacyl-tRNA hydrolase [Kingella denitrificans ATCC 33394]
Length = 192
Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 101/187 (54%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNP EY RHN GF +D + + +KKF +++ L+K
Sbjct: 4 KLIVGLGNPTAEYEHTRHNAGFWFLDELAWQWKATFKNEKKFFGDVARVARPEGDVWLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+++ + NFYK+ E LV+HD+LD+D G +R K GGG+ GHNGLK I
Sbjct: 64 PDTYMNLSGKAVQALANFYKI-QPEEILVVHDELDIDCGAIRFKLGGGNGGHNGLKDIQA 122
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K G + RLR+GIG P D ++ VL S+ ER + I R++ +
Sbjct: 123 KLGTPQFYRLRLGIGHPGDKHLVVGFVLNKPSAAERELIDRAIAKSLRAMDDVMAGRQED 182
Query: 180 FLNHIVS 186
+ ++ S
Sbjct: 183 VVRYLHS 189
>gi|77919598|ref|YP_357413.1| peptidyl-tRNA hydrolase [Pelobacter carbinolicus DSM 2380]
gi|119390973|sp|Q3A314|PTH_PELCD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|77545681|gb|ABA89243.1| peptidyl-tRNA hydrolase [Pelobacter carbinolicus DSM 2380]
Length = 191
Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 113/187 (60%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG EY RHNIGF+ + ++ + + G+ DG T+++
Sbjct: 1 MKLVVGLGNPGPEYAATRHNIGFLVAQKFAQQMGVSLKRQAYQGIVGTGRADGQETMVLL 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG S++ + +E+ +VIHD++DL FG++R+K GGG GHNGL+SI +
Sbjct: 61 PQTYMNRSGVSVVSACKSKGIA-VEDVVVIHDEIDLPFGSIRIKVGGGHGGHNGLRSIVD 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ R+R+G+GRP + ++VLG FSS E+ L +++N ++L +L ++
Sbjct: 120 LLGCRDFLRVRMGVGRPQGQVDVAKYVLGQFSSTEKSQLDNVLENSVKALEVLLQKGAQQ 179
Query: 180 FLNHIVS 186
+N +
Sbjct: 180 AMNEFNN 186
>gi|300743864|ref|ZP_07072884.1| aminoacyl-tRNA hydrolase [Rothia dentocariosa M567]
gi|300380225|gb|EFJ76788.1| aminoacyl-tRNA hydrolase [Rothia dentocariosa M567]
Length = 194
Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 109/190 (57%), Gaps = 5/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQ--LDGLRTIL 58
+++ GLGNPG +Y + RHNIG M +D+I K K A + EG+ + G + +L
Sbjct: 5 WLIVGLGNPGPQYAKTRHNIGQMVLDKIAHEMGSTFKKHSKASAVVVEGRLGIGGPKVVL 64
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+K +MN SG + V FY + + ++ +V+HD+LD+ F T++LK GGG+ GHNGL+ I
Sbjct: 65 MKSLGYMNTSGGPVSAVAKFYGI-DPDHIIVVHDELDIPFDTIKLKIGGGEGGHNGLRDI 123
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
++ G K+Y R+R GIGRPP + +VL F++ E L +IDN ++ +L
Sbjct: 124 TKALGTKDYYRVRTGIGRPPGRMNTADYVLKPFTAAEAKDLPFLIDNSVDAVAMLITDGL 183
Query: 178 VSFLNHIVSV 187
+ S
Sbjct: 184 TAAQQRFHSA 193
>gi|325983635|ref|YP_004296037.1| peptidyl-tRNA hydrolase [Nitrosomonas sp. AL212]
gi|325533154|gb|ADZ27875.1| peptidyl-tRNA hydrolase [Nitrosomonas sp. AL212]
Length = 189
Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats.
Identities = 69/188 (36%), Positives = 105/188 (55%), Gaps = 3/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILI 59
M ++ GLGNPG EY RHN GF +DR+ P + +FH ++ + + L+
Sbjct: 1 MKLIVGLGNPGREYAGTRHNAGFEWVDRLSQMLHAPLKAEVRFHGLCTQIRQKDIDLWLL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+PQTFMN SGQ+++ + FYK+ E +V+HD+LDL G +LK GGG GHNGLK I+
Sbjct: 61 EPQTFMNRSGQAVVALCQFYKILPDE-IIVVHDELDLPPGIAKLKKGGGLGGHNGLKDIA 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G +++ RLRIGIG P D ++ +VL E + I PL+A+
Sbjct: 120 ARLGTQDFWRLRIGIGHPGDRNAVVGYVLHPPRKEETSLIDEAIQKSLEVWPLIAQGACE 179
Query: 179 SFLNHIVS 186
+ + + +
Sbjct: 180 AAMLKLHT 187
>gi|116669781|ref|YP_830714.1| peptidyl-tRNA hydrolase [Arthrobacter sp. FB24]
gi|166199303|sp|A0JU94|PTH_ARTS2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116609890|gb|ABK02614.1| peptidyl-tRNA hydrolase [Arthrobacter sp. FB24]
Length = 194
Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats.
Identities = 64/189 (33%), Positives = 109/189 (57%), Gaps = 4/189 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQ--LDGLRTILI 59
+++ GLGNPG EY NRHN+G M +D + K A + EG+ + G R +L
Sbjct: 5 WLIVGLGNPGTEYSNNRHNVGQMVLDELARRVGGSFKVHKARAHVLEGRLGIGGPRVVLA 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP ++MN+SG + + FY + + E+ + +HD++D+ F T++LK GGG+ GHNGL+ IS
Sbjct: 65 KPMSYMNVSGGPVSALSKFYDI-DPEHVVAVHDEIDIPFNTVKLKIGGGEGGHNGLRDIS 123
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ K+Y R+R+G+GRPP VL +F++ E+ L ++D+ A ++ + +
Sbjct: 124 KALATKDYLRVRVGVGRPPGRMDTADFVLKDFATTEKKDLPFLLDDAADAVETVVREGLA 183
Query: 179 SFLNHIVSV 187
+ +
Sbjct: 184 AAQQKYHTA 192
>gi|307544465|ref|YP_003896944.1| peptidyl-tRNA hydrolase [Halomonas elongata DSM 2581]
gi|307216489|emb|CBV41759.1| peptidyl-tRNA hydrolase [Halomonas elongata DSM 2581]
Length = 199
Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+ GL NPG EY RHN G ID + +KKF + +LDG L++P
Sbjct: 7 IIGLANPGSEYEATRHNAGAWLIDALVRDAGDTLRPEKKFLGRYARIRLDGQDIHLLEPT 66
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMN SG ++ + F+KL E LV HD+LDL GT R KTGGG GHNGL+ I
Sbjct: 67 TFMNRSGGAVAALAQFFKLAPDE-LLVAHDELDLAPGTARYKTGGGHGGHNGLRDIVRAL 125
Query: 123 GKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + + RLR+GIG P D + +VLG ER + ID +LP +
Sbjct: 126 GNDNGFHRLRLGIGHPGDARQVTNYVLGRPGKAERAAIDAAIDECCATLPQAIAGDWTKA 185
Query: 181 LNHIVSV 187
+ + S
Sbjct: 186 MQRLHSF 192
>gi|296122873|ref|YP_003630651.1| peptidyl-tRNA hydrolase [Planctomyces limnophilus DSM 3776]
gi|296015213|gb|ADG68452.1| peptidyl-tRNA hydrolase [Planctomyces limnophilus DSM 3776]
Length = 191
Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG +Y RHNIG+ + PA K +F A E L G+ IL++
Sbjct: 1 MKCIVGLGNPGGKYVGTRHNIGWEVTAELSRRGGAPAGKSRFDAITREVVLKGVPVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ ++ FYK+ + ++L++ DDL+L G LR++ GG G GL I +
Sbjct: 61 PQTFMNLSGRSVGQIAKFYKM-SPADFLIVCDDLNLPLGKLRVRAGGSSGGQKGLADILQ 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLR+G+GRPP T +VL F ER + + A + + S
Sbjct: 120 VLGTDAVPRLRLGVGRPPGTMDAAAYVLAQFRKDERIEVDLAVATAADAAEVWLADGVDS 179
Query: 180 FLNHIV 185
+N
Sbjct: 180 AMNRFN 185
>gi|260171342|ref|ZP_05757754.1| peptidyl-tRNA hydrolase [Bacteroides sp. D2]
Length = 219
Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 34 YLVVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFMDGRYGFTTSFSIKGRQLILLKP 93
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 94 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 152
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG I +VLG+F+ + + ++ +
Sbjct: 153 LGTQNYARLRFGIGSDFPRGGQIDYVLGHFTDEDWKTMDERLEMAGEIIKSFCLAGIDIT 212
Query: 181 LNHIV 185
+N
Sbjct: 213 MNQFN 217
>gi|255007965|ref|ZP_05280091.1| peptidyl-tRNA hydrolase [Bacteroides fragilis 3_1_12]
Length = 187
Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 98/185 (52%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM +D + + +K + + + G + IL+KP
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMVLDALAKANNLS-FKDGRYGFTATLSVKGRQMILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L+I DDL L FGTLRLK+ G DAGHNGLK I+
Sbjct: 62 STFMNLSGNAVRYWMQKENIP-LENMLIIVDDLALPFGTLRLKSKGSDAGHNGLKHIAAI 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG + VLG+F+ + + ++
Sbjct: 121 LGTQNYARLRFGIGNDFPKGGQVDFVLGHFTEEDWTTMNERLETAGEIAKSFCLAGIDIT 180
Query: 181 LNHIV 185
+N
Sbjct: 181 MNQFN 185
>gi|242056565|ref|XP_002457428.1| hypothetical protein SORBIDRAFT_03g007130 [Sorghum bicolor]
gi|241929403|gb|EES02548.1| hypothetical protein SORBIDRAFT_03g007130 [Sorghum bicolor]
Length = 256
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG++Y RHN+GF +DRI + + + G + + +++KP
Sbjct: 62 WLIAGLGNPGNKYYGTRHNVGFEMVDRIAGEEGITMNTIQSKSLLGIGSIGEVPVLVVKP 121
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q++MN SG+++ + +Y++P L + L+I+DD+ L G LRL+ GG HNGL+++ E
Sbjct: 122 QSYMNYSGEAIGPLAAYYQVP-LRHILLIYDDMSLPNGVLRLQKKGGHGRHNGLQNVIEN 180
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RL IGIG PP +L FSS ER + ++ ++ L +
Sbjct: 181 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDASLEQGVDAVRTLVLKGFCG 240
Query: 180 FLNHIVSVRK 189
V+K
Sbjct: 241 STERFNLVQK 250
>gi|221632813|ref|YP_002522035.1| peptidyl-tRNA hydrolase [Thermomicrobium roseum DSM 5159]
gi|221157249|gb|ACM06376.1| peptidyl-tRNA hydrolase [Thermomicrobium roseum DSM 5159]
Length = 239
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 73/188 (38%), Positives = 106/188 (56%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG EY E RHNIGF IDR+ ++++F E + + D +L+KP
Sbjct: 43 WLVVGLGNPGSEYMETRHNIGFWVIDRVAQLTNVVGFQRRFEGEFATVRTDRGLLLLLKP 102
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ + +YKL +L+ LV+HDD+DL GTLR + GG AGH+G++S++ +
Sbjct: 103 LTFMNRSGVAVAAAVRWYKL-SLDRTLVVHDDMDLPLGTLRFRQGGSAAGHHGVESVTRE 161
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G N + RLRIGIGRP VL F ER I A ++ + +
Sbjct: 162 LGSNGFGRLRIGIGRPTRREEGRDFVLSPFHPEERPLAERIAALAAEAVLVWHREGMTVA 221
Query: 181 LNHIVSVR 188
+N +R
Sbjct: 222 MNRFNGLR 229
>gi|124025041|ref|YP_001014157.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. NATL1A]
gi|166229433|sp|A2C082|PTH_PROM1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|123960109|gb|ABM74892.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. NATL1A]
Length = 202
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 64/195 (32%), Positives = 97/195 (49%), Gaps = 8/195 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILI 59
+ ++ GLGNPG EY + RHN+GFM ++ I + + KK E +T L+
Sbjct: 6 LKLLVGLGNPGTEYEKTRHNVGFMVLEEIARKNNCSFRESKKIFGRTCEYGSGIEKTRLL 65
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN SG+S+ +++ +V+ DD+DL G +R+++ G GHNGLKSI
Sbjct: 66 MPNTYMNESGKSVRLAKDWFNF-QNNQLIVLVDDMDLPLGKIRVRSKGSSGGHNGLKSII 124
Query: 120 EKCGK-NYKRLRIGIGRPPD-----TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
G +KRL+IGIG P + + + HVLG FS E L II I + +
Sbjct: 125 NHLGTAEFKRLKIGIGAPSNDQQERKSKTVSHVLGRFSKEEFIILNFIIQEIISCIESIT 184
Query: 174 KREDVSFLNHIVSVR 188
+ S +
Sbjct: 185 SNNWEKISTRLNSYK 199
>gi|330961720|gb|EGH61980.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 194
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++RI + ++KF G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGALFVERIAAAQRVNLVPERKFFGLTGRFAHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LKTGGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKTGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLR+GIG P D + + VLG E+ L ID LP + E
Sbjct: 125 LGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNR 184
Query: 180 FLNHIVSVR 188
+ ++ S +
Sbjct: 185 AMKNLHSQK 193
>gi|223983658|ref|ZP_03633834.1| hypothetical protein HOLDEFILI_01115 [Holdemania filiformis DSM
12042]
gi|223964355|gb|EEF68691.1| hypothetical protein HOLDEFILI_01115 [Holdemania filiformis DSM
12042]
Length = 187
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 64/189 (33%), Positives = 103/189 (54%), Gaps = 3/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN GF +DR+ + KF+A I+ + +L+K
Sbjct: 1 MKLIVGLGNPGREYEHTRHNAGFDVLDRLADLLNTGISQSKFNALITTVRTGQETILLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++++ + FYK+P ++ LVIHDDLDL G +R++T G G G+K+I +
Sbjct: 61 PQTYMNNSGEAVIQAVQFYKIP-VDQILVIHDDLDLPVGKIRIRTSGSAGGQKGMKNIID 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
++ R+R+GI + P I+ +VLG + +R I++ A +
Sbjct: 120 HLHTQDIARIRVGIDKNP-LIPIVDYVLGKVPADQREDYQAAINHAAEAAKASMTMPISD 178
Query: 180 FLNHIVSVR 188
+N R
Sbjct: 179 VMNRFNRSR 187
>gi|15599867|ref|NP_253361.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa PAO1]
gi|107099661|ref|ZP_01363579.1| hypothetical protein PaerPA_01000679 [Pseudomonas aeruginosa PACS2]
gi|116052817|ref|YP_793134.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa UCBPP-PA14]
gi|218893769|ref|YP_002442638.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa LESB58]
gi|254238588|ref|ZP_04931911.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa C3719]
gi|254244436|ref|ZP_04937758.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa 2192]
gi|296391493|ref|ZP_06880968.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa PAb1]
gi|14195078|sp|Q9HVC3|PTH_PSEAE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|122257172|sp|Q02G02|PTH_PSEAB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226723259|sp|B7V0L8|PTH_PSEA8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|9950928|gb|AAG08059.1|AE004881_2 peptidyl-tRNA hydrolase [Pseudomonas aeruginosa PAO1]
gi|115588038|gb|ABJ14053.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170519|gb|EAZ56030.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa C3719]
gi|126197814|gb|EAZ61877.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa 2192]
gi|218773997|emb|CAW29812.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa LESB58]
Length = 194
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G + ++R+ +K+ + + G L+ P
Sbjct: 6 LIVGLGNPGPEYDQTRHNAGALFVERLAHAQGVSLVADRKYFGLVGKFSHQGKDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + F+++ + LV HD+LD+ G +LKTGGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQSVAALAGFFRIAP-DAILVAHDELDMPPGVAKLKTGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLR+GIG P ++ + +VLG E+ L ID LP + +
Sbjct: 125 LGNQNSFHRLRLGIGHPGHSSLVSGYVLGRAPRSEQELLDTSIDFALGVLPEMLAGDWTR 184
Query: 180 FLNHIVSVR 188
+ + S +
Sbjct: 185 AMQKLHSQK 193
>gi|119963338|ref|YP_947126.1| peptidyl-tRNA hydrolase [Arthrobacter aurescens TC1]
gi|166199302|sp|A1R4G4|PTH_ARTAT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119950197|gb|ABM09108.1| peptidyl-tRNA hydrolase [Arthrobacter aurescens TC1]
Length = 194
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 113/190 (59%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQ--LDGLRTILI 59
+++ GLGNPG EY NRHN+G M +D + S K A++ EG+ + G R +L
Sbjct: 5 WLIVGLGNPGSEYSNNRHNVGQMVLDELASRMGGKFKVHKARAQVVEGRLGIGGPRVVLA 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN+SG + + NF+ + ++ + +HD++D+ F T++LK GGG+ GHNGL+ IS
Sbjct: 65 KPMTYMNVSGGPVAGLCNFFDIAP-DHVIAVHDEIDIPFNTVKLKMGGGEGGHNGLRDIS 123
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ K+Y R+R+G+GRPP +VL +F++ E+ L ++D A ++ LL + +
Sbjct: 124 KALATKDYLRVRVGVGRPPGRMETADYVLRDFATAEKKELPFLLDEAADAVELLMDQGLL 183
Query: 179 SFLNHIVSVR 188
+ +
Sbjct: 184 AAQQKHHPAK 193
>gi|293391725|ref|ZP_06636059.1| peptidyl-tRNA hydrolase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290952259|gb|EFE02378.1| peptidyl-tRNA hydrolase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 194
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN G ++R+ + + KF + ++G +
Sbjct: 5 KLIVGLGNPGDKYADTRHNAGVWLMERLARRFNVILNPENKFFGYTARAVVNGKEVRFLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LV+HD+LDL GT +LK GGG GHNGLK I
Sbjct: 65 PTTFMNLSGKAVGTLANFYRIKP-EEILVLHDELDLPPGTAKLKLGGGHGGHNGLKDIVA 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N+ RLRIGIG P + +VL + ER L +D + LL K V
Sbjct: 124 QLGNSNNFHRLRIGIGHPGHRDLVAGYVLNKPAPSERDALDKALDEATDCVDLLFKDGMV 183
Query: 179 SFLNHIVSVR 188
+ + S +
Sbjct: 184 KATHRLNSFK 193
>gi|313145681|ref|ZP_07807874.1| peptidyl-tRNA hydrolase [Bacteroides fragilis 3_1_12]
gi|313134448|gb|EFR51808.1| peptidyl-tRNA hydrolase [Bacteroides fragilis 3_1_12]
Length = 199
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 98/185 (52%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM +D + + +K + + + G + IL+KP
Sbjct: 15 YLIVGLGNIGPEYHETRHNIGFMVLDALAKANNLS-FKDGRYGFTATLSVKGRQMILLKP 73
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L+I DDL L FGTLRLK+ G DAGHNGLK I+
Sbjct: 74 STFMNLSGNAVRYWMQKENIP-LENMLIIVDDLALPFGTLRLKSKGSDAGHNGLKHIAAI 132
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG + VLG+F+ + + ++
Sbjct: 133 LGTQNYARLRFGIGNDFPKGGQVDFVLGHFTEEDWTTMNERLETAGEIAKSFCLAGIDIT 192
Query: 181 LNHIV 185
+N
Sbjct: 193 MNQFN 197
>gi|160887364|ref|ZP_02068367.1| hypothetical protein BACOVA_05383 [Bacteroides ovatus ATCC 8483]
gi|156107775|gb|EDO09520.1| hypothetical protein BACOVA_05383 [Bacteroides ovatus ATCC 8483]
Length = 219
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 34 YLVVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFMDGRYGFTTSFSIKGRQLILLKP 93
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 94 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAI 152
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG I +VLG+F+ + + ++ +
Sbjct: 153 LGTQNYARLRFGIGSDFPRGGQIDYVLGHFTDEDWKTMDERLEMAGEIIKSFCLAGIDIT 212
Query: 181 LNHIV 185
+N
Sbjct: 213 MNQFN 217
>gi|282882227|ref|ZP_06290866.1| aminoacyl-tRNA hydrolase [Peptoniphilus lacrimalis 315-B]
gi|281297992|gb|EFA90449.1| aminoacyl-tRNA hydrolase [Peptoniphilus lacrimalis 315-B]
Length = 192
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 109/187 (58%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+F++AGLGNPG +Y + +HNIGF +D+I K KF + E ++ R IL+K
Sbjct: 4 LFVIAGLGNPGKDYEKTKHNIGFSTVDKIAEKLSVNMNKIKFKGLLGETRIGQNRLILLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ ++FYK+ +++N +VI DD+D++FG L++K G HNGLKSI
Sbjct: 64 PQTFMNNSGESIRMCLDFYKV-DVKNLIVIVDDIDINFGQLKIKKEGSAGTHNGLKSIVN 122
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K++ R+++GIG+ + + VL NFSS + + D + + ++
Sbjct: 123 HLSSKSFPRIKVGIGQKKEGEDLANFVLSNFSSNDAKHIDKATDAARDAAIDIVEKGIEY 182
Query: 180 FLNHIVS 186
+N +
Sbjct: 183 TMNAYNN 189
>gi|119390922|sp|Q3ARM4|PTH_CHLCH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 190
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 97/190 (51%), Gaps = 3/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGF D + + H K+K ++ +L +IK
Sbjct: 1 MKLIIGLGNPGTEYDGTRHNIGFAVADALAAHHNASFSKEKGRYLSAKIKLGSESVGIIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG +++ MNFYK+ E +VI DDL+L GT+RL+ G G NGLK I E
Sbjct: 61 PMTYMNHSGHAVVAAMNFYKVARTE-IVVICDDLNLPVGTMRLRPKGSAGGQNGLKHIIE 119
Query: 121 KCGKN-YKRLRIGIG-RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N + RLRIGIG + VLG FS E+ + + + A
Sbjct: 120 CFGSNEFARLRIGIGSQNMPKGGFSSFVLGKFSEQEKSEIAIMTVSARDCAIDFALHGLG 179
Query: 179 SFLNHIVSVR 188
+NH + +
Sbjct: 180 HAMNHFNTSK 189
>gi|315501802|ref|YP_004080689.1| peptidyl-tRNA hydrolase [Micromonospora sp. L5]
gi|315408421|gb|ADU06538.1| peptidyl-tRNA hydrolase [Micromonospora sp. L5]
Length = 196
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 75/188 (39%), Positives = 112/188 (59%), Gaps = 5/188 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFH-AEISEGQLD--GLRTIL 58
++V GLGNPG EY NRHN+GFM D + + + K AE +EG+L G + +L
Sbjct: 8 WLVVGLGNPGREYAGNRHNVGFMVADLLAARVGAKFGRHKRAMAEAAEGRLGFGGPKLVL 67
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG + + F+K+P + + +HD+LD+ +G +R+K GGG+ GHNGL+S+
Sbjct: 68 LKPLTYMNLSGGPVAGLAQFHKIPPA-HVIAVHDELDIPYGQVRVKCGGGEGGHNGLRSM 126
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
S+ G K+Y R+R GIGRPP +VL +FSS ER L ++D A + + +
Sbjct: 127 SKSLGTKDYVRVRFGIGRPPGRQDPADYVLSDFSSSERKELEFLVDRAADVVESVVLKGV 186
Query: 178 VSFLNHIV 185
N
Sbjct: 187 EPTQNLYH 194
>gi|332169725|gb|AEE18980.1| peptidyl-tRNA hydrolase [Krokinobacter diaphorus 4H-3-7-5]
Length = 210
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 97/185 (52%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G +Y E RHNIGF +D +K +I+ ++ G IL+KP
Sbjct: 26 FLIVGLGNIGPKYTETRHNIGFKVVDAFAKAQETTFETEKL-GDIARTKVKGKTVILLKP 84
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + K+P +EN LVI DDL+L+FGT+R+KT G GHNGLK +
Sbjct: 85 NTFMNLSGKAIRYWLQQEKIP-VENLLVITDDLNLEFGTIRVKTKGSAGGHNGLKDTQAQ 143
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ Y R R GI T + +VLG ++ E+ L +D + +
Sbjct: 144 LNTSAYNRFRFGISDAFSTGRQVDYVLGEWTPEEQASLPERLDKSCEVITSFVSGGINNT 203
Query: 181 LNHIV 185
+N
Sbjct: 204 MNAYN 208
>gi|261868210|ref|YP_003256132.1| peptidyl-tRNA hydrolase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261413542|gb|ACX82913.1| peptidyl-tRNA hydrolase [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 227
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ G+GNPG +Y + RHN G ++R+ + + KF + ++G +
Sbjct: 38 KLIVGIGNPGDKYADTRHNAGVWLMERLARRFNVILNPENKFFGYTAHAVVNGKEVRFLV 97
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + NFY++ E LV+HD+LDL GT +LK GGG GHNGLK I
Sbjct: 98 PTTFMNLSGKAVGTLANFYRIKP-EEILVLHDELDLPPGTAKLKLGGGHGGHNGLKDIVA 156
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N+ RLRIGIG P + +VL + ER L +D + LL K V
Sbjct: 157 QLGNSNNFHRLRIGIGHPGHRDLVAGYVLNKPAPSERDALDKALDEATDCVELLFKDGMV 216
Query: 179 SFLNHIVSVR 188
+ + S +
Sbjct: 217 KATHRLNSFK 226
>gi|269792683|ref|YP_003317587.1| peptidyl-tRNA hydrolase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100318|gb|ACZ19305.1| peptidyl-tRNA hydrolase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 199
Score = 213 bits (544), Expect = 7e-54, Method: Composition-based stats.
Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEIS-EGQLDGLRTILI 59
M ++ GLGNPG +Y RHN+G++ D + + +++F + + LDG L+
Sbjct: 1 MRLIVGLGNPGPQYVWTRHNVGWLAADHLAQSLGLGSPRERFDSLLWDRFALDGEPCCLM 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+++ + + FYKL + ++ +VI+DD+ L FG LR++ G G G+ SI
Sbjct: 61 KPTTYMNLSGRAVAQAVRFYKL-DPQDVMVIYDDVALPFGRLRMRDRGSAGGQKGMGSII 119
Query: 120 EKCGK-NYKRLRIGIGRPPD-TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G R+R+G+G PPD + VL S E + + +L L +
Sbjct: 120 GALGTLEIPRIRVGVGSPPDPRMDLADWVLSRLSPREVASWPKVAQGVHEALSLWIREGV 179
Query: 178 VSFLNHIVS 186
++ + +
Sbjct: 180 QRAMSKVNA 188
>gi|329961418|ref|ZP_08299541.1| aminoacyl-tRNA hydrolase [Bacteroides fluxus YIT 12057]
gi|328531895|gb|EGF58718.1| aminoacyl-tRNA hydrolase [Bacteroides fluxus YIT 12057]
Length = 187
Score = 213 bits (544), Expect = 7e-54, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM +D + + + + + + G + +L+KP
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMVVDALAKAAGAT-FTDRRYGFTTTLSVKGRQLLLLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STYMNLSGNAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG I VLG+F+ + + + +
Sbjct: 121 LGTQNYARLRFGIGNEFPRGGQIDFVLGHFTDEDWKTMDERLKTAGEIVKSFCLAGIDIT 180
Query: 181 LNHIV 185
+N
Sbjct: 181 MNQFN 185
>gi|78187065|ref|YP_375108.1| peptidyl-tRNA hydrolase [Chlorobium luteolum DSM 273]
gi|119390974|sp|Q3B3L6|PTH_PELLD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78166967|gb|ABB24065.1| peptidyl-tRNA hydrolase [Chlorobium luteolum DSM 273]
Length = 190
Score = 213 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 98/189 (51%), Gaps = 7/189 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP Y RHNIGF +D + + K ++ +LIK
Sbjct: 1 MKLIIGLGNPESRYNNTRHNIGFDLVDSLAAAFGSSFSSGKGKYLAAKITHRQETLMLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG +++ MNF+K+ + LV+ DDL+L GT+RL+ G G NGLK I E
Sbjct: 61 PTTYMNLSGHAVVAAMNFHKV-QKNDILVVCDDLNLPSGTMRLRAKGSAGGQNGLKHIIE 119
Query: 121 KCGKN-YKRLRIGI--GR-PPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G + + RLRIGI G PP + VLG FS+ ER + +++ ++ AK
Sbjct: 120 SLGSDEFARLRIGIRLGEMPPGS--FSSFVLGKFSAEERVVMDRTLESCREAVLDFAKNG 177
Query: 177 DVSFLNHIV 185
+NH
Sbjct: 178 IEHAMNHYN 186
>gi|21909541|ref|NP_663809.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS315]
gi|28894917|ref|NP_801267.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes SSI-1]
gi|25091008|sp|Q8K8Z7|PTH_STRP3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|21903721|gb|AAM78612.1| putative peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS315]
gi|28810162|dbj|BAC63100.1| putative peptidyl-tRNA hydrolase [Streptococcus pyogenes SSI-1]
Length = 189
Score = 213 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HNIGFM ID I K F A+I ++ + +K
Sbjct: 3 KMIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVCFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + ++ + +VI+DDLD++ LRL++ G GHNG+KSI
Sbjct: 63 PTTFMNNSGIAVKALLTYYNI-DITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL-LAKREDV 178
G + + R+++GIGRP +I HV+G F++ + + +D + ++ L + +
Sbjct: 122 HIGTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQENDFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQKFN 188
>gi|320109098|ref|YP_004184688.1| peptidyl-tRNA hydrolase [Terriglobus saanensis SP1PR4]
gi|319927619|gb|ADV84694.1| peptidyl-tRNA hydrolase [Terriglobus saanensis SP1PR4]
Length = 201
Score = 213 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY HN GF+ IDRI ++ A + L G +L K
Sbjct: 1 MKLIVGLGNPGPEYVFTPHNAGFLAIDRIAEDRNAVVSNRRGRALTGKAILAGHECLLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MN SG S+ ++ +L ++ +V++D+L G LRLK G GHNG+KSIS
Sbjct: 61 PETYMNSSGASVAALVQELELDPQKDLIVLYDELAFPLGELRLKQNGSANGHNGVKSISS 120
Query: 121 KCGK-NYKRLRIGIGRP--PDTAHI----IRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
G + R+RIG+GRP PD + ++L + + ++D +++ +
Sbjct: 121 SLGTEEWMRVRIGVGRPNAPDGREVKAGGKDYLLQPMRKADLAQMDEVLDRALQAVEAIL 180
Query: 174 KREDVSFLNHIV 185
K +
Sbjct: 181 KDGIAKAMTQYN 192
>gi|237654285|ref|YP_002890599.1| peptidyl-tRNA hydrolase [Thauera sp. MZ1T]
gi|237625532|gb|ACR02222.1| peptidyl-tRNA hydrolase [Thauera sp. MZ1T]
Length = 226
Score = 213 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 69/185 (37%), Positives = 100/185 (54%), Gaps = 5/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY E RHN GF +R+ +++ +FH ++ + G+ L+ P
Sbjct: 11 LIVGLGNPGAEYSETRHNAGFWFCERLADQLGARYSFESRFHGLVANAREAGM--WLLMP 68
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SGQ++ + FY++ E LV+HD+LD+ G LRLK GGG GHNGLK S
Sbjct: 69 QTFMNRSGQAIGALARFYRIEPAE-ILVVHDELDIPPGQLRLKFGGGLGGHNGLKDTSAH 127
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLRIGIG P D ++ VL E+ + +D P + + E +
Sbjct: 128 LGTNDYWRLRIGIGHPGDRNEVVNFVLKPARREEQQQIDEALDKALAVWPQIVRGELNAA 187
Query: 181 LNHIV 185
+
Sbjct: 188 ATRLN 192
>gi|327399266|ref|YP_004340135.1| peptidyl-tRNA hydrolase [Hippea maritima DSM 10411]
gi|327181895|gb|AEA34076.1| Peptidyl-tRNA hydrolase [Hippea maritima DSM 10411]
Length = 193
Score = 213 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 101/190 (53%), Gaps = 6/190 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++V GLGNPG EY HN+GFM D + F K KF E L + ++K
Sbjct: 3 WLVVGLGNPGKEYALTPHNVGFMVCDSLSFLFDFDFTLKNKFKGFFGEFSLGSYKVGVLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG S+ EV +FYK+P L +VIHDD+DL G +++K GH G++SI +
Sbjct: 63 PITYMNLSGISVGEVFSFYKIP-LNRLIVIHDDVDLPLGRIKIKKNSSSGGHKGVESIIQ 121
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K++ R++IG+GR + + +VL NF E + + A ++ + K
Sbjct: 122 TLSSKDFARVKIGVGREGN---VRDYVLRNFKENELEIVNQAVRLSADAVVCIIKEGLNK 178
Query: 180 FLNHIVSVRK 189
+N S+ +
Sbjct: 179 AMNEYNSLNR 188
>gi|74316407|ref|YP_314147.1| peptidyl-tRNA hydrolase [Thiobacillus denitrificans ATCC 25259]
gi|119391033|sp|Q3SLR3|PTH_THIDA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|74055902|gb|AAZ96342.1| peptidyl-tRNA hydrolase [Thiobacillus denitrificans ATCC 25259]
Length = 202
Score = 213 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 73/186 (39%), Positives = 103/186 (55%), Gaps = 7/186 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E RHN GF R+ A + +FH + G R +L+ P
Sbjct: 11 LIVGLGNPGRDYEETRHNAGFWFCARLAQAWGAALAHESRFHGIVGR---HGTRWMLL-P 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SGQ++ + F+++ E LV+HD+LD+ G LRLK GGG GHNGLK I+
Sbjct: 67 QTFMNRSGQAVGALARFHRIAPAE-ILVVHDELDIPPGQLRLKFGGGMGGHNGLKDITAH 125
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y RLRIGIG P D + ++ +VL E+ + I+ LPL+ K E +
Sbjct: 126 LGTQDYWRLRIGIGHPGDRSEVVNYVLKPPRREEQADIDAAIERALGLLPLIEKGEWNAA 185
Query: 181 LNHIVS 186
S
Sbjct: 186 TQRANS 191
>gi|184154690|ref|YP_001843030.1| peptidyl-tRNA hydrolase [Lactobacillus fermentum IFO 3956]
gi|227514330|ref|ZP_03944379.1| aminoacyl-tRNA hydrolase [Lactobacillus fermentum ATCC 14931]
gi|238692940|sp|B2GA68|PTH_LACF3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|183226034|dbj|BAG26550.1| peptidyl-tRNA hydrolase [Lactobacillus fermentum IFO 3956]
gi|227087302|gb|EEI22614.1| aminoacyl-tRNA hydrolase [Lactobacillus fermentum ATCC 14931]
Length = 186
Score = 213 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 62/188 (32%), Positives = 102/188 (54%), Gaps = 5/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM ++++ FH +K A G ++G + +L+
Sbjct: 1 MKMIVGLGNIGTRYDETRHNAGFMVVEQLARDFHLGAFTHEKVEAVTVTGLINGQKVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ +M +Y + L++ +V+ DDLD+ G ++LK G GHNGLKS+
Sbjct: 61 KPTTFMNESGRAVKPLMEYYDIA-LDDLIVVSDDLDMPVGKIKLKQRGASGGHNGLKSLI 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-ED 177
+ G + + R+++GI P ++ HVLG F + ER + ++L +
Sbjct: 120 DHLGTREFNRVKLGIDHP-KFGSVVSHVLGRFDTEERPVFEGAVLQAEQALIKWVQGTSF 178
Query: 178 VSFLNHIV 185
+N
Sbjct: 179 DQLMNEYN 186
>gi|56808861|ref|ZP_00366572.1| COG0193: Peptidyl-tRNA hydrolase [Streptococcus pyogenes M49 591]
gi|71902672|ref|YP_279475.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS6180]
gi|94987636|ref|YP_595737.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS9429]
gi|94989514|ref|YP_597614.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS10270]
gi|94991502|ref|YP_599601.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS2096]
gi|71801767|gb|AAX71120.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS6180]
gi|94541144|gb|ABF31193.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS9429]
gi|94543022|gb|ABF33070.1| Peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS10270]
gi|94545010|gb|ABF35057.1| Peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS2096]
Length = 204
Score = 213 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HNIGFM ID I K F A+I ++ + +K
Sbjct: 18 KMIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVK 77
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + ++ + +VI+DDLD++ LRL++ G GHNG+KSI
Sbjct: 78 PTTFMNNSGIAVKALLTYYNI-DITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIA 136
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL-LAKREDV 178
G + + R+++GIGRP +I HV+G F++ + + +D + ++ L + +
Sbjct: 137 HIGTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQENDFE 196
Query: 179 SFLNHIV 185
+
Sbjct: 197 KTMQKFN 203
>gi|90416945|ref|ZP_01224874.1| peptidyl-tRNA hydrolase [marine gamma proteobacterium HTCC2207]
gi|90331292|gb|EAS46536.1| peptidyl-tRNA hydrolase [marine gamma proteobacterium HTCC2207]
Length = 195
Score = 213 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN G + + + KF + ++ +D L+ P
Sbjct: 7 LIVGLGNPGPNYDRTRHNAGADLVLELAKSCSGTLKHESKFFGDTAKITIDNRDVRLLIP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQS+ + FY++P +E LV+HD+LD+ G R K GGG GHNGL+ I +
Sbjct: 67 TTFMNRSGQSVAALARFYQVP-VEAILVVHDELDISPGAARFKKGGGHGGHNGLRDIVQS 125
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
KN+ RLRIGIG P D + +VL S ++ + ID+ R+LPL +
Sbjct: 126 LANNKNFARLRIGIGHPGDARQVADYVLKKASPSDQQLISNSIDDALRTLPLAIAGQWER 185
Query: 180 FLNHIVSVRK 189
+ + +V++
Sbjct: 186 AMTELHTVQQ 195
>gi|218708750|ref|YP_002416371.1| peptidyl-tRNA hydrolase [Vibrio splendidus LGP32]
gi|254783897|sp|B7VKG8|PTH_VIBSL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|218321769|emb|CAV17724.1| Peptidyl-tRNA hydrolase [Vibrio splendidus LGP32]
Length = 196
Score = 213 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + H + KF + G L+
Sbjct: 6 KLLVGLANPGPEYAKTRHNAGAWVVEELARVHNVTLKNEPKFFGLTGRIMVHGEDLRLLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + FY++ E +V HD+LDL G + K GGG GHNGLK I
Sbjct: 66 PTTFMNLSGKAVAALAKFYQIKP-EEIMVAHDELDLPPGIGKFKKGGGHGGHNGLKDIIS 124
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G N + RLR+GIG P + +VLG + E+ + ++D RSL +L K
Sbjct: 125 KQGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECIEAVVDESVRSLDILLKDGLP 184
Query: 179 SFLNHIVSVR 188
N + + +
Sbjct: 185 KAQNRLHTFK 194
>gi|50913351|ref|YP_059323.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS10394]
gi|94993401|ref|YP_601499.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS10750]
gi|50902425|gb|AAT86140.1| Peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS10394]
gi|94546909|gb|ABF36955.1| Peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS10750]
Length = 204
Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HNIGFM ID I K F A+I ++ + +K
Sbjct: 18 KMIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVK 77
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + ++ + +VI+DDLD++ LRL++ G GHNG+KSI
Sbjct: 78 PTTFMNNSGIAVKALLTYYNI-DITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIA 136
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL-LAKREDV 178
G + + R+++GIGRP +I HV+G F++ + + +D + ++ L + +
Sbjct: 137 HIGTQEFNRIKVGIGRPLKGMTVISHVMGQFNTEDNIAISLTLDRVVNAVKFYLQENDFE 196
Query: 179 SFLNHIV 185
+
Sbjct: 197 KTMQKFN 203
>gi|302865258|ref|YP_003833895.1| peptidyl-tRNA hydrolase [Micromonospora aurantiaca ATCC 27029]
gi|302568117|gb|ADL44319.1| peptidyl-tRNA hydrolase [Micromonospora aurantiaca ATCC 27029]
Length = 195
Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 75/188 (39%), Positives = 112/188 (59%), Gaps = 5/188 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFH-AEISEGQLD--GLRTIL 58
++V GLGNPG EY NRHN+GFM D + + + K AE +EG+L G + +L
Sbjct: 7 WLVVGLGNPGREYAGNRHNVGFMVADLLAARVGAKFGRHKRAMAEAAEGRLGFGGPKLVL 66
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG + + F+K+P + + +HD+LD+ +G +R+K GGG+ GHNGL+S+
Sbjct: 67 LKPLTYMNLSGGPVAGLAQFHKIPPA-HVIAVHDELDIPYGQVRVKCGGGEGGHNGLRSM 125
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
S+ G K+Y R+R GIGRPP +VL +FSS ER L ++D A + + +
Sbjct: 126 SKSLGTKDYVRVRFGIGRPPGRQDPADYVLSDFSSSERKELEFLVDRAADVVESVVLKGV 185
Query: 178 VSFLNHIV 185
N
Sbjct: 186 EPTQNLYH 193
>gi|53712488|ref|YP_098480.1| peptidyl-tRNA hydrolase [Bacteroides fragilis YCH46]
gi|60680688|ref|YP_210832.1| peptidyl-tRNA hydrolase [Bacteroides fragilis NCTC 9343]
gi|253563481|ref|ZP_04840938.1| peptidyl-tRNA hydrolase [Bacteroides sp. 3_2_5]
gi|265762651|ref|ZP_06091219.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_1_16]
gi|68052914|sp|Q64X30|PTH_BACFR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|81316244|sp|Q5LG56|PTH_BACFN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|52215353|dbj|BAD47946.1| peptidyl-tRNA hydrolase [Bacteroides fragilis YCH46]
gi|60492122|emb|CAH06885.1| putative peptidyl-tRNA hydrolase [Bacteroides fragilis NCTC 9343]
gi|251947257|gb|EES87539.1| peptidyl-tRNA hydrolase [Bacteroides sp. 3_2_5]
gi|263255259|gb|EEZ26605.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_1_16]
gi|301162215|emb|CBW21760.1| putative peptidyl-tRNA hydrolase [Bacteroides fragilis 638R]
Length = 187
Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 97/185 (52%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM +D + + + + + + G + IL+KP
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMVLDALARANNLS-FTDGRYGFTTTLSVKGRQMILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L+I DDL L FGTLRLK+ G DAGHNGLK I+
Sbjct: 62 STFMNLSGNAVRYWMQKENIP-LENVLIIVDDLALPFGTLRLKSKGSDAGHNGLKHIATI 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG I VLG+F+ + + ++
Sbjct: 121 LGTQNYARLRFGIGNDFPRGGQIDFVLGHFTDEDWKTMDERLETAGEIAKSFCLAGIDIT 180
Query: 181 LNHIV 185
+N
Sbjct: 181 MNQFN 185
>gi|66044195|ref|YP_234036.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. syringae B728a]
gi|81308516|sp|Q4ZXX4|PTH_PSEU2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|63254902|gb|AAY35998.1| Peptidyl-tRNA hydrolase [Pseudomonas syringae pv. syringae B728a]
Length = 194
Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G ++RI + ++KF G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVDLVPERKFFGLTGRFTHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLR+GIG P D + + VLG E+ L ID LP + E
Sbjct: 125 LGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNR 184
Query: 180 FLNHIVSVR 188
+ ++ S +
Sbjct: 185 AMKNLHSQK 193
>gi|26451849|dbj|BAC43017.1| putative CRS2 [Arabidopsis thaliana]
Length = 246
Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 100/190 (52%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHNIGF ID I + A + G + + +L+KP
Sbjct: 52 WLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKP 111
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q +MN SG+S+ + +Y++P L + L+I+DDL L G LRL+ GG + HNGLK+++E
Sbjct: 112 QGYMNFSGESVGPLAAYYQIP-LRHILMIYDDLGLSNGVLRLQPKGGHSQHNGLKNVTEH 170
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ Y RL IGIG PP + +L FS ER + ++ + L +
Sbjct: 171 LNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSD 230
Query: 180 FLNHIVSVRK 189
++ +K
Sbjct: 231 SISRFNLGQK 240
>gi|330811726|ref|YP_004356188.1| Aminoacyl-tRNA hydrolase (Peptidyl-tRNA hydrolase) [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327379834|gb|AEA71184.1| Aminoacyl-tRNA hydrolase (Peptidyl-tRNA hydrolase) [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 194
Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN G + ++RI A +K+ G L+
Sbjct: 5 KLIVGLGNPGAEYEQTRHNAGALFVERIAQAQGVSLAADRKYFGLTGRFSHQGQDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ + F+++ E LV HD+LDL G +LK GGG GHNGL+ I
Sbjct: 65 PTTYMNRSGQAVAALAGFFRIKP-EEILVAHDELDLPPGVAKLKQGGGHGGHNGLRDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G + RLR+GIG P + + VLG E+ L ID LP + E
Sbjct: 124 QLGNQNTFHRLRLGIGHPGVASMVSNFVLGRAPRAEQEKLDASIDFALGVLPDILAGEWN 183
Query: 179 SFLNHIVSVR 188
+ ++ S +
Sbjct: 184 RAMKNLHSQK 193
>gi|213962334|ref|ZP_03390597.1| peptidyl-tRNA hydrolase [Capnocytophaga sputigena Capno]
gi|213955000|gb|EEB66319.1| peptidyl-tRNA hydrolase [Capnocytophaga sputigena Capno]
Length = 188
Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++A LGN G EY RHNIGFM D + H +K +++E ++ G IL+KP
Sbjct: 4 YLIACLGNIGAEYANTRHNIGFMVADTLAKTHNVTFSTQKL-GDLTEIKVKGRTFILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M +P LEN LVI DDL++ FGT+R+K G D GHNGLK I +
Sbjct: 63 STYMNLSGKAVRYWMEKENIP-LENLLVITDDLNIPFGTIRIKGKGSDGGHNGLKDIQAQ 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ Y RLR GI ++ I +VLG ++ E+ L ++ A ++
Sbjct: 122 LNTQQYARLRFGISSNFESGRQIDYVLGEWAPEEKVLLPERLEKCAEAVISFGLAGLNIT 181
Query: 181 LNHIVS 186
+N +
Sbjct: 182 MNTFNN 187
>gi|193217035|ref|YP_002000277.1| peptidyl-tRNA hydrolase [Mycoplasma arthritidis 158L3-1]
gi|238692484|sp|B3PNH1|PTH_MYCA5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|193002358|gb|ACF07573.1| peptidyl-tRNA hydrolase [Mycoplasma arthritidis 158L3-1]
Length = 181
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 100/186 (53%), Gaps = 9/186 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY + RHNIGFM +D+I +KKF+ IL K
Sbjct: 1 MKLIVGLGNPGTEYEKTRHNIGFMAVDKICEKLNISLNEKKFNGIFYR----NKDFILAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG + +M +Y + ++E+ +V++DD+DL G ++ G GHNG+K I E
Sbjct: 57 PLTYMNKSGDFVQALMQYYDI-SVEDLIVVYDDMDLLIGKAVIRQKGSSGGHNGIKDIIE 115
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K +N KRL++GIGR + I VLG FS + + I+D +A +L +
Sbjct: 116 KLKTENIKRLKVGIGR---GDNAINFVLGKFSIADYQIIDKILDGVADALVSCIYNDVRF 172
Query: 180 FLNHIV 185
+N
Sbjct: 173 VMNKFN 178
>gi|42573527|ref|NP_974860.1| peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana]
gi|332006907|gb|AED94290.1| chloroplastic group IIB intron splicing facilitator CRS2-A
[Arabidopsis thaliana]
Length = 250
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHNIGF ID I + A + G + + +L+KP
Sbjct: 56 WLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKP 115
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q +MN SG+S+ + +Y++P L + L+I+DD+ L G LRL+ GG + HNGLK+++E
Sbjct: 116 QGYMNFSGESVGPLAAYYQIP-LRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEH 174
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ Y RL IGIG PP + +L FS ER + ++ + L +
Sbjct: 175 LNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSD 234
Query: 180 FLNHIVSVRK 189
++ +K
Sbjct: 235 SISRFNLGQK 244
>gi|21241721|ref|NP_641303.1| peptidyl-tRNA hydrolase [Xanthomonas axonopodis pv. citri str. 306]
gi|24418603|sp|Q8PNT8|PTH_XANAC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|21107090|gb|AAM35839.1| peptidyl tRNA hydrolase [Xanthomonas axonopodis pv. citri str. 306]
Length = 193
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 96/189 (50%), Gaps = 3/189 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D + A K E ++ ++ G L+KP
Sbjct: 6 LIVGLGNPGPEHAQTRHNAGFRFVDALIERSGARWALDSKLFGETAKVEVAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E+ LV HD+LDL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSITAALRFWKIEP-EHLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG + + +D LPL +
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGREDDAAIGAAVDAAIDVLPLAMEGNFNEA 184
Query: 181 LNHIVSVRK 189
+ + + +K
Sbjct: 185 MKRLHTEKK 193
>gi|294786765|ref|ZP_06752019.1| aminoacyl-tRNA hydrolase [Parascardovia denticolens F0305]
gi|315226388|ref|ZP_07868176.1| aminoacyl-tRNA hydrolase [Parascardovia denticolens DSM 10105]
gi|294485598|gb|EFG33232.1| aminoacyl-tRNA hydrolase [Parascardovia denticolens F0305]
gi|315120520|gb|EFT83652.1| aminoacyl-tRNA hydrolase [Parascardovia denticolens DSM 10105]
Length = 199
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 65/196 (33%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG--QLDGLRT--I 57
+++ GLGNPG +Y RHN+GFMC D + K A +G L G
Sbjct: 5 WLIVGLGNPGKKYEGTRHNMGFMCADLLSQRWSVSLSDHKGLALSGKGIMSLSGRTVKFF 64
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP TFMN SG ++ + ++Y + ++ +VIHDD+DLDFG +++K GG GHNG+KS
Sbjct: 65 LAKPMTFMNDSGTAVASLCSYYGI-GADHVVVIHDDMDLDFGRIKVKQGGSAGGHNGIKS 123
Query: 118 ISEKCG-KNYKRLRIGIGRPPDT----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I G ++Y R+R+GIG I VLG F ++ L + + A + +
Sbjct: 124 IDRSLGTQDYYRVRLGIGHAQRGAAAHDKTIDWVLGGFKGSQKSELDDFLTDGADAAETI 183
Query: 173 AKREDVSFLNHIVSVR 188
S +
Sbjct: 184 IFEGIDKAQTRYNSRK 199
>gi|319901551|ref|YP_004161279.1| peptidyl-tRNA hydrolase [Bacteroides helcogenes P 36-108]
gi|319416582|gb|ADV43693.1| peptidyl-tRNA hydrolase [Bacteroides helcogenes P 36-108]
Length = 187
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM +D + + + + + G + +L+KP
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMAVDALAKDAGVS-FTDGRYGFTATLSVKGRQLLLLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STYMNLSGNAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG + VLG+F+ +R + + +
Sbjct: 121 LGTQNYARLRFGIGNEFPRGGQVDFVLGHFTDEDRKTMDEKLKTAGEIIKSFCLAGIDIT 180
Query: 181 LNHIV 185
+N
Sbjct: 181 MNQFN 185
>gi|222152207|ref|YP_002561382.1| peptidyl-tRNA hydrolase [Streptococcus uberis 0140J]
gi|254783891|sp|B9DSP2|PTH_STRU0 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|222113018|emb|CAR40326.1| peptidyl-tRNA hydrolase [Streptococcus uberis 0140J]
Length = 189
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y +HNIGFM ID I ++K F A + ++ + +K
Sbjct: 3 KMIVGLGNPGSKYDNTKHNIGFMAIDTIVKNLDINFTEEKNFKALVGSTFINQEKIYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + ++++ +VI+DDLD++ G +R + G GHNG+KSI
Sbjct: 63 PVTFMNNSGIAVKALLTYYNI-SIQDLIVIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIS 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-REDV 178
G + + R++IGIGRP +I HVLG F + + ++ + ++ + +
Sbjct: 122 HIGTQEFDRIKIGIGRPKQGMTVINHVLGKFDQDDDITIKNTLNKVDNAVNYYLQMKNFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQKYN 188
>gi|329119514|ref|ZP_08248199.1| aminoacyl-tRNA hydrolase [Neisseria bacilliformis ATCC BAA-1200]
gi|327464447|gb|EGF10747.1| aminoacyl-tRNA hydrolase [Neisseria bacilliformis ATCC BAA-1200]
Length = 190
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 71/181 (39%), Positives = 102/181 (56%), Gaps = 5/181 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILI 59
++AGLGNPG EY RHN GF +D + AWK KK+ ++ L+
Sbjct: 4 KLIAGLGNPGTEYEHTRHNAGFWFVDELARQWKA-AWKHEKKYAGHVARVSRPEGEVWLL 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+++ + FYK+ E L +HD+LDL G++R K GGG+ GHNGLK I
Sbjct: 63 KPDTYMNLSGKAVAALAQFYKIRPAE-ILTVHDELDLPCGSVRFKLGGGNGGHNGLKDIQ 121
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
K G ++ RLR+GIG P + +I HVL S+ ER + I ++PL+ +
Sbjct: 122 AKLGTPDFYRLRLGIGHPGERTLVIGHVLNKPSAAERELIDRSIGKALAAMPLIMAEDRE 181
Query: 179 S 179
+
Sbjct: 182 A 182
>gi|262407249|ref|ZP_06083797.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_1_22]
gi|262354057|gb|EEZ03149.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_1_22]
Length = 189
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 70/185 (37%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 4 YLVVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFMDGRYGFTTSFSIKGRQLILLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 64 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAI 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG + +VLG+F+ + + ++ +
Sbjct: 123 LGTQNYARLRFGIGNDFPRGGQVDYVLGHFTDEDWKTMDERLEMAGEIIKSFCLAGIDIT 182
Query: 181 LNHIV 185
+N
Sbjct: 183 MNQFN 187
>gi|15240875|ref|NP_198645.1| peptidyl-tRNA hydrolase family protein [Arabidopsis thaliana]
gi|75309164|sp|Q9FKN4|CRS2A_ARATH RecName: Full=Chloroplastic group IIB intron splicing facilitator
CRS2-A, chloroplastic; AltName: Full=CRS2-like protein
A; AltName: Full=Chloroplastic RNA splicing factor 2-A;
Flags: Precursor
gi|9758861|dbj|BAB09443.1| unnamed protein product [Arabidopsis thaliana]
gi|90962962|gb|ABE02405.1| At5g38290 [Arabidopsis thaliana]
gi|332006908|gb|AED94291.1| chloroplastic group IIB intron splicing facilitator CRS2-A
[Arabidopsis thaliana]
Length = 246
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHNIGF ID I + A + G + + +L+KP
Sbjct: 52 WLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKP 111
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q +MN SG+S+ + +Y++P L + L+I+DD+ L G LRL+ GG + HNGLK+++E
Sbjct: 112 QGYMNFSGESVGPLAAYYQIP-LRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEH 170
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ Y RL IGIG PP + +L FS ER + ++ + L +
Sbjct: 171 LNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSD 230
Query: 180 FLNHIVSVRK 189
++ +K
Sbjct: 231 SISRFNLGQK 240
>gi|78046538|ref|YP_362713.1| peptidyl-tRNA hydrolase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|119391036|sp|Q3BX00|PTH_XANC5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78034968|emb|CAJ22613.1| peptidyl tRNA hydrolase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 193
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 96/189 (50%), Gaps = 3/189 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D + A K E ++ ++ G L+KP
Sbjct: 6 LIVGLGNPGPEHAQTRHNAGFRFVDALIERSGARWALDSKLFGETAKVEVAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E+ LV HD+LDL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSITAALRFWKIEP-EHLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG + + +D LPL +
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGREDDAAIGAAVDAAIDVLPLAMEGNFNEA 184
Query: 181 LNHIVSVRK 189
+ + + +K
Sbjct: 185 MKRLHTEKK 193
>gi|299148940|ref|ZP_07042002.1| aminoacyl-tRNA hydrolase [Bacteroides sp. 3_1_23]
gi|315919653|ref|ZP_07915893.1| peptidyl-tRNA hydrolase [Bacteroides sp. D2]
gi|298513701|gb|EFI37588.1| aminoacyl-tRNA hydrolase [Bacteroides sp. 3_1_23]
gi|313693528|gb|EFS30363.1| peptidyl-tRNA hydrolase [Bacteroides sp. D2]
Length = 189
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 4 YLVVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFMDGRYGFTTSFSIKGRQLILLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 64 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG I +VLG+F+ + + ++ +
Sbjct: 123 LGTQNYARLRFGIGSDFPRGGQIDYVLGHFTDEDWKTMDERLEMAGEIIKSFCLAGIDIT 182
Query: 181 LNHIV 185
+N
Sbjct: 183 MNQFN 187
>gi|110597362|ref|ZP_01385649.1| peptidyl-tRNA hydrolase [Chlorobium ferrooxidans DSM 13031]
gi|110340906|gb|EAT59377.1| peptidyl-tRNA hydrolase [Chlorobium ferrooxidans DSM 13031]
Length = 227
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 71/188 (37%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +VAGLGNP Y RHNIGF +++I F K ++ + + + ILIK
Sbjct: 38 MKLVAGLGNPESRYTGTRHNIGFEAVEKIADFFQEGFSAGKGKYLAAKIRHEKEQVILIK 97
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG +++ MNFYK+ + LVI DDL+L G++RL++ G G NGLK I E
Sbjct: 98 PMTYMNLSGHAVVAAMNFYKIA-ASDILVICDDLNLPAGSIRLRSKGSAGGQNGLKHIIE 156
Query: 121 KCGKN-YKRLRIGIGRPPDT--AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + RLRIGI +P D VLG FS ER + ++ + A
Sbjct: 157 SLGSDEFARLRIGI-KPQDQPLGSFSSFVLGKFSEEERSVMAGVLPVCRDAALDFAVNGI 215
Query: 178 VSFLNHIV 185
+NH
Sbjct: 216 NHAMNHFN 223
>gi|71735978|ref|YP_273261.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|213967231|ref|ZP_03395380.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tomato T1]
gi|257482000|ref|ZP_05636041.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|301381033|ref|ZP_07229451.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tomato Max13]
gi|302134875|ref|ZP_07260865.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|302186451|ref|ZP_07263124.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. syringae 642]
gi|119390979|sp|Q48MW1|PTH_PSE14 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71556531|gb|AAZ35742.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|213928073|gb|EEB61619.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tomato T1]
gi|320327398|gb|EFW83412.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330881889|gb|EGH16038.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330899762|gb|EGH31181.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. japonica str.
M301072PT]
gi|330941709|gb|EGH44466.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. pisi str. 1704B]
gi|330972807|gb|EGH72873.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. aceris str.
M302273PT]
gi|330975569|gb|EGH75635.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|331018129|gb|EGH98185.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 194
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G ++RI + ++KF G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVPERKFFGLTGRFTHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLR+GIG P D + + VLG E+ L ID LP + E
Sbjct: 125 LGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNR 184
Query: 180 FLNHIVSVR 188
+ ++ S +
Sbjct: 185 AMKNLHSQK 193
>gi|303324919|pdb|3KJZ|A Chain A, Crystal Structure Of Native Peptidyl-Trna Hydrolase From
Mycobacterium Smegmatis
gi|311772055|pdb|3KK0|A Chain A, Crystal Structure Of Partially Folded Intermediate State
Of Peptidyl- Trna Hydrolase From Mycobacterium Smegmatis
gi|312208144|pdb|3P2J|A Chain A, Crystal Structure Of Peptidyl-Trna Hydrolase From
Mycobacterium Smegmatis At 2.2 A Resolution
Length = 191
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 76/187 (40%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG Y + RHN+GFM D + KK AE+ G+L G +L K
Sbjct: 5 LLVVGLGNPGPTYAKTRHNLGFMVADVLAGRIGSAFKVHKKSGAEVVTGRLAGTTVVLAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ MN SG+ + + FY +P + +VIHD+LD+DFG +RLK GGG+ GHNGL+S++
Sbjct: 65 PRISMNESGRQVGPLAKFYSVPP-QQIVVIHDELDIDFGRIRLKLGGGEGGHNGLRSVAS 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G KN+ R+RIG+GRPP VL NF+S ER + I++ A + LL +
Sbjct: 124 ALGTKNFHRVRIGVGRPPGRKDPAAFVLENFTSAERAEVPTIVEQAADATELLIAQGLEP 183
Query: 180 FLNHIVS 186
N + +
Sbjct: 184 AQNTVHA 190
>gi|157826866|ref|YP_001495930.1| peptidyl-tRNA hydrolase [Rickettsia bellii OSU 85-389]
gi|166229444|sp|A8GVL6|PTH_RICB8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157802170|gb|ABV78893.1| peptidyl-tRNA hydrolase [Rickettsia bellii OSU 85-389]
Length = 185
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 82/186 (44%), Positives = 115/186 (61%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG EY RHNIGF+ ++ I + KKKFH EI+E +G + I +
Sbjct: 1 MMLIIGLGNPGKEYEHTRHNIGFIALENIAKQYETSFSVKKKFHCEIAESTNNGQKLIFV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y +P LE VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVIAVKTYYNIP-LEKIFVIHDDIDLELGKIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
NY R+RIG+GRP ++ + +VL NFS E ID I + L+ + +
Sbjct: 120 GIIENNYHRIRIGVGRPQNSQDVADYVLNNFSKTEYVIAEQAIDKITDNFNLILENKLEE 179
Query: 180 FLNHIV 185
F + +V
Sbjct: 180 FKSKMV 185
>gi|237713463|ref|ZP_04543944.1| peptidyl-tRNA hydrolase [Bacteroides sp. D1]
gi|229446445|gb|EEO52236.1| peptidyl-tRNA hydrolase [Bacteroides sp. D1]
Length = 195
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 70/185 (37%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 10 YLVVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFMDGRYGFTTSFSIKGRQLILLKP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 70 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAI 128
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG + +VLG+F+ + + ++ +
Sbjct: 129 LGTQNYARLRFGIGNDFPRGGQVDYVLGHFTDEDWKTMDERLEMAGEIIKSFCLAGIDIT 188
Query: 181 LNHIV 185
+N
Sbjct: 189 MNQFN 193
>gi|319949665|ref|ZP_08023699.1| Peptidyl-tRNA hydrolase [Dietzia cinnamea P4]
gi|319436656|gb|EFV91742.1| Peptidyl-tRNA hydrolase [Dietzia cinnamea P4]
Length = 200
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 110/190 (57%), Gaps = 6/190 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF----FPAWKKKFHAEISEGQLDGLRTIL 58
+V GL NPG +Y RHNIG+ + + S + KK + EI++ +L G +L
Sbjct: 12 LVVGLANPGPDYEGTRHNIGWDVLQELASRALPMPASFSTHKKTNCEIAQIRLAGTPVVL 71
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+P+++MNLSG + V ++ + + +VIHD++D+DFG +RLK GGG+ GHNGL+S+
Sbjct: 72 ARPRSYMNLSGGPVAAVAKYFSVAPT-DVIVIHDEIDIDFGQVRLKRGGGEGGHNGLRSV 130
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
S G ++Y R+R G+GRPP + VL FS E+ + ++ + A ++ LL +
Sbjct: 131 SSSLGTRDYIRVRAGVGRPPGRMAVADFVLKRFSKLEQPDVPFLVQDAADAVELLLQHGL 190
Query: 178 VSFLNHIVSV 187
+ N + S
Sbjct: 191 DTAQNQVHSA 200
>gi|149921896|ref|ZP_01910340.1| peptidyl-tRNA hydrolase [Plesiocystis pacifica SIR-1]
gi|149817249|gb|EDM76726.1| peptidyl-tRNA hydrolase [Plesiocystis pacifica SIR-1]
Length = 207
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 69/193 (35%), Positives = 114/193 (59%), Gaps = 10/193 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-----FFPAWKKKFHAEISEGQLDG--L 54
+++ GLGNPG +Y +NRHN+GFM ++R H P+W+++F + + G
Sbjct: 7 WLIVGLGNPGPKYAKNRHNVGFMVVERFADRHATPGTGGPSWREQFKGKATTVHAGGSIG 66
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R ++++PQTFMNLSG+S+ +++ +P LE +V+HD++D FG + LK GGG GHNG
Sbjct: 67 RCVMLEPQTFMNLSGESVRAAADYHDVP-LERTVVVHDEIDFAFGRVALKRGGGHGGHNG 125
Query: 115 LKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
L++I + GK ++ R+R+G+ RP + VL +FS + F+ ++D R+L L
Sbjct: 126 LRNIIKHLGKPSFLRVRVGVDRPRH-GEVANWVLSDFSGEDASFVDELVDRAERALTCLL 184
Query: 174 KREDVSFLNHIVS 186
S +N
Sbjct: 185 AEGLSSAMNKFNQ 197
>gi|160892147|ref|ZP_02073150.1| hypothetical protein BACUNI_04610 [Bacteroides uniformis ATCC 8492]
gi|270296233|ref|ZP_06202433.1| peptidyl-tRNA hydrolase [Bacteroides sp. D20]
gi|317480854|ref|ZP_07939935.1| peptidyl-tRNA hydrolase [Bacteroides sp. 4_1_36]
gi|156858625|gb|EDO52056.1| hypothetical protein BACUNI_04610 [Bacteroides uniformis ATCC 8492]
gi|270273637|gb|EFA19499.1| peptidyl-tRNA hydrolase [Bacteroides sp. D20]
gi|316902939|gb|EFV24812.1| peptidyl-tRNA hydrolase [Bacteroides sp. 4_1_36]
Length = 187
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 70/185 (37%), Positives = 97/185 (52%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM +D + + + + + G + +L+KP
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMAVDALAKAAGAT-FTDGRYGFTTTLSVKGRQLLLLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN LV+ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STFMNLSGNAVRYWMQKENIP-LENVLVVVDDLALPFGTLRLKGKGSDAGHNGLKHIAST 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG I +VLG+F+ + + ++ +
Sbjct: 121 LGTQNYARLRFGIGNDFPRGGQIDYVLGHFTDEDWKTMGERLETAGEIIKSFCLAGIDIT 180
Query: 181 LNHIV 185
+N
Sbjct: 181 MNQYN 185
>gi|28868317|ref|NP_790936.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|37999393|sp|Q888C8|PTH_PSESM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|28851554|gb|AAO54631.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 194
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G ++RI + ++KF G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVPERKFFGLTGRFTHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFYRIP-IESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLR+GIG P D + + VLG E+ L ID LP + E
Sbjct: 125 LGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNR 184
Query: 180 FLNHIVSVR 188
+ ++ S +
Sbjct: 185 AMKNLHSQK 193
>gi|256821849|ref|YP_003145812.1| peptidyl-tRNA hydrolase [Kangiella koreensis DSM 16069]
gi|256795388|gb|ACV26044.1| peptidyl-tRNA hydrolase [Kangiella koreensis DSM 16069]
Length = 197
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 71/189 (37%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y RHN G ++ + + P + KFH +G +DG +L+
Sbjct: 5 KLIVGLANPGTQYDGTRHNAGAWYVEELARAYSIPLKTESKFHGLFGKGFIDGHEVMLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ V NFYK+ E LV HD+LD+D GTL+LK GGG GHNGL+
Sbjct: 65 PTTFMNLSGKAIQAVANFYKVEP-EQILVAHDELDIDPGTLKLKKGGGHGGHNGLRDTIS 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N + RLR+GIG P + + +VL S +R ++ ID R L +
Sbjct: 124 SLGNNKEFMRLRVGIGHPGHKSQVTGYVLSKPSPDDRNAIILAIDEAVRETGTLLNGDWD 183
Query: 179 SFLNHIVSV 187
++ + SV
Sbjct: 184 KAVHRLHSV 192
>gi|15674255|ref|NP_268428.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes M1 GAS]
gi|71909819|ref|YP_281369.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS5005]
gi|209558592|ref|YP_002285064.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes NZ131]
gi|306826405|ref|ZP_07459719.1| aminoacyl-tRNA hydrolase [Streptococcus pyogenes ATCC 10782]
gi|21263859|sp|Q9A206|PTH_STRP1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391018|sp|Q1JEA1|PTH_STRPB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391019|sp|Q1JP56|PTH_STRPC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391020|sp|Q1JJA3|PTH_STRPD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391022|sp|Q48VW8|PTH_STRPM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226709069|sp|B5XIP6|PTH_STRPZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|13621330|gb|AAK33150.1| putative peptidyl-tRNA hydrolase [Streptococcus pyogenes M1 GAS]
gi|71852601|gb|AAZ50624.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS5005]
gi|209539793|gb|ACI60369.1| Peptidyl-tRNA hydrolase [Streptococcus pyogenes NZ131]
gi|304431400|gb|EFM34395.1| aminoacyl-tRNA hydrolase [Streptococcus pyogenes ATCC 10782]
Length = 189
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HNIGFM ID I K F A+I ++ + +K
Sbjct: 3 KMIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + ++ + +VI+DDLD++ LRL++ G GHNG+KSI
Sbjct: 63 PTTFMNNSGIAVKALLTYYNI-DITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL-LAKREDV 178
G + + R+++GIGRP +I HV+G F++ + + +D + ++ L + +
Sbjct: 122 HIGTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQENDFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQKFN 188
>gi|227504124|ref|ZP_03934173.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
gi|227199281|gb|EEI79329.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
Length = 182
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 65/176 (36%), Positives = 104/176 (59%), Gaps = 3/176 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
F++ GLGNPG +Y RHNIGF +D I ++ KK + E++E +L + +L K
Sbjct: 4 FLIVGLGNPGPKYAGTRHNIGFDVVDEIVGQNYTNFSVHKKSNTELAETRLGSAKLVLAK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG + ++ ++ + +V+HD+L+LDFG ++ + GGGD GHNGL+S ++
Sbjct: 64 PRSFMNLSGGPIKALLQYFSINPA-QLIVVHDELELDFGVVKHRFGGGDHGHNGLRSTTK 122
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G K+Y+RL +GIGRPP VL +S E + I + A + + +
Sbjct: 123 SLGTKDYQRLSVGIGRPPGRMDPASFVLKPWSKQENAEIPIICADAADEIIRVVQE 178
>gi|224373132|ref|YP_002607504.1| peptidyl-tRNA hydrolase [Nautilia profundicola AmH]
gi|223589122|gb|ACM92858.1| peptidyl-tRNA hydrolase [Nautilia profundicola AmH]
Length = 179
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 67/172 (38%), Positives = 102/172 (59%), Gaps = 5/172 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y NRHNIGF+ ID + + F E+ + + +K
Sbjct: 1 MKLIIGLGNPGEKYKLNRHNIGFLAIDYLINEFNARKISSSFKGELFKAS----NYMFLK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S + V N+YK+ + E+ +VIHDD+DL G L+ K GG GHNGLKS+ +
Sbjct: 57 PTTYMNLSGESAVLVKNYYKI-DNEDIVVIHDDIDLKLGALKFKRGGSHGGHNGLKSLDQ 115
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G +Y R+RIG+GRP ++++VL NF+ E + + I ++ +
Sbjct: 116 HIGNDYYRVRIGVGRPERKDEVVKYVLSNFTDEEMKCMQSLFPKIKSAIEDI 167
>gi|315638228|ref|ZP_07893410.1| aminoacyl-tRNA hydrolase [Campylobacter upsaliensis JV21]
gi|315481764|gb|EFU72386.1| aminoacyl-tRNA hydrolase [Campylobacter upsaliensis JV21]
Length = 181
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 83/190 (43%), Positives = 109/190 (57%), Gaps = 12/190 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA--WKKKFHAEISEGQLDGLRTIL 58
M +V GLGN G EY RHN+GFM ID I S KF E+ + +L
Sbjct: 1 MTLVVGLGNIGREYENTRHNVGFMLIDMILSEENQARILSHSKFKGELYKIDSS----LL 56
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MN SG S+ V +FYK E +VIHDD+DL+ GTLR K GG GHNGLKSI
Sbjct: 57 LKPHTYMNHSGISVKAVCDFYKC---ERLIVIHDDIDLNLGTLRFKKGGSSGGHNGLKSI 113
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
CG NY+R+RIG+GR I HVLG F+S E+ L I+ +L L + +D+
Sbjct: 114 DHLCGNNYERVRIGVGR---GKDTISHVLGQFTSEEKVVLGEILLRAKEALFALMQGDDL 170
Query: 179 SFLNHIVSVR 188
+ ++ + S R
Sbjct: 171 AKISSLYSFR 180
>gi|19745205|ref|NP_606341.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS8232]
gi|139472893|ref|YP_001127608.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes str. Manfredo]
gi|24418601|sp|Q8P327|PTH_STRP8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052905|sp|Q5XEM3|PTH_STRP6 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119391021|sp|Q1J956|PTH_STRPF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166229458|sp|A2RBX7|PTH_STRPG RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|19747294|gb|AAL96840.1| putative peptidyl-tRNA hydrolase [Streptococcus pyogenes MGAS8232]
gi|134271139|emb|CAM29349.1| peptidyl-tRNA hydrolase [Streptococcus pyogenes str. Manfredo]
Length = 189
Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 104/187 (55%), Gaps = 4/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + +HNIGFM ID I K F A+I ++ + +K
Sbjct: 3 KMIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++ +Y + ++ + +VI+DDLD++ LRL++ G GHNG+KSI
Sbjct: 63 PTTFMNNSGIAVKALLTYYNI-DITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIA 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL-LAKREDV 178
G + + R+++GIGRP +I HV+G F++ + + +D + ++ L + +
Sbjct: 122 HIGTQEFNRIKVGIGRPLKGMTVISHVMGQFNTEDNIAISLTLDRVVNAVKFYLQENDFE 181
Query: 179 SFLNHIV 185
+
Sbjct: 182 KTMQKFN 188
>gi|170782786|ref|YP_001711120.1| peptidyl-tRNA hydrolase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157356|emb|CAQ02543.1| peptidyl-tRNA hydrolase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 195
Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 106/189 (56%), Gaps = 4/189 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTILI 59
+V GLGNPG +Y RHN+G M +D + + +A+++EG+ G + IL
Sbjct: 6 LLVVGLGNPGPQYAGTRHNVGQMALDVLADRMRATFRSHRANAQVAEGRAVPGGPKLILA 65
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP +FMNLSG + +++++ L +V HD+LD+ F +++LK GGG GHNG++ I
Sbjct: 66 KPNSFMNLSGGPVANLLSYFSLEPA-QLVVAHDELDIPFDSMKLKQGGGHGGHNGIRDII 124
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G ++ R+RIGIGRPP VL FSS ER L ++++ A ++ ++A +
Sbjct: 125 SSAGTGDFTRVRIGIGRPPGRQDAADFVLKPFSSTERQVLPNVLEDAADAVEMIASEGLI 184
Query: 179 SFLNHIVSV 187
+ +
Sbjct: 185 AAQLRFHTA 193
>gi|258647537|ref|ZP_05735006.1| aminoacyl-tRNA hydrolase [Prevotella tannerae ATCC 51259]
gi|260852317|gb|EEX72186.1| aminoacyl-tRNA hydrolase [Prevotella tannerae ATCC 51259]
Length = 213
Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 99/185 (53%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGF +D + + ++ + + ++ ++ R +L+KP
Sbjct: 29 YLIVGLGNIGDEYAETRHNIGFRVLDALATASN-LVFEDRRYGFVTNLRVKNKRLLLLKP 87
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG ++ M K+P +E LV+ DDL L FG LRL+ GG +AGHNGL+SI++
Sbjct: 88 STYMNASGNAVRYWMQKEKIP-VERVLVVVDDLALPFGALRLRAGGSEAGHNGLRSITQC 146
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + Y RLR GIG + VLG F + + ++ + A
Sbjct: 147 LGTQQYARLRFGIGNDFPRGGQVDFVLGKFGPEDLLAMPKRVEMAGEIVKSFALSGIDFT 206
Query: 181 LNHIV 185
+NH
Sbjct: 207 MNHYN 211
>gi|298485674|ref|ZP_07003753.1| Peptidyl-tRNA hydrolase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298159700|gb|EFI00742.1| Peptidyl-tRNA hydrolase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 194
Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN G ++RI + ++KF G L+ P
Sbjct: 6 LIVGLGNPGAQYEQTRHNAGAFFVERIAAAQRVNLVPERKFFGLTGRFTHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLR+GIG P D + + VLG E+ L ID LP + E
Sbjct: 125 LGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNR 184
Query: 180 FLNHIVSVR 188
+ ++ S +
Sbjct: 185 AMKNLHSQK 193
>gi|302757433|ref|XP_002962140.1| hypothetical protein SELMODRAFT_71323 [Selaginella moellendorffii]
gi|300170799|gb|EFJ37400.1| hypothetical protein SELMODRAFT_71323 [Selaginella moellendorffii]
Length = 177
Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 62/178 (34%), Positives = 102/178 (57%), Gaps = 3/178 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG ++ RHN+GF ID + + A + +G ++G+ +L+KP
Sbjct: 1 WMIVGLGNPGSKFVGTRHNVGFEAIDLLALQENIKLNTIQCKALVGKGMIEGVPVLLVKP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG ++ + +Y++ +N LVIHDD++LD +++ GG GHNG+++I E+
Sbjct: 61 QTYMNLSGDAVSPLALYYRVKP-DNILVIHDDMNLDVAAMKMVPKGGPGGHNGMRNIIER 119
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
KN RLRIGIGRPP +VL F+ E+ + + A ++ L+
Sbjct: 120 FKDNKNIPRLRIGIGRPPGAMDPKAYVLQKFTQREKVEIDVCYERGADAVRLIMSDGF 177
>gi|300813505|ref|ZP_07093847.1| aminoacyl-tRNA hydrolase [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300512384|gb|EFK39542.1| aminoacyl-tRNA hydrolase [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 192
Score = 212 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 107/187 (57%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+F++AGLGNPG +Y + +HNIGF +D+I K KF + E ++ R IL+K
Sbjct: 4 LFVIAGLGNPGKDYEKTKHNIGFSTVDKIAEKLSVNMNKIKFKGLLGETRIGQNRLILLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ ++FYK+ +++N +VI DD+D++FG L++K G HNGLKSI
Sbjct: 64 PQTFMNNSGESIRMCLDFYKV-DVKNLIVIVDDIDINFGQLKIKKEGSAGTHNGLKSIVN 122
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ R+++GIG+ + + VL NFSS + + D + + ++
Sbjct: 123 HLSSKGFPRIKVGIGQKKEGEDLANFVLSNFSSNDAKHIDKATDAARDAAIDIVEKGIEY 182
Query: 180 FLNHIVS 186
+N +
Sbjct: 183 TMNAYNN 189
>gi|148543498|ref|YP_001270868.1| peptidyl-tRNA hydrolase [Lactobacillus reuteri DSM 20016]
gi|184152906|ref|YP_001841247.1| peptidyl-tRNA hydrolase [Lactobacillus reuteri JCM 1112]
gi|167011995|sp|A5VI57|PTH_LACRD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|229485508|sp|B2G5N5|PTH_LACRJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148530532|gb|ABQ82531.1| peptidyl-tRNA hydrolase [Lactobacillus reuteri DSM 20016]
gi|183224250|dbj|BAG24767.1| aminoacyl-tRNA hydrolase [Lactobacillus reuteri JCM 1112]
Length = 186
Score = 212 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 5/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM +D++ +H K A G ++G + +L+
Sbjct: 1 MKMIVGLGNIGTRYDETRHNTGFMVVDQLARDYHLGAFTHLKQEAVAVSGVINGEKVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ ++++Y + + +V +DDLD+ G +RLKT G GHNGLKSI
Sbjct: 61 KPTTFMNDSGRAVGPLVDYYDIDLDDLVIV-NDDLDMPVGKVRLKTHGASGGHNGLKSII 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED- 177
G KN+ R+++GI P ++ HVLG FS ER ++ +L ED
Sbjct: 120 SVLGTKNFNRVKVGIDHPQH-GTVVSHVLGKFSKEERPKFDQAVEQAEHALEDWINGEDF 178
Query: 178 VSFLNHIV 185
+N
Sbjct: 179 AKLMNAYN 186
>gi|270047872|pdb|1RYB|A Chain A, Crystal Structure Of The Chloroplast Group Ii Intron
Splicing Factor Crs2
Length = 205
Score = 212 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 58/179 (32%), Positives = 99/179 (55%), Gaps = 3/179 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG++Y RHN+GF +DRI + + + + G + + +++KP
Sbjct: 18 WLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q++MN SG+++ + +Y++P L + L+I+DD L G LRL+ GG HNGL+++ E
Sbjct: 78 QSYMNYSGEAIGPLAAYYQVP-LRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEH 136
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ + RL IGIG PP +L FSS ER + ++ ++ L +
Sbjct: 137 LDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFS 195
>gi|237722655|ref|ZP_04553136.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_2_4]
gi|229448465|gb|EEO54256.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_2_4]
Length = 189
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 99/185 (53%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 4 YLVVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFMDGRYGFTTSFSIKGRQLILLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 64 STFMNLSGLAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAI 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG I +VLG+F+ + + ++ +
Sbjct: 123 LGTQNYARLRFGIGSDFPRGGQIDYVLGHFTDEDWKTMDERLEMAGEIIKSFCLAGIDIT 182
Query: 181 LNHIV 185
+N
Sbjct: 183 MNQFN 187
>gi|67458745|ref|YP_246369.1| peptidyl-tRNA hydrolase [Rickettsia felis URRWXCal2]
gi|75536798|sp|Q4UMK4|PTH_RICFE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|67004278|gb|AAY61204.1| Peptidyl-tRNA hydrolase [Rickettsia felis URRWXCal2]
Length = 185
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 85/186 (45%), Positives = 117/186 (62%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHNIGF+ I++I + + KKKF+ EI+E DG + I I
Sbjct: 1 MILVIGLGNPGKEYQYTRHNIGFIAIEKIANQYNSSFSIKKKFNCEIAETISDGQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + + + VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNIQSAK-IFVIHDDIDLETGRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+R+G+GRP + + +VL NF E L ID IA + L+ + +
Sbjct: 120 GVIGNNYNRIRVGVGRPQNNQDVADYVLNNFLKSEYETALQAIDRIANNFDLILENKLEE 179
Query: 180 FLNHIV 185
F N IV
Sbjct: 180 FKNKIV 185
>gi|319956048|ref|YP_004167311.1| peptidyl-tRNA hydrolase [Nitratifractor salsuginis DSM 16511]
gi|319418452|gb|ADV45562.1| peptidyl-tRNA hydrolase [Nitratifractor salsuginis DSM 16511]
Length = 190
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 72/170 (42%), Positives = 100/170 (58%), Gaps = 6/170 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M + GLGNPG Y + RHNIGF IDR+ KK F E+ +
Sbjct: 1 MTLYVGLGNPGPAYEKTRHNIGFRVIDRLVAETGARNISKKAFEGELYR----QGNLFFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S+ VMNF+K+ +LE+ +V+HDD+DL GT+R K GG GHNGLKSI
Sbjct: 57 KPLTYMNLSGRSIKAVMNFFKI-SLEDLVVVHDDIDLPLGTIRYKVGGSSGGHNGLKSID 115
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
E GK Y R+R+G+G+P + ++ +VL F+ E + ++D A
Sbjct: 116 EYVGKEYLRMRMGVGKPTRKSEVVSYVLAPFTPEEEAEVERLVDYAAEVA 165
>gi|317476862|ref|ZP_07936105.1| peptidyl-tRNA hydrolase [Bacteroides eggerthii 1_2_48FAA]
gi|316907037|gb|EFV28748.1| peptidyl-tRNA hydrolase [Bacteroides eggerthii 1_2_48FAA]
Length = 187
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM D + A+K + + + G + IL+KP
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMVADALAKEAGT-AFKDGRYGFTTTLSIKGRQLILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STFMNLSGNAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG + VLG+F+ + + + +
Sbjct: 121 LGTQNYARLRFGIGNDFPRGGQVDFVLGHFTDEDWKTMDERLKTAGEIIKSFCLAGIDIT 180
Query: 181 LNHIV 185
+N
Sbjct: 181 MNQFN 185
>gi|227544686|ref|ZP_03974735.1| peptidyl-tRNA hydrolase [Lactobacillus reuteri CF48-3A]
gi|300909072|ref|ZP_07126535.1| aminoacyl-tRNA hydrolase [Lactobacillus reuteri SD2112]
gi|227185332|gb|EEI65403.1| peptidyl-tRNA hydrolase [Lactobacillus reuteri CF48-3A]
gi|300894479|gb|EFK87837.1| aminoacyl-tRNA hydrolase [Lactobacillus reuteri SD2112]
Length = 205
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 67/188 (35%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM +D++ +H K A G ++G + +L+
Sbjct: 20 MKMIVGLGNIGTRYDETRHNTGFMVVDQLARDYHLGAFTHLKQEAVAVSGVINGEKVMLV 79
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ ++++Y + + +V +DDLD+ G +RLKT G GHNGLKSI
Sbjct: 80 KPTTFMNDSGRAVGPLVDYYDIDLDDLVIV-NDDLDMPVGKVRLKTHGASGGHNGLKSII 138
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-D 177
G KN+ R+++GI P ++ HVLG FS ER ++ +L E
Sbjct: 139 SALGTKNFNRVKVGIDHPQH-GTVVSHVLGKFSKEERPKFDQAVEQAEHALEDWINGENF 197
Query: 178 VSFLNHIV 185
+N
Sbjct: 198 AKLMNAYN 205
>gi|227363647|ref|ZP_03847761.1| peptidyl-tRNA hydrolase [Lactobacillus reuteri MM2-3]
gi|325681842|ref|ZP_08161361.1| aminoacyl-tRNA hydrolase [Lactobacillus reuteri MM4-1A]
gi|227071316|gb|EEI09625.1| peptidyl-tRNA hydrolase [Lactobacillus reuteri MM2-3]
gi|324978933|gb|EGC15881.1| aminoacyl-tRNA hydrolase [Lactobacillus reuteri MM4-1A]
Length = 205
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 5/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM +D++ +H K A G ++G + +L+
Sbjct: 20 MKMIVGLGNIGTRYDETRHNTGFMVVDQLARDYHLGAFTHLKQEAVAVSGVINGEKVMLV 79
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ ++++Y + + +V +DDLD+ G +RLKT G GHNGLKSI
Sbjct: 80 KPTTFMNDSGRAVGPLVDYYDIDLDDLVIV-NDDLDMPVGKVRLKTHGASGGHNGLKSII 138
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED- 177
G KN+ R+++GI P ++ HVLG FS ER ++ +L ED
Sbjct: 139 SVLGTKNFNRVKVGIDHPQH-GTVVSHVLGKFSKEERPKFDQAVEQAEHALEDWINGEDF 197
Query: 178 VSFLNHIV 185
+N
Sbjct: 198 AKLMNAYN 205
>gi|291458170|ref|ZP_06597560.1| aminoacyl-tRNA hydrolase [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291419253|gb|EFE92972.1| aminoacyl-tRNA hydrolase [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 190
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 3/191 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M+++ GLGNP Y RHN GF +D + H KF + + +L+
Sbjct: 1 MWLICGLGNPERRYIGTRHNAGFAALDLLLHELGDLKLCDTKFQGACVKTRFFEESLLLL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG+ + + NFY++P E +VI D+++L G +R++ G GHNGLKS+
Sbjct: 61 KPLTYMNESGRCIAPLSNFYRIPP-ERIIVISDEIELPPGQIRVRARGSAGGHNGLKSVV 119
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G N+ R+RIG+G P+ + +VLG E + A + + +
Sbjct: 120 SCLGTENFPRVRIGVGEKPEYMDLADYVLGKIPPDEEKTMAEAYQEAAEACLDIISKGVD 179
Query: 179 SFLNHIVSVRK 189
+N + RK
Sbjct: 180 KSMNLHNAKRK 190
>gi|194467673|ref|ZP_03073660.1| Aminoacyl-tRNA hydrolase [Lactobacillus reuteri 100-23]
gi|194454709|gb|EDX43606.1| Aminoacyl-tRNA hydrolase [Lactobacillus reuteri 100-23]
Length = 186
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 5/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM +D++ +H K A G ++G + +L+
Sbjct: 1 MKMIVGLGNIGTRYDETRHNTGFMVVDQLARDYHLGAFTHLKQEAVAVSGVINGEKVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ ++++Y + + +V +DDLD+ G +RLKT G GHNGLKSI
Sbjct: 61 KPTTFMNDSGRAVGPLVDYYDIDLDDLVIV-NDDLDMPVGKVRLKTHGASGGHNGLKSII 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED- 177
G KN+ R+++GI P ++ HVLG FS ER ++ +L ED
Sbjct: 120 SVLGTKNFNRVKVGIDHPQH-GTVVSHVLGKFSKEERPKFDQAVEQAEHALEDWINGEDF 178
Query: 178 VSFLNHIV 185
+N
Sbjct: 179 AKLMNTYN 186
>gi|332176728|gb|AEE12418.1| Peptidyl-tRNA hydrolase [Porphyromonas asaccharolytica DSM 20707]
Length = 186
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 65/185 (35%), Positives = 95/185 (51%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNP EY RHNIGF + + W H EI+ G++ ++ L+KP
Sbjct: 4 YLIVGLGNPTEEYRGTRHNIGFRMVSHLADKQG-WTWSTARHGEITSGRIKNVQLTLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M K+P +++ L+ DDL L FGTLR+K GG GHNGLK I+E
Sbjct: 63 STYMNLSGTAVRYWMQELKIP-VDHILICLDDLALPFGTLRMKPGGSAGGHNGLKHITEL 121
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + Y RLR GIG I +VL F E + +++ + +
Sbjct: 122 LGTDRYPRLRFGIGHDYPRGKQIEYVLAQFPEGELADMPRLLERVDEMIESFCLMGVERT 181
Query: 181 LNHIV 185
+N
Sbjct: 182 MNSFN 186
>gi|254427753|ref|ZP_05041460.1| peptidyl-tRNA hydrolase [Alcanivorax sp. DG881]
gi|196193922|gb|EDX88881.1| peptidyl-tRNA hydrolase [Alcanivorax sp. DG881]
Length = 195
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 97/189 (51%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G +D + + KK+ + +G L+ P
Sbjct: 7 LIVGLGNPGREYEDTRHNAGVWYVDALARRQGVFLTEDKKYFGLTATFSFEGETIRLLVP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ+ + NF+K+P + L+ HD+LDL G R K GGG GHNGL+ I +
Sbjct: 67 TTFMNRSGQATAALANFFKIP-VTQMLIAHDELDLPPGCARFKQGGGHGGHNGLRDIISR 125
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +++ RLR+GIG P + HVL S +R + ID A + + +
Sbjct: 126 HGNSRDFYRLRLGIGHPGSADRVTPHVLNKPSKADRDLIDRAIDEAAHYTADMLRGDLNG 185
Query: 180 FLNHIVSVR 188
+NH+ +
Sbjct: 186 AMNHLNGFK 194
>gi|295692137|ref|YP_003600747.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus ST1]
gi|295030243|emb|CBL49722.1| Peptidyl-tRNA hydrolase [Lactobacillus crispatus ST1]
Length = 185
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y + +HN GFM +D + K KF ++ +++G IL++
Sbjct: 1 MKIIAGLGNPGQKYDKTKHNTGFMTMDHYLNEKGLSLDKDKFEGHWTKQKINGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +V NF+K+ + + L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNESGRSVSQVANFFKV-DPADVLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGI P + A ++ VL F+ ++ + +
Sbjct: 120 DLGTEKFNRLKIGIRHPKN-ATVVSWVLTPFNDEQQKLMDDAFATSVDIIDDFISGHGSQ 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNKYN 185
>gi|189467497|ref|ZP_03016282.1| hypothetical protein BACINT_03886 [Bacteroides intestinalis DSM
17393]
gi|189435761|gb|EDV04746.1| hypothetical protein BACINT_03886 [Bacteroides intestinalis DSM
17393]
Length = 187
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 69/185 (37%), Positives = 97/185 (52%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM +D + ++ + + G + +L+KP
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMVVDALAKEAGATFNDGRY-GFTTTLSVKGRQLLLLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L+I DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STFMNLSGNAVRYWMQKENIP-LENVLIIVDDLALSFGTLRLKGKGSDAGHNGLKHIAAI 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG + +VLG+F+ ++ + + +
Sbjct: 121 LGTQNYARLRFGIGNEFPRGGQVDYVLGHFTEEDQETMDERLKTAGEIIKSFCLAGIDIT 180
Query: 181 LNHIV 185
+N
Sbjct: 181 MNQFN 185
>gi|153807758|ref|ZP_01960426.1| hypothetical protein BACCAC_02041 [Bacteroides caccae ATCC 43185]
gi|149129367|gb|EDM20581.1| hypothetical protein BACCAC_02041 [Bacteroides caccae ATCC 43185]
Length = 189
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 70/185 (37%), Positives = 98/185 (52%), Gaps = 2/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM ++ + + P + + + + G + IL+KP
Sbjct: 4 YLIVGLGNIGPEYHETRHNIGFMTVEALARINNAPPFIDGRYGFTTSFSVKGRQLILLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 64 STFMNLSGFAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAST 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG I +VLG+F+ + + + +
Sbjct: 123 LGTQNYARLRFGIGNDFPRGGQIDYVLGHFTDEDWKTMEERLATAGEIIKSFCLAGIDIT 182
Query: 181 LNHIV 185
+N
Sbjct: 183 MNQFN 187
>gi|148273453|ref|YP_001223014.1| peptidyl-tRNA hydrolase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831383|emb|CAN02341.1| putative peptidyl-tRNA hydrolase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 195
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTILI 59
+V GLGNPG +Y RHN+G M +D + + +A+++EG+ G + IL
Sbjct: 6 LLVVGLGNPGPQYAGTRHNVGQMALDVLADRMRATFRSHRSNAQVAEGRAVPGGPKLILA 65
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP +FMNLSG + ++ ++ L +V HD+LD+ F +++LK GGG GHNG++ I
Sbjct: 66 KPSSFMNLSGGPVANLLKYFSLEPA-QLVVAHDELDIPFDSMKLKQGGGHGGHNGIRDII 124
Query: 120 EKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G ++ R+RIGIGRPP VL FSS ER L ++++ A ++ ++A +
Sbjct: 125 SSAGTGDFTRVRIGIGRPPGRQDAADFVLKPFSSTERQVLPNVLEDAADAIEMIASDGLI 184
Query: 179 SFLNHIVSV 187
+ +
Sbjct: 185 AAQLRFHTA 193
>gi|21674075|ref|NP_662140.1| peptidyl-tRNA hydrolase [Chlorobium tepidum TLS]
gi|26398419|sp|Q8KD05|PTH_CHLTE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|21647228|gb|AAM72482.1| peptidyl-tRNA hydrolase [Chlorobium tepidum TLS]
Length = 187
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 63/186 (33%), Positives = 97/186 (52%), Gaps = 4/186 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP + RHNIGF ID + F + K + ++ G IL+K
Sbjct: 1 MKLIVGLGNPELRHAATRHNIGFDVIDHLAGSSTFSSG--KGNYRFTKITAPGGPLILVK 58
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG +++ MNF+K+ EN LVI DD+++ GT+R++ G G NGLK I +
Sbjct: 59 PMTYMNLSGHAVVAAMNFWKI-ERENLLVICDDVNIPLGTIRIRAKGSAGGQNGLKHIIQ 117
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + RLR+G+G A + VL F++ ER + +I A ++ A
Sbjct: 118 SLGSEEFARLRVGVGGENMPASLSSFVLSKFTAEERKCIDKVIPVCADAVLDFASLGVEH 177
Query: 180 FLNHIV 185
+
Sbjct: 178 AMTKYN 183
>gi|57168448|ref|ZP_00367582.1| peptidyl-tRNA hydrolase [Campylobacter coli RM2228]
gi|305432867|ref|ZP_07402025.1| aminoacyl-tRNA hydrolase [Campylobacter coli JV20]
gi|57020256|gb|EAL56930.1| peptidyl-tRNA hydrolase [Campylobacter coli RM2228]
gi|304444021|gb|EFM36676.1| aminoacyl-tRNA hydrolase [Campylobacter coli JV20]
Length = 180
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 75/189 (39%), Positives = 113/189 (59%), Gaps = 11/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M +V GLGN G EY + RHN+GFM ID + F KF E+ + ++L+
Sbjct: 1 MILVVGLGNIGKEYEDTRHNVGFMLIDLLLKEGNFTNLTNSKFKGELFKM----GSSLLL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG S+ V +FYK E +V+HDD+D++ G LR K GG GHNGLKSI
Sbjct: 57 KPHTYMNNSGLSVKAVNDFYKC---ERIIVVHDDIDINLGALRFKRGGSSGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG +Y+R+RIG+G+ ++I HVLG F + E L ++++ ++L L + +D+S
Sbjct: 114 NLCGSDYERVRIGVGK---GENVISHVLGKFRAEEELILSKVLEHSKKALLELIRNDDLS 170
Query: 180 FLNHIVSVR 188
++ S++
Sbjct: 171 AISSKYSLK 179
>gi|229136898|ref|ZP_04265526.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST26]
gi|228646563|gb|EEL02769.1| Peptidyl-tRNA hydrolase [Bacillus cereus BDRD-ST26]
Length = 177
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 60/137 (43%), Positives = 91/137 (66%), Gaps = 2/137 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGFM ID + ++KF G ++G + IL+K
Sbjct: 22 MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGVFGAGFVNGEKVILLK 81
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ +M++YK+ ++E+++V++DDLD+ G LRL+ G GHNG+KS
Sbjct: 82 PLTYMNLSGESIRPLMDYYKI-DVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTIS 140
Query: 121 KCG-KNYKRLRIGIGRP 136
G + ++R+R+GI RP
Sbjct: 141 HLGTQEFQRIRMGIDRP 157
>gi|94971564|ref|YP_593612.1| peptidyl-tRNA hydrolase [Candidatus Koribacter versatilis Ellin345]
gi|94553614|gb|ABF43538.1| peptidyl-tRNA hydrolase [Candidatus Koribacter versatilis Ellin345]
Length = 228
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 54/185 (29%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y HN+GF+ +DRI + + A G ++G+ +L KP
Sbjct: 29 KLIVGLGNPGMQYQFTPHNLGFLAVDRIAEKYGIRVANRNCKALTGRGVIEGVDVVLAKP 88
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+T+MNLSG S+ E+++ ++ ++ +VI+DDLDL +G++R++ G GHNG++SI
Sbjct: 89 ETYMNLSGASVQELVSELEIDGTKDMIVIYDDLDLPYGSIRVRERGSAGGHNGVQSIIGA 148
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ + R+RIGI + +VL + + +D+ A ++ ++ +
Sbjct: 149 LDTQEFLRIRIGIAPEFKLSDGASYVLSQLKKSQLPVVDQALDDAAEAVKVILREGPGPA 208
Query: 181 LNHIV 185
+N
Sbjct: 209 MNRFN 213
>gi|330873314|gb|EGH07463.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 194
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G ++RI + ++KF G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVPERKFFGLTGRFTHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLR+GIG P D + + VLG E+ L ID LP + E
Sbjct: 125 LGNQNTFHRLRLGIGHPCDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNR 184
Query: 180 FLNHIVSVR 188
+ ++ S +
Sbjct: 185 AMKNLHSQK 193
>gi|299135705|ref|ZP_07028889.1| peptidyl-tRNA hydrolase [Acidobacterium sp. MP5ACTX8]
gi|298601829|gb|EFI57983.1| peptidyl-tRNA hydrolase [Acidobacterium sp. MP5ACTX8]
Length = 198
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY HN GF+ +DRI ++ A +L G +L K
Sbjct: 1 MKLIVGLGNPGPEYAFTPHNAGFLAVDRIAEICDTQFANRRGRAVTVRTRLAGHDVLLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSG S+ ++N +L +E+ +V++D+L + GTLR++ G GHNG+KSIS
Sbjct: 61 PETFMNLSGLSVAALLNELEL-GVEDLIVLYDELAIPLGTLRIRERGSAGGHNGVKSISG 119
Query: 121 KCGK-NYKRLRIGIGRPP------DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
G + R+RIG+G+PP A ++L E L ++D R++ +
Sbjct: 120 VLGTEEWLRVRIGVGKPPLETGREVKAGGTSYLLAPMRKTELAVLDEVLDQAVRAVEAVL 179
Query: 174 KREDVSFLNHIV 185
+ + +N
Sbjct: 180 TKGVSAAMNEFN 191
>gi|323344943|ref|ZP_08085167.1| aminoacyl-tRNA hydrolase [Prevotella oralis ATCC 33269]
gi|323094213|gb|EFZ36790.1| aminoacyl-tRNA hydrolase [Prevotella oralis ATCC 33269]
Length = 191
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 63/188 (33%), Positives = 93/188 (49%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GFM +D ++ K + ++E L G + IL+KP
Sbjct: 4 YLICGLGNPGDEYVGTRHNTGFMVLDAFAKASNI-VFEDKRYGFVAETSLKGRKIILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ + + + L+I DD+ L G RLK+ G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLTKENIDQ-KRLLIISDDVALPLGAFRLKSNGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G+++ RLR+GIG VLG +S + L P ID + +
Sbjct: 122 IGQDFARLRMGIGNDYLKGGQTNWVLGRYSEEDVKTLHPSIDIAVEIIKSFVLAGTDITM 181
Query: 182 NHIVSVRK 189
N + K
Sbjct: 182 NQFNKIGK 189
>gi|222099806|ref|YP_002534374.1| Peptidyl-tRNA hydrolase [Thermotoga neapolitana DSM 4359]
gi|254783895|sp|B9K7S5|PTH_THENN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|221572196|gb|ACM23008.1| Peptidyl-tRNA hydrolase [Thermotoga neapolitana DSM 4359]
Length = 186
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 66/186 (35%), Positives = 108/186 (58%), Gaps = 6/186 (3%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
V GLGNPG Y RHN+GF+ +D + S WK + E ++ +LDG +L+KP T
Sbjct: 3 VVGLGNPGPRYAFTRHNVGFLFLDYLKSKG----WKSEKFFEWNKTELDGHEIVLVKPLT 58
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
+MNLSG ++ +M F+++ N+++ +V++DD+ L G +R++ G D GHNG+KSI + G
Sbjct: 59 YMNLSGVAMPYIMRFFRV-NVDDIIVVYDDVSLKLGKIRIRKKGSDGGHNGMKSIIQALG 117
Query: 124 -KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
+ KR+RIGIG P+ +++ VLG FS E L + + +L + ++
Sbjct: 118 TQEIKRIRIGIGEKPEGMNLVDFVLGEFSEEEFKVLQKVFELSRNALVTILNEGIDKAMS 177
Query: 183 HIVSVR 188
S+
Sbjct: 178 VYNSLE 183
>gi|325928010|ref|ZP_08189228.1| peptidyl-tRNA hydrolase [Xanthomonas perforans 91-118]
gi|325541624|gb|EGD13148.1| peptidyl-tRNA hydrolase [Xanthomonas perforans 91-118]
Length = 193
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 65/189 (34%), Positives = 94/189 (49%), Gaps = 3/189 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D + A K E ++ Q+ G L+KP
Sbjct: 6 LIVGLGNPGPEHAQTRHNAGFRFVDALIERSGARWALDSKLFGETAKVQVAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E LV HD+LDL G RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSITAALRFWKIEP-EQLLVAHDELDLAPGIARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG + + +D LPL +
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGREDDAAIGAAVDAAIDVLPLAMEGNFNEA 184
Query: 181 LNHIVSVRK 189
+ + + +K
Sbjct: 185 MKRLHTEKK 193
>gi|317507884|ref|ZP_07965582.1| peptidyl-tRNA hydrolase [Segniliparus rugosus ATCC BAA-974]
gi|316253813|gb|EFV13185.1| peptidyl-tRNA hydrolase [Segniliparus rugosus ATCC BAA-974]
Length = 181
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 61/180 (33%), Positives = 100/180 (55%), Gaps = 3/180 (1%)
Query: 8 GNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEIS-EGQLDGLRTILIKPQTFMN 66
GNPG +Y + RHN+G M +D + S K ++ + G IL KP +MN
Sbjct: 2 GNPGAKYEKTRHNVGHMVVDLLVSRAGGSFRAHKTSGMLAAQLSFHGRAVILGKPTAYMN 61
Query: 67 LSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-KN 125
+ G + ++ ++ +P + + +HD+LD+ FG +RLK GGG+AGHNGL+S+S G K+
Sbjct: 62 VCGPQIAKLARYFSVPPT-DVVAVHDELDIGFGLVRLKRGGGEAGHNGLRSLSSSLGTKD 120
Query: 126 YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIV 185
Y R+R+G+GRPP VL F++ ER L +++ A ++ L + + N +
Sbjct: 121 YARIRVGVGRPPVGMETADFVLAGFTAVERRELPDLVERSADAVEWLVREGVEAAQNRLH 180
>gi|237799720|ref|ZP_04588181.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022575|gb|EGI02632.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 194
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G ++RI + ++KF G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVPERKFFGLTGRFTHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++ +E+ LV HD+LDL G +LKTGGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFYRIA-VESILVAHDELDLPPGVAKLKTGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLR+GIG P D + + VLG E+ L ID LP + E
Sbjct: 125 LGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDILASEWNR 184
Query: 180 FLNHIVSVR 188
+ ++ S +
Sbjct: 185 AMKNLHSQK 193
>gi|222824357|ref|YP_002575931.1| peptidyl-tRNA hydrolase [Campylobacter lari RM2100]
gi|254783858|sp|B9KDP1|PTH_CAMLR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|222539578|gb|ACM64679.1| peptidyl-tRNA hydrolase [Campylobacter lari RM2100]
Length = 179
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 73/184 (39%), Positives = 102/184 (55%), Gaps = 11/184 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGN G +Y + RHN+GFM ID + KF E+ + L +
Sbjct: 1 MTLVVGLGNIGEQYAQTRHNVGFMLIDLLLKDLEVAKLSNTKFKGELFKSSLA----FFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S+ V +FYK + +VIHDD+DL+ GTL+ K GG GHNGLKSI
Sbjct: 57 KPSTYMNLSGESVKAVSDFYKC---DRIIVIHDDIDLNLGTLKFKIGGSSGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG Y+R+RIG+G+ +I HVLG F E+ L +++ ++L L K
Sbjct: 114 NLCGNAYERVRIGVGK---DQDVISHVLGKFKQEEQESLNKVLEQAKKALFELLKSNIEQ 170
Query: 180 FLNH 183
+
Sbjct: 171 VASK 174
>gi|145341531|ref|XP_001415860.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576083|gb|ABO94152.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 189
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 58/190 (30%), Positives = 102/190 (53%), Gaps = 6/190 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG ++ RHN+GF +D + K A + G+L +L KP
Sbjct: 1 WLICGLGNPGAKFAGTRHNVGFEVVDALARRAGIELTSTKHRAVLGVGKLGRSAVVLAKP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QTFMNLSG+S+ E+M +K+ ++++DDL+ G LR+KT G GHNG++S+ +
Sbjct: 61 QTFMNLSGKSVREMMRAFKIGK-SRIVIVYDDLETKLGELRMKTSGSHGGHNGVRSVIDD 119
Query: 121 --KCGKNYKRLRIGIGRPPD-TAHIIRHVLGNFSSPERYFLLPIIDNIARSL-PLLAKRE 176
+ +++ R++IGIGRP D + +VL F + + +++ +L +L +
Sbjct: 120 ATRGDRSFARVKIGIGRPKDENTAVYEYVLSRFDEDDAVKVNGAVEDAVEALQEVLLDNK 179
Query: 177 DVSFLNHIVS 186
+ +
Sbjct: 180 FGDAMTRYNT 189
>gi|224052908|ref|XP_002297632.1| predicted protein [Populus trichocarpa]
gi|222844890|gb|EEE82437.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 62/174 (35%), Positives = 87/174 (50%), Gaps = 3/174 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG ++ RHN+GF ID A EG + +L KP
Sbjct: 23 WLFVGLGNPGEKFKGTRHNVGFEMIDAFAGSLGISMNIPLCKALFGEGFVGDAPVLLAKP 82
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S + +YKLP L +V HDD++L G LRL+ GG H GLKS+
Sbjct: 83 QTYMNLSGESAGPLAAYYKLP-LNRVIVFHDDMELPCGVLRLQEKGGHGCHRGLKSVINH 141
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
+ + RLRIGIGRPP +L F++ R + + +L +
Sbjct: 142 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATARERIDAALPEGVVALRCIL 195
>gi|113953631|ref|YP_729546.1| peptidyl-tRNA hydrolase [Synechococcus sp. CC9311]
gi|119391027|sp|Q0IDC6|PTH_SYNS3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|113880982|gb|ABI45940.1| peptidyl-tRNA hydrolase [Synechococcus sp. CC9311]
Length = 207
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 102/193 (52%), Gaps = 8/193 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG+ Y RHN+GFM ++R+ S K ++++ R L+ P
Sbjct: 8 LVVGLGNPGNRYANTRHNVGFMALERLASREGGGFRSMPKLQGQLADLGSGDKRLRLLMP 67
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMN SG+S+ ++++ L LV+ DD+DL G LRL+ G GHNGLKS +
Sbjct: 68 QTFMNDSGRSIRAALDWFGF-ELHQLLVLVDDMDLPLGRLRLRARGSAGGHNGLKSTIQH 126
Query: 122 CG-KNYKRLRIGIGRPPD-----TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G +++ RLRIGIG P A + HVLG+FS E L ++ + L + +
Sbjct: 127 LGTQDFARLRIGIGAPGQNPSERKARTVSHVLGSFSRDEEPLLDKVLLEVVDGLERIQLQ 186
Query: 176 EDVSFLNHIVSVR 188
NH+ ++
Sbjct: 187 GLDLAGNHLNGLQ 199
>gi|256833156|ref|YP_003161883.1| peptidyl-tRNA hydrolase [Jonesia denitrificans DSM 20603]
gi|256686687|gb|ACV09580.1| peptidyl-tRNA hydrolase [Jonesia denitrificans DSM 20603]
Length = 205
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 110/193 (56%), Gaps = 9/193 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD-------GL 54
++ GLGNPG +Y NRHN+G M +D + + +A+++ +L G
Sbjct: 9 LLIVGLGNPGPKYAANRHNLGHMVLDVLAGRANATFTSHRSNADVARIRLGILPGGRPGP 68
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
IL KP+T+MN+SG + + +Y + + E+ +V+HD+LD+ G ++ K GGG+ GHNG
Sbjct: 69 SVILAKPRTYMNVSGGPVAALAAYYGV-DPESIIVVHDELDIPAGDIKCKIGGGEGGHNG 127
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
LK I++ G KNY R+R GIGRPP + +VL NFSS E L ++++A + L+A
Sbjct: 128 LKDITKALGTKNYIRVRGGIGRPPGRMDVADYVLKNFSSSEIKELPLFLNDLADCVELIA 187
Query: 174 KREDVSFLNHIVS 186
+ + +
Sbjct: 188 TDGVHAAQSKYHT 200
>gi|218295192|ref|ZP_03496028.1| Aminoacyl-tRNA hydrolase [Thermus aquaticus Y51MC23]
gi|218244395|gb|EED10920.1| Aminoacyl-tRNA hydrolase [Thermus aquaticus Y51MC23]
Length = 184
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 65/177 (36%), Positives = 99/177 (55%), Gaps = 11/177 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF+V G GNPG Y RHN+GFM +DR+ ++KK A ++E + + +K
Sbjct: 1 MFLVVGQGNPGEAYARTRHNVGFMVLDRL-----GLPFRKKGEALVAEARGG----LFVK 51
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+ NL+G+ + + FYK+P E LV+HD++DL G LR + GG AG+ G+ SI+E
Sbjct: 52 PLTYYNLTGRVVAPLARFYKIPP-ERILVVHDEMDLPLGRLRFRAGGSAAGNRGVASIAE 110
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G + RLRIGIG+PP +VL FS E L +++ +++ +
Sbjct: 111 ALGTTGFHRLRIGIGKPPAKELGAAYVLSPFSEEEAPILARVLEAAEKAVWCWVEEG 167
>gi|255645293|gb|ACU23143.1| unknown [Glycine max]
Length = 218
Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 89/190 (46%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG ++ RHN+GF ID P A +G + + L KP
Sbjct: 18 WLFVGLGNPGDKFKGTRHNVGFEMIDAFAESQGIPMDTVHSKAIFGKGFVGEVPVFLAKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S + +YKLP L LV HDD++L G LRL GG H GLKS+
Sbjct: 78 QTYMNLSGESTGPLAAYYKLP-LNQVLVFHDDMNLPCGVLRLHDKGGHGSHKGLKSVIYN 136
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RLRIGIG PP +L F+ R + + +L LL +
Sbjct: 137 FRGNREFPRLRIGIGSPPGQMDPKAFLLQKFNVTARQRIDEALQEGIDALKLLLSKGLTE 196
Query: 180 FLNHIVSVRK 189
+K
Sbjct: 197 SAKRFNKEQK 206
>gi|224026158|ref|ZP_03644524.1| hypothetical protein BACCOPRO_02914 [Bacteroides coprophilus DSM
18228]
gi|224019394|gb|EEF77392.1| hypothetical protein BACCOPRO_02914 [Bacteroides coprophilus DSM
18228]
Length = 187
Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 97/186 (52%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGFM +D + + + + + G + +L+KP
Sbjct: 3 YLIVGLGNIGEEYRNTRHNIGFMVLDALAKASNI-VFTDGRYGATASMSVKGRQLLLLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M K+P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STYMNLSGNAVRYWMQQEKIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG I VLG+FS + + ++ +
Sbjct: 121 LGTQNYARLRFGIGNDFPRGGQIDFVLGHFSEEDTRLMPERLEMAGEIVKSFCLAGLNIT 180
Query: 181 LNHIVS 186
+N +
Sbjct: 181 MNQYNN 186
>gi|256819861|ref|YP_003141140.1| peptidyl-tRNA hydrolase [Capnocytophaga ochracea DSM 7271]
gi|256581444|gb|ACU92579.1| peptidyl-tRNA hydrolase [Capnocytophaga ochracea DSM 7271]
Length = 188
Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 101/186 (54%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++A LGN G EY RHNIGF+ D + H +K +++E ++ G IL+KP
Sbjct: 4 YLIACLGNIGAEYANTRHNIGFLVADTLVKDHNASFTTQKL-GDLAEIKVKGRTFILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M +P LEN LVI DDL++ FGT+R+K G D GHNGLK I +
Sbjct: 63 STYMNLSGKAVRYWMEKENIP-LENLLVICDDLNIPFGTIRIKGKGSDGGHNGLKDIQAQ 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ Y RLR GI ++ I +VLG ++ E+ L + A ++
Sbjct: 122 LNTQQYARLRFGISSNFESGRQIDYVLGEWAPEEQTLLPERLQKSAEAVLSFGLAGLNIT 181
Query: 181 LNHIVS 186
+N +
Sbjct: 182 MNTFNN 187
>gi|227499515|ref|ZP_03929622.1| aminoacyl-tRNA hydrolase [Anaerococcus tetradius ATCC 35098]
gi|227218394|gb|EEI83645.1| aminoacyl-tRNA hydrolase [Anaerococcus tetradius ATCC 35098]
Length = 195
Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 62/189 (32%), Positives = 108/189 (57%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+ + GLGNPG +Y RHN+GF+ ID + H K KF + +G + G + +LIK
Sbjct: 1 MYYIVGLGNPGLQYENTRHNVGFLTIDYLARKHNIDVKKLKFKSLYGQGMISGHKVMLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ E+ +FYK + + +VI+DD+D+DFG++R++ G HNG+KSI
Sbjct: 61 PQTYMNSSGEAVRELKSFYKF-DTDKLIVIYDDIDIDFGSIRIRKKGSAGTHNGMKSIIY 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + + R+++ +G+ P + VL F+ E + I + ++ +
Sbjct: 120 QIQDDNFPRIKLAVGKKPSYMDLANFVLSGFTEKEAEIIRQEISLASCAIETIIGDSIDK 179
Query: 180 FLNHIVSVR 188
+N+ S+R
Sbjct: 180 AMNNSNSIR 188
>gi|294627825|ref|ZP_06706404.1| peptidyl-tRNA hydrolase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294666032|ref|ZP_06731294.1| peptidyl-tRNA hydrolase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292597739|gb|EFF41897.1| peptidyl-tRNA hydrolase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292604224|gb|EFF47613.1| peptidyl-tRNA hydrolase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 194
Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 65/188 (34%), Positives = 95/188 (50%), Gaps = 3/188 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D + A K E ++ ++ G L+KP
Sbjct: 6 LIVGLGNPGPEHAQTRHNAGFRFVDALIERGGARWALDSKLFGETAKVEIAGQPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E+ LV HD+LDL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSITAALRFWKIEP-EHLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG + + +D LPL +
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGREDDAAIGAAVDAAIDVLPLAMEGNFNEA 184
Query: 181 LNHIVSVR 188
+ + + R
Sbjct: 185 MKRLHTSR 192
>gi|225452074|ref|XP_002284030.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|296087264|emb|CBI33638.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG++Y RHN+GF IDRI + A I G + + +L KP
Sbjct: 52 WLIVGLGNPGNKYHGTRHNVGFEMIDRISQEEGILLNTIQSKALIGIGSIGEVPILLAKP 111
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q +MN SG+S+ + +Y++P L + LV++D+++L G LRL GG HNGLK++
Sbjct: 112 QAYMNFSGESVGPLAAYYQVP-LRHILVVYDEMNLPNGVLRLAPRGGHGYHNGLKNVMGH 170
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RL IGIG PP T + ++L FS ER + + ++ L
Sbjct: 171 LDGCREFPRLCIGIGNPPGTMDMKAYLLQKFSFEERKQIDAAQEQGIGAVRNLVLNGFNH 230
Query: 180 FLNHIVSVRK 189
+K
Sbjct: 231 STTRFNLGQK 240
>gi|255642567|gb|ACU21547.1| unknown [Glycine max]
Length = 202
Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 63/176 (35%), Positives = 87/176 (49%), Gaps = 3/176 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG ++ RHN+GF ID + P A +G + + L KP
Sbjct: 18 WLFVGLGNPGEKFKGTRHNVGFEMIDALAESQGIPMDTVHSKAISGKGFVGEVPVFLAKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S + +YKLP L LV HDD++L G LRL GG H GLKS+
Sbjct: 78 QTYMNLSGESAGPLAAYYKLP-LNQVLVFHDDMNLPCGVLRLHDKGGHGSHKGLKSVIYH 136
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+ + RLRIGIG PP +L F+ R + + +L +R
Sbjct: 137 FKGNREFPRLRIGIGSPPGQMDPKAFLLQKFNVTARQRIDEALQEGVDALSSFIQR 192
>gi|313887490|ref|ZP_07821179.1| aminoacyl-tRNA hydrolase [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923132|gb|EFR33952.1| aminoacyl-tRNA hydrolase [Porphyromonas asaccharolytica
PR426713P-I]
Length = 186
Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 65/185 (35%), Positives = 95/185 (51%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNP EY RHNIGF + + W H EI+ G++ ++ L+KP
Sbjct: 4 YLIVGLGNPTEEYRGTRHNIGFRMVSHLADKQG-WTWSTARHGEITSGRIKNVQLTLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M K+P +++ L+ DDL L FGTLR+K GG GHNGLK I+E
Sbjct: 63 STYMNLSGMAVRYWMQELKIP-VDHILICLDDLALPFGTLRMKPGGSAGGHNGLKHITEL 121
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + Y RLR GIG I +VL F E + +++ + +
Sbjct: 122 LGTDRYPRLRFGIGHDYPRGKQIEYVLAQFPEGELADMPRLLERVDEMIESFCLMGVERT 181
Query: 181 LNHIV 185
+N
Sbjct: 182 MNSFN 186
>gi|226939243|ref|YP_002794314.1| Pth [Laribacter hongkongensis HLHK9]
gi|254783873|sp|C1DBA8|PTH_LARHH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226714167|gb|ACO73305.1| Pth [Laribacter hongkongensis HLHK9]
Length = 189
Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 96/189 (50%), Gaps = 7/189 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G D+ H P + KF + + P
Sbjct: 6 LIVGLGNPGPEYAATRHNAGAWFTDQAARREHATPRLESKFFGLYAR----SGELHFVWP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+S+ V FYK+ E LV+HD+LDL G+ R K GGG GHNGL+ I
Sbjct: 62 QTYMNASGKSVAAVARFYKILP-EEILVVHDELDLPPGSARFKKGGGHGGHNGLRDIHSA 120
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLR+GIG P D + + VL S E+ + I + +LP + + + +
Sbjct: 121 LGTPDYWRLRLGIGHPGDKSQVAHFVLKPPRSEEQTLIDIAIGHALDTLPDVLRGDFPAA 180
Query: 181 LNHIVSVRK 189
+ + + K
Sbjct: 181 MKTLHTAAK 189
>gi|282891671|ref|ZP_06300158.1| hypothetical protein pah_c188o046 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498461|gb|EFB40793.1| hypothetical protein pah_c188o046 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 198
Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 68/188 (36%), Positives = 99/188 (52%), Gaps = 6/188 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG +Y RHNIGF+ + F A KF +++ + L+ P
Sbjct: 9 LFVGLGNPGKKYEMTRHNIGFLVLQAYAQQFGFTLAPDSKFKGTVAKKKFHSGEVHLLLP 68
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ++ ++FYK+P + + V+ DD DL FG +RL++ G GHNGLKSI
Sbjct: 69 ATFMNESGQAVKRYVDFYKIP-ISSMTVVVDDADLSFGAIRLRSQGSAGGHNGLKSIISH 127
Query: 122 CG-KNYKRLRIGIGRPPDTA---HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + RLR+GIGRP + + +VL NFS E L + A L L ++
Sbjct: 128 LGTTQFARLRMGIGRPDRESSLDDLADYVLDNFSQNEMPHLASFLQQGANILERLLTQDL 187
Query: 178 VSFLNHIV 185
+ +N +
Sbjct: 188 AAAMNVVN 195
>gi|224438055|ref|ZP_03658994.1| peptidyl-tRNA hydrolase [Helicobacter cinaedi CCUG 18818]
gi|313144500|ref|ZP_07806693.1| peptidyl-tRNA hydrolase [Helicobacter cinaedi CCUG 18818]
gi|313129531|gb|EFR47148.1| peptidyl-tRNA hydrolase [Helicobacter cinaedi CCUG 18818]
Length = 243
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 69/174 (39%), Positives = 100/174 (57%), Gaps = 5/174 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y + RHN+GFM +D + F A+ KKF+AE+ + +K
Sbjct: 4 LLIVGLGNPGVKYEKTRHNVGFMVLDFLSKALGFDFAFDKKFNAELGILKAYNQTLYFLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ ++ L + LVIHD+LD+ FG +R K G GHNGLKSI
Sbjct: 64 PQTFMNLSGESVAPFARYF---QLSSVLVIHDELDIPFGDIRFKFAGSSGGHNGLKSIDN 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G Y RLR GIGR T ++ +VL +FS E ++ ++ ++ A+
Sbjct: 121 TMGNEYVRLRFGIGR-SATQSVVDYVLSDFSLQEMESFHALMPHLQEAILSFAQ 173
>gi|157964746|ref|YP_001499570.1| peptidyl-tRNA hydrolase [Rickettsia massiliae MTU5]
gi|157844522|gb|ABV85023.1| Peptidyl-tRNA hydrolase [Rickettsia massiliae MTU5]
Length = 187
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 84/186 (45%), Positives = 118/186 (63%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHN+GF+ I++I + + + KKKF+ EI+E DG + I I
Sbjct: 3 MILVIGLGNPGKEYQYTRHNVGFIAIEKIANQYNSSFSTKKKFNCEIAETISDGQKIIFI 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V Y + + VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 63 KPTTYMNLSGKSVISVKTCYNIHPAK-IFVIHDDIDLETGRIKFKTGGGNGGHNGLKSID 121
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+RIG+GRP + + +VL NFS PE ++ ID + + L+ + +
Sbjct: 122 GVIGNNYNRIRIGVGRPQNNQDVADYVLNNFSKPEYETVMQAIDRVTSNFGLILENKLEE 181
Query: 180 FLNHIV 185
F N IV
Sbjct: 182 FKNKIV 187
>gi|300806899|emb|CBV36794.1| aminoacyl-tRNA hydrolase [Flavobacterium psychrophilum]
Length = 209
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 92/185 (49%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G EY RHNIGF +D + K ++E +L G +L+KP
Sbjct: 25 FLIVGLGNIGAEYVNTRHNIGFKVVDFLARQESLDFQTVKL-GSLAECKLKGRTLLLLKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M K+ EN LVI DDL+L FGT+R+K G D GHNGLKS+ +
Sbjct: 84 NTYMNLSGKAVQYWMEKEKIEK-ENVLVITDDLNLSFGTIRIKPKGSDGGHNGLKSVQQI 142
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y R R GI + +VLG + E+ L + ++ A +
Sbjct: 143 LNSSEYPRFRFGISDEFKKGKQVDYVLGEWDESEKEKLPERLKTAVEAVKTFALAGLENA 202
Query: 181 LNHIV 185
+
Sbjct: 203 MTAYN 207
>gi|68171277|ref|ZP_00544678.1| Peptidyl-tRNA hydrolase [Ehrlichia chaffeensis str. Sapulpa]
gi|88658161|ref|YP_506969.1| peptidyl-tRNA hydrolase [Ehrlichia chaffeensis str. Arkansas]
gi|119390940|sp|Q2GHW4|PTH_EHRCR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|67999292|gb|EAM85940.1| Peptidyl-tRNA hydrolase [Ehrlichia chaffeensis str. Sapulpa]
gi|88599618|gb|ABD45087.1| peptidyl-tRNA hydrolase [Ehrlichia chaffeensis str. Arkansas]
Length = 198
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 76/192 (39%), Positives = 122/192 (63%), Gaps = 7/192 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG +Y +RHN GFM +D I S +FP+++++ +A IS G + R IL+KP
Sbjct: 3 YLLAGLGNPGKKYELSRHNAGFMIVDAIASEFYFPSFRERHNALISIGNIKSHRVILVKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ + + YK+P L+N ++ HD+++++F T+R+K GG+AGHNGLKSI
Sbjct: 63 WTFMNNSGAPIMSIASLYKIP-LDNIIIFHDEVEINFCTIRVKKSGGNAGHNGLKSIDNL 121
Query: 122 CGKNYKRLRIGIGRPPDTA----HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
GK+Y R+R GIGRP + + +VL F + + I NI + LL +++
Sbjct: 122 LGKDYWRVRFGIGRPINKTNLKIDLSYYVLSQFHN--IKAVNNTILNIVEHITLLLEKKP 179
Query: 178 VSFLNHIVSVRK 189
F+ + ++ K
Sbjct: 180 SMFMEKVKNLIK 191
>gi|319441658|ref|ZP_07990814.1| peptidyl-tRNA hydrolase [Corynebacterium variabile DSM 44702]
Length = 223
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 65/188 (34%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++V GLGNPG +Y RHNIG+ +D + H A+++ +D +L++
Sbjct: 35 WMVVGLGNPGAKYAATRHNIGYRVVDELLRRHREQLIGVPGVTAKVARTGVDEHGVLLVR 94
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
T+MN +G ++ + Y +P ++ + IHD+LDL G ++++ GG + GHNGLKSISE
Sbjct: 95 SATYMNETGLAVAPLATSYAIP-ADHVIAIHDELDLPAGKVKIRIGGNENGHNGLKSISE 153
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSP--ERYFLLPIIDNIARSLPLLAKRED 177
K G ++Y R+R+GIGRP D ++ HVLG R L + A ++ ++A+R
Sbjct: 154 KLGTRDYVRIRVGIGRPSDGQSVVDHVLGRPGDGSLARELLEDAVRTAADAVEIIARRGV 213
Query: 178 VSFLNHIV 185
+ N I
Sbjct: 214 PAAQNEIH 221
>gi|218262819|ref|ZP_03477177.1| hypothetical protein PRABACTJOHN_02857 [Parabacteroides johnsonii
DSM 18315]
gi|218223114|gb|EEC95764.1| hypothetical protein PRABACTJOHN_02857 [Parabacteroides johnsonii
DSM 18315]
Length = 189
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 66/186 (35%), Positives = 97/186 (52%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF ++ + P ++++ I+ ++ I++KP
Sbjct: 5 YLITGLGNIGSEYLGTRHNIGFRVVNALAEDAGIPFTEERY-GAIARMRVKNCELIVLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ + +P +EN LV+ DDL L FGTLRLK G DAGHNGLK+I +
Sbjct: 64 NTFMNLSGNAVRYWLQKENIP-VENLLVVVDDLALPFGTLRLKPKGSDAGHNGLKNIQQL 122
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + Y RLR GIG I +VLG F E + + + +
Sbjct: 123 LGTQEYSRLRFGIGSDFPRGGQINYVLGKFPPEELQEMPDKMKRAVEIIKSFCLAGIQNT 182
Query: 181 LNHIVS 186
+N +
Sbjct: 183 MNQFNN 188
>gi|260663739|ref|ZP_05864627.1| peptidyl-tRNA hydrolase [Lactobacillus fermentum 28-3-CHN]
gi|260551790|gb|EEX24906.1| peptidyl-tRNA hydrolase [Lactobacillus fermentum 28-3-CHN]
Length = 186
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM ++++ F +K A G ++G + +L+
Sbjct: 1 MKMIVGLGNIGTRYDETRHNAGFMVVEQLARDFRLGAFTHEKVEAVTVTGLINGQKVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ +M +Y + L++ +V+ DDLD+ G ++LK G GHNGLKS+
Sbjct: 61 KPTTFMNESGRAVKPLMEYYDIA-LDDLIVVSDDLDMPVGKIKLKQRGASGGHNGLKSLI 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-ED 177
+ G + + R+++GI P ++ HVLG F + ER + ++L +
Sbjct: 120 DHLGTREFNRVKLGIDHP-KFGSVVSHVLGRFDTEERPVFEGAVLQAEQALIKWVQGTSF 178
Query: 178 VSFLNHIV 185
+N
Sbjct: 179 DQLMNEYN 186
>gi|317124067|ref|YP_004098179.1| peptidyl-tRNA hydrolase [Intrasporangium calvum DSM 43043]
gi|315588155|gb|ADU47452.1| peptidyl-tRNA hydrolase [Intrasporangium calvum DSM 43043]
Length = 194
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 74/191 (38%), Positives = 114/191 (59%), Gaps = 5/191 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQL--DGLRTIL 58
++V GLGNPG Y NRHN+G M +D + S H ++K + A + EG+ G + +L
Sbjct: 4 WLVVGLGNPGPAYAGNRHNVGAMVVDELASRHRLGSFKTHRSRARVVEGRFRVPGPKVVL 63
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
P T+MN+SG + +++++ +P LE +V+HD+LD+D G +RLK GGG+ GHNGL+SI
Sbjct: 64 AVPLTYMNVSGGPVAGLLSYFGVP-LERLVVVHDELDIDAGLVRLKVGGGEGGHNGLRSI 122
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
S+ G K+Y R+R+GIGRPP +VL +F ER L ++D A ++ L
Sbjct: 123 SQSVGSKDYHRVRVGIGRPPGRQDPADYVLRDFGKQERAELPFLLDEAADAVEALIDVGL 182
Query: 178 VSFLNHIVSVR 188
+ + R
Sbjct: 183 LDAQQRFHAPR 193
>gi|56476201|ref|YP_157790.1| peptidyl-tRNA hydrolase [Aromatoleum aromaticum EbN1]
gi|68052887|sp|Q5P722|PTH_AZOSE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56312244|emb|CAI06889.1| peptidyl-tRNA hydrolase [Aromatoleum aromaticum EbN1]
Length = 196
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 102/186 (54%), Gaps = 5/186 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG EY E RHN GF +R+ + + +FH ++ + G L+ P
Sbjct: 8 LVVGLGNPGAEYTETRHNAGFRFCERLADKLGVRFSHESRFHGFVANARDAG--VWLLMP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SGQ++ + FY++ E LV+HD+LD+ G LRLK GGG GHNGLK S
Sbjct: 66 QTYMNRSGQAVGALARFYRIAPAE-ILVVHDELDIPPGQLRLKFGGGLGGHNGLKDTSAH 124
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+Y RLRIGIG P D ++ +VL E+ + +D + P++A+ E +
Sbjct: 125 LATNDYWRLRIGIGHPGDRNEVVNYVLKPARREEQGQIDEALDRALAAWPMIARGEWNAA 184
Query: 181 LNHIVS 186
+ +
Sbjct: 185 TTRLNA 190
>gi|57242054|ref|ZP_00369994.1| peptidyl-tRNA hydrolase [Campylobacter upsaliensis RM3195]
gi|57017246|gb|EAL54027.1| peptidyl-tRNA hydrolase [Campylobacter upsaliensis RM3195]
Length = 181
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 83/190 (43%), Positives = 109/190 (57%), Gaps = 12/190 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP--AWKKKFHAEISEGQLDGLRTIL 58
M +V GLGN G EY RHN+GFM ID I S KF E+ + +L
Sbjct: 1 MTLVVGLGNIGREYENTRHNVGFMLIDMILSEENQAKILSHSKFKGELYKIDSS----LL 56
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MN SG S+ V +FYK E +VIHDD+DL+ GTLR K GG GHNGLKSI
Sbjct: 57 LKPHTYMNHSGISVKAVCDFYKC---ERLIVIHDDIDLNLGTLRFKKGGSSGGHNGLKSI 113
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
CG NY+R+RIG+GR I HVLG F+S E+ L I+ +L L + +++
Sbjct: 114 DHLCGNNYERVRIGVGR---GKDTISHVLGQFTSEEKVILGEILLRAKEALFALMQGDNL 170
Query: 179 SFLNHIVSVR 188
S ++ + S R
Sbjct: 171 SKISSLYSFR 180
>gi|315225261|ref|ZP_07867078.1| aminoacyl-tRNA hydrolase [Capnocytophaga ochracea F0287]
gi|314944944|gb|EFS96976.1| aminoacyl-tRNA hydrolase [Capnocytophaga ochracea F0287]
Length = 188
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 102/186 (54%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++A LGN G EY RHNIGF+ D + H +K +++E ++ G IL+KP
Sbjct: 4 YLIACLGNIGVEYTNTRHNIGFLVADTLVKDHNASFTTQKL-GDLAEIKVKGRTFILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M +P LEN LVI DDL++ FGT+R+K G D GHNGLK I +
Sbjct: 63 STYMNLSGKAVRYWMEKENIP-LENLLVICDDLNIPFGTIRIKGKGSDGGHNGLKDIQAQ 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ Y RLR GI ++ I +VLG ++ E+ L ++ A ++
Sbjct: 122 LNTQQYTRLRFGISSNFESGKQIDYVLGEWTPEEQTLLPERLEKCAEAVLSFGLAGLNIT 181
Query: 181 LNHIVS 186
+N +
Sbjct: 182 MNTFNN 187
>gi|302036154|ref|YP_003796476.1| aminoacyl-tRNA hydrolase [Candidatus Nitrospira defluvii]
gi|300604218|emb|CBK40550.1| Aminoacyl-tRNA hydrolase [Candidatus Nitrospira defluvii]
Length = 196
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 96/190 (50%), Gaps = 3/190 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + RHNIG I+R + +K A+ G+ L
Sbjct: 1 MRLLVGLGNPGADYADTRHNIGCWVIERAAARWSI-RLARKGAAQRGSGRAGSKLVELAS 59
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
+MNLSG L ++ L E +V+HDDLDL+ G LR++ GG GHNG+KS+ E
Sbjct: 60 TLDWMNLSGPPLKGLLRELGLTP-EALVVVHDDLDLEPGRLRIRQDGGSGGHNGIKSVIE 118
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IG+GRP +VL S+ ER P ++ +L LL R+ +
Sbjct: 119 ALGTPQFVRLKIGVGRPAPRQDSADYVLEQVSAEERAIYAPCLERAVDALELLLNRDVAT 178
Query: 180 FLNHIVSVRK 189
+N K
Sbjct: 179 AMNQFNVREK 188
>gi|225848301|ref|YP_002728464.1| peptidyl-tRNA hydrolase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643316|gb|ACN98366.1| peptidyl-tRNA hydrolase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 189
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 69/180 (38%), Positives = 99/180 (55%), Gaps = 5/180 (2%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+ GLGNPG +Y + RHN+GFM D + +K+K + I E I+ KPQ
Sbjct: 5 IIGLGNPGQKYKDTRHNVGFMVADAVAKAIKCDNKYKEKDFSHIYEC--PDYDVIIAKPQ 62
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG ++L ++ Y L E LV+HDDLDL+ GT+RL+T G GHNGLKSI
Sbjct: 63 TYMNLSGNAVLNLLEDYNLKPSE-ILVVHDDLDLNLGTIRLRTKGSSGGHNGLKSIIGMI 121
Query: 123 -GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
+ + RL+IGIGRP + +VL F+ E++ L +I + + K +
Sbjct: 122 KTEEFPRLKIGIGRPARKEEVSDYVLSPFTKEEKFVLDKVIAASTECILNVLKYGIEKSM 181
>gi|148270295|ref|YP_001244755.1| peptidyl-tRNA hydrolase [Thermotoga petrophila RKU-1]
gi|166229463|sp|A5ILV6|PTH_THEP1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|147735839|gb|ABQ47179.1| peptidyl-tRNA hydrolase [Thermotoga petrophila RKU-1]
Length = 186
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 63/186 (33%), Positives = 103/186 (55%), Gaps = 6/186 (3%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
V GLGNPG Y RHN+GF+ +D + S WK + + S +L G L+KP T
Sbjct: 3 VVGLGNPGPRYAFTRHNVGFLFLDFLKSK----DWKTEKYFAWSRIKLAGNDVALVKPLT 58
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
+MNLSG ++ V+ F+ + ++ +V++DD+ L G +R++ G D GHNG+KSI + G
Sbjct: 59 YMNLSGLAMPHVLKFFN-ASPDDIIVVYDDVSLKLGRIRIRKKGSDGGHNGMKSIIQALG 117
Query: 124 -KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
+ KR+R+GIG P+ ++ VLG FS E L + + + +L ++ ++
Sbjct: 118 TQEIKRIRVGIGDKPEGMDLVDFVLGEFSDEEWIILNKVFEVMKEALEVILIEGTEKAMS 177
Query: 183 HIVSVR 188
S+
Sbjct: 178 IYNSLE 183
>gi|329955543|ref|ZP_08296451.1| aminoacyl-tRNA hydrolase [Bacteroides clarus YIT 12056]
gi|328525946|gb|EGF52970.1| aminoacyl-tRNA hydrolase [Bacteroides clarus YIT 12056]
Length = 187
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 69/185 (37%), Positives = 95/185 (51%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM +D + ++ + + G + +L+KP
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMAVDALAKTAGATFNDGRY-GFTATISVKGRQLVLLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STFMNLSGNAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG I VLG+F+ + + + +
Sbjct: 121 LGTQNYARLRFGIGNDFPRGGQIDFVLGHFTDEDWKTMDERLKTAGEIIKSFCLAGIDIT 180
Query: 181 LNHIV 185
+N
Sbjct: 181 MNQFN 185
>gi|153952804|ref|YP_001393569.1| peptidyl-tRNA hydrolase [Clostridium kluyveri DSM 555]
gi|219853469|ref|YP_002470591.1| hypothetical protein CKR_0126 [Clostridium kluyveri NBRC 12016]
gi|189038284|sp|A5N4J0|PTH_CLOK5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783863|sp|B9DY52|PTH_CLOK1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146345685|gb|EDK32221.1| Pth [Clostridium kluyveri DSM 555]
gi|219567193|dbj|BAH05177.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 187
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 106/189 (56%), Gaps = 4/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGN G +Y RHNIGF ID + + ++KF EG + + IL+K
Sbjct: 1 MFLIVGLGNIGVKYHRTRHNIGFDFIDLVSKKYNITLNREKFKGNYGEGFIGQNKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+ E +NFYK+ N + ++I+DD+D+D G R++ G GHNG+K+I
Sbjct: 61 PGTYMNLSGESVREAVNFYKIEN-DRMIIIYDDIDIDIGRFRIRHRGSAGGHNGIKNIIL 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + + R++IGIG P ++ +VLG FS +R + ++ +L +
Sbjct: 120 NLGTDVFPRIKIGIGHP--NVDLVSYVLGKFSEDDRINIEKVLKTSVEALECIMDFGIEV 177
Query: 180 FLNHIVSVR 188
+N +
Sbjct: 178 AMNKFNGFK 186
>gi|326802494|ref|YP_004320313.1| peptidyl-tRNA hydrolase [Sphingobacterium sp. 21]
gi|326553258|gb|ADZ81643.1| Peptidyl-tRNA hydrolase [Sphingobacterium sp. 21]
Length = 186
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 69/185 (37%), Positives = 98/185 (52%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY + RHNIGFM D + K+ A SE + G +IKP
Sbjct: 3 YLIVGLGNIGQEYADTRHNIGFMVADELVKEFGAGYSTLKY-AFYSEFKHKGRTVHVIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M+ K+P + N LVI DDL + FG++R+K G AGHNGLK+I
Sbjct: 62 TTYMNLSGKAVNYWMHELKIP-ISNVLVIVDDLAIPFGSVRIKPKGSAAGHNGLKNIEAL 120
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
C G+ Y RLR GIG I +VLG F E+ L +I + ++
Sbjct: 121 CGGQQYPRLRFGIGDNYPKGRQIDYVLGPFDQEEKADLPALIAHSVEAIKSFVTVGLELT 180
Query: 181 LNHIV 185
+ +
Sbjct: 181 MTNFN 185
>gi|289627925|ref|ZP_06460879.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|330868891|gb|EGH03600.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 194
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G ++RI + ++KF G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVPERKFFGLTGHFTHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLR+GIG P D + + VLG E+ L ID LP + E
Sbjct: 125 LGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNR 184
Query: 180 FLNHIVSVR 188
+ ++ S +
Sbjct: 185 AMKNLHSQK 193
>gi|15892854|ref|NP_360568.1| peptidyl-tRNA hydrolase [Rickettsia conorii str. Malish 7]
gi|21263852|sp|Q92H41|PTH_RICCN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|15620040|gb|AAL03469.1| peptidyl-tRNA hydrolase [Rickettsia conorii str. Malish 7]
Length = 185
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 83/186 (44%), Positives = 118/186 (63%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHN+GF+ I++I + + + KKKF+ EI+E DG + I I
Sbjct: 1 MLLVIGLGNPGKEYQYTRHNVGFIAIEKIVNQYNSSFSTKKKFNCEIAETISDGQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + + VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNIYPAK-IFVIHDDIDLETGRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+RIG+GRP + + +VL +FS PE ++ ID I + L+ + +
Sbjct: 120 GVIGNNYNRIRIGVGRPQNNQGVADYVLNHFSKPEYETVMQAIDRITSNFGLILENKLEE 179
Query: 180 FLNHIV 185
F N I
Sbjct: 180 FKNKIA 185
>gi|330465679|ref|YP_004403422.1| peptidyl-tRNA hydrolase [Verrucosispora maris AB-18-032]
gi|328808650|gb|AEB42822.1| peptidyl-tRNA hydrolase [Verrucosispora maris AB-18-032]
Length = 196
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 5/188 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFH-AEISEGQL--DGLRTIL 58
++V GLGNPG EY NRHN+GFM D + + K A+++E +L G + +L
Sbjct: 8 WLVVGLGNPGREYAGNRHNVGFMVADLLADRLGVKFGRYKRAMADVAEARLGFGGPKLVL 67
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG + + F+K+P + +HD+LD+++G +R+K GGG+ GHNGL+S+
Sbjct: 68 LKPLTYMNLSGGPVASLAQFFKVP-AAQVVAVHDELDIEYGQVRVKFGGGEGGHNGLRSM 126
Query: 119 SEKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
S+ K+Y R+R GIGRPP +VL +F + ER L ++D A + + R
Sbjct: 127 SKSLATKDYVRVRFGIGRPPGRQDPADYVLSDFGAAERKELDFLVDRAADVVESVIIRGV 186
Query: 178 VSFLNHIV 185
N
Sbjct: 187 EPTQNLYH 194
>gi|167762595|ref|ZP_02434722.1| hypothetical protein BACSTE_00951 [Bacteroides stercoris ATCC
43183]
gi|167699701|gb|EDS16280.1| hypothetical protein BACSTE_00951 [Bacteroides stercoris ATCC
43183]
Length = 187
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 70/185 (37%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGN G EY E RHNIGFM +D + ++ + + G + IL+KP
Sbjct: 3 YLIAGLGNIGPEYHETRHNIGFMVVDALAQAAGITFNDGRY-GFTATMSVKGRQLILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STFMNLSGNAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG + VLG+F+ + + + +
Sbjct: 121 LGTQNYARLRFGIGNDFPRGGQVDFVLGHFTDEDWKTMDERLKTAGEIIKSFCLAGIDIT 180
Query: 181 LNHIV 185
+N
Sbjct: 181 MNQFN 185
>gi|218129917|ref|ZP_03458721.1| hypothetical protein BACEGG_01500 [Bacteroides eggerthii DSM 20697]
gi|217988027|gb|EEC54352.1| hypothetical protein BACEGG_01500 [Bacteroides eggerthii DSM 20697]
Length = 187
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM D + A+K + + + G + IL+KP
Sbjct: 3 YLIVGLGNIGPEYHETRHNIGFMVADALAKEAGT-AFKDGRYGFTTTLSIKGRQLILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STFMNLSGNAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG + VLG+F+ + + + +
Sbjct: 121 LGTQNYARLRFGIGNDFPRGGQVDFVLGHFTDEDWKTMDERLKMAGEIIKSFCLAGIDIT 180
Query: 181 LNHIV 185
+N
Sbjct: 181 MNQFN 185
>gi|313888220|ref|ZP_07821894.1| aminoacyl-tRNA hydrolase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845910|gb|EFR33297.1| aminoacyl-tRNA hydrolase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 189
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 72/187 (38%), Positives = 107/187 (57%), Gaps = 2/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+I+AGLGNPG +Y + RHN+GF ID + K KF + EG++ + IL+K
Sbjct: 1 MYIIAGLGNPGKKYEDTRHNVGFSTIDVLADKLNIKVNKIKFKGLVGEGRIGNEKVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S++E++NFYKL E+ +VI DD+D++F L++K G HNGLKSI
Sbjct: 61 PHTFMNNSGESIVEILNFYKLKP-EDLMVIVDDIDIEFAQLKIKKNGSAGTHNGLKSIVN 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ R +IG+G+ + VL NF S +R + ID A ++
Sbjct: 120 LTGSKDFARFKIGVGKKHPNEDLASFVLSNFPSKDRKHIADAIDACADAVIDAVDSGIDK 179
Query: 180 FLNHIVS 186
+N +
Sbjct: 180 SMNSYNN 186
>gi|224538933|ref|ZP_03679472.1| hypothetical protein BACCELL_03830 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519451|gb|EEF88556.1| hypothetical protein BACCELL_03830 [Bacteroides cellulosilyticus
DSM 14838]
Length = 187
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 70/185 (37%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G +Y E RHNIGFM +D + ++ + + G + +L+KP
Sbjct: 3 YLIVGLGNIGPDYHETRHNIGFMVVDALAKAAGVTFNDGRY-GFTTTLSVKGRQLLLLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ M +P LEN LVI DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STFMNLSGNAVRYWMQKENIP-LENVLVIVDDLALPFGTLRLKGKGSDAGHNGLKHIAAI 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG I +VLG+F+ + + + +
Sbjct: 121 LGTQNYARLRFGIGNEFPRGGQIDYVLGHFTDEDWKTMDERLKTAGDIIKSFCLAGIDIT 180
Query: 181 LNHIV 185
+N
Sbjct: 181 MNQFN 185
>gi|227878366|ref|ZP_03996321.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus JV-V01]
gi|256844409|ref|ZP_05549895.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus 125-2-CHN]
gi|256849203|ref|ZP_05554636.1| peptidyl-tRNA hydrolase_290 [Lactobacillus crispatus MV-1A-US]
gi|262047219|ref|ZP_06020177.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus MV-3A-US]
gi|293380356|ref|ZP_06626427.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus 214-1]
gi|312978408|ref|ZP_07790150.1| aminoacyl-tRNA hydrolase [Lactobacillus crispatus CTV-05]
gi|227862045|gb|EEJ69609.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus JV-V01]
gi|256613487|gb|EEU18690.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus 125-2-CHN]
gi|256713979|gb|EEU28967.1| peptidyl-tRNA hydrolase_290 [Lactobacillus crispatus MV-1A-US]
gi|260572464|gb|EEX29026.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus MV-3A-US]
gi|290923039|gb|EFD99970.1| peptidyl-tRNA hydrolase [Lactobacillus crispatus 214-1]
gi|310894751|gb|EFQ43823.1| aminoacyl-tRNA hydrolase [Lactobacillus crispatus CTV-05]
Length = 185
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y + +HN GFM +D + K KF ++ +++G IL++
Sbjct: 1 MKIIAGLGNPGQKYDKTKHNTGFMTMDHYLNEKGLSLDKDKFEGHWTKQKINGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMN SG+S+ +V NF+K+ + + L+I DD+D+ G +R++ G GHNG+KSI
Sbjct: 61 PQTFMNESGRSVSQVANFFKV-DPADVLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIR 119
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RL+IGI P + A ++ VL F+ ++ + +
Sbjct: 120 DLGTEKFNRLKIGIRHPKN-ATVVSWVLTPFNDEQQKLMDDAFAISVDIIDDFISGHGSQ 178
Query: 180 F-LNHIV 185
+ +N
Sbjct: 179 YLMNKYN 185
>gi|238062584|ref|ZP_04607293.1| aminoacyl-tRNA hydrolase [Micromonospora sp. ATCC 39149]
gi|237884395|gb|EEP73223.1| aminoacyl-tRNA hydrolase [Micromonospora sp. ATCC 39149]
Length = 196
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 76/188 (40%), Positives = 111/188 (59%), Gaps = 5/188 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFH-AEISEGQLD--GLRTIL 58
++V GLGNPG EY NRHN+GFM D + + + + AE++EG+L G + +L
Sbjct: 8 WLVVGLGNPGREYAGNRHNVGFMVADLLAARVGGKFGRHRRAVAEVAEGRLGFGGPKLVL 67
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG + + F+K+P + IHD+LD+ +G LR+K GGG+ GHNGL+S+
Sbjct: 68 MKPLTYMNLSGGPVAGLAQFHKVPPG-RVIAIHDELDIGYGQLRVKCGGGEGGHNGLRSM 126
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
S+ G K Y R+R GIGRPP +VL +FS+ ER L ++D A + + R
Sbjct: 127 SKSLGTKEYVRVRFGIGRPPGRQDPADYVLSDFSAAERKELEFLVDRAADVVESVVARGV 186
Query: 178 VSFLNHIV 185
N
Sbjct: 187 EPTQNQYH 194
>gi|284046683|ref|YP_003397023.1| peptidyl-tRNA hydrolase [Conexibacter woesei DSM 14684]
gi|283950904|gb|ADB53648.1| peptidyl-tRNA hydrolase [Conexibacter woesei DSM 14684]
Length = 203
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 10/185 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG-----LRT 56
++V GLGNPG +Y RHNIGF + + + P K+KF A +++G+ G R
Sbjct: 15 WLVVGLGNPGSQYAATRHNIGFEVANVLAARWQLPRAKRKFGALVTDGRTPGPTHPRPRV 74
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
++ PQT+MN SG+++ Y++P LE LV+HD++DL FG +R + GGG AGHNGLK
Sbjct: 75 AVLLPQTYMNESGRAVGPARGAYRVP-LERVLVLHDEIDLPFGDIRARIGGGLAGHNGLK 133
Query: 117 SISEKCG-KNYKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
S+ + G ++ R+RIG+ RPP D + +VLG FS P R + +I A +
Sbjct: 134 SLKRELGSPDFARVRIGVDRPPTTDPERVAGYVLGRFSEP-RADVEDLIARAADIAERIV 192
Query: 174 KREDV 178
E
Sbjct: 193 LGEIE 197
>gi|119357218|ref|YP_911862.1| peptidyl-tRNA hydrolase [Chlorobium phaeobacteroides DSM 266]
gi|166199323|sp|A1BGB1|PTH_CHLPD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119354567|gb|ABL65438.1| peptidyl-tRNA hydrolase [Chlorobium phaeobacteroides DSM 266]
Length = 190
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 64/188 (34%), Positives = 94/188 (50%), Gaps = 5/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNP Y RHN+GF +D + + K K + ++ IL+K
Sbjct: 1 MKLVVGLGNPEPRYAGTRHNVGFDVLDTLAATFQTRFGKGKGNYLSTKISHRNRSVILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG +++ MNFYK+ + L++ DDL+L G++RL+ G G NGLK I E
Sbjct: 61 PMTYMNLSGHAVVAAMNFYKV-SESGLLIVCDDLNLPAGSIRLRAKGSAGGQNGLKHIIE 119
Query: 121 KCGKN-YKRLRIGIGRPPDT--AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + RLR+GI RP D VLG F+ ER + +I + +
Sbjct: 120 CLGSEGFARLRVGI-RPLDRPLHSFSSFVLGKFTEEERIVMEKVIPVCREAALDVVVNGI 178
Query: 178 VSFLNHIV 185
+N+
Sbjct: 179 EHAMNNYN 186
>gi|289647280|ref|ZP_06478623.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. aesculi str.
2250]
Length = 194
Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 100/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G ++RI + ++KF G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVPERKFFGLTGHFTHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I+ +
Sbjct: 66 TTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDITAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLR+GIG P D + + VLG E+ L ID LP + E
Sbjct: 125 LGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNR 184
Query: 180 FLNHIVSVR 188
+ ++ S +
Sbjct: 185 AMKNLHSQK 193
>gi|154494975|ref|ZP_02033980.1| hypothetical protein PARMER_04021 [Parabacteroides merdae ATCC
43184]
gi|154085525|gb|EDN84570.1| hypothetical protein PARMER_04021 [Parabacteroides merdae ATCC
43184]
Length = 187
Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 97/186 (52%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF ++ + P ++++ I+ ++ I++KP
Sbjct: 3 YLITGLGNIGSEYLGTRHNIGFRVVNALVEDAGVPFTEERY-GAIARMRIKNCELIILKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ + +P +EN LVI DDL L FGTLRLK G DAGHNGLK+I +
Sbjct: 62 NTFMNLSGNAVRYWLQKENIP-VENLLVIVDDLALPFGTLRLKPKGSDAGHNGLKNIQQL 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + Y RLR GIG I +VLG F E + I + +
Sbjct: 121 LGTQEYSRLRFGIGSNFPRGGQINYVLGKFPPEELQEMPEKIKRAVEIIKSFCLAGVQNT 180
Query: 181 LNHIVS 186
+N +
Sbjct: 181 MNQYNN 186
>gi|288574799|ref|ZP_06393156.1| peptidyl-tRNA hydrolase [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570540|gb|EFC92097.1| peptidyl-tRNA hydrolase [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 186
Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 102/187 (54%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEI-SEGQLDGLRTILI 59
M + GLGNPG +Y + RHN+G+M +DR+ A ++KF + I +DG R L+
Sbjct: 1 MKLFVGLGNPGLKYGQTRHNVGWMVVDRLVDELALGAPQEKFKSYIWGPVLMDGERVFLM 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG+++ + + ++ + +LE+ LVI+DD+ LD G +R++ G GHNG+KSI
Sbjct: 61 KPLTYMNASGEAIRDFLRYHPV-DLEDLLVIYDDVALDVGRIRIRARGSAGGHNGMKSII 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G RLRIG+G PD ++ VLG F LL +D + L
Sbjct: 120 ACLGFSEIPRLRIGVGPKPDRIPLVDFVLGRFPEDRIPDLLSSLDRACSACRELCSNSLE 179
Query: 179 SFLNHIV 185
+N
Sbjct: 180 HVMNRFN 186
>gi|295396692|ref|ZP_06806838.1| aminoacyl-tRNA hydrolase [Brevibacterium mcbrellneri ATCC 49030]
gi|294970438|gb|EFG46367.1| aminoacyl-tRNA hydrolase [Brevibacterium mcbrellneri ATCC 49030]
Length = 194
Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 6/190 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE----GQLDGLRTI 57
+++ GLGNPG Y RHNIG M +D + K A + G + G + +
Sbjct: 3 YLIIGLGNPGPRYANTRHNIGHMVLDELARRCGATLVSTKTRALAASVGDLGGVVGTKAV 62
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L+K T+MN SG + ++ +FY + + E+ + IHDD+DL F +++LK GGG+ GHNGL+S
Sbjct: 63 LMKSATYMNESGIPVRQLADFYSI-DPEHVIAIHDDVDLPFDSIKLKLGGGEGGHNGLRS 121
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
+S+ G ++Y R+R G+GRPP +VL NFSS ER L + + A ++ L +
Sbjct: 122 MSKHLGTRDYLRVRAGVGRPPGRMDTADYVLQNFSSTERKDLPIFVSDCADAVEDLVLKG 181
Query: 177 DVSFLNHIVS 186
S
Sbjct: 182 LTEAQQRYHS 191
>gi|70732482|ref|YP_262245.1| peptidyl-tRNA hydrolase [Pseudomonas fluorescens Pf-5]
gi|68346781|gb|AAY94387.1| peptidyl-tRNA hydrolase [Pseudomonas fluorescens Pf-5]
Length = 208
Score = 210 bits (536), Expect = 6e-53, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN G + ++RI +K+ G L+
Sbjct: 19 KLIVGLGNPGTEYEQTRHNAGALFVERIAEKQGINLVADRKYFGLTGRFSHQGQDIRLLI 78
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ + F+++ E LV HD+LDL G +LKTGGG GHNGL+ I
Sbjct: 79 PTTYMNRSGQAVAALAGFFRIKP-EEILVAHDELDLPPGVAKLKTGGGHGGHNGLRDIIA 137
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G + RLR+GIG P + + VLG E+ L ID LP + E
Sbjct: 138 QLGNQNTFHRLRLGIGHPGVASMVSNFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWN 197
Query: 179 SFLNHIVSVR 188
+ ++ S +
Sbjct: 198 RAMKNLHSQK 207
>gi|331008860|gb|EGH88916.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 194
Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G ++RI + ++KF G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVPERKFFGLTGRFTHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + RLR+GIG P D + + VLG E+ L ID LP + E
Sbjct: 125 LGNQNTFHRLRLGIGPPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNR 184
Query: 180 FLNHIVSVR 188
+ ++ S +
Sbjct: 185 AMKNLHSQK 193
>gi|311746127|ref|ZP_07719912.1| aminoacyl-tRNA hydrolase [Algoriphagus sp. PR1]
gi|126576348|gb|EAZ80626.1| aminoacyl-tRNA hydrolase [Algoriphagus sp. PR1]
Length = 186
Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 97/186 (52%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF+ +DR+ WK A +E + G LIKP
Sbjct: 3 YLLVGLGNIGPEYELTRHNIGFLTVDRLAEKEN-LTWKSDRLAFKTEYKFKGRSIHLIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M ++P EN L+I D++ L FG LR+K G AGHNGLK+I
Sbjct: 62 TTYMNLSGKAVNYWMKELQIPK-ENILIIVDEVALPFGKLRMKPKGSAAGHNGLKNIEAL 120
Query: 122 -CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+NY RLR+GIG + +VLG F+ E L I+D
Sbjct: 121 TGGQNYPRLRMGIGDDFPKGRQVDYVLGKFTQEEFDQLPEIMDQAIDMSLAFCTIGIQHT 180
Query: 181 LNHIVS 186
+N +
Sbjct: 181 MNQFNN 186
>gi|159902816|ref|YP_001550160.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9211]
gi|159887992|gb|ABX08206.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9211]
Length = 206
Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 66/192 (34%), Positives = 108/192 (56%), Gaps = 8/192 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GFM ++++ + KK +++E + + L+ P
Sbjct: 9 LLVGLGNPGSKYSSTRHNVGFMVLEKLATKECASFSTSKKLFGQLAEIGIGAQKRRLLMP 68
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+++ M+++ L + L+I DD+DL G LRL+ GG GHNGLKSI
Sbjct: 69 DTYMNESGRAVKAAMHWFGL-QPNHILIIVDDIDLPLGKLRLRYQGGAGGHNGLKSIINN 127
Query: 122 CG-KNYKRLRIGIGRP-----PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G +N+ RLR+GIG+P + HVLG F+S E+ + +++ + L L+ +
Sbjct: 128 LGTQNFSRLRVGIGKPVIAFEEKQVRTVSHVLGAFNSKEQLVMQSVLNEVVLGLNLIQEV 187
Query: 176 EDVSFLNHIVSV 187
NH+ S+
Sbjct: 188 GLEKAANHLNSM 199
>gi|183601452|ref|ZP_02962822.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
HN019]
gi|219683507|ref|YP_002469890.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
AD011]
gi|241191048|ref|YP_002968442.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241196454|ref|YP_002970009.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|254783852|sp|B8DTI5|PTH_BIFA0 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|183219058|gb|EDT89699.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
HN019]
gi|219621157|gb|ACL29314.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
AD011]
gi|240249440|gb|ACS46380.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240251008|gb|ACS47947.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|295794037|gb|ADG33572.1| peptidyl-tRNA hydrolase [Bifidobacterium animalis subsp. lactis V9]
Length = 199
Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 63/194 (32%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG--QLDGL--RTI 57
+++ GLGNPG +Y RHN+GFM ++ + K A++ +G L+G +
Sbjct: 6 WLIVGLGNPGAKYRNTRHNMGFMTVNELAKRWSIHFANHKGLADLGKGTMSLNGQTAKVF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SGQ++ + +Y + NL++ +VIHDD+DL+FG ++LK+GG GHNG+KS
Sbjct: 66 LCKPLTYMNDSGQAVQSIREYYHI-NLDHIVVIHDDMDLEFGRIKLKSGGSAGGHNGIKS 124
Query: 118 ISEKC-GKNYKRLRIGIGRPPDTAH----IIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I +Y R+R+G+G + I VLG F++ +R L + + A + +
Sbjct: 125 IDRCLHSPDYARVRMGVGHASRSGDAHDNTINWVLGEFNAAQRKQLPEFLADGADAAETI 184
Query: 173 AKREDVSFLNHIVS 186
+ +
Sbjct: 185 VFEGLTKAQDKFNA 198
>gi|188584705|ref|YP_001916250.1| Aminoacyl-tRNA hydrolase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349392|gb|ACB83662.1| Aminoacyl-tRNA hydrolase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 207
Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 72/189 (38%), Positives = 110/189 (58%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y N+HNIGFM ID H K K + E +L+G + +LIK
Sbjct: 19 MKLIAGLGNPGKKYQYNKHNIGFMVIDYFAKQHGLSVTKLKHQSMWDELRLEGEKIVLIK 78
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ +++K+ N ++ L+I+DDLDL+ G LR++ GG GHNGLKSI
Sbjct: 79 PLTYMNRSGHAIKLWKDYFKIEN-QDLLIIYDDLDLELGDLRMRPKGGTGGHNGLKSIVS 137
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
GK + R+R GIGRP +VL +F+ E + ++++ + L K
Sbjct: 138 TLGGKEFPRIRFGIGRPASQESTSSYVLKDFTKKEFETINNKFPDLSKGIELFCKEGINE 197
Query: 180 FLNHIVSVR 188
+N + S++
Sbjct: 198 AMNFVNSLQ 206
>gi|328952986|ref|YP_004370320.1| Peptidyl-tRNA hydrolase [Desulfobacca acetoxidans DSM 11109]
gi|328453310|gb|AEB09139.1| Peptidyl-tRNA hydrolase [Desulfobacca acetoxidans DSM 11109]
Length = 199
Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNPG Y RHN+GF ID + + A+ G G +L +
Sbjct: 1 MQLFIGLGNPGFRYKRTRHNVGFQIIDVLSQRWGISLNRHTCSAQWGRGGWAGQEVVLAQ 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MNLSG+++ ++ F++L + + L+IHDDLDL G L+ GG GH G+ SI
Sbjct: 61 PETYMNLSGRAVFRLLAFFQL-SAADLLIIHDDLDLPLGRLKFVLRGGAGGHRGVASIIN 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ RL++GIGRP + +VL E +ID A +L + K
Sbjct: 120 TIHTTEFLRLKVGIGRPQYGETVENYVLSPCYPAEIDTYASMIDRTADALEAVLKVGLNQ 179
Query: 180 FLNHIV 185
++
Sbjct: 180 AMSLFH 185
>gi|289678417|ref|ZP_06499307.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. syringae FF5]
Length = 188
Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 68/188 (36%), Positives = 98/188 (52%), Gaps = 4/188 (2%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKPQ 62
+ GLGNPG EY + RHN G ++RI + ++KF G L+ P
Sbjct: 1 IVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVPERKFFGLTGRFTHQGQDVRLLIPT 60
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 61 TYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQL 119
Query: 123 GKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P D + + VLG E+ L ID LP + E
Sbjct: 120 GNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNRA 179
Query: 181 LNHIVSVR 188
+ ++ S +
Sbjct: 180 MKNLHSQK 187
>gi|291514752|emb|CBK63962.1| peptidyl-tRNA hydrolase [Alistipes shahii WAL 8301]
Length = 187
Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGF +D + + + + +++E + G +L+KP
Sbjct: 3 YLIVGLGNIGAEYAETRHNIGFNVLDALAEASNT-VFTTQRYGDVAEAKYKGRTLVLLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M+ K+P EN LV+ DD+ L FGTLRL+ G GHNGLK+ISE
Sbjct: 62 STYMNLSGKAVRYWMDAGKIPP-ENLLVVSDDIALPFGTLRLRPKGSAGGHNGLKNISEL 120
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y R+R G+G H + +VLG ++ ER L + ++ A
Sbjct: 121 LGTEEYARMRFGVGGDFPKGHQVEYVLGEWTDEERKALPERLKVFVDAIRSFATVGTQLT 180
Query: 181 LNHIV 185
+ +
Sbjct: 181 MTNFN 185
>gi|83320028|ref|YP_424097.1| peptidyl-tRNA hydrolase [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
gi|119390961|sp|Q2ST16|PTH_MYCCT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|83283914|gb|ABC01846.1| peptidyl-tRNA hydrolase [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 186
Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY + RHN GF+ ID + + + + K++F++ + ++ + + +K
Sbjct: 1 MKVIIGLGNIGKEYEKTRHNAGFIAIDLLLEKYKYNSIKEEFNSLVYTSIINNQKVLFVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +++NFYK+ +L + +VIHDD DL+ ++ K G AGHNG+KSI
Sbjct: 61 PLTFMNNSGLTVKQIINFYKI-DLNDLIVIHDDKDLNISRIQFKKDGSSAGHNGIKSIIN 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ RLRIGI +P + I+ VL FS E L +N + + + +
Sbjct: 120 NLNTQDFYRLRIGINKPANQWKIVDWVLSKFSDDELNLLKESFNNKSEFINDFTNNKTFT 179
Query: 180 F-LNHIV 185
+ +N
Sbjct: 180 YLMNKYN 186
>gi|85859732|ref|YP_461934.1| peptidyl-tRNA hydrolase [Syntrophus aciditrophicus SB]
gi|119391023|sp|Q2LUK5|PTH_SYNAS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|85722823|gb|ABC77766.1| peptidyl-tRNA hydrolase [Syntrophus aciditrophicus SB]
Length = 196
Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 71/188 (37%), Positives = 107/188 (56%), Gaps = 2/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y RHN GF +D++ + F A +G + G +L K
Sbjct: 1 MKLIVGLGNPGARYRFTRHNFGFFVLDQLAEDQDIMMSQTGFDALWGKGVIAGQSVLLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+ ++ +F+K+ +E+ LV+HDDLDL FG +RLK GGG GH GL SI +
Sbjct: 61 PQTFMNLSGKSVRKLADFFKIV-VEDVLVVHDDLDLPFGVIRLKAGGGQGGHKGLISICD 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++R+R+GIG+P + + R+VL F+ E L II ++ + +
Sbjct: 120 SLGGPEFQRVRLGIGKPAQRSAVERYVLEPFTESELRILPRIIVTARSAILEVISSGIKT 179
Query: 180 FLNHIVSV 187
+N +
Sbjct: 180 AMNSYNGM 187
>gi|167753866|ref|ZP_02425993.1| hypothetical protein ALIPUT_02151 [Alistipes putredinis DSM 17216]
gi|167658491|gb|EDS02621.1| hypothetical protein ALIPUT_02151 [Alistipes putredinis DSM 17216]
Length = 187
Score = 210 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 62/182 (34%), Positives = 99/182 (54%), Gaps = 3/182 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY + RHNIGF +D + ++ ++ + G +L+KP
Sbjct: 3 YLIVGLGNIGAEYADTRHNIGFDVLDALAEASNTSFTTDRY-GAVATLRSKGHTLVLLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ ++ K+P EN LV+ DD+ L FGT R++T G GHNGLK+I+E
Sbjct: 62 STYMNLSGKAVRYWLDAEKIPR-ENLLVVVDDIALPFGTFRMRTKGSAGGHNGLKNITEL 120
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y R+R GIG H + +VLG+++ ER + + ++ A
Sbjct: 121 LGTEEYSRIRFGIGGDFPRGHQVDYVLGHWNDEERKAMPERLKYFGDAILSFAAIGPERT 180
Query: 181 LN 182
+N
Sbjct: 181 MN 182
>gi|79517018|ref|NP_197484.4| aminoacyl-tRNA hydrolase [Arabidopsis thaliana]
gi|75291353|sp|Q6NLS8|PTHM_ARATH RecName: Full=Peptidyl-tRNA hydrolase, mitochondrial; AltName:
Full=M-PTH; AltName: Full=Mitochondrial CRS2-like
protein; AltName: Full=Mitochondrial RNA splicing
factor; Flags: Precursor
gi|44681342|gb|AAS47611.1| At5g19830 [Arabidopsis thaliana]
gi|45773870|gb|AAS76739.1| At5g19830 [Arabidopsis thaliana]
gi|110735763|dbj|BAE99859.1| peptidyl tRNA hydrolases-like putative protein [Arabidopsis
thaliana]
gi|332005370|gb|AED92753.1| Peptidyl-tRNA hydrolase [Arabidopsis thaliana]
Length = 219
Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats.
Identities = 70/180 (38%), Positives = 94/180 (52%), Gaps = 3/180 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHNIGF ID F A + +G + L IL KP
Sbjct: 19 WLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILAKP 78
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S + +YKLP L LV+HDD+ L G LRL+ GG HNGLKS+
Sbjct: 79 QTYMNLSGESSGPLAAYYKLP-LNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNH 137
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RLRIGIG+PP +L FS P R + + +L L+ ++
Sbjct: 138 FRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDFGE 197
>gi|116783352|gb|ABK22906.1| unknown [Picea sitchensis]
Length = 246
Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 3/190 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF ID I + + I +G + +L KP
Sbjct: 52 WLLIGLGNPGKKYEGTRHNVGFEMIDSIAKAEGISLNAIQSKSLIGKGYICNTPVLLAKP 111
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT++NL+G+S+ + +Y++P ++ L++ D ++L G LR++ GG HNG+KS+
Sbjct: 112 QTYINLTGESVGSLAVYYRIP-FQHILLMFDMMELPSGILRIQAKGGHGLHNGVKSVINH 170
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+N+ RL IGIG PP + +VL FS+ ER + + + LL
Sbjct: 171 LKGNRNFPRLCIGIGNPPGSMDSKAYVLQQFSTMEREKMNISLQEGVDATRLLISEGFSQ 230
Query: 180 FLNHIVSVRK 189
++ +K
Sbjct: 231 SIDGFNKRQK 240
>gi|228469893|ref|ZP_04054832.1| peptidyl-tRNA hydrolase [Porphyromonas uenonis 60-3]
gi|228308528|gb|EEK17316.1| peptidyl-tRNA hydrolase [Porphyromonas uenonis 60-3]
Length = 186
Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats.
Identities = 67/185 (36%), Positives = 94/185 (50%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNP EY RHNIGF + + W H EI+ G++ ++ L+KP
Sbjct: 4 YLIVGLGNPTEEYRGTRHNIGFRMVSHLADQQG-WTWSTARHGEIASGRIKNVQLTLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M K+P +EN L+ DDL L FGTLR+K GG GHNGLK I+E
Sbjct: 63 STYMNLSGTAVRYWMRELKVP-IENILICLDDLALPFGTLRMKPGGSAGGHNGLKHITEL 121
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + Y RLR GIG I +VL F E + +++ +
Sbjct: 122 LGTDRYPRLRFGIGHDYPRGKQIEYVLAQFPEGELADMPRLLERTDEMIQSFCLVGVERT 181
Query: 181 LNHIV 185
+N
Sbjct: 182 MNSFN 186
>gi|254455414|ref|ZP_05068843.1| peptidyl-tRNA hydrolase [Candidatus Pelagibacter sp. HTCC7211]
gi|207082416|gb|EDZ59842.1| peptidyl-tRNA hydrolase [Candidatus Pelagibacter sp. HTCC7211]
Length = 186
Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats.
Identities = 71/186 (38%), Positives = 106/186 (56%), Gaps = 1/186 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGNP + NRHN+GF ID I+ K KF ++ G + + IK
Sbjct: 1 MLLFVGLGNPTPDSENNRHNVGFKIIDSINKKFGLSKQKPKFKGLLTTGNVGDQKVYAIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + E++ ++K+ + E+ +V HDDLD++FG ++ K GG AGHNG+ SI +
Sbjct: 61 PLTFMNNSGICIRELIEYFKI-DAEDVIVFHDDLDVEFGKIKAKYGGSSAGHNGIASIDK 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
GK Y R+RIGIG+P + + VL NF E + I +NI S+ LL ++ F
Sbjct: 120 FIGKEYSRVRIGIGKPKENIKVGDFVLQNFDEDEMPGIEKISNNIIESISLLVDKKLDLF 179
Query: 181 LNHIVS 186
+ + +
Sbjct: 180 SSTVNN 185
>gi|284989493|ref|YP_003408047.1| peptidyl-tRNA hydrolase [Geodermatophilus obscurus DSM 43160]
gi|284062738|gb|ADB73676.1| peptidyl-tRNA hydrolase [Geodermatophilus obscurus DSM 43160]
Length = 195
Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats.
Identities = 71/188 (37%), Positives = 108/188 (57%), Gaps = 5/188 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF---PAWKKKFHAEISEGQLDGLRTIL 58
F+V GLGNPG Y NRHN+G M +D + + P K+ I EG+L G R +L
Sbjct: 6 FLVVGLGNPGPSYAGNRHNVGAMVLDELAARAGVKLSPGKGKRARTLIGEGRLAGRRVVL 65
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+P ++MN SG + +++++ +P + +V+HD+LD+ F +RLK GGG+ GHNGL+SI
Sbjct: 66 ARPTSYMNESGGPVRGLLDYHSIPPT-DLVVLHDELDIPFAGVRLKRGGGEGGHNGLRSI 124
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+ G K+Y R+R+GIGRPP VL +FS+ ER L ++ A + L
Sbjct: 125 TRSTGTKDYLRVRVGIGRPPGRQDPADFVLKDFSATERKELDLLVAEAADATEELLALGL 184
Query: 178 VSFLNHIV 185
+ N +
Sbjct: 185 EAAQNVVH 192
>gi|297808049|ref|XP_002871908.1| aminoacyl-tRNA hydrolase [Arabidopsis lyrata subsp. lyrata]
gi|297317745|gb|EFH48167.1| aminoacyl-tRNA hydrolase [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats.
Identities = 71/180 (39%), Positives = 94/180 (52%), Gaps = 3/180 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHNIGF ID F A + +G +D L IL KP
Sbjct: 18 WLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVDDLPVILAKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S + +YKLP L LV+HDD+ L G LRL+ GG HNGLKS+
Sbjct: 78 QTYMNLSGESSGPLAAYYKLP-LNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNH 136
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RLRIGIG PP +L FS P R + + +L L+ ++
Sbjct: 137 FRGNREFARLRIGIGNPPGQMDPKAFLLQKFSVPARERMDKALAEGVDALKLVLSKDFGE 196
>gi|198277114|ref|ZP_03209645.1| hypothetical protein BACPLE_03322 [Bacteroides plebeius DSM 17135]
gi|198269612|gb|EDY93882.1| hypothetical protein BACPLE_03322 [Bacteroides plebeius DSM 17135]
Length = 187
Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats.
Identities = 71/186 (38%), Positives = 97/186 (52%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHNIGFM +D + + + ++ L G + IL+KP
Sbjct: 3 YLIVGLGNIGEEYRETRHNIGFMVLDALAKASNI-VFSDGRYGATAQLSLKGRQLILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M K+P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STYMNLSGNAVRYWMQQEKIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +NY RLR GIG I VLG+F + ++ +
Sbjct: 121 LGTQNYARLRFGIGNDFPKGGQIDFVLGHFDEESMKLMPERLEVAQEIIKSFCLAGLNIT 180
Query: 181 LNHIVS 186
+N +
Sbjct: 181 MNQYNN 186
>gi|332038114|gb|EGI74561.1| peptidyl-tRNA hydrolase [Pseudoalteromonas haloplanktis ANT/505]
Length = 194
Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats.
Identities = 69/189 (36%), Positives = 104/189 (55%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G I++I + + K+H + + G L+ P
Sbjct: 6 MLVGLANPGPEYANTRHNAGAWFIEQIAARYNCTLKHDPKYHGLTGKVIIQGQEFKLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + NF+K+P +E+ LV HD+LDLD G +LK GGG GHNGLK I K
Sbjct: 66 TTYMNLSGKAVSSLANFFKIP-VEDILVAHDELDLDPGVAKLKKGGGHGGHNGLKDIIAK 124
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K++ RLRIG+G P + VLG + ++ + +D R + +LAK +
Sbjct: 125 MANQKDFMRLRIGVGHPGHREMVTGWVLGKAAKEDQEKMDAAVDEAVRCMEILAKDGVLK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 AQNRLHSFK 193
>gi|226307813|ref|YP_002767773.1| peptidyl-tRNA hydrolase [Rhodococcus erythropolis PR4]
gi|229494924|ref|ZP_04388675.1| peptidyl-tRNA hydrolase [Rhodococcus erythropolis SK121]
gi|259535232|sp|C1A349|PTH_RHOE4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226186930|dbj|BAH35034.1| peptidyl-tRNA hydrolase [Rhodococcus erythropolis PR4]
gi|229318148|gb|EEN84018.1| peptidyl-tRNA hydrolase [Rhodococcus erythropolis SK121]
Length = 190
Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats.
Identities = 81/185 (43%), Positives = 112/185 (60%), Gaps = 3/185 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y + RHN+GFM + KK AEI EG+L G R IL KP
Sbjct: 7 LVIGLGNPGPQYEKTRHNVGFMVAGTLAGRMGGKFNVHKKSGAEIVEGRLAGRRVILGKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+++MNLSG ++ + F+ + + N +V+HD+LDLDFGT+RLK GGG+ GHNGL+SIS
Sbjct: 67 RSYMNLSGGAVAGLARFFSV-DAANIIVVHDELDLDFGTIRLKLGGGEGGHNGLRSISSS 125
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
K+Y R R+GIGRPP +VL FSS ER L + + A ++ LL + +
Sbjct: 126 LTTKDYLRTRVGIGRPPGRMDPADYVLKPFSSTERKELDLVCEEAADAVELLLELGLEAA 185
Query: 181 LNHIV 185
N +
Sbjct: 186 QNRLH 190
>gi|330887872|gb|EGH20533.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. mori str. 301020]
Length = 194
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G ++RI + ++KF G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVPERKFFGLTGRFTHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ RLR+GIG P D + + VLG E+ L ID LP + E
Sbjct: 125 LRNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNR 184
Query: 180 FLNHIVSVR 188
+ ++ S +
Sbjct: 185 AMKNLHSQK 193
>gi|50364892|ref|YP_053317.1| peptidyl-tRNA hydrolase [Mesoplasma florum L1]
gi|68052954|sp|Q6F240|PTH_MESFL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|50363448|gb|AAT75433.1| peptidyl-tRNA hydrolase [Mesoplasma florum L1]
Length = 186
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 57/184 (30%), Positives = 101/184 (54%), Gaps = 3/184 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G +Y RHN G++ +D++ + F K + ++ I ++ + + +K
Sbjct: 1 MKLIVGLGNYGSQYEATRHNAGWIALDQLIEKYGFTQQKNEHNSIIFFSTVNNEKVLFVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG ++ +M++YK+ +++ +++HD+ D G + K G AGHNG+KS+ +
Sbjct: 61 PQTYMNNSGIAIQAIMHYYKI-EIKDLVILHDEKDFPVGKNQFKMNGSAAGHNGIKSVIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +N+ R RIGIG+P II VL F E ++ +I+ + K
Sbjct: 120 YLGTQNFNRYRIGIGQPEQGWKIIDWVLSKFKPEELENIILASKSISNFVNDWTKGTTFQ 179
Query: 180 -FLN 182
+N
Sbjct: 180 NIMN 183
>gi|325921464|ref|ZP_08183319.1| peptidyl-tRNA hydrolase [Xanthomonas gardneri ATCC 19865]
gi|325548011|gb|EGD19010.1| peptidyl-tRNA hydrolase [Xanthomonas gardneri ATCC 19865]
Length = 192
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 64/188 (34%), Positives = 94/188 (50%), Gaps = 3/188 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ + RHN GF +D + H K E ++ ++ G L+KP
Sbjct: 6 LIVGLGNPGPEHAQTRHNAGFRFVDALVERHGARWGLDAKLFGETAKVEIAGHPVWLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+S+ + F+K+ E LV HD+LDL GT RLK GG G NGL+
Sbjct: 66 ATFMNLSGKSITAALRFWKIEP-EQLLVAHDELDLAPGTARLKFDGGHGGQNGLRDTIRL 124
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG P ++ VLG + + +D LPL +
Sbjct: 125 LGHGKFHRLRVGIGHPGHKDRVVPWVLGRAGRDDDAAIGAAVDAAIDVLPLAVEGNFNEA 184
Query: 181 LNHIVSVR 188
+ + + +
Sbjct: 185 MKRLHTEK 192
>gi|312897815|ref|ZP_07757231.1| peptidyl-tRNA hydrolase [Megasphaera micronuciformis F0359]
gi|310621199|gb|EFQ04743.1| peptidyl-tRNA hydrolase [Megasphaera micronuciformis F0359]
Length = 187
Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 65/183 (35%), Positives = 102/183 (55%), Gaps = 1/183 (0%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++AGLGNPG EY ++HN GF ID + W+ + AE++ +DG + +L+KPQ
Sbjct: 1 MIAGLGNPGREYEGSKHNAGFTVIDELARRWGVNTWQTRMDAEVAIANVDGEQVLLVKPQ 60
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG+S+ +M +YK+ + ++ V++DD+DL G LR++ G D GHNG+KS+
Sbjct: 61 TYMNDSGKSVGPLMRWYKI-DEKDVYVVYDDMDLPIGKLRIRENGSDGGHNGIKSLFANG 119
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
+++ R R+GIGRP +I HVL F R A ++ K +N
Sbjct: 120 CRDFVRFRLGIGRPLGHMDVIHHVLTPFPEEYRQTFADGAAYAAEAVEGCLKLGVSKGMN 179
Query: 183 HIV 185
Sbjct: 180 RYN 182
>gi|150024340|ref|YP_001295166.1| peptidyl-tRNA hydrolase [Flavobacterium psychrophilum JIP02/86]
gi|149770881|emb|CAL42346.1| Aminoacyl-tRNA hydrolase [Flavobacterium psychrophilum JIP02/86]
Length = 209
Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 92/185 (49%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G EY RHNIGF +D + K ++E +L G +L+KP
Sbjct: 25 FLIVGLGNIGAEYVNTRHNIGFKVVDFLARQESLDFQTVKL-GSLAECKLKGRTLLLLKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M K+ EN LVI DDL+L FGT+R+K G D GHNGLKS+ +
Sbjct: 84 NTYMNLSGKAVQYWMEKEKIEK-ENVLVITDDLNLSFGTIRIKPKGSDGGHNGLKSVQQI 142
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y R R GI + +VLG + E+ L + ++ A +
Sbjct: 143 LNSSEYPRFRFGISDEFKKGKQVDYVLGEWDESEKEKLPERLKIAVEAVKTFALAGLENA 202
Query: 181 LNHIV 185
+
Sbjct: 203 MTAYN 207
>gi|119390981|sp|Q4K688|PTH_PSEF5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 194
Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN G + ++RI +K+ G L+
Sbjct: 5 KLIVGLGNPGTEYEQTRHNAGALFVERIAEKQGINLVADRKYFGLTGRFSHQGQDIRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ + F+++ E LV HD+LDL G +LKTGGG GHNGL+ I
Sbjct: 65 PTTYMNRSGQAVAALAGFFRIKP-EEILVAHDELDLPPGVAKLKTGGGHGGHNGLRDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G + RLR+GIG P + + VLG E+ L ID LP + E
Sbjct: 124 QLGNQNTFHRLRLGIGHPGVASMVSNFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWN 183
Query: 179 SFLNHIVSVR 188
+ ++ S +
Sbjct: 184 RAMKNLHSQK 193
>gi|255321865|ref|ZP_05363015.1| peptidyl-tRNA hydrolase [Campylobacter showae RM3277]
gi|255300969|gb|EET80236.1| peptidyl-tRNA hydrolase [Campylobacter showae RM3277]
Length = 186
Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 84/191 (43%), Positives = 117/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY + RHN+GFM IDR+ + +F KF E+ + Q +L+K
Sbjct: 1 MILIVGLGNPGPEYSKTRHNVGFMLIDRLKNSNFTDVSSTKFQGELFKIQ----NLLLLK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ V++FYK E +VIHDDLDL+FG ++ K GGG+ GHNGLKSI
Sbjct: 57 PTTFMNLSGRSVKAVVDFYK---PERVIVIHDDLDLNFGVVKFKKGGGNGGHNGLKSIDA 113
Query: 121 KCGKNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G +Y+R+RIGIGR + HVLG F++ E+ L I+D +L L K +
Sbjct: 114 LMGADYERVRIGIGRSAHKGESAVTGHVLGEFNAEEKEGLEKILDYCENALNELIKTDID 173
Query: 179 SFLNHIVSVRK 189
++ S +K
Sbjct: 174 -AVSQKFSTKK 183
>gi|39995769|ref|NP_951720.1| peptidyl-tRNA hydrolase [Geobacter sulfurreducens PCA]
gi|68052978|sp|Q74FE6|PTH_GEOSL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|39982533|gb|AAR33993.1| peptidyl-tRNA hydrolase [Geobacter sulfurreducens PCA]
gi|307634728|gb|ADI83502.2| peptidyl-tRNA hydrolase [Geobacter sulfurreducens KN400]
Length = 193
Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 74/186 (39%), Positives = 107/186 (57%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN GFM +DR+ +K F EG G R +L+KP
Sbjct: 4 KLIVGLGNPGPKYLWTRHNAGFMVLDRLAHAIGASVTRKSFSGVFGEGAWHGERLLLLKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S+ E + F+KLP + VIHDDLD+ FG +++K GGG GHNGL+S+ ++
Sbjct: 64 QTYMNLSGRSVAEALRFHKLPLCDTI-VIHDDLDIPFGRVKVKEGGGHGGHNGLRSLVQE 122
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + R+R+GIGRP ++ +VL NFS E L ++D L L
Sbjct: 123 LGGAGFVRVRVGIGRPVH-GDVVNYVLTNFSQDEMADLAHLLDGTLDLLESLLTAGLPKT 181
Query: 181 LNHIVS 186
++ +
Sbjct: 182 MSLYNN 187
>gi|262182792|ref|ZP_06042213.1| peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
Length = 179
Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 66/175 (37%), Positives = 104/175 (59%), Gaps = 7/175 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
F+V GLGNPG +Y RHNIGF D + F KK + +++E + + I+ K
Sbjct: 6 FLVVGLGNPGPKYTGTRHNIGFDVADELAHELFASFSVHKKTNTDVAEARRGDAKVIVAK 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG + + ++ +P+ ++ +V+HD+L+LDF T++ + GGGD GHNGL+S ++
Sbjct: 66 PRSFMNLSGGPIKALAQYFNVPH-DHIIVVHDELELDFATIKRRLGGGDHGHNGLRSTTK 124
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL----PIIDNIARSLP 170
G K+Y+RL +GIGRPP VL ++ E + +D I R+L
Sbjct: 125 SLGTKDYQRLSVGIGRPPGRMDPAAFVLKPWNKQEAQEIPIICADAVDEILRALD 179
>gi|157803534|ref|YP_001492083.1| peptidyl-tRNA hydrolase [Rickettsia canadensis str. McKiel]
gi|166229445|sp|A8EY65|PTH_RICCK RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157784797|gb|ABV73298.1| peptidyl-tRNA hydrolase [Rickettsia canadensis str. McKiel]
Length = 185
Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 82/185 (44%), Positives = 115/185 (62%), Gaps = 2/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M V GLGNPG EY RHNIGF+ I++I + + + KKKF+ EI E ++ + I I
Sbjct: 1 MIFVIGLGNPGKEYQYTRHNIGFIVIEKIANQYNLSFSTKKKFNCEIVESSVEKQKLIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + + E VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNICS-EKIFVIHDDIDLETGRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+RIG+GRP + + +VL NF E ++ ID I + L+ + +
Sbjct: 120 RVIGNNYNRIRIGVGRPQNNQDVADYVLNNFPRSEYEIVIQSIDKITNNFDLILENKLEE 179
Query: 180 FLNHI 184
F N I
Sbjct: 180 FKNKI 184
>gi|118474844|ref|YP_891539.1| peptidyl-tRNA hydrolase [Campylobacter fetus subsp. fetus 82-40]
gi|261885631|ref|ZP_06009670.1| peptidyl-tRNA hydrolase [Campylobacter fetus subsp. venerealis str.
Azul-94]
gi|166199319|sp|A0RMV6|PTH_CAMFF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118414070|gb|ABK82490.1| peptidyl-tRNA hydrolase [Campylobacter fetus subsp. fetus 82-40]
Length = 181
Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 79/189 (41%), Positives = 107/189 (56%), Gaps = 10/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCID-RIHSFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M +VAGLGN G EY RHN+GFM ID + F KF E+ +L+
Sbjct: 1 MTLVAGLGNIGKEYENTRHNVGFMLIDTMLKDGGFNSVSSGKFQGEL----FKKGSLLLL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG SL V +FYK +N +VIHDDLDL FGT+R K GG GHNG+KSI
Sbjct: 57 KPSTFMNLSGNSLKAVNDFYK---PDNIIVIHDDLDLPFGTVRFKRGGSSGGHNGIKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y R+RIGIGR +I +VLG F E+ L ++ + ++ L D++
Sbjct: 114 NLIGNDYDRVRIGIGR--GNNSVISYVLGEFIDDEKDRLKDVLAHCKNAVLELISCGDIT 171
Query: 180 FLNHIVSVR 188
++ +++
Sbjct: 172 QISSKFTLK 180
>gi|227832719|ref|YP_002834426.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
gi|227453735|gb|ACP32488.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
Length = 182
Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 66/175 (37%), Positives = 104/175 (59%), Gaps = 7/175 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
F+V GLGNPG +Y RHNIGF D + F KK + +++E + + I+ K
Sbjct: 9 FLVVGLGNPGPKYTGTRHNIGFDVADELAHELFASFSVHKKTNTDVAEARRGDAKVIVAK 68
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG + + ++ +P+ ++ +V+HD+L+LDF T++ + GGGD GHNGL+S ++
Sbjct: 69 PRSFMNLSGGPIKALAQYFNVPH-DHIIVVHDELELDFATIKRRLGGGDHGHNGLRSTTK 127
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL----PIIDNIARSLP 170
G K+Y+RL +GIGRPP VL ++ E + +D I R+L
Sbjct: 128 SLGTKDYQRLSVGIGRPPGRMDPAAFVLKPWNKQEAQEIPIICADAVDEILRALD 182
>gi|254495025|ref|ZP_01053475.2| Peptidyl-tRNA hydrolase [Polaribacter sp. MED152]
gi|213690607|gb|EAQ42903.2| Peptidyl-tRNA hydrolase [Polaribacter sp. MED152]
Length = 188
Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGN G +Y RHNIGF +D + H +K +I+ + G IL+KP
Sbjct: 4 KLIVGLGNIGDKYTNTRHNIGFKILDEVAEEHNVSFETEKL-GDIASYRFKGRTFILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ M+ K+ ++EN LV+ DDL++DFGT+RLK G D GHNGLK I EK
Sbjct: 63 STFMNLSGKAVKYWMDKEKI-SIENILVVTDDLNIDFGTIRLKAKGSDGGHNGLKDIQEK 121
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
N Y R R G+G + +VLG ++ E L+ + A+ + +
Sbjct: 122 LCTNKYPRFRFGVGANYSKGRQVDYVLGEWNKEETSLLIERLPLSAKVITSFGTDGLANT 181
Query: 181 LNHIVS 186
+N+ +
Sbjct: 182 MNNYNN 187
>gi|225873664|ref|YP_002755123.1| aminoacyl-tRNA hydrolase [Acidobacterium capsulatum ATCC 51196]
gi|254783844|sp|C1F905|PTH_ACIC5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|225793129|gb|ACO33219.1| aminoacyl-tRNA hydrolase [Acidobacterium capsulatum ATCC 51196]
Length = 198
Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF+V GLGNPG EY HN GF+ +D I + H ++ A + QL G IL K
Sbjct: 1 MFLVVGLGNPGIEYQFTPHNAGFLAVDAIAAEHNAVVSNRRCQALTGKIQLGGREVILAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MNLSG ++ ++ + + LV++D+LDL G++R++ G A HNG +SI
Sbjct: 61 PETYMNLSGVAVSALVRELNADPVRDLLVLYDELDLPIGSIRVRERGSPASHNGARSICS 120
Query: 121 KCGK-NYKRLRIGIGRPPDTAHI----IRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G ++ R+RIG+G P + ++L + L ++ AR++ + R
Sbjct: 121 ALGTADWPRVRIGVG-PSGEDDLFRKGKNYLLTPMRKADLATLDGALERTARAVETVVTR 179
Query: 176 EDVSFLNHIV 185
+N
Sbjct: 180 GIGVAMNEFN 189
>gi|94987180|ref|YP_595113.1| peptidyl-tRNA hydrolase [Lawsonia intracellularis PHE/MN1-00]
gi|119390955|sp|Q1MQD5|PTH_LAWIP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|94731429|emb|CAJ54792.1| Peptidyl-tRNA hydrolase [Lawsonia intracellularis PHE/MN1-00]
Length = 201
Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 78/188 (41%), Positives = 112/188 (59%), Gaps = 4/188 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIKP 61
I+AGLGNPG +Y + RHNIGFM I+++ + KKF+ E+ + +L KP
Sbjct: 6 IIAGLGNPGGQYEKTRHNIGFMVINKLITITSASKLSGKKFYCELWKTTTIIDNYLLAKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+++ ++ +Y + +N LVIHD+LDL G ++L+ GGG AGHNGLKSI
Sbjct: 66 QTYMNLSGEAIHPLVEWYNITK-DNLLVIHDELDLPIGKMKLQQGGGTAGHNGLKSIIHN 124
Query: 122 CG-KNYKRLRIGIGR-PPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLRIGIGR P + + + VLG+ S E L + I +L K E +
Sbjct: 125 LGTKDFYRLRIGIGRSPLPSENTVNWVLGHLSMKELTTLNNLFPTIFDALSFFIKDEKET 184
Query: 180 FLNHIVSV 187
+ I S
Sbjct: 185 AIRMINSF 192
>gi|313156824|gb|EFR56264.1| aminoacyl-tRNA hydrolase [Alistipes sp. HGB5]
Length = 187
Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 63/182 (34%), Positives = 98/182 (53%), Gaps = 3/182 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF +D + + + ++++ + G IL+KP
Sbjct: 3 YLIVGLGNIGAEYAGTRHNIGFNVLDALAEASNA-VFTTARYGDVAQVKHKGRTLILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M K+ EN LV+ DD+ L FGTLRL+ G GHNGLK+I+E
Sbjct: 62 STYMNLSGKAVRYWMEAEKIAP-ENLLVVSDDIALPFGTLRLRPKGSAGGHNGLKNIAEL 120
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G N+ R+R G+G H + +VLG +S +R + + ++ A
Sbjct: 121 LGTENFARMRFGVGGDFPKGHQVDYVLGEWSEEDRKAMPERLKVFCDAILSFATIGVERT 180
Query: 181 LN 182
+N
Sbjct: 181 MN 182
>gi|303246472|ref|ZP_07332751.1| peptidyl-tRNA hydrolase [Desulfovibrio fructosovorans JJ]
gi|302492182|gb|EFL52057.1| peptidyl-tRNA hydrolase [Desulfovibrio fructosovorans JJ]
Length = 207
Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 16/195 (8%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTIL---- 58
++ GLGNPG Y RHN GF+ +D + + K A S +D + L
Sbjct: 6 LIVGLGNPGPRYAATRHNFGFLAVDALIARARELGGAPK-SAMTSRKDMDAVAIALPVLP 64
Query: 59 ---------IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGD 109
+KP T+MNLSG+++ M+FYKL + LVIHD+LDL G +R K GGG+
Sbjct: 65 GGAFAQFVCVKPLTYMNLSGRAVRAAMDFYKLAPT-DVLVIHDELDLPLGRMRAKRGGGN 123
Query: 110 AGHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
AGHNGLKS++++ G ++ RLR+GIGRP + +VL F E + ++ +
Sbjct: 124 AGHNGLKSLTQELGSPDFVRLRLGIGRPEPGRDVAGYVLEPFRGEEMAVVRQVLPAAVDA 183
Query: 169 LPLLAKREDVSFLNH 183
+ + + ++
Sbjct: 184 VFTYFEDGLETAMSR 198
>gi|294790716|ref|ZP_06755874.1| aminoacyl-tRNA hydrolase [Scardovia inopinata F0304]
gi|294458613|gb|EFG26966.1| aminoacyl-tRNA hydrolase [Scardovia inopinata F0304]
Length = 200
Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG--QLDGLR--TI 57
+++ GLGNPG +Y RHNIGFMC D + + K A++ +G L G R
Sbjct: 6 WLIVGLGNPGKKYEGTRHNIGFMCADLLAQRWSVSLSEHKGLAQLGKGIMDLGGRRQKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP TFMN SG ++ V ++Y + E+ +VIHDD+DLDFG +++K GG GHNGLKS
Sbjct: 66 LAKPLTFMNDSGDAVASVSSYYDIIP-EHIIVIHDDMDLDFGRIKVKNGGSPGGHNGLKS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDTAHIIR----HVLGNFSSPERYFLLPIIDNIARSLPLL 172
I G Y R+R+G G H VLG F+S ++ + + + A + ++
Sbjct: 125 IDRSLGTGGYNRVRLGTGHSQRGQHAHDNAIKWVLGGFASAQKSQMDDFLSDGADAAEMI 184
Query: 173 AKREDVSFLNHIVSVR 188
+ S +
Sbjct: 185 VFQGIQKAQTQFNSRK 200
>gi|148243439|ref|YP_001228596.1| peptidyl-tRNA hydrolase [Synechococcus sp. RCC307]
gi|147851749|emb|CAK29243.1| Peptidyl-tRNA hydrolase [Synechococcus sp. RCC307]
Length = 201
Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG +Y RHN+GFM +DR+ + K H ++++ R L+
Sbjct: 4 MMLLVGLGNPGSKYDGTRHNVGFMALDRLAAAGSGSFRANTKLHGDLADIGQGDRRLRLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MN SG+++ ++++ E LVI DD+DL G LRL+ GG GHNGL+S
Sbjct: 64 KPQTYMNDSGRAIRASLDWFGWTP-EQLLVIVDDMDLPLGRLRLRLNGGAGGHNGLRSTI 122
Query: 120 EKC-GKNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
G+ + RLRIGIG P + HVLGNF ER L ++ + + L+
Sbjct: 123 AHLGGEAFARLRIGIGAPGTSSEERKEGTVGHVLGNFHPAERPLLDEVLQEVEHGIGLIQ 182
Query: 174 KREDVSFLNHIVSVR 188
++ N I S R
Sbjct: 183 RQGFERAGNRINSFR 197
>gi|169628235|ref|YP_001701884.1| peptidyl-tRNA hydrolase (PTH) [Mycobacterium abscessus ATCC 19977]
gi|254783879|sp|B1MKD8|PTH_MYCA9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|169240202|emb|CAM61230.1| Probable peptidyl-tRNA hydrolase (PTH) [Mycobacterium abscessus]
Length = 196
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 3/186 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG Y + RHN+GFM D + + KK AE + +L G L KP
Sbjct: 10 LVVGLGNPGPNYAKTRHNLGFMVADLLAAKDGATFKPHKKSGAEATTIRLGGRAVNLAKP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+TFMN SG + + F+ +P N +V+HD+LDLDFGT+RLK GGG+ GHNGL+S+S+
Sbjct: 70 RTFMNTSGPQVAALAKFFSVPPA-NVIVMHDELDLDFGTVRLKLGGGEGGHNGLRSVSQS 128
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G K+Y R+R+G+GRPP VL NF+ E + + + A + LL + +
Sbjct: 129 LGTKDYLRVRLGVGRPPGRKDPAAFVLENFAKAETDQVPLLCEQGADAAELLIRLGLEAA 188
Query: 181 LNHIVS 186
N + +
Sbjct: 189 QNQVHA 194
>gi|308274566|emb|CBX31165.1| Peptidyl-tRNA hydrolase [uncultured Desulfobacterium sp.]
Length = 201
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 66/181 (36%), Positives = 94/181 (51%), Gaps = 2/181 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++AGLGNPG Y + RHN GFM ID + P K K+ G + G+ IL KP
Sbjct: 10 LIAGLGNPGSAYAKTRHNAGFMVIDELADAFSIPVEKNKYETIYGRGLIKGIDVILAKPV 69
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
FMN SG + + N+YK+ ++ L+IHDD+DL FG +++ GG GH G+KS+ +
Sbjct: 70 AFMNRSGPPIYSLSNYYKILQ-KDILIIHDDVDLAFGRIKINPKGGSGGHKGIKSLIDTF 128
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G N R+RIGIGR + +VLG F+ E L I + + +
Sbjct: 129 GNNNISRIRIGIGRSESGISVADYVLGKFNIKENNELNLINKAARDAAVTIIYSGITEAM 188
Query: 182 N 182
N
Sbjct: 189 N 189
>gi|297568583|ref|YP_003689927.1| peptidyl-tRNA hydrolase [Desulfurivibrio alkaliphilus AHT2]
gi|296924498|gb|ADH85308.1| peptidyl-tRNA hydrolase [Desulfurivibrio alkaliphilus AHT2]
Length = 197
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 66/188 (35%), Positives = 103/188 (54%), Gaps = 3/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG EY RHN+GF+ D + H +KK+ AE+ G L G +L+
Sbjct: 1 MRLLVGLGNPGGEYELTRHNVGFIFTDYLADRHGISLKNEKKWDAEVGRGTLWGQPVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG ++ ++ F++L +V D+LDL G RL G G GHNG+KS+
Sbjct: 61 KPLTYMNRSGLAVGKIARFFQLEPTS-VVVFQDELDLPLGACRLVQGRGAGGHNGIKSLM 119
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ +++ R RIG+GRPP VL FS E + ++ + + +L KR+
Sbjct: 120 DHLASRDFVRFRIGVGRPPAARAAAGFVLARFSPAELQVVDKLLPFLEEGVEMLLKRDLQ 179
Query: 179 SFLNHIVS 186
+ +N + +
Sbjct: 180 AAMNLVNA 187
>gi|148238651|ref|YP_001224038.1| peptidyl-tRNA hydrolase [Synechococcus sp. WH 7803]
gi|147847190|emb|CAK22741.1| Peptidyl-tRNA hydrolase [Synechococcus sp. WH 7803]
Length = 209
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 67/193 (34%), Positives = 103/193 (53%), Gaps = 8/193 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG Y RHN+GFM ++++ + H K ++++ R L+ P
Sbjct: 9 LVVGLGNPGDRYASTRHNVGFMALEQLAARDHARFRAMAKLQGDLADVGAGSDRLRLLMP 68
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S+ ++++ L NL +V+ DD+DL G LRL+ G GHNGLKS +
Sbjct: 69 NTYMNESGRSIRATLDWFGL-NLGQVIVLVDDMDLPLGRLRLRARGSAGGHNGLKSTIQH 127
Query: 122 CG-KNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G + + RLRIGIG P A + HVLG FS E L +++ + L + ++
Sbjct: 128 LGTQEFARLRIGIGAPGRSPEERRARTVSHVLGAFSREEEPLLKEVLNEVLAGLERIQRQ 187
Query: 176 EDVSFLNHIVSVR 188
NHI ++
Sbjct: 188 GLERAGNHINALN 200
>gi|295132328|ref|YP_003583004.1| peptidyl-tRNA hydrolase [Zunongwangia profunda SM-A87]
gi|294980343|gb|ADF50808.1| peptidyl-tRNA hydrolase [Zunongwangia profunda SM-A87]
Length = 209
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 97/185 (52%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++AGLGN G +Y RHNIGF +D + + +K +I++ + G +L+KP
Sbjct: 25 FLIAGLGNIGPKYENTRHNIGFKILDELAAKQEAVFTTQKL-GDIAQFRYKGRTFVLLKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + K+ +EN LV+ DDL+L FGTLRLKT G D GHNGLK I +
Sbjct: 84 STYMNLSGKAVNYWLQKEKIA-VENLLVVTDDLNLPFGTLRLKTKGSDGGHNGLKDIQAQ 142
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y R R GI I +VLG +S E L + A + A +
Sbjct: 143 LNTTKYNRFRFGISAEFSKGQQIDYVLGEWSEEELKELPGRLKISAELIESFATAGVSNT 202
Query: 181 LNHIV 185
+N
Sbjct: 203 MNSFN 207
>gi|330995950|ref|ZP_08319845.1| aminoacyl-tRNA hydrolase [Paraprevotella xylaniphila YIT 11841]
gi|329574289|gb|EGG55864.1| aminoacyl-tRNA hydrolase [Paraprevotella xylaniphila YIT 11841]
Length = 187
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 94/185 (50%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G+EY RHNIGF +D + ++ K + ++ L G + +L+KP
Sbjct: 3 YLIVGLGNIGNEYAGTRHNIGFRVLDALAKASN-LVFEDKRYGAVASLSLKGQQLVLLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ MN +P LE LV+ DDL L FG LR+K G DAGHNGLK+I+
Sbjct: 62 STYMNLSGNAVRYWMNKENVP-LERILVVVDDLALPFGALRMKPSGSDAGHNGLKNIASV 120
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y RLR GIG I VLG F+ + + + +
Sbjct: 121 LGTQAYARLRFGIGNDFPRGGQIGFVLGQFTEEDLETMDERVGLACEMIKSFCLAGIQIT 180
Query: 181 LNHIV 185
+N
Sbjct: 181 MNQFN 185
>gi|227824247|ref|ZP_03989079.1| peptidyl-tRNA hydrolase [Acidaminococcus sp. D21]
gi|226904746|gb|EEH90664.1| peptidyl-tRNA hydrolase [Acidaminococcus sp. D21]
Length = 206
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 101/190 (53%), Gaps = 5/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIK 60
+V LGN G EY RHNIGFM D + W+K A E ++ + +LIK
Sbjct: 11 KLVVALGNIGPEYAMTRHNIGFMTADILARRWGMEGDWRKAERAFYLEKRVP-EKVLLIK 69
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG ++ + FY L E+ LVI DD+DL G+LR++ G GHNGLKSI +
Sbjct: 70 PTTYMNLSGDAVRDFAGFYHL-QPEDVLVIQDDMDLPVGSLRIRKQGTSGGHNGLKSIEK 128
Query: 121 KCGKN-YKRLRIGIGRPPD-TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G Y R+++GIG P ++ HVL F +R + I++ A ++ K +
Sbjct: 129 ALGSEHYPRIKVGIGHPLRVQEAVVSHVLHRFEGTDRETIAQILEKAADAVEDWMKGASI 188
Query: 179 SFLNHIVSVR 188
+ L+ + +
Sbjct: 189 NELSQKYNQK 198
>gi|120555279|ref|YP_959630.1| aminoacyl-tRNA hydrolase [Marinobacter aquaeolei VT8]
gi|166199357|sp|A1U374|PTH_MARAV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|120325128|gb|ABM19443.1| peptidyl-tRNA hydrolase [Marinobacter aquaeolei VT8]
Length = 196
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 69/188 (36%), Positives = 102/188 (54%), Gaps = 3/188 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHN G + ++ + +KK+H + Q GL L+ P
Sbjct: 7 MVVGLGNPGSDYENTRHNAGALFVEALAREAGQTLRPEKKYHGLYARIQWQGLDLHLLNP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ + +F+K+ + E LV HD+LDL GT +LK GGG GHNGL+
Sbjct: 67 STFMNRSGTAIKALADFFKI-SPEQILVAHDELDLPPGTAKLKKGGGHGGHNGLRDTIAH 125
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++RLR+GIG P D+ + VLG E L + D + R LP A + +
Sbjct: 126 LGTNDFQRLRLGIGHPGDSRKVTGFVLGRLGKQETEQLTAVFDEVMRVLPDAASGKLAAA 185
Query: 181 LNHIVSVR 188
+N + S +
Sbjct: 186 MNRLHSFK 193
>gi|238650661|ref|YP_002916513.1| peptidyl-tRNA hydrolase [Rickettsia peacockii str. Rustic]
gi|259535240|sp|C4K1L4|PTH_RICPU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238624759|gb|ACR47465.1| peptidyl-tRNA hydrolase [Rickettsia peacockii str. Rustic]
Length = 182
Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats.
Identities = 81/183 (44%), Positives = 116/183 (63%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHN+GF+ I++I + + + KKKF+ EI+E D + I I
Sbjct: 1 MLLVIGLGNPGKEYQYTRHNVGFIAIEKIANQYNSSFSTKKKFNCEIAETISDRQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + + VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNIYPAK-IFVIHDDIDLETGRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+RIG+GRP + + +VL +FS PE ++ ID I + L+ + +
Sbjct: 120 GVIGNNYNRIRIGVGRPQNNQDVADYVLNHFSKPEYKTVMQAIDRITSNFGLILENKLEE 179
Query: 180 FLN 182
F N
Sbjct: 180 FKN 182
>gi|157828785|ref|YP_001495027.1| peptidyl-tRNA hydrolase [Rickettsia rickettsii str. 'Sheila Smith']
gi|165933513|ref|YP_001650302.1| peptidyl-tRNA hydrolase [Rickettsia rickettsii str. Iowa]
gi|166229446|sp|A8GSZ4|PTH_RICRS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038161|sp|B0BUI6|PTH_RICRO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157801266|gb|ABV76519.1| peptidyl-tRNA hydrolase [Rickettsia rickettsii str. 'Sheila Smith']
gi|165908600|gb|ABY72896.1| peptidyl-tRNA hydrolase [Rickettsia rickettsii str. Iowa]
Length = 185
Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats.
Identities = 81/186 (43%), Positives = 118/186 (63%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHN+GF+ I++I + + + KKKF+ EI+E G + I I
Sbjct: 1 MLLVIGLGNPGKEYQYTRHNVGFIAIEKIANQYNSSFSTKKKFNCEIAETISYGQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + ++ VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNIYPAKS-FVIHDDIDLETGRVKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+RIG+GRP + + +VL +FS PE ++ ID I + L+ + +
Sbjct: 120 GVIGNNYNRIRIGVGRPQNNQDLADYVLNHFSKPEYKTVMQAIDRITSNFGLILENKLEE 179
Query: 180 FLNHIV 185
F N +
Sbjct: 180 FKNKMA 185
>gi|77460976|ref|YP_350483.1| peptidyl-tRNA hydrolase [Pseudomonas fluorescens Pf0-1]
gi|119390983|sp|Q3K6W2|PTH_PSEPF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|77384979|gb|ABA76492.1| peptidyl-tRNA hydrolase [Pseudomonas fluorescens Pf0-1]
Length = 194
Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN G + ++RI +K+ G L+
Sbjct: 5 KLIVGLGNPGAEYEQTRHNAGALFVERIAHAQNVNLVADRKYFGLTGRFSHQGQDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ + F+++ E LV HD+LDL G +LK GGG GHNGL+ I
Sbjct: 65 PTTYMNRSGQAVAALAGFFRIKP-EEILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G + RLR+GIG P + + VLG E+ L ID LP + E
Sbjct: 124 QLGNQNTFHRLRLGIGHPGVASMVSNFVLGRAPRAEQEKLDASIDFALGVLPDILAGEWN 183
Query: 179 SFLNHIVSVR 188
+ ++ S +
Sbjct: 184 RAMKNLHSQK 193
>gi|255020868|ref|ZP_05292924.1| Peptidyl-tRNA hydrolase [Acidithiobacillus caldus ATCC 51756]
gi|254969659|gb|EET27165.1| Peptidyl-tRNA hydrolase [Acidithiobacillus caldus ATCC 51756]
Length = 193
Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats.
Identities = 73/189 (38%), Positives = 106/189 (56%), Gaps = 3/189 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
+++AGLGNPG EY RHN+GF C+ + + P ++ +F AE+++G L G R +L +
Sbjct: 5 WLLAGLGNPGEEYAHTRHNVGFWCVRDLAATVGAPWGREARFKAELAQGLLAGQRLVLCQ 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ +MN SG + V FYK+P E +V+HDDLDL G RLK GGG+ GHNGL+ +
Sbjct: 65 PQDYMNRSGGPVQSVAAFYKIPP-ERIVVVHDDLDLLPGVARLKFGGGNGGHNGLRDLDR 123
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N Y RLR+GIG P ++ +VLG +R + I LP + +
Sbjct: 124 ALGTNAYWRLRLGIGHPGHKDRVVAYVLGKPKPEDRGQIDAAIHRALSVLPDFLQGRVDA 183
Query: 180 FLNHIVSVR 188
+ S+
Sbjct: 184 AQQRLHSLE 192
>gi|323388151|gb|ADX60347.1| peptidyl-tRNA hydrolase [Pseudomonas fluorescens]
Length = 194
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN G + ++RI +K+ G L+
Sbjct: 5 KLIVGLGNPGAEYEQTRHNAGALFVERIAHAQGVNLVADRKYFGLTGRFSHQGQDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ + F+++ E LV HD+LDL G +LK GGG GHNGL+ I
Sbjct: 65 PTTYMNRSGQAVAALAGFFRIKP-EEILVAHDELDLPPGVAKLKQGGGHGGHNGLRDIIA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G + RLR+GIG P + + VLG E+ L ID LP + E
Sbjct: 124 QLGNQNTFYRLRLGIGHPGVASMVSNFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWN 183
Query: 179 SFLNHIVSVR 188
+ ++ S +
Sbjct: 184 RAMKNLHSQK 193
>gi|227504130|ref|ZP_03934179.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
gi|227199262|gb|EEI79310.1| peptidyl-tRNA hydrolase [Corynebacterium striatum ATCC 6940]
Length = 198
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 102/189 (53%), Gaps = 5/189 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE-GQLDGLRTILIK 60
++V GLGNPG +Y RHN+G+M +D + + H+ + + ++++
Sbjct: 13 WLVVGLGNPGAKYAATRHNVGYMAVDDLLAESGELLQPVAGHSLTAAPLNVADTPVLVVR 72
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG + + +P E LVIHD+LDL +R+K GG + GHNGLKS++E
Sbjct: 73 SATFMNLSGDPIAPLAQQLGIP-AERVLVIHDELDLPPNKIRIKVGGNENGHNGLKSLTE 131
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G ++Y R+RIGIGRPP + I +VLG + I+ A ++ L+ S
Sbjct: 132 RLGTRDYPRVRIGIGRPPKGSSIPDYVLGPIDAD--AGFDAAIETAADAVRLIVSSGIQS 189
Query: 180 FLNHIVSVR 188
N I S +
Sbjct: 190 AQNEIHSRK 198
>gi|301631687|ref|XP_002944929.1| PREDICTED: peptidyl-tRNA hydrolase-like [Xenopus (Silurana)
tropicalis]
Length = 199
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 65/188 (34%), Positives = 96/188 (51%), Gaps = 3/188 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG EY RHN GF ID + ++ + ++ + G L++P
Sbjct: 4 LFVGLGNPGPEYEATRHNAGFCWIDALARELGANLVPERGYWGLVARTSVQGESRWLLQP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ + F+K+ E LV HD+LD G ++LK GGG GHNGL+ I +
Sbjct: 64 QTFMNLSGKSVAALARFFKIAP-EEILVAHDELDFAPGQIKLKCGGGHGGHNGLRDIHAQ 122
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLRIGIG P A ++ VL +R + I + ++ L +
Sbjct: 123 LGSADYWRLRIGIGHPGVKAEVLHWVLKKPPPDQRTLIEGSIAHALQAKDALLAGDMEKA 182
Query: 181 LNHIVSVR 188
I + +
Sbjct: 183 TLQIHTTK 190
>gi|145590101|ref|YP_001156698.1| aminoacyl-tRNA hydrolase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|229485509|sp|A4T070|PTH_POLSQ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|145048507|gb|ABP35134.1| peptidyl-tRNA hydrolase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 196
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 104/193 (53%), Gaps = 9/193 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ E+RHN GF +D + +K+FH ++++ + +G L+K
Sbjct: 3 KLIVGLGNPGEEHTEDRHNAGFWFLDVLAKQLNSRFESEKRFHGKVAKAKWEGEDLFLLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSGQS+ + F+K+ E LV+ D+LDL GT RLK GGG GHNGLK I
Sbjct: 63 PSTYMNLSGQSVGALCRFHKITPAE-ILVVQDELDLKPGTARLKLGGGTGGHNGLKDIQA 121
Query: 121 KCGK-NYKRLRIGIGRP------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
Y RLR+GIG P + +VL E+ + I+N + LPL
Sbjct: 122 HLSTPEYWRLRLGIGHPRDLAGDGRPMDVADYVLRRPQLAEQKMIDASIENGLQILPLFL 181
Query: 174 KREDVSFLNHIVS 186
K + + + + S
Sbjct: 182 KGDTQTAMMELHS 194
>gi|260060921|ref|YP_003194001.1| peptidyl-tRNA hydrolase [Robiginitalea biformata HTCC2501]
gi|88785053|gb|EAR16222.1| peptidyl-tRNA hydrolase [Robiginitalea biformata HTCC2501]
Length = 188
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++AGLGN G EY E RHNIGF +D + F + E+ ++ G + +KP
Sbjct: 4 FLIAGLGNIGDEYAETRHNIGFRILDHLSRSEDFSFESARL-GEVGTWKVKGRSLLCLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+++ ++ K+P L+N LV+ DDL+L FGTLRLKT G D GHNGLK I +
Sbjct: 63 ATYMNRSGRAVQYWLDKEKIP-LQNLLVVTDDLNLPFGTLRLKTKGSDGGHNGLKDIQQI 121
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y R R GIG + +VLG + E+ L +D A + A
Sbjct: 122 LGTTGYARFRFGIGSEFSKGRQVDYVLGKWEEAEQEALPERLDRSAELIRSFALAGPGIT 181
Query: 181 LNHIVS 186
+N +
Sbjct: 182 MNQFNN 187
>gi|77359995|ref|YP_339570.1| peptidyl-tRNA hydrolase [Pseudoalteromonas haloplanktis TAC125]
gi|119390982|sp|Q3IK86|PTH_PSEHT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|76874906|emb|CAI86127.1| peptidyl-tRNA hydrolase [Pseudoalteromonas haloplanktis TAC125]
Length = 194
Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G I+++ + + K+H + + L+ P
Sbjct: 6 MLVGLANPGPEYANTRHNAGAWFIEQLAARYNCTLKHDPKYHGLTGKVIIQDQEFKLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + NF+K+P +E+ LV HD+LDL+ G +LK GGG GHNGLK I K
Sbjct: 66 TTYMNLSGKAVGSLANFFKIP-VESILVAHDELDLEPGVAKLKKGGGHGGHNGLKDIIAK 124
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K++ RLRIG+G P + VLG + ++ + ID R + +LAK +
Sbjct: 125 MANQKDFMRLRIGVGHPGHREMVTGWVLGKAAKADQEKMDAAIDEAVRCMEILAKDGVLK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 AQNRLHSFK 193
>gi|227537440|ref|ZP_03967489.1| aminoacyl-tRNA hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242714|gb|EEI92729.1| aminoacyl-tRNA hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 194
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 71/185 (38%), Positives = 97/185 (52%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY + RHNIGFM D + + K HA SE + G +IKP
Sbjct: 11 YLIVGLGNIGREYEDTRHNIGFMVADELVAQAGGSFSTLK-HAYYSEYKQRGHNVYVIKP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M K+P + N LVI DDL L FGT+RLK G AGHNGLKSI
Sbjct: 70 TTYMNLSGKAVNFWMQQLKVP-IANLLVIVDDLALPFGTIRLKPKGSSAGHNGLKSIEAL 128
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
C G+ Y RLR GI +VL F + E+ L +I+ + +
Sbjct: 129 CGGQAYPRLRFGISDNFPKGRQADYVLAPFDNDEQKELPALIERSVQMVNSFINIGIELT 188
Query: 181 LNHIV 185
+ ++
Sbjct: 189 MTNMN 193
>gi|325954548|ref|YP_004238208.1| peptidyl-tRNA hydrolase [Weeksella virosa DSM 16922]
gi|323437166|gb|ADX67630.1| Peptidyl-tRNA hydrolase [Weeksella virosa DSM 16922]
Length = 188
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 65/182 (35%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G +Y RHNIGF ++ I + F EI++ + G L+KP
Sbjct: 4 FLIVGLGNIGDKYENTRHNIGFKVVEEIAKRNDTKFSSSNF-GEIAQFKYKGRPVTLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M + LV+ DDL+LDFGTLR++ G D GHNGLK I K
Sbjct: 63 NTYMNLSGDAVRFWMQKENIDLP-QLLVVTDDLNLDFGTLRMRGKGSDGGHNGLKDIQNK 121
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
NY RLR G+G + +VLG+++ E L +D A + +
Sbjct: 122 LQNTNYPRLRFGVGNDFLKGQQVDYVLGDWTIEENKILQDRLDMAAEAALAFVFHGLANA 181
Query: 181 LN 182
+N
Sbjct: 182 MN 183
>gi|154707189|ref|YP_001423505.1| peptidyl-tRNA hydrolase [Coxiella burnetii Dugway 5J108-111]
gi|212211869|ref|YP_002302805.1| peptidyl-tRNA hydrolase [Coxiella burnetii CbuG_Q212]
gi|189038286|sp|A9KF13|PTH_COXBN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226694251|sp|B6J330|PTH_COXB2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|154356475|gb|ABS77937.1| peptidyl-tRNA hydrolase [Coxiella burnetii Dugway 5J108-111]
gi|212010279|gb|ACJ17660.1| peptidyl-tRNA hydrolase [Coxiella burnetii CbuG_Q212]
Length = 187
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 99/187 (52%), Gaps = 7/187 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++AGLGNPG +Y RHN+G ++ + K KFH +++ L+K
Sbjct: 6 KLIAGLGNPGDQYARTRHNVGAWFLETLAQQRNQSLAKENKFHGFVAKCN----DYWLLK 61
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E L+ HD+LD G +RLK GGG GHNGL++I +
Sbjct: 62 PTTFMNESGQAVAALARFYKIKPSE-ILIAHDELDFPAGDIRLKEGGGHGGHNGLRNIIQ 120
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ RLRIGI P + +VL S +R +L I+ R +P L + +
Sbjct: 121 HLGSSDFYRLRIGINHPGHKDRVTPYVLSPPSENDRIAILAAIEKGLRLIPELVQGDFQK 180
Query: 180 FLNHIVS 186
+ + S
Sbjct: 181 VMRELHS 187
>gi|150006313|ref|YP_001301057.1| peptidyl-tRNA hydrolase [Bacteroides vulgatus ATCC 8482]
gi|254885160|ref|ZP_05257870.1| peptidyl-tRNA hydrolase [Bacteroides sp. 4_3_47FAA]
gi|294776298|ref|ZP_06741782.1| aminoacyl-tRNA hydrolase [Bacteroides vulgatus PC510]
gi|319641347|ref|ZP_07996042.1| peptidyl-tRNA hydrolase [Bacteroides sp. 3_1_40A]
gi|166199306|sp|A6L6X1|PTH_BACV8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|149934737|gb|ABR41435.1| peptidyl-tRNA hydrolase [Bacteroides vulgatus ATCC 8482]
gi|254837953|gb|EET18262.1| peptidyl-tRNA hydrolase [Bacteroides sp. 4_3_47FAA]
gi|294449885|gb|EFG18401.1| aminoacyl-tRNA hydrolase [Bacteroides vulgatus PC510]
gi|317387028|gb|EFV67912.1| peptidyl-tRNA hydrolase [Bacteroides sp. 3_1_40A]
Length = 187
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 67/185 (36%), Positives = 93/185 (50%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF +D + + + + L G + IL+KP
Sbjct: 3 YLITGLGNIGEEYRNTRHNIGFTVLDALAKASN-LVFTDGRYGATATLSLKGRQLILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STYMNLSGNAVRYWMQKENIP-LENVLIVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y RLR GIG I VLG+F+ + + + +
Sbjct: 121 LGTQDYARLRFGIGNDFPRGGQIDFVLGHFTDEDLKTMDERVATACDIIKSFCLAGISIT 180
Query: 181 LNHIV 185
+N
Sbjct: 181 MNQYN 185
>gi|311693596|gb|ADP96469.1| peptidyl-tRNA hydrolase [marine bacterium HP15]
Length = 195
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 3/188 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHN G + ++ + +KK+H + Q GL L+ P
Sbjct: 7 MVVGLGNPGADYENTRHNAGALFVEALARTAGQTLRPEKKYHGLYARIQWQGLDLHLLNP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG ++ + +F+K+ + L+ HD+LDL GT +LK GGG GHNGL+
Sbjct: 67 TTFMNRSGLAIKALADFFKI-QPQQILIAHDELDLPPGTAKLKKGGGHGGHNGLRDAIAH 125
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++RLRIGIG P D+ + +VLG E L +ID I R LP A + +
Sbjct: 126 LGTNDFQRLRIGIGHPGDSRRVTGYVLGRLGKQETEELNAVIDEIMRVLPDAASGKLPAA 185
Query: 181 LNHIVSVR 188
+N + S +
Sbjct: 186 MNRLHSFK 193
>gi|159036392|ref|YP_001535645.1| aminoacyl-tRNA hydrolase [Salinispora arenicola CNS-205]
gi|157915227|gb|ABV96654.1| Aminoacyl-tRNA hydrolase [Salinispora arenicola CNS-205]
Length = 196
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 73/188 (38%), Positives = 109/188 (57%), Gaps = 5/188 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFH-AEISEGQL--DGLRTIL 58
++V GLGNPG EY NRHN+GF+ D + + K AE++EG+L G R +L
Sbjct: 8 WLVVGLGNPGREYAGNRHNVGFLVADLLAERLGARFGRHKRAVAEVAEGRLGFGGPRLVL 67
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG ++ + FYK+P + +HD+LD+ +G +RLK GGG+ GHNG++S+
Sbjct: 68 VKPLTYMNLSGSAVAGLAQFYKVPPA-RVVAVHDELDIPYGQVRLKCGGGEGGHNGVRSM 126
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
++ G K Y R+R G+GRPP VL +F + ER L ++D A + + R
Sbjct: 127 TKSLGTKEYVRVRFGVGRPPARRDPADFVLSDFGTVERKELDFLVDRAADVVESIVLRGV 186
Query: 178 VSFLNHIV 185
N
Sbjct: 187 EPTQNLYH 194
>gi|256545181|ref|ZP_05472547.1| aminoacyl-tRNA hydrolase [Anaerococcus vaginalis ATCC 51170]
gi|256399222|gb|EEU12833.1| aminoacyl-tRNA hydrolase [Anaerococcus vaginalis ATCC 51170]
Length = 194
Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 57/189 (30%), Positives = 105/189 (55%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+ + GLGNPG +Y RHN GF+ ID + + K KF + I +G + G + +L+K
Sbjct: 1 MYYIVGLGNPGIQYENTRHNAGFITIDYLARKYSIDVRKIKFKSLIGQGVISGQKVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ E+ ++ + + +VI+DD+D+DFG++R++ G HNG+KSI
Sbjct: 61 PQTYMNNSGEAIREIYKYFDF-DHDKLIVIYDDIDIDFGSIRIRKKGSAGTHNGMKSIIY 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
++ R+++ +G+ P + VL FS E + + + ++ ++ +
Sbjct: 120 NLEFDDFPRIKVAVGKKPSYMDLANFVLSGFSKQEVKIIEEEVKFASDAIEMILEEGIEK 179
Query: 180 FLNHIVSVR 188
++ S R
Sbjct: 180 TMSMFNSKR 188
>gi|313665035|ref|YP_004046906.1| aminoacyl-tRNA hydrolase [Mycoplasma leachii PG50]
gi|312949491|gb|ADR24087.1| aminoacyl-tRNA hydrolase [Mycoplasma leachii PG50]
Length = 186
Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 105/187 (56%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY + RHN GF+ ID + + + + K++F++ + ++ + + +K
Sbjct: 1 MKVIIGLGNIGKEYEKTRHNAGFIAIDLLLEKYKYNSVKEEFNSLVYTSIINNQKVLFVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +++NFYK+ +L + +VIHDD DL+ ++ K G AGHNG+KSI
Sbjct: 61 PLTFMNNSGLAVRQIINFYKI-DLNDLIVIHDDKDLNISRIQFKKDGSSAGHNGIKSIIN 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+++ RLR+GI +P + II VL FS E L N + + +
Sbjct: 120 NLNTQDFYRLRVGINKPANQWKIIDWVLSKFSDDELNLLKESFVNKSEFINDFTNNKTFI 179
Query: 180 F-LNHIV 185
+ +N
Sbjct: 180 YLMNKYN 186
>gi|160947368|ref|ZP_02094535.1| hypothetical protein PEPMIC_01302 [Parvimonas micra ATCC 33270]
gi|158446502|gb|EDP23497.1| hypothetical protein PEPMIC_01302 [Parvimonas micra ATCC 33270]
Length = 195
Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 104/187 (55%), Gaps = 2/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG Y RHN+G+ ID + + K+KF + + + G + I +KP
Sbjct: 6 FLIVGLGNPGKNYIGTRHNVGYGVIDILAEKYSINMKKEKFKSFYGQINMFGKKCIFLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++++ +N++K+ EN +V+ DD+D+ FGT+R+K G HNGL+SI
Sbjct: 66 LTYMNLSGEAVIDAVNYFKIKP-ENIIVVVDDIDIPFGTVRIKKKGSAGTHNGLRSIIYH 124
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+N+ R++I +G+ PD + VL F E L ++ A ++ + K +
Sbjct: 125 LETENFPRVKISVGKCPDYMDLKDFVLSKFLPSEEKILKKELEISADAVEEIIKNDVDKT 184
Query: 181 LNHIVSV 187
+ +
Sbjct: 185 MCKFNGM 191
>gi|71894626|ref|YP_278734.1| peptidyl-tRNA hydrolase [Mycoplasma synoviae 53]
gi|119390964|sp|Q4A5E8|PTH_MYCS5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71851414|gb|AAZ44023.1| peptidyl-tRNA hydrolase [Mycoplasma synoviae 53]
Length = 187
Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 100/190 (52%), Gaps = 7/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF+ ID I K+K H ++ I+ K
Sbjct: 1 MKLIVGLGNPGDKYKFTRHNVGFLVIDLICQKLKITLDKEKTHGSYAKF----EDFIIAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG +LE+ NF+K+ ++ LVIHD+ D + G +K GG HNG+ +
Sbjct: 57 PNTYMNLSGNFVLELANFFKIAP-DDILVIHDEKDFELGKSAIKIGGSGGSHNGVLDVIN 115
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K +N+KRL+IGIG+ + + +VL FS E L P+++ A + +
Sbjct: 116 KLNTQNFKRLKIGIGQNQE-MALKDYVLQRFSLEEFSVLEPVLNQAADVCIQYSFNDIHY 174
Query: 180 FLNHIVSVRK 189
+N +K
Sbjct: 175 LMNKYNQKKK 184
>gi|319945391|ref|ZP_08019652.1| aminoacyl-tRNA hydrolase [Lautropia mirabilis ATCC 51599]
gi|319741384|gb|EFV93810.1| aminoacyl-tRNA hydrolase [Lautropia mirabilis ATCC 51599]
Length = 216
Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 7/188 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNP ++ +RHN GF ID + + KF ++ E ++ L+KP
Sbjct: 6 LIVGLGNPTDQHAHDRHNAGFWFIDALLRHYPGQMRPDAKFLGDVGEVRIGTQVVRLLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + FY+L + LV +D+LDL G+ RLK GG HNGL+ I+
Sbjct: 66 MTYMNRSGQSVGALARFYRLEPA-DILVAYDELDLMPGSARLKLGGSS-THNGLRDITAH 123
Query: 122 CGK-NYKRLRIGIGRPPD---TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G Y RLR+GIG P ++ VLG S ++ + D LP+L +
Sbjct: 124 LGTPRYWRLRLGIGHPRSLNLNKSVVDFVLGKPSQSDQQLIDQATDRSVDHLPILMRDGW 183
Query: 178 VSFLNHIV 185
+
Sbjct: 184 EIATQQLH 191
>gi|294155988|ref|YP_003560372.1| aminoacyl-tRNA hydrolase [Mycoplasma crocodyli MP145]
gi|291599939|gb|ADE19435.1| aminoacyl-tRNA hydrolase [Mycoplasma crocodyli MP145]
Length = 190
Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 72/190 (37%), Positives = 101/190 (53%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y RHN GFM ID I K KF+ + I+ K
Sbjct: 1 MRLIVGLGNPGDTYKFTRHNAGFMVIDIILKKLGLELNKNKFNGLFVKID----DLIIAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG + E+ NFYK+ E+ LVI+D+ D D G +K GG HNG+K+ISE
Sbjct: 57 PMTYMNLSGTFVKELANFYKILP-EDILVIYDEKDYDIGNASIKVAGGVGSHNGVKNISE 115
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+K++RIGIGR + HVLGNF++ E L P+++ A + A + +
Sbjct: 116 NLDSVTFKKMRIGIGRGYGATRVKDHVLGNFTAGEMEKLEPVLNLAADAAISYAYNDINT 175
Query: 180 FLNHIVSVRK 189
+N R+
Sbjct: 176 VMNQFNIFRR 185
>gi|148378009|ref|YP_001256885.1| peptidyl-tRNA hydrolase [Mycoplasma agalactiae PG2]
gi|238686694|sp|A5IZI8|PTH_MYCAP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148292055|emb|CAL59447.1| Peptidyl tRNA hydrolase [Mycoplasma agalactiae PG2]
Length = 188
Score = 207 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG+EY RHN GF+ ID+I K+KF+ E + IL K
Sbjct: 1 MKLIVGLGNPGNEYRFTRHNAGFLAIDKICEKLNISLNKEKFNGEFAV----SDGFILAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG + + +FYK+ N + +VI+DDL G +K GG AGH G++ +
Sbjct: 57 PLTYMNKSGDFVYSIASFYKI-NPSDIIVIYDDLSFSIGQAAIKIGGSSAGHKGIERLMS 115
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K ++KR+R+GIG T I +VL F+ E + +++ +A + L +
Sbjct: 116 KFSSNDFKRIRVGIGVNSGT-TIKDYVLSLFTKDEMIVVEEVLEKVADAAISLVYNDVNF 174
Query: 180 FLNHIVSVRK 189
+N + K
Sbjct: 175 VMNKFNTDNK 184
>gi|255327296|ref|ZP_05368370.1| aminoacyl-tRNA hydrolase [Rothia mucilaginosa ATCC 25296]
gi|255295576|gb|EET74919.1| aminoacyl-tRNA hydrolase [Rothia mucilaginosa ATCC 25296]
Length = 195
Score = 207 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 5/188 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQL--DGLRTIL 58
+++ GLGNPG Y + RHNIG M +D + K K A + EG+L G + +L
Sbjct: 5 WLIVGLGNPGPNYAKTRHNIGQMVLDELAKEVGGSFKKHSKASAVVVEGRLGFGGPKAVL 64
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+K +MN SG + + FY + + ++ +V+HD+LD+ F T++LK GGG+ GHNGL+ I
Sbjct: 65 MKSLGYMNTSGGPVSAIAKFYGI-DPDHIIVVHDELDIPFDTIKLKIGGGEGGHNGLRDI 123
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
++ G K+Y R+R GIGRPP VL FSS E L +I N A + +L K
Sbjct: 124 TKALGTKDYYRVRTGIGRPPGRMDTADFVLKPFSSTEAKDLPFLISNAADATMMLVKEGL 183
Query: 178 VSFLNHIV 185
++
Sbjct: 184 LATQQRYH 191
>gi|50955305|ref|YP_062593.1| peptidyl-tRNA hydrolase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|68052929|sp|Q6ADQ8|PTH_LEIXX RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|50951787|gb|AAT89488.1| peptidyl-tRNA hydrolase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 193
Score = 207 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 107/190 (56%), Gaps = 4/190 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTIL 58
+++V GLGNPG Y RHN+G + +D + S K +A ++EG++ G R +L
Sbjct: 4 LWLVVGLGNPGPGYAATRHNVGQLVLDELASRDRLSFKTHKTNATVAEGRIVPGGPRFVL 63
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
KP T+MN SG + +++ FY L +V+ D+LD+ F TLRLK GGG GHNG++ +
Sbjct: 64 AKPNTYMNGSGGPVSQLLRFYSLEP-SRLIVVQDELDIPFDTLRLKFGGGHGGHNGVRDV 122
Query: 119 SEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+ G ++ R+R+G+GRPP HVL FS+ ER L ++ + A ++ +A
Sbjct: 123 IAEVGSGDFTRVRVGVGRPPGVQAAADHVLKGFSAAERKNLPILVADAADAVERIAAEGL 182
Query: 178 VSFLNHIVSV 187
+ N +
Sbjct: 183 TAAQNRFHTA 192
>gi|22298927|ref|NP_682174.1| peptidyl-tRNA hydrolase [Thermosynechococcus elongatus BP-1]
gi|34222743|sp|Q8DJ45|PTH_THEEB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|22295108|dbj|BAC08936.1| peptidyl-tRNA hydrolase [Thermosynechococcus elongatus BP-1]
Length = 205
Score = 207 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 106/190 (55%), Gaps = 9/190 (4%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKPQ 62
+ GLGNPG EY RHN+GF +D + + +++F E++E + G + L+KP
Sbjct: 8 IVGLGNPGIEYATTRHNVGFRVLDTLAQRYRVQLTQQRRFLGEVAEVLIQGQKVRLLKPT 67
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SGQSL ++NFYKLP LE LV+HDD DL G LRL+ G GHNG+KSI + C
Sbjct: 68 TYMNSSGQSLHALLNFYKLP-LERTLVVHDDADLPLGRLRLRLSGSTGGHNGIKSIIQHC 126
Query: 123 -GKNYKRLRIGIG------RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+ + RL++GI + + + VLG+FS+ E L ++D ++ L +
Sbjct: 127 HSQQFPRLKVGIAFGDRLQQQTGPRNAVPFVLGHFSATELAILPAVLDLAVDAIELSIQS 186
Query: 176 EDVSFLNHIV 185
+N
Sbjct: 187 GVEVAMNRYN 196
>gi|254787719|ref|YP_003075148.1| peptidyl-tRNA hydrolase [Teredinibacter turnerae T7901]
gi|259535283|sp|C5BT03|PTH_TERTT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|237687265|gb|ACR14529.1| aminoacyl-tRNA hydrolase [Teredinibacter turnerae T7901]
Length = 193
Score = 207 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 65/188 (34%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G ++ + P K + L G L+ P
Sbjct: 7 MIVGLGNPGTEYANTRHNAGQDFVENLARALGQPLVNTPKHFGFTTRISLAGKDVRLLVP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ++ + NF+K+ +N LV+HD+LDL GT +LK GGG GHNGL+ I
Sbjct: 67 TTFMNRSGQAVASLANFFKIAP-DNILVVHDELDLPPGTAKLKIGGGHGGHNGLRDIIAA 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N + RLRIGIG P + + +VL + E + R+L L +
Sbjct: 126 LGNNKEFGRLRIGIGHPGNAKQVASYVLKKAPADEYRLIEDAQTAAERTLTDLVAGDWEK 185
Query: 180 FLNHIVSV 187
+ + +
Sbjct: 186 AMRELHTA 193
>gi|114331140|ref|YP_747362.1| peptidyl-tRNA hydrolase [Nitrosomonas eutropha C91]
gi|122313983|sp|Q0AGY5|PTH_NITEC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|114308154|gb|ABI59397.1| peptidyl-tRNA hydrolase [Nitrosomonas eutropha C91]
Length = 195
Score = 207 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 66/186 (35%), Positives = 97/186 (52%), Gaps = 3/186 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHNIG +DR+ +F + L+KP
Sbjct: 7 LVVGLGNPGDKYTSTRHNIGSDWLDRLADAQRVSFALDIRFRGLCARIVQSDTDIWLLKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG S+ + +YK+ E LV+HD+LDL G ++LK+GGG GHNGLKSI
Sbjct: 67 QTYMNASGMSVGAMCRYYKITP-EQILVVHDELDLQPGIIKLKSGGGTGGHNGLKSIVAD 125
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ RLRIG+G P D ++ +VL E + ID+ + PL+A+ +
Sbjct: 126 LSTQVFWRLRIGVGHPGDRNQVVDYVLHLPRREEAALIDEAIDHSIQVWPLIARGNFAAA 185
Query: 181 LNHIVS 186
+ + +
Sbjct: 186 MQQLHT 191
>gi|32266994|ref|NP_861026.1| peptidyl-tRNA hydrolase [Helicobacter hepaticus ATCC 51449]
gi|46576744|sp|Q7VG29|PTH_HELHP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|32263046|gb|AAP78092.1| peptidyl-tRNA hydrolase [Helicobacter hepaticus ATCC 51449]
Length = 223
Score = 207 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 67/169 (39%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
+VAGLGNP +Y RHNIGFM +D + F ++ KKF+AE+ + + +K
Sbjct: 4 LLVAGLGNPSAKYQNTRHNIGFMVLDFLSKELDFDFSFDKKFNAEVGAINIGPHKVFFLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+++ + ++ + + VIHDD+D+ FG +R K GG GHNGLKSI
Sbjct: 64 PQTFMNLSGEAINPFVRYFDIT---HTFVIHDDIDIGFGDMRFKYGGSSGGHNGLKSIDS 120
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G Y RLR G+GR + +++ +VL +F++ ER L +I + ++
Sbjct: 121 FMGDTYFRLRFGVGRSANK-NVVEYVLSDFNAQEREQLEGLIAHAKEAV 168
>gi|150006996|ref|YP_001301739.1| peptidyl-tRNA hydrolase [Parabacteroides distasonis ATCC 8503]
gi|255015968|ref|ZP_05288094.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_1_7]
gi|298377421|ref|ZP_06987374.1| aminoacyl-tRNA hydrolase [Bacteroides sp. 3_1_19]
gi|301308836|ref|ZP_07214788.1| aminoacyl-tRNA hydrolase [Bacteroides sp. 20_3]
gi|166229429|sp|A6L8V3|PTH_PARD8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|149935420|gb|ABR42117.1| peptidyl-tRNA hydrolase [Parabacteroides distasonis ATCC 8503]
gi|298265835|gb|EFI07495.1| aminoacyl-tRNA hydrolase [Bacteroides sp. 3_1_19]
gi|300833360|gb|EFK63978.1| aminoacyl-tRNA hydrolase [Bacteroides sp. 20_3]
Length = 187
Score = 207 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 97/186 (52%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF ++ + ++++ I+ ++ I++KP
Sbjct: 3 YLITGLGNIGSEYWGTRHNIGFRVVNHLVESVGGNFTEERY-GAIARIRVKNCDLIVLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ + +P +EN L++ DDL L FGTLRLK G DAGHNGLK+I++
Sbjct: 62 NTFMNLSGNAVRYWLQKENIP-VENLLIVVDDLALPFGTLRLKPKGSDAGHNGLKNIAQL 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ Y RLR GIG I +VLG F E + I+D +
Sbjct: 121 LNTQEYSRLRFGIGSDFPRGGQIDYVLGKFPPEELQLMPEILDRATEIIKSFCLAGIQIT 180
Query: 181 LNHIVS 186
+N +
Sbjct: 181 MNQFNN 186
>gi|73748435|ref|YP_307674.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. CBDB1]
gi|289432482|ref|YP_003462355.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. GT]
gi|119390933|sp|Q3ZX09|PTH_DEHSC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|73660151|emb|CAI82758.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. CBDB1]
gi|288946202|gb|ADC73899.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. GT]
Length = 189
Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats.
Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY NRHN+GF C+ R + KK + G+++ +L K
Sbjct: 1 MKLIIGLGNPGKEYSGNRHNVGFQCLSRFAKENHISFDKKCCLSRTGSGRINDEEIVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ +++ Y L + +V+ DDLDL G LRL+ GG GHNG+ SI
Sbjct: 61 PQTYMNLSGKAVNQLLRRYNLK-ATDIIVVQDDLDLPAGKLRLRLGGSAGGHNGVSSIIT 119
Query: 121 KCG-KNYKRLRIGIGRPP---DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G K + RL+IGIG+P + A ++ HVLGNF ER + I A +L L
Sbjct: 120 DIGTKEFIRLKIGIGKPDARNNGAEVVDHVLGNFGGEEREIIETAIARAAEALACLITSG 179
Query: 177 DVSFLNHIV 185
+ N
Sbjct: 180 LDTASNRFN 188
>gi|255551384|ref|XP_002516738.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
gi|223544111|gb|EEF45636.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
Length = 253
Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNI--------GFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG 53
+++ GLGNPG++Y RHN+ GF ID+I + A I G +
Sbjct: 51 WLIVGLGNPGNKYHGTRHNVTNASLDLVGFEMIDKIAKAEAVAMNTIQSKALIGIGCIKE 110
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
+ +L+KPQ +MN SG+S+ + Y++P L + L+I+D++ L G +RL+ GG HN
Sbjct: 111 VPILLVKPQAYMNFSGESVGPLAAHYQVP-LRHILLIYDEMSLPNGVMRLQPKGGHGHHN 169
Query: 114 GLKSISEKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G+KS+ E + + RL IGIG PP T + +L FSS ER + + ++
Sbjct: 170 GVKSVMEHLDGCREFPRLCIGIGNPPGTMDMRAFLLQKFSSTEREQIDAALGQGIDAVRT 229
Query: 172 LAKREDVSFLNHIVSVRK 189
L + +K
Sbjct: 230 LVLSGFNQNITRFNLGQK 247
>gi|225011225|ref|ZP_03701684.1| Aminoacyl-tRNA hydrolase [Flavobacteria bacterium MS024-3C]
gi|225004639|gb|EEG42602.1| Aminoacyl-tRNA hydrolase [Flavobacteria bacterium MS024-3C]
Length = 188
Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G EY E RHNIGF ++ + H +K +++ ++ G IL+KP
Sbjct: 4 FLIVGLGNIGAEYAETRHNIGFKIVEALAHKHEQSFETQKL-GDLATVKIKGRSLILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG++++ M K+P +EN LV+ DD+ L FG++RLK G D GHNGLK I E
Sbjct: 63 STYMNLSGKAVMYWMEKEKIP-MENVLVVTDDIHLPFGSIRLKAKGSDGGHNGLKDIQEN 121
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y R R G+G + +VLG +S ER L ++ A +
Sbjct: 122 LNTVQYNRYRFGVGADFGAGRQVDYVLGEWSVEEREKLKERLEKSAALIESFVLAGLART 181
Query: 181 LNHIVS 186
+N +
Sbjct: 182 MNQFNN 187
>gi|147669215|ref|YP_001214033.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. BAV1]
gi|189038288|sp|A5FRL3|PTH_DEHSB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146270163|gb|ABQ17155.1| peptidyl-tRNA hydrolase [Dehalococcoides sp. BAV1]
Length = 189
Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats.
Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY NRHN+GF C+ R + KK + G+++ +L K
Sbjct: 1 MKLIIGLGNPGKEYSGNRHNVGFQCLSRFAKENHISFDKKCCLSRTGSGRINDEEIVLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ +++ Y L + +V+ DDLDL G LRL+ GG GHNG+ SI
Sbjct: 61 PQTYMNLSGKAVNQLLRRYNLK-AADIIVVQDDLDLPAGKLRLRLGGSAGGHNGVSSIIT 119
Query: 121 KCG-KNYKRLRIGIGRPP---DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G K + RL+IGIG+P + A ++ HVLGNF ER + I A +L L
Sbjct: 120 DIGTKEFIRLKIGIGKPDARNNGAEVVDHVLGNFGGEEREIIETAIARAAEALACLITSG 179
Query: 177 DVSFLNHIV 185
+ N
Sbjct: 180 LDTASNRFN 188
>gi|312129855|ref|YP_003997195.1| peptidyl-tRNA hydrolase [Leadbetterella byssophila DSM 17132]
gi|311906401|gb|ADQ16842.1| peptidyl-tRNA hydrolase [Leadbetterella byssophila DSM 17132]
Length = 186
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 69/182 (37%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHN GF+ +DR+ + + HA ++E + LIKP
Sbjct: 3 YLIVGLGNIGPEYVLTRHNAGFIVLDRMA-IDRGLKFTLQRHALVTEFSFKSHQITLIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG++L MN K+ E LV+ DDL L G LR+K G AGHNGLK+I +
Sbjct: 62 TTYMNLSGKALAYWMNQLKITP-EQVLVLVDDLALPLGKLRMKEKGSSAGHNGLKNIQQI 120
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ Y RLRIGIG + VLG F+ E L P ID +
Sbjct: 121 LNTDQYPRLRIGIGDDFPKGRQVDFVLGKFTEDELITLSPKIDKAIEMILSFCTIGITRT 180
Query: 181 LN 182
+N
Sbjct: 181 MN 182
>gi|212691831|ref|ZP_03299959.1| hypothetical protein BACDOR_01326 [Bacteroides dorei DSM 17855]
gi|237708037|ref|ZP_04538518.1| peptidyl-tRNA hydrolase [Bacteroides sp. 9_1_42FAA]
gi|237724812|ref|ZP_04555293.1| peptidyl-tRNA hydrolase [Bacteroides sp. D4]
gi|265756186|ref|ZP_06090515.1| peptidyl-tRNA hydrolase [Bacteroides sp. 3_1_33FAA]
gi|212665587|gb|EEB26159.1| hypothetical protein BACDOR_01326 [Bacteroides dorei DSM 17855]
gi|229437007|gb|EEO47084.1| peptidyl-tRNA hydrolase [Bacteroides dorei 5_1_36/D4]
gi|229457865|gb|EEO63586.1| peptidyl-tRNA hydrolase [Bacteroides sp. 9_1_42FAA]
gi|263233777|gb|EEZ19386.1| peptidyl-tRNA hydrolase [Bacteroides sp. 3_1_33FAA]
Length = 187
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 93/185 (50%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF +D + + + + L G + IL+KP
Sbjct: 3 YLITGLGNIGEEYRNTRHNIGFTVLDALAKASN-LVFTDGRYGATATLSLKGRQLILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M +P LEN LV+ DDL L FGTLRLK G DAGHNGLK I+
Sbjct: 62 STYMNLSGNAVRYWMQKENIP-LENVLVVVDDLALPFGTLRLKGKGSDAGHNGLKHIAAT 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y RLR GIG I VLG+F+ + + + +
Sbjct: 121 LGTQDYARLRFGIGNDFPRGGQIDFVLGHFTDKDLKTMDERVATACDIIKSFCLAGISIT 180
Query: 181 LNHIV 185
+N
Sbjct: 181 MNQYN 185
>gi|291320749|ref|YP_003516014.1| peptidyl tRNA hydrolase [Mycoplasma agalactiae]
gi|290753085|emb|CBH41061.1| Peptidyl tRNA hydrolase [Mycoplasma agalactiae]
Length = 188
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG+EY RHN GF+ ID+I K+KF+ E + IL K
Sbjct: 1 MKLIVGLGNPGNEYRFTRHNAGFLAIDKICEKLNISLNKEKFNGEF----VVSDGFILAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG + + +FYK+ N + +VI+DDL G +K GG AGH G+ S+
Sbjct: 57 PLTYMNKSGDFVYSIASFYKI-NPSDIIVIYDDLSFSIGQAAIKIGGSSAGHKGIDSLMS 115
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K ++KR+R+GIG T I +VL F+ E + +++ +A + L +
Sbjct: 116 KFSSNDFKRIRVGIGVNSGT-TIKDYVLSLFTKDEMIVVEEVLEKVADAAISLVYNDVNF 174
Query: 180 FLNHIVSVRK 189
+N + K
Sbjct: 175 VMNKFNTDNK 184
>gi|149369576|ref|ZP_01889428.1| peptidyl-tRNA hydrolase [unidentified eubacterium SCB49]
gi|149357003|gb|EDM45558.1| peptidyl-tRNA hydrolase [unidentified eubacterium SCB49]
Length = 234
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++AGLGN G +Y RHNIGF +D I H +W+ +I+ + G IL+KP
Sbjct: 50 FLIAGLGNIGPKYENTRHNIGFKVLDYIAK-HEDLSWETVKLGDITTLKKKGRTFILLKP 108
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ ++ K+ ++EN LV+ DDL+L FGT R+KT G GHNGLK I
Sbjct: 109 STFMNLSGKAVKYWLDKEKI-SVENLLVVTDDLNLPFGTFRIKTQGSSGGHNGLKDIQAT 167
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y R R GI + +VLG +++ E L+ ++ +++ +
Sbjct: 168 LGNGKYPRFRFGISDAFAKGRQVDYVLGEWTAQEESELIERLEKAKQAVESFGLAGASNT 227
Query: 181 LNHIV 185
+N
Sbjct: 228 MNAFN 232
>gi|29655128|ref|NP_820820.1| peptidyl-tRNA hydrolase [Coxiella burnetii RSA 493]
gi|161831131|ref|YP_001597665.1| peptidyl-tRNA hydrolase [Coxiella burnetii RSA 331]
gi|46576785|sp|Q83AP0|PTH_COXBU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038287|sp|A9NAT7|PTH_COXBR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|29542397|gb|AAO91334.1| peptidyl-tRNA hydrolase [Coxiella burnetii RSA 493]
gi|161762998|gb|ABX78640.1| peptidyl-tRNA hydrolase [Coxiella burnetii RSA 331]
Length = 187
Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 100/187 (53%), Gaps = 7/187 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++AGLGNPG +Y RHN+G ++ + K KFH +++ L+K
Sbjct: 6 KLIAGLGNPGDQYARTRHNVGAWFLETLAQQRNQSLAKENKFHGFVAKCN----DYWLLK 61
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + +FYK+ E L+ HD+LD G +RLK GGG GHNGL++I +
Sbjct: 62 PTTFMNESGQAVAALAHFYKIKPSE-ILIAHDELDFPAGDIRLKEGGGHGGHNGLRNIIQ 120
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ RLRIGI P + +VL S +R +L I+ R +P L + +
Sbjct: 121 HLGSSDFYRLRIGINHPGHKDRVTPYVLSPPSENDRIAILAAIEKGLRLIPELVQGDFQK 180
Query: 180 FLNHIVS 186
+ + S
Sbjct: 181 VMRELHS 187
>gi|326692374|ref|ZP_08229379.1| peptidyl-tRNA hydrolase [Leuconostoc argentinum KCTC 3773]
Length = 189
Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 103/185 (55%), Gaps = 2/185 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G +Y + RHNIGFM +D + H K A ++ + G + +L+K
Sbjct: 1 MKYIIGLGNIGSKYEQTRHNIGFMAVDAFAAAHQVAFSPSKHFALTAKVTVAGEQVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ V++++ ++ LV+ DD+DL FG LR + G GHNGLKSI
Sbjct: 61 PTTYMNDSGKAVRAVLDYFGGAIDDDVLVLVDDMDLPFGKLRFRGKGSAGGHNGLKSIMA 120
Query: 121 KC-GKNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ + RL+ G+G P D +I +VLG F+ E + ++D ++ K DV
Sbjct: 121 HTDSQTFLRLKFGLGHPERDKQAVINYVLGKFTPAEMPAVEQMLDRSVAAMTDWIKGADV 180
Query: 179 SFLNH 183
+ L++
Sbjct: 181 AQLSN 185
>gi|242040937|ref|XP_002467863.1| hypothetical protein SORBIDRAFT_01g035470 [Sorghum bicolor]
gi|241921717|gb|EER94861.1| hypothetical protein SORBIDRAFT_01g035470 [Sorghum bicolor]
Length = 241
Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats.
Identities = 67/184 (36%), Positives = 91/184 (49%), Gaps = 7/184 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GF ID P F A EG +DG+ ++ KP
Sbjct: 37 WLFVGLGNPGEKYQSTRHNVGFDMIDAFAQSQGIPLTTHYFKALFGEGMVDGVPVLIAKP 96
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S+ + +YKLP L LV DD+DL G LRL+ GG HNG+ ++
Sbjct: 97 QTYMNLSGESVGPLAAYYKLP-LNRVLVAFDDMDLPCGVLRLQPKGGFGRHNGILNLCNS 155
Query: 122 CGK-----NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
N+ L +GIGRPP VL F+ R + I L ++A R
Sbjct: 156 TLPCVDFWNFFSL-VGIGRPPGQMDPKAFVLQKFNRTGRERIDSAIREGVNILKMVATRG 214
Query: 177 DVSF 180
Sbjct: 215 LTEA 218
>gi|239948214|ref|ZP_04699967.1| peptidyl-tRNA hydrolase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239922490|gb|EER22514.1| peptidyl-tRNA hydrolase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 176
Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats.
Identities = 84/175 (48%), Positives = 113/175 (64%), Gaps = 2/175 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHNIGF+ I++I + + KKKF+ EI+E DG + I I
Sbjct: 1 MILVIGLGNPGKEYQYTRHNIGFIAIEKIAEQYNLSFSTKKKFNCEIAETISDGQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + + + VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNIHSAK-IFVIHDDIDLETGRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G NY R+RIG+GRP + +VL NFS PE L ID IA + L+ +
Sbjct: 120 GVIGNNYNRIRIGVGRPQSNQDVADYVLNNFSKPEYETALQAIDIIANNFDLILR 174
>gi|297562916|ref|YP_003681890.1| peptidyl-tRNA hydrolase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847364|gb|ADH69384.1| peptidyl-tRNA hydrolase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 221
Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats.
Identities = 76/188 (40%), Positives = 112/188 (59%), Gaps = 6/188 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++V GLGNPG +Y NRHN GF+ ++ + WK K HAE+ E +LDG+ +L K
Sbjct: 37 WLVVGLGNPGPKYAGNRHNAGFLVVEALA---GGERWKAHKAHAEVVETRLDGVPVVLAK 93
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG + + FYK+P +E +V+HD++D+DFG L+LK GGG GHNGLKS++
Sbjct: 94 PRSFMNLSGGPVSGLARFYKVP-VERIVVVHDEMDIDFGALKLKKGGGPGGHNGLKSMTS 152
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+Y R+R G+GRPP +VL +FSS ER L ++ A ++ +
Sbjct: 153 SLSSPDYIRVRFGVGRPPGRMDPAAYVLKDFSSTERAELDLNVERAADAVRTVLTEGLGR 212
Query: 180 FLNHIVSV 187
N +
Sbjct: 213 AQNIYHTA 220
>gi|319953433|ref|YP_004164700.1| peptidyl-tRNA hydrolase [Cellulophaga algicola DSM 14237]
gi|319422093|gb|ADV49202.1| peptidyl-tRNA hydrolase [Cellulophaga algicola DSM 14237]
Length = 209
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 63/186 (33%), Positives = 97/186 (52%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY + RHNIGF +D++ K ++ +L G +L+KP
Sbjct: 25 YLIIGLGNIGPEYAQTRHNIGFKVLDKLAELEDLNFETAKL-GAVTTLKLKGRSVLLLKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG++L M +P LEN LVI DD++LD+G +R+KT G + GHNGLK I
Sbjct: 84 STYMNLSGKALQYWMEKENIP-LENVLVITDDINLDYGVIRVKTKGSNGGHNGLKDIQNV 142
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
NY R R G+G + +VLG ++ E+ + ++ A +
Sbjct: 143 LNSANYNRFRFGVGADFGKGKQVDYVLGKWNDDEKAAMPERLERSAELIKSFVLAGITIT 202
Query: 181 LNHIVS 186
+N +
Sbjct: 203 MNQYNN 208
>gi|192361428|ref|YP_001981163.1| peptidyl-tRNA hydrolase [Cellvibrio japonicus Ueda107]
gi|190687593|gb|ACE85271.1| peptidyl-tRNA hydrolase [Cellvibrio japonicus Ueda107]
Length = 247
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 91/187 (48%), Gaps = 4/187 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G ++ + K+ + G L+ P
Sbjct: 58 LLVGLGNPGSEYERTRHNAGADLVELLARQLGATLVPDSKYAGLTARVNYQGRDLRLLIP 117
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQS+ + NF+K+ E LV HD+LDL G+ R K GGG GHNGL+ I
Sbjct: 118 TTYMNRSGQSVGALANFFKIAP-EAILVAHDELDLPPGSARFKQGGGHGGHNGLRDIIAA 176
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N ++RLR+GIG P D + VL + E+ + ID LP +
Sbjct: 177 LGNNNNFRRLRLGIGHPGDAKLVANFVLKRAPASEQELIDNAIDRAIACLPDAINGDWDK 236
Query: 180 FLNHIVS 186
+ ++ +
Sbjct: 237 AMKNLHT 243
>gi|95930455|ref|ZP_01313191.1| Aminoacyl-tRNA hydrolase [Desulfuromonas acetoxidans DSM 684]
gi|95133495|gb|EAT15158.1| Aminoacyl-tRNA hydrolase [Desulfuromonas acetoxidans DSM 684]
Length = 191
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 65/179 (36%), Positives = 103/179 (57%), Gaps = 2/179 (1%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
+AGLGNPG Y RHN+GFM +D++ + H KK G+ G + +L++PQT
Sbjct: 3 IAGLGNPGERYAVTRHNVGFMVVDQLAARHQISLKKKGHQGLYGIGRCGGQQVMLLQPQT 62
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
FMNLSG S+ + + + +VIHD++DL FG +R+K GGG GHNGL+ I +
Sbjct: 63 FMNLSGASVASACKSLDVTSG-DLVVIHDEIDLPFGEVRIKQGGGHGGHNGLRHIDQALS 121
Query: 124 -KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
++Y R+R+G+ RPP A + +VL +FS+ E+ L ++ A + + + +
Sbjct: 122 TRDYIRVRVGVDRPPAGADVAAYVLKSFSASEKKQLTTVLMYAAEIVEAIIDQGLQKAM 180
>gi|262201498|ref|YP_003272706.1| peptidyl-tRNA hydrolase [Gordonia bronchialis DSM 43247]
gi|262084845|gb|ACY20813.1| peptidyl-tRNA hydrolase [Gordonia bronchialis DSM 43247]
Length = 188
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 73/189 (38%), Positives = 107/189 (56%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTIL 58
M I+ GLGNPG Y + RHN+G M D + + WK K+ AE++ L G ++
Sbjct: 1 MKIIVGLGNPGSRYEKTRHNVGAMVADALVASAG-ERWKVHKRSGAEVASITLAGQSVLV 59
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
KP+T+MN SG+ + + FY + + +V HD+LD+DFG +RLK GGG+ GHNGL+SI
Sbjct: 60 AKPRTYMNESGRQIGPLCKFYSVGPA-DLIVAHDELDIDFGAVRLKRGGGEGGHNGLRSI 118
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
S+ G ++Y R+R+GIGRPP VL F + R + +I N ++ LL R
Sbjct: 119 SQVIGTRDYLRVRLGIGRPPGRQDPADFVLKPFPTAARAEVELLIGNGCDAVELLVARSL 178
Query: 178 VSFLNHIVS 186
N +
Sbjct: 179 EDAQNTAHA 187
>gi|223038742|ref|ZP_03609035.1| peptidyl-tRNA hydrolase [Campylobacter rectus RM3267]
gi|222880144|gb|EEF15232.1| peptidyl-tRNA hydrolase [Campylobacter rectus RM3267]
Length = 186
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 116/191 (60%), Gaps = 10/191 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY + RHNIGFM IDR+ + +F KF E+ + Q +L+K
Sbjct: 1 MILIVGLGNPGPEYSKTRHNIGFMLIDRLKNSNFTDVSSAKFQGELFKFQ----NLLLLK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+S+ V +FYK E +VIHDDLDL+FG ++ K GGG+ GHNGLKSI
Sbjct: 57 PATFMNLSGRSVKAVADFYK---PERVIVIHDDLDLNFGVVKFKKGGGNGGHNGLKSIDA 113
Query: 121 KCGKNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G +Y+R+RIGIGR + HVLG F++ E+ L I+ +L L K +
Sbjct: 114 LIGADYERVRIGIGRSAHKGESAVTGHVLGEFNAEEKEGLEKILGYCEDALKELIKTDID 173
Query: 179 SFLNHIVSVRK 189
++ SV+K
Sbjct: 174 -AVSQKFSVKK 183
>gi|46199526|ref|YP_005193.1| peptidyl-tRNA hydrolase [Thermus thermophilus HB27]
gi|55981557|ref|YP_144854.1| peptidyl-tRNA hydrolase [Thermus thermophilus HB8]
gi|68052894|sp|Q5SHZ2|PTH_THET8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|68052973|sp|Q72IA8|PTH_THET2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|46197152|gb|AAS81566.1| peptidyl-tRNA hydrolase [Thermus thermophilus HB27]
gi|55772970|dbj|BAD71411.1| peptidyl-tRNA hydrolase [Thermus thermophilus HB8]
Length = 183
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 61/177 (34%), Positives = 100/177 (56%), Gaps = 11/177 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF+V G GNPG Y RHN+GFM +DR+ +++ + A ++E + + +K
Sbjct: 1 MFLVVGQGNPGERYARTRHNLGFMVLDRL-----GLSFRPRGEALVAEAEGG----LFLK 51
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+ NL+G+++ + FYK+P E LV+HD++DL G +R K GG AG+ G+ SI E
Sbjct: 52 PLTYYNLTGRAVAPLARFYKIPP-ERILVVHDEMDLPLGRIRFKAGGSAAGNRGVLSIEE 110
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G + + RLR+GIG+PPD + +VL F E + +++ ++ +
Sbjct: 111 ALGTRAFHRLRLGIGKPPDPSRGAEYVLSPFREEELPVVERVLEAAKEAVWCWVREG 167
>gi|312880021|ref|ZP_07739821.1| peptidyl-tRNA hydrolase [Aminomonas paucivorans DSM 12260]
gi|310783312|gb|EFQ23710.1| peptidyl-tRNA hydrolase [Aminomonas paucivorans DSM 12260]
Length = 204
Score = 206 bits (526), Expect = 9e-52, Method: Composition-based stats.
Identities = 67/195 (34%), Positives = 94/195 (48%), Gaps = 10/195 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG-QLDGLRTILI 59
M +V GLGNPG EY +RHN G++ +D I K +F A EG +G R +
Sbjct: 1 MKLVVGLGNPGPEYVWSRHNAGWIALDGILQRLGAGKPKLRFEASFWEGLPYEGERCSFL 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG S+ E + ++ LP + LV++DD+ L FG +RL+ G G G+ SI
Sbjct: 61 KPLTYMNRSGLSVREAVRYFDLPP-SSVLVVYDDVSLPFGKIRLREQGSAGGQKGMVSIL 119
Query: 120 EKCGK-NYKRLRIGIGRPP-------DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
G RLRIGIG PP + VLG F ER P++D + L
Sbjct: 120 GALGTLEVPRLRIGIGEPPPQNAPEGPKRELAPWVLGTFGRRERDLWDPLLDRCHEAFRL 179
Query: 172 LAKREDVSFLNHIVS 186
++ +
Sbjct: 180 WLTLGFPQAMSRVND 194
>gi|315127048|ref|YP_004069051.1| peptidyl-tRNA hydrolase [Pseudoalteromonas sp. SM9913]
gi|315015562|gb|ADT68900.1| peptidyl-tRNA hydrolase [Pseudoalteromonas sp. SM9913]
Length = 194
Score = 206 bits (526), Expect = 9e-52, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 102/189 (53%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GL NPG EY RHN G I + + + K+H + + G L+ P
Sbjct: 6 MLVGLANPGPEYANTRHNAGAWFIQELAARYNCTLKHDPKYHGLTGKVIIQGKEFKLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + NF+K+P +E+ LV HD+LDLD G +LK GGG GHNGLK I K
Sbjct: 66 TTYMNLSGKAVSSLANFFKIP-VEDILVAHDELDLDPGVAKLKKGGGHGGHNGLKDIIAK 124
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K++ RLRIG+G P + VLG + ++ + +D R + +LAK +
Sbjct: 125 MANQKDFMRLRIGVGHPGHREMVTGWVLGKAAKDDQEKMDAAVDEAVRCMEILAKDGVLK 184
Query: 180 FLNHIVSVR 188
N + S +
Sbjct: 185 AQNRLHSFK 193
>gi|317486442|ref|ZP_07945269.1| peptidyl-tRNA hydrolase [Bilophila wadsworthia 3_1_6]
gi|316922352|gb|EFV43611.1| peptidyl-tRNA hydrolase [Bilophila wadsworthia 3_1_6]
Length = 198
Score = 206 bits (526), Expect = 9e-52, Method: Composition-based stats.
Identities = 66/191 (34%), Positives = 105/191 (54%), Gaps = 7/191 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS--FHFFPAWKKKFHAEISEGQLDG--LRTIL 58
++ GLGNPG +Y RHN+GF+ +D + + KF E+ + L G + ++
Sbjct: 6 LIVGLGNPGKQYESTRHNMGFLFVDELLREAKNVSSMSGDKFRCELWKAALPGSPDQWLI 65
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
KPQTFMNLSG+ + + +++L EN LV+HD+LD+ G ++ K GGG+AGHNGLKSI
Sbjct: 66 AKPQTFMNLSGECVQPLAAWHRLLP-ENILVVHDELDIAPGRMKFKKGGGNAGHNGLKSI 124
Query: 119 SEKCGK-NYKRLRIGIGR-PPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
+++ G ++ RLR+GIGR P + VLG S + + + L A+
Sbjct: 125 TQRLGTPDFYRLRLGIGRSPHGGEDTVNWVLGRLSPEAQDAFRKQLPAAFEVVRLFAEGN 184
Query: 177 DVSFLNHIVSV 187
+ + +
Sbjct: 185 IPAATHAANAF 195
>gi|171464202|ref|YP_001798315.1| Aminoacyl-tRNA hydrolase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|238692825|sp|B1XS66|PTH_POLNS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|171193740|gb|ACB44701.1| Aminoacyl-tRNA hydrolase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 196
Score = 206 bits (526), Expect = 9e-52, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG E+ E+RHN GF +D + +K+FH ++++ + +G L+K
Sbjct: 3 KLIVGLGNPGEEHEEDRHNAGFWFVDALAKQLGVRFESEKRFHGKVAKAKWEGEDLFLLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSGQS+ + F+K+ + LV+ D+LD+ G+ RLK GGG GHNGLK I
Sbjct: 63 PSTYMNLSGQSVGALCRFHKIMPA-DILVVQDELDIKPGSARLKLGGGTGGHNGLKDIQA 121
Query: 121 KCGK-NYKRLRIGIGRP------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
NY RLR+GIG P + +VL E+ + I+N L L
Sbjct: 122 HLSTPNYWRLRLGIGHPRDIAGDGRPMDVADYVLRRPQLTEQKLINTSIENGLNILSLFL 181
Query: 174 KREDVSFLNHIVS 186
K + + + + S
Sbjct: 182 KGDTQTAMMELHS 194
>gi|163841716|ref|YP_001626121.1| peptidyl-tRNA hydrolase [Renibacterium salmoninarum ATCC 33209]
gi|189038160|sp|A9WU36|PTH_RENSM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|162955192|gb|ABY24707.1| peptidyl-tRNA hydrolase [Renibacterium salmoninarum ATCC 33209]
Length = 194
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 74/191 (38%), Positives = 108/191 (56%), Gaps = 5/191 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTILI 59
++V GLGNPG +Y RHNIGFM + + S K A ++EG+L G + +L
Sbjct: 5 WLVVGLGNPGPDYSHTRHNIGFMVAEELASRIGASFKSNKSRALVAEGRLGMGGPKLVLA 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQTFMNLSG + FY L +N + + D++D+ F T++LK GGG+ GHNGL+ IS
Sbjct: 65 KPQTFMNLSGGPTSALAKFYDL-GADNVIAVQDEIDIPFNTIKLKIGGGEGGHNGLRDIS 123
Query: 120 EKCG-KNYKRLRIGIGRPPDT-AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+ G K Y R+R+G+GRPP HVL FS+ E+ L +I + A ++ LL
Sbjct: 124 KALGAKEYLRVRVGVGRPPGGQGDAAGHVLKVFSTAEKKELPFLIQDAADAVELLISDGL 183
Query: 178 VSFLNHIVSVR 188
++ +
Sbjct: 184 LAAQQKFHPAK 194
>gi|323700582|ref|ZP_08112494.1| peptidyl-tRNA hydrolase [Desulfovibrio sp. ND132]
gi|323460514|gb|EGB16379.1| peptidyl-tRNA hydrolase [Desulfovibrio desulfuricans ND132]
Length = 205
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 67/192 (34%), Positives = 100/192 (52%), Gaps = 9/192 (4%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHF------FPAWKKKFHAEISEGQLDGLRTI 57
+ GLGNPG EY RHNIGFM +D + ++ ++ + + G +
Sbjct: 7 IVGLGNPGPEYANTRHNIGFMLVDHLLQLAGERKSMHLEKIEESGDYDLWQCKFAGAFRL 66
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MNLSG+++ + + + + +V+HD+LDL G ++ K GG D GHNGLKS
Sbjct: 67 LAKPLTYMNLSGKAVARICGRHAIEPG-DLVVVHDELDLPVGRMKFKRGGSDNGHNGLKS 125
Query: 118 ISEKCGK-NYKRLRIGIGRPPDTAHII-RHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
I E+ G ++ RLR+GIGRP D I VL F L II + A+ L + +R
Sbjct: 126 IQERLGTPDFHRLRLGIGRPADQYKPIPDWVLEPFDPQSAAHLPEIIAHAAKGLDIFFRR 185
Query: 176 EDVSFLNHIVSV 187
H+ +
Sbjct: 186 GMGFAQQHVNAF 197
>gi|300770849|ref|ZP_07080726.1| aminoacyl-tRNA hydrolase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762122|gb|EFK58941.1| aminoacyl-tRNA hydrolase [Sphingobacterium spiritivorum ATCC 33861]
Length = 186
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 70/185 (37%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY + RHNIGFM D + + K HA +E + G +IKP
Sbjct: 3 YLIVGLGNIGREYQDTRHNIGFMVADELVAQAGGSFSTLK-HAYYAEYKQRGHNVYVIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M K+P + N LVI DDL L FGT+RLK G AGHNGLKSI
Sbjct: 62 TTYMNLSGKAVNFWMQQLKVP-IANLLVIVDDLALPFGTIRLKPKGSSAGHNGLKSIEAL 120
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
C G+ Y RLR GI +VL F + E+ L +I+ +
Sbjct: 121 CGGQAYPRLRFGISDNFPKGRQADYVLAPFDNDEQKELPALIERSVQMANSFINIGIELT 180
Query: 181 LNHIV 185
+ ++
Sbjct: 181 MTNMN 185
>gi|170289079|ref|YP_001739317.1| aminoacyl-tRNA hydrolase [Thermotoga sp. RQ2]
gi|238688752|sp|B1LBD6|PTH_THESQ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|170176582|gb|ACB09634.1| Aminoacyl-tRNA hydrolase [Thermotoga sp. RQ2]
Length = 186
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 62/186 (33%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
V GLGNPG Y RHN+GF+ +D + + WK + + ++ L G L+KP T
Sbjct: 3 VVGLGNPGPRYAFTRHNVGFLFLDFLKNK----DWKTEKYFAWNKINLAGNEVALVKPLT 58
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
+MNLSG ++ V+ F+ +L++ +V++DD+ L G +R++ G D GHNG+KSI + G
Sbjct: 59 YMNLSGLAMPHVLKFFS-ASLDDIIVVYDDVSLKLGKIRIRKKGSDGGHNGMKSIIQALG 117
Query: 124 -KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
+ KR+R+GIG P+ ++ VLG FS E L + + + +L ++ ++
Sbjct: 118 TQEIKRIRVGIGDKPEGMDLVDFVLGEFSDEEWIILNKVFEVMKEALEVILVEGIEKAMS 177
Query: 183 HIVSVR 188
S+
Sbjct: 178 IYNSLE 183
>gi|153206248|ref|ZP_01945511.1| peptidyl-tRNA hydrolase [Coxiella burnetii 'MSU Goat Q177']
gi|165918157|ref|ZP_02218243.1| peptidyl-tRNA hydrolase [Coxiella burnetii RSA 334]
gi|212217814|ref|YP_002304601.1| peptidyl-tRNA hydrolase [Coxiella burnetii CbuK_Q154]
gi|226694250|sp|B6J9D9|PTH_COXB1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|120577378|gb|EAX34002.1| peptidyl-tRNA hydrolase [Coxiella burnetii 'MSU Goat Q177']
gi|165918017|gb|EDR36621.1| peptidyl-tRNA hydrolase [Coxiella burnetii RSA 334]
gi|212012076|gb|ACJ19456.1| peptidyl-tRNA hydrolase [Coxiella burnetii CbuK_Q154]
Length = 187
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 99/187 (52%), Gaps = 7/187 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++AGLGNPG +Y RHN+G ++ + K KFH +++ L+K
Sbjct: 6 KLIAGLGNPGDQYARTRHNVGAWFLETLAQQRNQSLAKENKFHGFVAKCN----DYWLLK 61
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ++ + FYK+ E L+ HD+LD G +RLK GGG GHNGL++I +
Sbjct: 62 PTTFMNESGQAVAALARFYKIKPSE-ILIAHDELDFPAGDIRLKEGGGHGGHNGLRNIIQ 120
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ RLRIGI P + +VL S +R +L I+ R +P L + +
Sbjct: 121 HLGSSDFYRLRIGINHPGYKDRVTPYVLSPPSENDRIAILAAIEKGLRLIPELVQGDFQK 180
Query: 180 FLNHIVS 186
+ + S
Sbjct: 181 VMRELHS 187
>gi|256384077|gb|ACU78647.1| aminoacyl-tRNA hydrolase [Mycoplasma mycoides subsp. capri str.
GM12]
gi|256384909|gb|ACU79478.1| aminoacyl-tRNA hydrolase [Mycoplasma mycoides subsp. capri str.
GM12]
gi|296455255|gb|ADH21490.1| aminoacyl-tRNA hydrolase [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 186
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY + RHN GF+ ID + + + + K++F++ I ++ + +L+K
Sbjct: 1 MKVIIGLGNIGKEYEKTRHNAGFIAIDLLLEKYNYSSVKQEFNSLIYTTMINNQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +++NFYK+ +L + ++IHDD DL+ ++ K G AGHNG+KSI
Sbjct: 61 PLTFMNNSGIAVRQIINFYKI-DLNDLIIIHDDKDLNISRIQFKKDGSSAGHNGIKSIIN 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+N+ RLRIG+ + P I+ VL FS E L + + +
Sbjct: 120 NLQTQNFYRLRIGVNQVPKEWKIVDWVLSKFSDEELNLLKQSFIDKIEFINDFTNNKTFI 179
Query: 180 F-LNHIV 185
+ +N
Sbjct: 180 YLMNKYN 186
>gi|328956314|ref|YP_004373647.1| peptidyl-tRNA hydrolase [Coriobacterium glomerans PW2]
gi|328456638|gb|AEB07832.1| peptidyl-tRNA hydrolase [Coriobacterium glomerans PW2]
Length = 212
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 67/163 (41%), Positives = 94/163 (57%), Gaps = 9/163 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLR------- 55
++AGLGNPG EY E RHN GF +D + WK + AE++ L R
Sbjct: 11 MIAGLGNPGEEYSETRHNAGFQTVDELARRWQVTYWKNQLGAEVATIALSDERAGGEARE 70
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L+KPQ+FMN SG + ++ Y + E LVIHD+LD+ G +R+K GGG AGHNGL
Sbjct: 71 VVLVKPQSFMNTSGGPISKLAAAYGIEPGE-LLVIHDELDIPAGDVRVKIGGGHAGHNGL 129
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYF 157
+SI +K G +++ R+R+GIG+PP + VL F E
Sbjct: 130 RSIIDKLGSRDFARIRVGIGKPPGKMSVADFVLRRFRPREAEE 172
>gi|154148461|ref|YP_001406854.1| peptidyl-tRNA hydrolase [Campylobacter hominis ATCC BAA-381]
gi|166199320|sp|A7I2W3|PTH_CAMHC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|153804470|gb|ABS51477.1| peptidyl-tRNA hydrolase [Campylobacter hominis ATCC BAA-381]
Length = 220
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 78/177 (44%), Positives = 103/177 (58%), Gaps = 9/177 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG+EY +HNIGFM ID + S F KF E+ +L+K
Sbjct: 1 MILIVGLGNPGNEYKNTKHNIGFMLIDELLSSDFSSLKSSKFQGEL----FKKGEILLLK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG S+ V +FYK E +VIHDDLDL+FG LR K GG GHNG+KSI
Sbjct: 57 PQTFMNLSGNSVKAVNDFYK---PERIIVIHDDLDLNFGALRFKRGGSSGGHNGIKSIDN 113
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G +Y+R+RIGIGR + VL F++ E L+ I+ +++ L K +
Sbjct: 114 LIGNDYERVRIGIGR--GQGNAANIVLSKFNNDEDKKLVEILSTAKKAVEFLIKNDI 168
>gi|307721572|ref|YP_003892712.1| peptidyl-tRNA hydrolase [Sulfurimonas autotrophica DSM 16294]
gi|306979665|gb|ADN09700.1| peptidyl-tRNA hydrolase [Sulfurimonas autotrophica DSM 16294]
Length = 184
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 75/179 (41%), Positives = 100/179 (55%), Gaps = 8/179 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y RHNIGFM +D + H F E+ + Q L+K
Sbjct: 1 MLIVGLGNPGSDYENTRHNIGFMVVDELIRRHNAVKLSSSSFQGELYKFQNH----FLLK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+++V FYKL E+ +VIHDDLDL FG LR K GGG GHNGLKSI
Sbjct: 57 PLTYMNLSGESVIKVKQFYKL---EDVVVIHDDLDLSFGALRFKKGGGHGGHNGLKSIDS 113
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K + Y R+R+GIG+P I +VL F+ E+ L I+ ++ L
Sbjct: 114 KISREYIRVRMGIGKPEHKGEIASYVLSPFNQTEQKCLQEWINKSCDAVEFLLTNSLED 172
>gi|163753733|ref|ZP_02160856.1| peptidyl-tRNA hydrolase [Kordia algicida OT-1]
gi|161325947|gb|EDP97273.1| peptidyl-tRNA hydrolase [Kordia algicida OT-1]
Length = 213
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 93/185 (50%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G EY RHNIGF +D K ++ + G I +KP
Sbjct: 29 FLIVGLGNIGSEYENTRHNIGFKIVDFFAKKEELTFKTDKL-GDLCTYKFKGRTFIFLKP 87
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M K+P +EN L+I DDL+L+FGT+R+KT G D GHNGLKSI
Sbjct: 88 STYMNLSGKAVRYWMTKEKIP-VENILIITDDLNLEFGTIRVKTKGSDGGHNGLKSIQAL 146
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y R R GI + +VLG +++ E L ++ + +
Sbjct: 147 LNTTKYPRFRFGISADFGKGRQVNYVLGEWNAEEEAKLPERLEKSVELIKSFGTAGVSNT 206
Query: 181 LNHIV 185
+N+
Sbjct: 207 MNNFN 211
>gi|212703169|ref|ZP_03311297.1| hypothetical protein DESPIG_01210 [Desulfovibrio piger ATCC 29098]
gi|212673435|gb|EEB33918.1| hypothetical protein DESPIG_01210 [Desulfovibrio piger ATCC 29098]
Length = 197
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 99/187 (52%), Gaps = 10/187 (5%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRI---HSFHF---FPAWKKKFHAEISEGQLDG--LR 55
V GLGNPG++Y RHN GF ++ + KF E+ + G
Sbjct: 7 VVGLGNPGNQYAGTRHNCGFAFVESLLDHARREGGQVQSQNGGKFSCELWRLRYGGLPGD 66
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+ PQTFMNLSGQ + ++ ++K+ + +V+HD+LD+ G LR K GGG+AGHNGL
Sbjct: 67 WLAAMPQTFMNLSGQCVQPLLAWHKIRP-DQLVVVHDELDIPAGELRFKKGGGNAGHNGL 125
Query: 116 KSISEKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
KSI++ ++ RLRIGIGRPP +I VLG S + + D L + AK
Sbjct: 126 KSITQMLATPDFYRLRIGIGRPPQKGDVINWVLGRPCSEDADKIRTATDKALEVLEIFAK 185
Query: 175 REDVSFL 181
+ + +
Sbjct: 186 KGLEAAV 192
>gi|227832713|ref|YP_002834420.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
gi|262182798|ref|ZP_06042219.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
gi|227453729|gb|ACP32482.1| Peptidyl-tRNA hydrolase [Corynebacterium aurimucosum ATCC 700975]
Length = 226
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 5/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCI-DRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+++ GLGNPG +Y RHN+G+M + D + ++ +L G + + ++
Sbjct: 40 WLIVGLGNPGAKYAATRHNVGYMAVDDLLAKSGDMLEPVTGHQLSAAQLELGGTKVVALR 99
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
T+MNLSG + + + EN +VIHD+LDL G +R+K GG + GHNGLKS+SE
Sbjct: 100 SHTYMNLSGDPIAPLAAQLGVA-AENIIVIHDELDLPAGKVRIKKGGNENGHNGLKSLSE 158
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G ++Y R+RIGIGRPP I VL + L I A + L+
Sbjct: 159 RLGTRDYLRVRIGIGRPPKGGSIPDWVLAPVDAS--AELDSTIATAAEAARLIVAEGLNK 216
Query: 180 FLNHIVSVRK 189
I S K
Sbjct: 217 AQQEIHSRSK 226
>gi|42561470|ref|NP_975921.1| peptidyl-tRNA hydrolase [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|68052964|sp|Q6MS28|PTH_MYCMS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|42492969|emb|CAE77563.1| Peptidyl-tRNA hydrolase [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|301321053|gb|ADK69696.1| aminoacyl-tRNA hydrolase [Mycoplasma mycoides subsp. mycoides SC
str. Gladysdale]
Length = 186
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY + RHN GF+ ID + + + + K++F++ I ++ + +L+K
Sbjct: 1 MKVIIGLGNIGKEYEKTRHNAGFIAIDLLLEKYNYSSVKQEFNSLIYTTIINNQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +++NFYK+ NL + ++IHDD DL+ ++ K G AGHNG+KSI
Sbjct: 61 PLTFMNNSGLAVRQIINFYKI-NLNDLIIIHDDKDLNISRIQFKKDGSSAGHNGIKSIIN 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+N+ RLRIG+ + P I+ VL FS E L + + +
Sbjct: 120 NLQTQNFYRLRIGVNQVPKEWKIVDWVLSKFSDEELNLLKQSFIDKIEFINDFTNNKTFI 179
Query: 180 F-LNHIV 185
+ +N
Sbjct: 180 YLMNKYN 186
>gi|71909344|ref|YP_286931.1| peptidyl-tRNA hydrolase [Dechloromonas aromatica RCB]
gi|119390931|sp|Q479M0|PTH_DECAR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71848965|gb|AAZ48461.1| peptidyl-tRNA hydrolase [Dechloromonas aromatica RCB]
Length = 192
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 68/188 (36%), Positives = 97/188 (51%), Gaps = 10/188 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN+GF +D++ + KF + T L++P
Sbjct: 6 LIVGLGNPGPEYEATRHNVGFWFVDQLADKLKVSLAPQAKFFGRAART----GETWLLQP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ++ + NFYK+P + LVIHD+LDL G +RLK GGG+ GHNGLK I K
Sbjct: 62 TTFMNRSGQAVAALANFYKIP-ADEILVIHDELDLPPGGIRLKQGGGNGGHNGLKDIQAK 120
Query: 122 CGK-NYKRLRIGIGRPPD---TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G ++ RLR+GIG P + ++ VL E + + + P LA +
Sbjct: 121 LGTPDFWRLRLGIGHPRTLNLSQQVVDFVLHQPRKEELPDIEHALARCLLAWPKLAAGDF 180
Query: 178 VSFLNHIV 185
+
Sbjct: 181 AGAQQQLH 188
>gi|229819487|ref|YP_002881013.1| peptidyl-tRNA hydrolase [Beutenbergia cavernae DSM 12333]
gi|229565400|gb|ACQ79251.1| peptidyl-tRNA hydrolase [Beutenbergia cavernae DSM 12333]
Length = 199
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 107/193 (55%), Gaps = 9/193 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD-------GL 54
++V G+GNPG +Y NRHN G M D + S K A + +G+L G
Sbjct: 6 WLVVGIGNPGPQYAGNRHNAGAMAADVLASRIGSAFTTHKARAAVVDGRLGTLPGGVPGP 65
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R I+ KP T++NLSG + + FY +P E LV++D+LDL TLRLK GGG+ GHNG
Sbjct: 66 RVIVAKPATYVNLSGGPVAALSTFYDIP-AERLLVVYDELDLPAHTLRLKLGGGEGGHNG 124
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
L+SIS G ++Y RLRIGIGRPP VL +FS+ ER L ++ A ++ +
Sbjct: 125 LRSISAALGTRDYVRLRIGIGRPPGRQDPADFVLRDFSAAERVELGVTLEQAADAVEDVV 184
Query: 174 KREDVSFLNHIVS 186
++ + +
Sbjct: 185 VHGHLAAQGRLHT 197
>gi|189425649|ref|YP_001952826.1| peptidyl-tRNA hydrolase [Geobacter lovleyi SZ]
gi|238692128|sp|B3E6F9|PTH_GEOLS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189421908|gb|ACD96306.1| Aminoacyl-tRNA hydrolase [Geobacter lovleyi SZ]
Length = 193
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 76/184 (41%), Positives = 106/184 (57%), Gaps = 3/184 (1%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
+AGLGNPG +Y RHN GF+ +DRI +K+F +E + G R +L+KPQT
Sbjct: 6 IAGLGNPGSKYQWTRHNAGFLFLDRIAQLEGLSIVRKQFGGLTAEWERKGKRLVLLKPQT 65
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
FMNLSG+S++ + FYKL + +V+HD++DL G RLK GGG G NGL+SI E G
Sbjct: 66 FMNLSGRSVMPALQFYKLKP-DQLIVVHDEIDLALGAARLKQGGGHGGQNGLRSIMELLG 124
Query: 124 K-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
K ++ RLR+GIGRPP + HVLG F+ PE ++D L ++
Sbjct: 125 KGDFVRLRLGIGRPPH-GDVTNHVLGVFTPPEMEIFARVLDGALDMLETALDEGVPKAMS 183
Query: 183 HIVS 186
+
Sbjct: 184 LFNN 187
>gi|94500014|ref|ZP_01306549.1| peptidyl-tRNA hydrolase [Oceanobacter sp. RED65]
gi|94427872|gb|EAT12847.1| peptidyl-tRNA hydrolase [Oceanobacter sp. RED65]
Length = 195
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 70/189 (37%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G ++ + + +KKFH + Q+ G L+ P
Sbjct: 7 LIVGLGNPGSEYENTRHNAGAWLLNEVARRYGVQLKPEKKFHGLCGKAQIKGQDVFLLFP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ++ + NFYK+P + LV+HD+LDL G R K GGG G NGLK I K
Sbjct: 67 TTFMNRSGQAVQALANFYKIP-VNQILVVHDELDLPSGIARFKQGGGHGGQNGLKDIISK 125
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RLRIGIG P D + HVLG + E+ + ID A + +
Sbjct: 126 MANDKNFYRLRIGIGHPGDKTKVTGHVLGKPNKDEQNKIEAAIDAAADEIDSAVSGDWSG 185
Query: 180 FLNHIVSVR 188
+N + + +
Sbjct: 186 AMNRLHTFK 194
>gi|15644374|ref|NP_229426.1| peptidyl-tRNA hydrolase [Thermotoga maritima MSB8]
gi|7388026|sp|Q9X1W1|PTH_THEMA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|4982199|gb|AAD36693.1|AE001806_3 peptidyl-tRNA hydrolase [Thermotoga maritima MSB8]
Length = 186
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 62/186 (33%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
V GLGNPG Y RHN+GF+ +D + + WK + + ++ L G L+KP T
Sbjct: 3 VVGLGNPGPRYAFTRHNVGFLFLDFLKNK----DWKTEKYFAWNKINLAGNEVALVKPLT 58
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
+MNLSG ++ V+ F+ +L++ +V++DD+ L G +R++ G D GHNG+KSI + G
Sbjct: 59 YMNLSGLAMPHVLKFFS-ASLDDIIVVYDDVSLKLGKIRIRKKGSDGGHNGMKSIIQALG 117
Query: 124 -KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
+ KR+R+GIG P+ ++ VLG FS E L + + + +L ++ ++
Sbjct: 118 TQEIKRIRVGIGDKPEGMDLVNFVLGEFSDEEWIILNKVFEVMKEALEVILVEGIEKAMS 177
Query: 183 HIVSVR 188
S+
Sbjct: 178 IYNSLE 183
>gi|320354571|ref|YP_004195910.1| peptidyl-tRNA hydrolase [Desulfobulbus propionicus DSM 2032]
gi|320123073|gb|ADW18619.1| peptidyl-tRNA hydrolase [Desulfobulbus propionicus DSM 2032]
Length = 196
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 7/190 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG EY +RHNIGF +D + +K G+ G + +KP
Sbjct: 6 FLLVGLGNPGREYHLSRHNIGFFFLDHLAGLQGLLIETQKMQGLYCHGRAHGHQLYFLKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+S+ ++++K+P L N L++HDD+DL G ++L GG GHNG++S+++
Sbjct: 66 QTYMNRSGESVRSFVDYFKIP-LCNLLILHDDIDLSAGRIKLVAKGGAGGHNGVRSVAQH 124
Query: 122 CG-KNYKRLRIGIGRP-----PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G + RL+IG+GRP + + VLG E +A ++ + +
Sbjct: 125 LGTTEFARLKIGVGRPVVDEVGQGQPVDQFVLGRMGDAEMSLFEQRKTLVAEAVAVFIQE 184
Query: 176 EDVSFLNHIV 185
+N I
Sbjct: 185 GVDRCMNRIN 194
>gi|322433961|ref|YP_004216173.1| peptidyl-tRNA hydrolase [Acidobacterium sp. MP5ACTX9]
gi|321161688|gb|ADW67393.1| peptidyl-tRNA hydrolase [Acidobacterium sp. MP5ACTX9]
Length = 206
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY HN GF+ IDR+ ++ A + + G +L K
Sbjct: 1 MRLIVGLGNPGIEYQFTPHNAGFLAIDRLAEVFGTAVNNRRGKALTGKAVISGQEVLLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+TFMNLSG S+ ++ L + + +V++D+L + G LR++ G GHNG+KSIS
Sbjct: 61 PETFMNLSGLSVAALLQELGLSHQSDLIVLYDELAIPLGQLRIRERGSAGGHNGVKSISG 120
Query: 121 KCG-KNYKRLRIGIGRPPD------TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
G + + R+RIG+G+ P A + ++L L ++D +++ +
Sbjct: 121 VLGSEEWTRIRIGVGKQPTETGREIKAGGVDYLLSPMRRMMLQELDLVLDETVKAVETIL 180
Query: 174 KREDVSFLNHIV 185
K + +N
Sbjct: 181 KEGVKAAMNKFN 192
>gi|312885933|ref|ZP_07745564.1| peptidyl-tRNA hydrolase [Mucilaginibacter paludis DSM 18603]
gi|311301594|gb|EFQ78632.1| peptidyl-tRNA hydrolase [Mucilaginibacter paludis DSM 18603]
Length = 186
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 77/189 (40%), Positives = 96/189 (50%), Gaps = 11/189 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFH----AEISEGQLDGLRTI 57
+++ GLGN G EY + RHNIGFM +D++ +KFH A +E + G
Sbjct: 3 YLIVGLGNIGPEYADTRHNIGFMILDQLVKEEN-----EKFHNMRLAYYAEVKYKGRMLH 57
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
LIKP T+MNLSG +L MN K+P LEN LV+ DDL L GTLRLK G AGHNGLK
Sbjct: 58 LIKPTTYMNLSGNALRYWMNELKVP-LENVLVLVDDLALPLGTLRLKPKGSAAGHNGLKH 116
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
I G NY RLR GI I +VL F E+ L +ID + A
Sbjct: 117 IEATLGHNNYARLRFGISDNFPKGRQIDYVLDAFDKDEQPELPALIDRSIEMIKSFATAG 176
Query: 177 DVSFLNHIV 185
+
Sbjct: 177 TELTMTRFN 185
>gi|281412601|ref|YP_003346680.1| peptidyl-tRNA hydrolase [Thermotoga naphthophila RKU-10]
gi|281373704|gb|ADA67266.1| peptidyl-tRNA hydrolase [Thermotoga naphthophila RKU-10]
Length = 186
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 63/186 (33%), Positives = 105/186 (56%), Gaps = 6/186 (3%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
V GLGNPG Y RHN+GF+ +D + + WK + + S +L G L+KP T
Sbjct: 3 VVGLGNPGPRYAFTRHNVGFLFLDFLKNK----DWKTEKYFAWSRIKLAGNDVALVKPLT 58
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
+MNLSG ++ V+ F+ +L++ +V++DD+ L G +R++ G D GHNG+KSI ++ G
Sbjct: 59 YMNLSGLAMPHVLKFFN-ASLDDIIVVYDDVSLKLGKIRIRKKGSDGGHNGMKSIIQELG 117
Query: 124 -KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
+ KR+R+GIG P+ ++ VLG FS E L + + + +L ++ ++
Sbjct: 118 TQEIKRIRVGIGDKPEGMDLVDFVLGEFSDGEWVILNKVFEMMKEALEVILVEGIEKAMS 177
Query: 183 HIVSVR 188
S+
Sbjct: 178 IYNSLE 183
>gi|212716157|ref|ZP_03324285.1| hypothetical protein BIFCAT_01073 [Bifidobacterium catenulatum DSM
16992]
gi|225351842|ref|ZP_03742865.1| hypothetical protein BIFPSEUDO_03443 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|212661524|gb|EEB22099.1| hypothetical protein BIFCAT_01073 [Bifidobacterium catenulatum DSM
16992]
gi|225157089|gb|EEG70428.1| hypothetical protein BIFPSEUDO_03443 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 199
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 10/193 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD----GLRTI 57
+++AGLGNPG +Y RHN+GFM D + K A + +G ++ ++
Sbjct: 6 WLIAGLGNPGSKYEGTRHNMGFMAADLLAERWSVNFSDHKGLAMLGKGVMNLSGRNVKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SG +L + +Y++ ++ +VIHDD+DLDFG +++K GG GHNG+KS
Sbjct: 66 LAKPLTYMNESGNALASISAYYQIEP-DHIVVIHDDMDLDFGRIKVKAGGSAGGHNGIKS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDT----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I G Y R+R+G+G + + VLG F +R L + + A + +
Sbjct: 125 IDRALGTPKYARVRMGVGHAQRGAHAHDNTVNWVLGGFGPDQRKQLPEFLADGADAAETI 184
Query: 173 AKREDVSFLNHIV 185
Sbjct: 185 IFNGLAKAQEQFN 197
>gi|258404968|ref|YP_003197710.1| peptidyl-tRNA hydrolase [Desulfohalobium retbaense DSM 5692]
gi|257797195|gb|ACV68132.1| peptidyl-tRNA hydrolase [Desulfohalobium retbaense DSM 5692]
Length = 197
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 6/185 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKF--HAEISEGQLDG--LRTIL 58
++ GLGNPG +Y RHN GF+ +D + P + + ++ G L L
Sbjct: 8 LIVGLGNPGPQYARTRHNCGFLVLDALRRHTPSPCREVVLPVRGRVWRWEVPGSVLPWGL 67
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+ P T+MN SG+++ E+ L E +V+HD+LDL FGTLRLK GGG AGH GL+SI
Sbjct: 68 LTPLTYMNRSGEAVAELCQTMGLGP-EQLVVVHDELDLPFGTLRLKQGGGLAGHRGLQSI 126
Query: 119 SEKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+ + + RLR+GIGRP + ++ HVL FS E+ L + + + +L R
Sbjct: 127 ANCLQSREFTRLRVGIGRPTEGVGVVDHVLSPFSLEEQAHLEELCERGSSALQAYCTRGF 186
Query: 178 VSFLN 182
S +
Sbjct: 187 ESAQD 191
>gi|262384249|ref|ZP_06077384.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_1_33B]
gi|262293952|gb|EEY81885.1| peptidyl-tRNA hydrolase [Bacteroides sp. 2_1_33B]
Length = 187
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 64/186 (34%), Positives = 96/186 (51%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF ++ + ++++ I+ ++ I++KP
Sbjct: 3 YLITGLGNIGSEYWGTRHNIGFRVVNHLVESVGGNFTEERY-GAIARIRVKNCDLIVLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ + +P +EN L++ DDL L F TLRLK G DAGHNGLK+I++
Sbjct: 62 NTFMNLSGNAVRYWLQKENIP-VENLLIVVDDLALPFATLRLKPKGSDAGHNGLKNIAQL 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ Y RLR GIG I +VLG F E + I+D +
Sbjct: 121 LNTQEYSRLRFGIGSDFPRGGQIDYVLGKFPPEELQLMPEILDRATEIIKSFCLAGIQIT 180
Query: 181 LNHIVS 186
+N +
Sbjct: 181 MNQFNN 186
>gi|256841993|ref|ZP_05547498.1| peptidyl-tRNA hydrolase [Parabacteroides sp. D13]
gi|256736309|gb|EEU49638.1| peptidyl-tRNA hydrolase [Parabacteroides sp. D13]
Length = 187
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 64/186 (34%), Positives = 96/186 (51%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF ++ + ++++ I+ ++ I++KP
Sbjct: 3 YLITGLGNIGSEYWGTRHNIGFRVVNHLVESVGGNFTEERY-GAIARIRVKNCDLIVLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ + + +EN L++ DDL L FGTLRLK G DAGHNGLK+I++
Sbjct: 62 NTFMNLSGNAVRYWLQKENIL-VENLLIVVDDLALPFGTLRLKPKGSDAGHNGLKNIAQL 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ Y RLR GIG I +VLG F E + I+D +
Sbjct: 121 LNTQEYSRLRFGIGSDFPRGGQIDYVLGKFPPEELQLMPEILDRATEIIKSFCLAGIQIT 180
Query: 181 LNHIVS 186
+N +
Sbjct: 181 MNQFNN 186
>gi|325280761|ref|YP_004253303.1| Peptidyl-tRNA hydrolase [Odoribacter splanchnicus DSM 20712]
gi|324312570|gb|ADY33123.1| Peptidyl-tRNA hydrolase [Odoribacter splanchnicus DSM 20712]
Length = 189
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 3/189 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY + RHNIGF +D ++ + + E +L G +L+KP
Sbjct: 3 YLIVGLGNIGPEYQDTRHNIGFNVLDAFAKASNA-VFEDMRYGAVCEMKLKGRTLVLLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M K+ L + LVI DDL L FG +RL+ G D GHNGLK+I+
Sbjct: 62 NTYMNLSGKAVSYWMQKEKIA-LADLLVIVDDLALPFGKMRLRAQGSDGGHNGLKNINAL 120
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + Y RLR GIG I +VLG + E L +++ + + +
Sbjct: 121 LGTSAYARLRFGIGNDFLKGQQIDYVLGTWQGEEAEKLPALLERGGEIITSFVLQGIIRT 180
Query: 181 LNHIVSVRK 189
+N + RK
Sbjct: 181 MNTFNTDRK 189
>gi|149280710|ref|ZP_01886820.1| peptidyl-tRNA hydrolase [Pedobacter sp. BAL39]
gi|149228534|gb|EDM33943.1| peptidyl-tRNA hydrolase [Pedobacter sp. BAL39]
Length = 200
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 90/185 (48%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF D + + A SE G R +IKP
Sbjct: 17 YLIVGLGNIGPEYAHTRHNIGFDIADELVKQLDGSFVNSRL-AYYSEVSFKGKRLHVIKP 75
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M+ ++P +EN LVI DDL L G LRLK G AGHNGLKSI
Sbjct: 76 TTYMNLSGKAVNYWMHELRIP-IENVLVIVDDLALPLGRLRLKLQGSSAGHNGLKSIEGL 134
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
C G+ Y RLR G+ + +VL F E+ L +ID +
Sbjct: 135 CGGQAYPRLRFGVSDNFPKGRQVDYVLAPFDKEEQPELPALIDKSVELIKSFVTVGPALT 194
Query: 181 LNHIV 185
+
Sbjct: 195 MTAFN 199
>gi|331703857|ref|YP_004400544.1| peptidyl tRNA hydrolase [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|328802412|emb|CBW54567.1| Peptidyl tRNA hydrolase [Mycoplasma mycoides subsp. capri LC str.
95010]
Length = 186
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGN G EY + RHN GF+ ID + + + K++F++ I ++ + +L+K
Sbjct: 1 MKVIIGLGNIGKEYEKTRHNAGFIAIDLLLEKCNYSSVKQEFNSLIYTTMINNQKVLLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +++NFYK+ +L + ++IHDD DL+ ++ K G AGHNG+KSI
Sbjct: 61 PLTFMNNSGIAVRQIINFYKI-DLNDLIIIHDDKDLNISRIQFKKDGSSAGHNGIKSIIN 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+N+ RLRIG+ + P I+ VL FS E L + + +
Sbjct: 120 NLQTQNFYRLRIGVNQVPKEWKIVDWVLSKFSDEELNLLKQSFIDKIEFINDFTNNKTFI 179
Query: 180 F-LNHIV 185
+ +N
Sbjct: 180 YLMNKYN 186
>gi|68536582|ref|YP_251287.1| peptidyl-tRNA hydrolase [Corynebacterium jeikeium K411]
gi|260577725|ref|ZP_05845660.1| peptidyl-tRNA hydrolase 2 (PTH 2) [Corynebacterium jeikeium ATCC
43734]
gi|119390905|sp|Q4JU38|PTH2_CORJK RecName: Full=Peptidyl-tRNA hydrolase 2; Short=PTH 2
gi|68264181|emb|CAI37669.1| pthB [Corynebacterium jeikeium K411]
gi|258604120|gb|EEW17362.1| peptidyl-tRNA hydrolase 2 (PTH 2) [Corynebacterium jeikeium ATCC
43734]
Length = 240
Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats.
Identities = 65/195 (33%), Positives = 106/195 (54%), Gaps = 11/195 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH---FFPAWKKKFHAEISEGQLDGLRTIL 58
+IV GLGNPG +Y + RHNIG+ IDR+ + + P +K HA + ++ +L
Sbjct: 48 WIVIGLGNPGAKYADTRHNIGYWPIDRLVERYEAQWLPVEGQKAHA--ALITVEETPVLL 105
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++ T+MN SG+++ + + LP E +V HD+LD+ G +R+K GG+ GHNGL+S+
Sbjct: 106 LRSTTYMNNSGEAVGPLASALSLP-AERIIVCHDELDIAAGQVRIKDKGGEGGHNGLRSM 164
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSS----PERYFLLPIIDNIARSLPLLA 173
+ + G Y R+R+GIGRPP +I VL F E ++ + + S+ L+
Sbjct: 165 TAELGTQHYVRVRMGIGRPPKGTSVIDFVLSPFEEADIDAENGWMENTLRDSVDSVTLIV 224
Query: 174 KREDVSFLNHIVSVR 188
N I + +
Sbjct: 225 NNGTDIARNDIHTRK 239
>gi|119025661|ref|YP_909506.1| peptidyl-tRNA hydrolase [Bifidobacterium adolescentis ATCC 15703]
gi|166199308|sp|A1A141|PTH_BIFAA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118765245|dbj|BAF39424.1| peptidyl-tRNA hydrolase [Bifidobacterium adolescentis ATCC 15703]
Length = 199
Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 10/193 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD----GLRTI 57
+++AGLGNPG +Y RHN+GFM D + K A + +G ++ ++
Sbjct: 6 WLIAGLGNPGSKYEGTRHNMGFMTADVLAERWSVNFSDHKGLAMLGKGVMNLSGRNVKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SG ++ + +Y++ ++ +VIHDD+DLDFG +++K GG GHNG+KS
Sbjct: 66 LAKPLTYMNESGNAVASISAYYQIEP-DHIVVIHDDMDLDFGRIKVKAGGSAGGHNGIKS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDT----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I G Y R+R+G+G + + VLG F +R L + + A + +
Sbjct: 125 IDRSLGTPKYARVRMGVGHAQRGAHAHDNTVNWVLGGFGPDQRKQLPEFLADGADAAETI 184
Query: 173 AKREDVSFLNHIV 185
Sbjct: 185 IFDGLAKAQERFN 197
>gi|154487168|ref|ZP_02028575.1| hypothetical protein BIFADO_01008 [Bifidobacterium adolescentis
L2-32]
gi|154085031|gb|EDN84076.1| hypothetical protein BIFADO_01008 [Bifidobacterium adolescentis
L2-32]
Length = 199
Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 10/193 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD----GLRTI 57
+++AGLGNPG +Y RHN+GFM D + K A + +G ++ ++
Sbjct: 6 WLIAGLGNPGSKYEGTRHNMGFMTADVLAERWSVNFSDHKGLAMLGKGVMNLSGRNVKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SG ++ + +Y++ ++ +VIHDD+DLDFG +++K GG GHNG+KS
Sbjct: 66 LAKPLTYMNESGNAVASISAYYQIEP-DHIVVIHDDMDLDFGRIKVKAGGSAGGHNGIKS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDT----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I G Y R+R+G+G + + VLG F +R L + + A + +
Sbjct: 125 IDRSLGTSKYARVRMGVGHAQRGAHAHDNTVNWVLGGFGPDQRKQLPEFLADGADAAETI 184
Query: 173 AKREDVSFLNHIV 185
Sbjct: 185 IFDGLAKAQERFN 197
>gi|256372366|ref|YP_003110190.1| peptidyl-tRNA hydrolase [Acidimicrobium ferrooxidans DSM 10331]
gi|256008950|gb|ACU54517.1| peptidyl-tRNA hydrolase [Acidimicrobium ferrooxidans DSM 10331]
Length = 192
Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats.
Identities = 62/185 (33%), Positives = 94/185 (50%), Gaps = 2/185 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
IV GLGNPG Y RHN G + +D + + + G+L R +L PQ
Sbjct: 2 IVVGLGNPGARYRFTRHNAGALTVDLLARRLDV-RLTPGHRSIVGSGRLGDHRAVLAVPQ 60
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG ++ V+ ++ + +V+HD+LDL G ++LK GGG AGHNGL+SI
Sbjct: 61 TYMNDSGAAVGAVLRYFHADPVTQLVVVHDELDLVLGRVQLKYGGGLAGHNGLRSIVAHI 120
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G +++ R+RIGIGRP ++ VL PER ++ A ++ L +
Sbjct: 121 GTRDFWRVRIGIGRPAGRQAVVDWVLTEVRGPERTSFDVGVERGADAVVDLVSLGPERAM 180
Query: 182 NHIVS 186
+
Sbjct: 181 TTYNA 185
>gi|229817917|ref|ZP_04448199.1| hypothetical protein BIFANG_03204 [Bifidobacterium angulatum DSM
20098]
gi|229784521|gb|EEP20635.1| hypothetical protein BIFANG_03204 [Bifidobacterium angulatum DSM
20098]
Length = 199
Score = 204 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 96/181 (53%), Gaps = 10/181 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD----GLRTI 57
+++AGLGNPG +Y RHN+GFM D + K A + +G + +
Sbjct: 6 WLIAGLGNPGSKYEGTRHNMGFMAADVLAERWSINFSDHKGLALLGKGVMSLDGRSQKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SG ++ + ++Y++ ++ +VIHDD+DLDFG +++K GG GHNG+KS
Sbjct: 66 LAKPLTYMNESGNAVASICSYYQIEP-DHVIVIHDDMDLDFGRIKVKAGGSAGGHNGIKS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDT----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I G Y R+R+G+G + + VLG F +R L + + A + +
Sbjct: 125 IDRSLGTPKYARVRMGVGHAKRGANAHDNTVNWVLGGFGPDQRKQLPDFLADGADAAEEI 184
Query: 173 A 173
Sbjct: 185 M 185
>gi|86140923|ref|ZP_01059482.1| peptidyl-tRNA hydrolase [Leeuwenhoekiella blandensis MED217]
gi|85832865|gb|EAQ51314.1| peptidyl-tRNA hydrolase [Leeuwenhoekiella blandensis MED217]
Length = 206
Score = 204 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 62/185 (33%), Positives = 95/185 (51%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G +Y RHNIGF ID +K +++ ++ G +L+KP
Sbjct: 22 YLIIGLGNIGPKYDNTRHNIGFKIIDAYAQEKETSWSTEKL-GDVAYTKVRGRTVVLLKP 80
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M + ++EN LVI DDL+L+FGT+R+K+ G D GHNGLK I +
Sbjct: 81 NTYMNLSGKAVKYWMQKENI-SIENILVITDDLNLEFGTIRVKSKGSDGGHNGLKDIQNQ 139
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y R R GIG I +VLG + E + +D + + +
Sbjct: 140 LSTTKYPRFRFGIGDRFSRGKQIDYVLGVWDKDEELDMPERMDISCKVIESFIASGIANT 199
Query: 181 LNHIV 185
+N
Sbjct: 200 MNAYN 204
>gi|325067353|ref|ZP_08126026.1| peptidyl-tRNA hydrolase [Actinomyces oris K20]
Length = 200
Score = 204 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 9/196 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQL-------DG 53
++V GLGNPG Y NRHN+G+M +D + + KK A ++EG+L G
Sbjct: 5 WLVVGLGNPGTRYARNRHNVGYMVLDVLAERTGSRFSQHKKARARVAEGRLSMMPGGAPG 64
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
R IL +P MNLSG + ++++Y + LVIHD+LDL LRLK GGG+ GHN
Sbjct: 65 PRVILAEPSVLMNLSGGPVAGLVSYYGIDPASRLLVIHDELDLPAHELRLKRGGGEGGHN 124
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GL+SIS+ K+Y RLR+GIGRPP VL +F ER L ++ A ++ +
Sbjct: 125 GLRSISKSISTKDYARLRVGIGRPPGRQDPSDFVLSDFPGRERADLGVTLEQAADAVEQV 184
Query: 173 AKREDVSFLNHIVSVR 188
+ + R
Sbjct: 185 VTVGFDDAQQRLHAPR 200
>gi|78224042|ref|YP_385789.1| peptidyl-tRNA hydrolase [Geobacter metallireducens GS-15]
gi|119390945|sp|Q39RR0|PTH_GEOMG RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78195297|gb|ABB33064.1| peptidyl-tRNA hydrolase [Geobacter metallireducens GS-15]
Length = 194
Score = 204 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 77/185 (41%), Positives = 107/185 (57%), Gaps = 3/185 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y RHN GFM +D + KK F EG G R +L+KPQ
Sbjct: 5 LIIGLGNPGPKYQWTRHNAGFMVLDHLSRVMGTSVAKKSFSGLYGEGSWHGDRLLLLKPQ 64
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S E + F+KL L + +VIHDDLD+ FG ++LK GGG GHNGL+S+ ++
Sbjct: 65 TFMNLSGRSAAEALRFHKL-TLSDLIVIHDDLDIPFGRVKLKEGGGHGGHNGLRSLMQEL 123
Query: 123 -GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G + R+RIG+GRP +VL NFSS E L ++D + L L + +
Sbjct: 124 GGGGFVRIRIGVGRPL-RGDAADYVLANFSSAEMAGLPALLDGVVDLLGELVRNGLPRTM 182
Query: 182 NHIVS 186
+ +
Sbjct: 183 SLYNN 187
>gi|88808009|ref|ZP_01123520.1| peptidyl-tRNA hydrolase [Synechococcus sp. WH 7805]
gi|88788048|gb|EAR19204.1| peptidyl-tRNA hydrolase [Synechococcus sp. WH 7805]
Length = 201
Score = 204 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 8/193 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG Y RHN+GF ++++ + H K +++ R L+ P
Sbjct: 1 MVVGLGNPGDRYASTRHNVGFRVLEQLAAQEHARFRAMAKLQGDLANIGAGPDRLRLLMP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+TFMN SG+S+ ++++ L +L +V+ DD+DL G LRL+ G GHNGLKS +
Sbjct: 61 KTFMNESGRSIRATLDWFGL-SLGQVIVLVDDMDLPLGRLRLRARGSAGGHNGLKSTIQH 119
Query: 122 CG-KNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G +++ RLRIGIG P A + HVLG FS E L ++ + L + ++
Sbjct: 120 LGTQDFARLRIGIGAPGRSPEERRARTVSHVLGAFSREEEPLLNEVLKEVLSGLERIQRQ 179
Query: 176 EDVSFLNHIVSVR 188
NHI ++
Sbjct: 180 GLERAGNHINALN 192
>gi|300858119|ref|YP_003783102.1| peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis FRC41]
gi|300685573|gb|ADK28495.1| Peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis FRC41]
gi|308276075|gb|ADO25974.1| Peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis I19]
Length = 186
Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats.
Identities = 64/178 (35%), Positives = 98/178 (55%), Gaps = 6/178 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF----PAWKKKFHAEISEGQLDGLRTI 57
F++ GLGNPG +Y RHN+G+M ID + + + KK + +E ++ + I
Sbjct: 5 FLIVGLGNPGPQYATTRHNVGYMAIDELLTRASPMPARLSAHKKTNMMAAETRIGNTKVI 64
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L P+ FMNLSG + + NF+ +P +V+ DDL+L+F ++ K GGGD GHNGL+S
Sbjct: 65 LATPRCFMNLSGGPVRSIANFFNIPP-SRVIVLFDDLELNFSEVKAKIGGGDHGHNGLRS 123
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+++ G K+Y R+ IGIGRPP VL FS E + + A + +
Sbjct: 124 VTQSLGTKDYFRVGIGIGRPPGRMEPKTFVLKPFSKKELLEIPIACADAADEVERIIT 181
>gi|83644561|ref|YP_432996.1| peptidyl-tRNA hydrolase [Hahella chejuensis KCTC 2396]
gi|119390948|sp|Q2SLA3|PTH_HAHCH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|83632604|gb|ABC28571.1| peptidyl-tRNA hydrolase [Hahella chejuensis KCTC 2396]
Length = 195
Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats.
Identities = 74/188 (39%), Positives = 104/188 (55%), Gaps = 4/188 (2%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+ GLGNPG +Y + RHN G + ++ + F KK H + + + G L+ P
Sbjct: 8 IVGLGNPGPDYAQTRHNAGALWLEHLARKKGQFLRPDKKLHGDYCKISIAGEDIHLLFPS 67
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMN SGQS+L + FYK+ LEN LV HD+LD+D GTLRLK GGG GHNGL+ I
Sbjct: 68 TFMNRSGQSVLSLSQFYKI-ELENILVAHDELDIDAGTLRLKFGGGHGGHNGLRDIIRCF 126
Query: 123 G--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G K++ R+R+GIG P D + + HVLG S + L + L + + +
Sbjct: 127 GGNKDFPRMRLGIGHPGDKSKVTSHVLGRISKEDMDKLESAFYQLDTHLEAIISGQWDTA 186
Query: 181 LNHIVSVR 188
+N + S R
Sbjct: 187 MNRLHSFR 194
>gi|307111354|gb|EFN59588.1| hypothetical protein CHLNCDRAFT_132968 [Chlorella variabilis]
Length = 301
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++++ GLGNPG ++ RHN G++ + + + + +AE++ +L G +L K
Sbjct: 48 LWLIVGLGNPGPQFAGTRHNAGWLVVAAVARLLDVAVDRFQANAEVARSRLAGKSVLLAK 107
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MNLSG+++ + +FY +P E LV++DDLDL GT+RL+ GG GH G+KS++
Sbjct: 108 PLTTMNLSGEAVAGLADFYHIPP-ERVLVVYDDLDLPTGTVRLRPRGGPGGHGGMKSVAA 166
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G N+ R+R+GIGRPP ++ HVL +F ER + + + +
Sbjct: 167 HLQGDNFPRIRLGIGRPPAGTTVLDHVLQDFGEAERLQVDAAVQQAVGVIRAVLSVGLER 226
Query: 180 FLN 182
++
Sbjct: 227 AVS 229
>gi|289207532|ref|YP_003459598.1| peptidyl-tRNA hydrolase [Thioalkalivibrio sp. K90mix]
gi|288943163|gb|ADC70862.1| peptidyl-tRNA hydrolase [Thioalkalivibrio sp. K90mix]
Length = 203
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 92/185 (49%), Gaps = 3/185 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y E RHN GF +D + + + +F E + L L+KP
Sbjct: 5 LIVGLGNPGPRYAETRHNAGFWFVDALARRYSTEFRSESRFDGEGARLTLPEGDCWLLKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+FMN SG + + +FY++ E LV+HD+LDLD G RLK GGG GHNGL+ +
Sbjct: 65 MSFMNKSGLPVRKCADFYRIAP-EEILVVHDELDLDPGVARLKMGGGHGGHNGLRDLHRH 123
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G NY RLR+GIG P ++ VL + + ID +P L
Sbjct: 124 MGGPNYARLRLGIGHPGHRDDVVPFVLDRPGRDDARAIEDAIDAALDQVPALIAGRWDEA 183
Query: 181 LNHIV 185
+ ++
Sbjct: 184 VRNLH 188
>gi|308176603|ref|YP_003916009.1| peptidyl-tRNA hydrolase [Arthrobacter arilaitensis Re117]
gi|307744066|emb|CBT75038.1| peptidyl-tRNA hydrolase [Arthrobacter arilaitensis Re117]
Length = 193
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 72/188 (38%), Positives = 107/188 (56%), Gaps = 4/188 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQ--LDGLRTILI 59
++VAGLGNPG Y NRHNIG M +D + ++I EG+ + G R +L
Sbjct: 6 WLVAGLGNPGAGYAGNRHNIGQMVLDELAQRVGSKFKTHASRSQIVEGRMGVGGPRIVLA 65
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP FMNLSG + F+ + ++ +V+HD++D+ F T++LK GGG+ GHNGL+ IS
Sbjct: 66 KPTVFMNLSGGPVANAAKFFGI-GVDRLIVVHDEIDIPFDTIKLKRGGGEGGHNGLRDIS 124
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G K+Y R+R G+GRPP + VL +FS E+ L +IDN A ++ LL
Sbjct: 125 KAMGSKDYLRVRAGVGRPPGRMDTAKWVLQDFSKAEKADLPFLIDNCADAVELLMTSGLE 184
Query: 179 SFLNHIVS 186
+ +
Sbjct: 185 AAQAKFHT 192
>gi|227528906|ref|ZP_03958955.1| aminoacyl-tRNA hydrolase [Lactobacillus vaginalis ATCC 49540]
gi|227351180|gb|EEJ41471.1| aminoacyl-tRNA hydrolase [Lactobacillus vaginalis ATCC 49540]
Length = 186
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 63/188 (33%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM ++++ +H K A G ++G + +++
Sbjct: 1 MKMIVGLGNIGTRYDETRHNTGFMVVEQLARDYHLGAFTHLKQEAVAVTGMINGEKVMIV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG+++ ++++Y + + V++DDLD+ G +RLKT G GHNGLKSI
Sbjct: 61 KPTTFMNDSGRAVGPLVDYYDIDLDDLV-VVNDDLDMPVGKVRLKTHGASGGHNGLKSII 119
Query: 120 EKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-D 177
G N + R+++GI P ++ HVLG F+ ER + +L E
Sbjct: 120 NALGTNKFNRIKVGIDHPKH-GTVVSHVLGKFTKEERPDFDQAVLTAEHALEDWINGENF 178
Query: 178 VSFLNHIV 185
+N
Sbjct: 179 AQLMNEYN 186
>gi|88810858|ref|ZP_01126115.1| peptidyl-tRNA hydrolase [Nitrococcus mobilis Nb-231]
gi|88792488|gb|EAR23598.1| peptidyl-tRNA hydrolase [Nitrococcus mobilis Nb-231]
Length = 202
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN GF +D I + ++KF ++ ++ + L+KP
Sbjct: 10 LLIGLGNPGPRYSRTRHNAGFWLLDEILRRFGGSFSTQRKFQGDVGRVRIGNIECHLLKP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG ++ + + +Y+L + LV +DD+DL G RLK GGG GHNGL+ +
Sbjct: 70 MTYMNHSGLAIGQFVRYYRLEP-RSILVAYDDIDLLPGVTRLKQGGGHGGHNGLRDTANA 128
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +++ RLRIG+G P +I +VL S E+ + I + LPL+ + +
Sbjct: 129 LGTRDFNRLRIGVGHPGHRDDVIGYVLSAPSREEQEAIEAGITDACGILPLVVEGDWGRA 188
Query: 181 LNHIVSV 187
+ SV
Sbjct: 189 FQRLHSV 195
>gi|145593349|ref|YP_001157646.1| aminoacyl-tRNA hydrolase [Salinispora tropica CNB-440]
gi|145302686|gb|ABP53268.1| peptidyl-tRNA hydrolase [Salinispora tropica CNB-440]
Length = 196
Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats.
Identities = 72/188 (38%), Positives = 109/188 (57%), Gaps = 5/188 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFH-AEISEGQ--LDGLRTIL 58
++V GLGNPG +Y NRHN+GF+ D + + K AE++EG+ L G R +L
Sbjct: 8 WLVVGLGNPGRQYAGNRHNVGFLVADLLVGRLGARFGRHKRAMAEVAEGRSGLGGPRLVL 67
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG ++ + FYK+P + ++D+LD+ +G +R+K GGG+ GHNGL+S+
Sbjct: 68 VKPLTYMNLSGAAVAGLAQFYKVPPA-RVVAVYDELDIPYGQVRVKFGGGEGGHNGLRSM 126
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
++ G K Y R+R GIGRPP VL +F + ER L ++D A + + R
Sbjct: 127 TKSLGTKEYARVRFGIGRPPARRDPADFVLSDFGTVERKELDFLVDRAADVVESVVLRGV 186
Query: 178 VSFLNHIV 185
N
Sbjct: 187 EPTQNLYH 194
>gi|157825997|ref|YP_001493717.1| peptidyl-tRNA hydrolase [Rickettsia akari str. Hartford]
gi|166229443|sp|A8GP84|PTH_RICAH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157799955|gb|ABV75209.1| peptidyl-tRNA hydrolase [Rickettsia akari str. Hartford]
Length = 185
Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats.
Identities = 80/186 (43%), Positives = 115/186 (61%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHNIGF+ I++I + + + KK+F+ EI+E DG + I I
Sbjct: 1 MILVIGLGNPGKEYQYTRHNIGFIAIEKIANQYNSSFSTKKQFNCEIAETISDGQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + + VIHDD+DL+ ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVISVKTYYNINPAK-IFVIHDDIDLETCRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY R+R+G+GRP + + ++L NF E + ID I + L+ + +
Sbjct: 120 GVIGNNYNRIRVGVGRPKNNQDVADYLLNNFLQSEYEIAMQAIDRIVNNFDLILENKLEK 179
Query: 180 FLNHIV 185
F N IV
Sbjct: 180 FKNKIV 185
>gi|309812802|ref|ZP_07706540.1| putative peptidyl-tRNA hydrolase [Dermacoccus sp. Ellin185]
gi|308433219|gb|EFP57113.1| putative peptidyl-tRNA hydrolase [Dermacoccus sp. Ellin185]
Length = 210
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 79/193 (40%), Positives = 114/193 (59%), Gaps = 9/193 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD-------GL 54
++V GLGNPG Y NRHN+G M ++R+ + K A +E +L G
Sbjct: 18 WLVVGLGNPGPRYAGNRHNVGAMVVERMAADAGVALRAHKARAAAAEIRLGTLPGGLPGP 77
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
+ +L P T+MN SG + +M F+K+P E +VIHD+LD+DFG +RLK GGG+ GHNG
Sbjct: 78 KVVLAVPSTYMNESGGPVSALMKFFKIP-AERLVVIHDELDIDFGAVRLKFGGGEGGHNG 136
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
L+SIS+ G K+Y R+R+GIGRPP + VL +FS+ ER L +I + A ++ LL
Sbjct: 137 LRSISKSIGTKDYLRVRLGIGRPPGRMEVSDFVLKDFSATERRELDFLIPSGAEAVELLV 196
Query: 174 KREDVSFLNHIVS 186
R N + +
Sbjct: 197 HRGLDDAQNLVHA 209
>gi|329948077|ref|ZP_08294978.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328523216|gb|EGF50317.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 200
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 105/196 (53%), Gaps = 9/196 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLD-------G 53
++V GLGNPG Y NRHN+G M +D + + KK A ++EG+L G
Sbjct: 5 WLVVGLGNPGTRYARNRHNVGHMVLDVLAERTGSRFSNHKKARARVAEGRLGMMPGGAPG 64
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
R IL +P MNLSG + ++++Y + LVIHD+LDL LRLK GGG+ GHN
Sbjct: 65 PRVILAEPSVLMNLSGGPVSGLVSYYGIDPTSRLLVIHDELDLPAHELRLKRGGGEGGHN 124
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GL+SIS+ K+Y RLR+GIGRPP VL +F ER L ++ A ++ +
Sbjct: 125 GLRSISKSVSTKDYARLRVGIGRPPGRQDPSDFVLSDFPGRERADLGVTLEQAADAVEQV 184
Query: 173 AKREDVSFLNHIVSVR 188
H+ + R
Sbjct: 185 VTLGFDDAQRHLHAPR 200
>gi|171743239|ref|ZP_02919046.1| hypothetical protein BIFDEN_02368 [Bifidobacterium dentium ATCC
27678]
gi|283455783|ref|YP_003360347.1| peptidyl-tRNA hydrolase [Bifidobacterium dentium Bd1]
gi|171278853|gb|EDT46514.1| hypothetical protein BIFDEN_02368 [Bifidobacterium dentium ATCC
27678]
gi|283102417|gb|ADB09523.1| Peptidyl-tRNA hydrolase [Bifidobacterium dentium Bd1]
Length = 199
Score = 203 bits (518), Expect = 7e-51, Method: Composition-based stats.
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 10/193 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD----GLRTI 57
+++AGLGNPG +Y RHN+GFM D + K A + +G ++ ++
Sbjct: 6 WLIAGLGNPGSKYEGTRHNMGFMTADLLAERWSVNFSDHKGLAMLGKGVMNLSGRNVKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SG ++ + ++Y++ + +V+HDD+DLDFG +++K+GG GHNG+KS
Sbjct: 66 LAKPLTYMNDSGNAVASISSYYQIEP-NHIVVVHDDMDLDFGRIKVKSGGSAGGHNGIKS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDT----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I G Y R+R+G+G + + VLG F +R L + + A + +
Sbjct: 125 IDRSLGTPKYARVRMGVGHAQRGAHAHDNTVNWVLGGFGPDQRKQLPEFLADGADAAETI 184
Query: 173 AKREDVSFLNHIV 185
Sbjct: 185 IFDGLAKAQEQFN 197
>gi|302330398|gb|ADL20592.1| Peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis 1002]
Length = 186
Score = 203 bits (518), Expect = 7e-51, Method: Composition-based stats.
Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 6/178 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF----PAWKKKFHAEISEGQLDGLRTI 57
F++ GLGNPG +Y RHN+G+M ID + + + KK + ++ ++ + I
Sbjct: 5 FLIVGLGNPGPQYATTRHNVGYMAIDELLTRASPMPARLSAHKKTNMMAAKTRIGNTKVI 64
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L P+ FMNLSG + + NF+ +P +V+ DDL+L+F ++ K GGGD GHNGL+S
Sbjct: 65 LATPRCFMNLSGGPVRSIANFFNIPP-SRVIVLFDDLELNFSEVKAKIGGGDHGHNGLRS 123
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+++ G K+Y R+ IGIGRPP VL FS E + + A + +
Sbjct: 124 VTQSLGTKDYFRVGIGIGRPPGRMEPKTFVLKPFSKKELLEIPIACADAADEVERIIT 181
>gi|313203696|ref|YP_004042353.1| peptidyL-tRNA hydrolase [Paludibacter propionicigenes WB4]
gi|312443012|gb|ADQ79368.1| peptidyl-tRNA hydrolase [Paludibacter propionicigenes WB4]
Length = 187
Score = 203 bits (518), Expect = 8e-51, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 94/185 (50%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G+EY + RHNIGF +D + ++ E +L G IL+KP
Sbjct: 3 YLIVGLGNIGNEYQDTRHNIGFTILDAFAKASNVFFTENRY-GSTCEVKLKGRTLILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG +L M K+ +EN LV+ DD+ L FGTLRLK G DAGHNGLK+I E
Sbjct: 62 STFMNLSGNALRYWMQKEKIA-IENVLVVVDDIALPFGTLRLKPQGSDAGHNGLKNIQEI 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G NY RLR G+G + +VLG ++ + L + +
Sbjct: 121 LGHNNYPRLRFGVGNDFAKGRQVEYVLGKWTKEQSEALPERAERCIEIIQSFCLAGMQLT 180
Query: 181 LNHIV 185
+
Sbjct: 181 MTQFN 185
>gi|270283891|ref|ZP_05965161.2| aminoacyl-tRNA hydrolase [Bifidobacterium gallicum DSM 20093]
gi|270277643|gb|EFA23497.1| aminoacyl-tRNA hydrolase [Bifidobacterium gallicum DSM 20093]
Length = 205
Score = 203 bits (518), Expect = 8e-51, Method: Composition-based stats.
Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 10/194 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD----GLRTI 57
+++ GLGN G Y RHN+GFM + + + K AE+ +G ++ + +
Sbjct: 12 WLIVGLGNKGVRYEGTRHNMGFMVANELAARWQVKFSNFKGLAELGQGTMNLQGQTHKFL 71
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SGQ++ + +Y + ++ +VIHDD+DL+FG ++LK+GG GHNG+KS
Sbjct: 72 LAKPLTYMNNSGQAVESIAKYYHVKP-DHIIVIHDDMDLEFGRIKLKSGGSAGGHNGIKS 130
Query: 118 ISEKC-GKNYKRLRIGIGRPPDTAHI----IRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I +Y R+R+G G I VLG F++ +R L + + A + +
Sbjct: 131 IDACLHTPDYARVRMGTGHSSRAGDAHSNSIDFVLGKFNAAQRKELPDFLADGADAAETI 190
Query: 173 AKREDVSFLNHIVS 186
+ +
Sbjct: 191 MFNGLQKAQDKYNA 204
>gi|225850828|ref|YP_002731062.1| peptidyl-tRNA hydrolase [Persephonella marina EX-H1]
gi|259535217|sp|C0QQW6|PTH_PERMH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|225646680|gb|ACO04866.1| peptidyl-tRNA hydrolase [Persephonella marina EX-H1]
Length = 189
Score = 203 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 63/181 (34%), Positives = 99/181 (54%), Gaps = 5/181 (2%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIKPQ 62
V GLGNPG +Y + RHN+GFM D + S + ++ + I + +++KPQ
Sbjct: 5 VIGLGNPGKQYEDTRHNVGFMIADVVASLLKCNKKYIERCFSHIY--VCEDHYLLIVKPQ 62
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMN SG ++ ++ Y L E LV++DDLDL GT+RL+ G GH G++SI E
Sbjct: 63 TFMNNSGVAVKNLLEDYDLKPDE-ILVVYDDLDLPLGTVRLRKKGSSGGHRGIQSIIESI 121
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
+ + R+++GIGRP ++ +VL F E+ L +I + A+ + + K L
Sbjct: 122 KTDEFPRIKVGIGRPERKEQVVDYVLSPFKKEEKILLDKVISHTAQCILNVLKYGIDKSL 181
Query: 182 N 182
N
Sbjct: 182 N 182
>gi|313683046|ref|YP_004060784.1| peptidyl-tRNA hydrolase [Sulfuricurvum kujiense DSM 16994]
gi|313155906|gb|ADR34584.1| peptidyl-tRNA hydrolase [Sulfuricurvum kujiense DSM 16994]
Length = 182
Score = 203 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 76/176 (43%), Positives = 102/176 (57%), Gaps = 8/176 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG Y RHNIGFM ID + H K F E+ + L+K
Sbjct: 1 MLIVGLGNPGSAYVSTRHNIGFMVIDELCRRHSVQNISKSSFEGELFKM----GSHFLLK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG+S+L V NFYK+ + +VIHDDLDL FG LR K GGG GHNGLKS
Sbjct: 57 PTTYMNLSGRSILAVKNFYKI---DEVIVIHDDLDLPFGALRFKNGGGHGGHNGLKSADA 113
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G +Y R+R+GIG+P + + +VL FS+ E+ L I A ++ +L ++
Sbjct: 114 AIGADYTRVRMGIGKPEHKSQVADYVLHPFSAGEQEQLPQWIGRAADAVEMLFTQQ 169
>gi|312958843|ref|ZP_07773362.1| Peptidyl-tRNA hydrolase [Pseudomonas fluorescens WH6]
gi|311286613|gb|EFQ65175.1| Peptidyl-tRNA hydrolase [Pseudomonas fluorescens WH6]
Length = 194
Score = 203 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN G + ++RI A +K+ G L+
Sbjct: 5 KLIVGLGNPGAEYEQTRHNAGALFVERIAHAQGVNLAADRKYFGLTGRFSHQGQDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ + F+++ E LV HD+LDL G +LK GGG GHNGL+ I
Sbjct: 65 PTTYMNRSGQAVAALAGFFRIKP-EEILVAHDELDLPPGVAKLKLGGGHGGHNGLRDIIA 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N+ RLR+GIG P + + VLG E+ L ID LP + E
Sbjct: 124 QLGNQNNFYRLRLGIGHPGVASMVSNFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWN 183
Query: 179 SFLNHIVSVR 188
+ ++ S +
Sbjct: 184 RAMKNLHSQK 193
>gi|167972398|ref|ZP_02554675.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|167974939|ref|ZP_02557216.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|167975180|ref|ZP_02557457.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|167989087|ref|ZP_02570758.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|195867491|ref|ZP_03079495.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|198273275|ref|ZP_03205811.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 4 str. ATCC
27816]
gi|225550448|ref|ZP_03771397.1| aminoacyl-tRNA hydrolase [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
gi|225551588|ref|ZP_03772534.1| aminoacyl-tRNA hydrolase [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|184209455|gb|EDU06498.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|188018612|gb|EDU56652.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|188997683|gb|EDU66780.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|195660092|gb|EDX53472.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|195660967|gb|EDX54220.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|198249795|gb|EDY74575.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 4 str. ATCC
27816]
gi|225379403|gb|EEH01768.1| aminoacyl-tRNA hydrolase [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|225379602|gb|EEH01964.1| aminoacyl-tRNA hydrolase [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
Length = 186
Score = 203 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG Y + RHN GFM ++ I + KF+ ++ + +P
Sbjct: 4 YLIVGLGNPGSNYAKTRHNAGFMVVNEICNKLNLFLDNSKFNGMFAKTIYNNCVVFFCQP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+ + +++ FY +P ++N +VI+DD+D G ++L+ G G NG+K+I
Sbjct: 64 TTYMNLSGEFVSKMLKFYDIP-IKNLIVIYDDVDTKLGVIKLRKKGSSGGQNGIKNIINL 122
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ KR+R+GIG+ P A + ++VL NF E + P I A + +
Sbjct: 123 LKTEEIKRIRVGIGKDPH-AKLDQYVLSNFKIDELVIIKPAIIKGALAALEAIGEDFDKV 181
Query: 181 LNHIV 185
+N
Sbjct: 182 MNKFN 186
>gi|118579183|ref|YP_900433.1| peptidyl-tRNA hydrolase [Pelobacter propionicus DSM 2379]
gi|166229431|sp|A1AM05|PTH_PELPD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118501893|gb|ABK98375.1| peptidyl-tRNA hydrolase [Pelobacter propionicus DSM 2379]
Length = 193
Score = 203 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 82/187 (43%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG Y RHN GF+ +DR+ +K F E R IL+K
Sbjct: 3 MHIIAGLGNPGSHYQWTRHNAGFLFLDRLAHLENVSITRKSFSGLAGEWSRANCRHILLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+S+++ + FYKLP L +V+HDDLDL FGT+RLK GGG GHNGL+SI E
Sbjct: 63 PQTFMNLSGRSVMQALQFYKLP-LSQAIVVHDDLDLPFGTVRLKQGGGHGGHNGLRSIME 121
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ GK ++ RLR+GIGRP + +VLG+ + L I+D L +L +
Sbjct: 122 QLGKGDFIRLRVGIGRPLH-GDTVNYVLGSMPPEQMELLPRILDGGLEMLEMLLDQGLPK 180
Query: 180 FLNHIVS 186
++ +
Sbjct: 181 AMSLFNN 187
>gi|313206339|ref|YP_004045516.1| peptidyl-tRNA hydrolase [Riemerella anatipestifer DSM 15868]
gi|312445655|gb|ADQ82010.1| peptidyl-tRNA hydrolase [Riemerella anatipestifer DSM 15868]
gi|315023205|gb|EFT36216.1| peptidyl-tRNA hydrolase [Riemerella anatipestifer RA-YM]
gi|325336217|gb|ADZ12491.1| Peptidyl-tRNA hydrolase [Riemerella anatipestifer RA-GD]
Length = 187
Score = 203 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 69/181 (38%), Positives = 100/181 (55%), Gaps = 3/181 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHN+GF +++I P F ++EG+ G + IL+KP
Sbjct: 3 YLIVGLGNKGDEYTETRHNVGFKVVEKIAEGIEAPFKTANF-GWVAEGKYKGRKVILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ + +P LEN LVI DDL L FGTLR+K G DAGHNGLK+I E
Sbjct: 62 DTYMNLSGNAVKFWLKKENIP-LENLLVITDDLALPFGTLRMKMKGSDAGHNGLKNIQEL 120
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+NY RLR GI + +VLG ++ E+ L ++ ++ +
Sbjct: 121 LQTQNYPRLRFGISANFSEGKQVDYVLGKWTEEEQSKLPERLEQFTKASLAFVFAGIQNA 180
Query: 181 L 181
+
Sbjct: 181 M 181
>gi|262197680|ref|YP_003268889.1| peptidyl-tRNA hydrolase [Haliangium ochraceum DSM 14365]
gi|262081027|gb|ACY16996.1| peptidyl-tRNA hydrolase [Haliangium ochraceum DSM 14365]
Length = 217
Score = 203 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 66/206 (32%), Positives = 111/206 (53%), Gaps = 21/206 (10%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG----LRT 56
M+++ GLGNPG +Y RHNIGF ID + + +++ KF E+ G ++ +
Sbjct: 1 MWLLVGLGNPGRKYERTRHNIGFRAIDELARRNDMGSFRSKFGGEVLSGMINARGRRHKA 60
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L+KP FMNLSG ++ + F+ + + LV+HD+LD+DFG L+LK GGG GHNGL+
Sbjct: 61 VLLKPMEFMNLSGYAVQRAVQFHDIEP-SSILVLHDELDIDFGRLKLKAGGGHGGHNGLR 119
Query: 117 SISEKCGKN-YKRLRIGIGRPPDTA---------------HIIRHVLGNFSSPERYFLLP 160
S+ E+ G N + R+R+G+G+P + ++L +F S +
Sbjct: 120 SMIEQLGSNAFLRVRMGVGKPGPQDSGQAGAPANAGSRDRRVAGYLLSDFPSEREPEVDD 179
Query: 161 IIDNIARSLPLLAKREDVSFLNHIVS 186
++ A + + R + +N + S
Sbjct: 180 LVRAAADATETILDRGIRAAMNEVHS 205
>gi|313678898|ref|YP_004056638.1| aminoacyl-tRNA hydrolase [Mycoplasma bovis PG45]
gi|312950211|gb|ADR24806.1| aminoacyl-tRNA hydrolase [Mycoplasma bovis PG45]
Length = 188
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG+EY RHN GF+ ID+I K+KF+ E + IL +
Sbjct: 1 MKLIVGLGNPGNEYRFTRHNAGFLAIDKICEKLNISLNKEKFNGEF----VISDGFILAR 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG + + NFYK+ + + +VI+DDL G +K GG AGH G++S+
Sbjct: 57 PLTYMNKSGDFIYSIANFYKI-DSSDIIVIYDDLSFSVGQAAIKIGGSSAGHKGIESLMS 115
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K ++KR+R+GIG + I +VL FS E + +++ +A + L +
Sbjct: 116 KFKTNDFKRIRVGIGA-SNNLSIKDYVLSLFSKEEMLIIEEVLEKVADAAISLVYNDINY 174
Query: 180 FLNHIVSVRK 189
+ + K
Sbjct: 175 VTSKFNTDNK 184
>gi|168362256|ref|ZP_02695435.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|209554113|ref|YP_002284497.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|226709071|sp|B5ZAQ7|PTH_UREU1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|171903466|gb|EDT49755.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|209541614|gb|ACI59843.1| peptidyl-tRNA hydrolase [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
Length = 186
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG Y + RHN GFM I+ I + KF+ ++ + +P
Sbjct: 4 YLIVGLGNPGSNYAKTRHNAGFMVINEICNKLNLFLDNSKFNGMFAKTIYNNCVVFFCQP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+ + +++ FY +P ++N +VI+DD+D G ++L+ G G NG+K+I
Sbjct: 64 TTYMNLSGEFVSKMLKFYDIP-IKNLIVIYDDVDTKLGVIKLRKKGSSGGQNGIKNIINL 122
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ KR+R+GIG+ P A + ++VL NF E + P I A + +
Sbjct: 123 LKTEEIKRIRVGIGKDPH-AKLDQYVLSNFKIDELVIIKPAIIKGALAALEAIGEDFDKV 181
Query: 181 LNHIV 185
+N
Sbjct: 182 MNKFN 186
>gi|126662579|ref|ZP_01733578.1| peptidyl-tRNA hydrolase [Flavobacteria bacterium BAL38]
gi|126625958|gb|EAZ96647.1| peptidyl-tRNA hydrolase [Flavobacteria bacterium BAL38]
Length = 206
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 65/185 (35%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G EY RHNIGF +D I + K E++E ++ G +L+KP
Sbjct: 22 FLIVGLGNIGSEYANTRHNIGFKILDYIANQEGISFQTVKL-GEVAELKIKGRTLLLLKP 80
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + + EN LVI DDL+L FGT+R+KT G D GHNGLK+I
Sbjct: 81 NTYMNLSGKAVKYWLEKENIEK-ENMLVITDDLNLAFGTIRIKTKGSDGGHNGLKNIQLL 139
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y R R GI + +VLG + + E+ L ++ + + A +
Sbjct: 140 LNSTEYPRFRFGISDAFKKGQQVNYVLGEWDAEEKEKLKERLEISSEIVKSFALAGLNNT 199
Query: 181 LNHIV 185
+N
Sbjct: 200 MNTYN 204
>gi|15604455|ref|NP_220973.1| peptidyl-tRNA hydrolase [Rickettsia prowazekii str. Madrid E]
gi|6647700|sp|Q9ZCV4|PTH_RICPR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|3861149|emb|CAA15049.1| PEPTIDYL-TRNA HYDROLASE (pth) [Rickettsia prowazekii]
Length = 185
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 90/186 (48%), Positives = 119/186 (63%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHNIGF+ I+RI S H + KKKF+ EI+E +D + I I
Sbjct: 1 MILVIGLGNPGTEYQYTRHNIGFIAIERIASKYHLSFSIKKKFNCEIAEAVIDRQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + E VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVILVKTYYNIK-YEKVFVIHDDIDLEIGRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y R+RIGIGRP + + +VL NFS E + IDNIA + L+ + +
Sbjct: 120 VVIGNHYNRIRIGIGRPKNNHDVADYVLNNFSESEYKIAMQSIDNIANNFGLILEHKLAE 179
Query: 180 FLNHIV 185
F N IV
Sbjct: 180 FTNKIV 185
>gi|194336257|ref|YP_002018051.1| Aminoacyl-tRNA hydrolase [Pelodictyon phaeoclathratiforme BU-1]
gi|238693418|sp|B4SGM1|PTH_PELPB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|194308734|gb|ACF43434.1| Aminoacyl-tRNA hydrolase [Pelodictyon phaeoclathratiforme BU-1]
Length = 190
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 96/187 (51%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP Y RHNIGF +++I + K K + ++ G + I+IK
Sbjct: 1 MKLIVGLGNPESRYIGTRHNIGFSAVEKIAASFGANFSKGKGKSLEAKITHRGEQVIIIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG +++ MNFYK+ + L+I DDL+L GT+RL+ G G NGLK I E
Sbjct: 61 PMTYMNLSGHAVVAAMNFYKIVR-NDILIICDDLNLPSGTIRLRAKGSAGGQNGLKHIIE 119
Query: 121 KCG-KNYKRLRIGIGRPPDT-AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G + + RLRIGI + VLG FS E+ + I+ + +
Sbjct: 120 SLGSEEFARLRIGIRVDETSLTSFSSFVLGKFSENEKVVMEKILPITSDAALDFTINGIE 179
Query: 179 SFLNHIV 185
+N+
Sbjct: 180 HAMNNYN 186
>gi|326383811|ref|ZP_08205496.1| peptidyl-tRNA hydrolase [Gordonia neofelifaecis NRRL B-59395]
gi|326197575|gb|EGD54764.1| peptidyl-tRNA hydrolase [Gordonia neofelifaecis NRRL B-59395]
Length = 188
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 64/188 (34%), Positives = 108/188 (57%), Gaps = 3/188 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG Y + RHN+G M D + S H K+ A + ++ G ++
Sbjct: 1 MKLIVGLGNPGPAYEKTRHNVGAMVADGLVSSHGEKFSVHKRSGALTATVRIGGEPVLVA 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
K +T+MN++G+ + + ++Y + ++ +V+HD+LD+DFG +RLK GGG+ GHNGL+SIS
Sbjct: 61 KSRTYMNVTGRQIGPLASYYSVAP-QDLIVLHDELDIDFGAVRLKLGGGEGGHNGLRSIS 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G ++Y R+R+GIGRPP VL F + ++ N + LL ++
Sbjct: 120 QTIGTRDYLRVRLGIGRPPGRQDPADFVLKPFPGSAAAEVELLVANGVDAAELLVEQGLE 179
Query: 179 SFLNHIVS 186
+ N + +
Sbjct: 180 AAQNTVHA 187
>gi|253997199|ref|YP_003049263.1| peptidyl-tRNA hydrolase [Methylotenera mobilis JLW8]
gi|253983878|gb|ACT48736.1| peptidyl-tRNA hydrolase [Methylotenera mobilis JLW8]
Length = 191
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 67/188 (35%), Positives = 103/188 (54%), Gaps = 4/188 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG +Y RHN GF ID++ + + A KF + + LIKP
Sbjct: 6 LFVGLGNPGEKYAATRHNAGFWWIDQVAAATNSKLAVDAKFFGFAGKLS-PTADSWLIKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ + N+YK+ E LVIHD+LDL G++++K GGG GHNGL+ I
Sbjct: 65 TTFMNASGKAVAALANYYKISPAE-ILVIHDELDLPAGSIKMKFGGGHGGHNGLRDIHSA 123
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLR+GIG P ++ VL + E++ + I + + + L+ K E S
Sbjct: 124 LGTADYWRLRVGIGHPGSKNEVVNFVLKAPTKDEQHVIDDSIYDSCKLVDLMLKGEFDSA 183
Query: 181 LNHIVSVR 188
+ + + +
Sbjct: 184 MLKLHTKK 191
>gi|229495524|ref|ZP_04389257.1| peptidyl-tRNA hydrolase [Porphyromonas endodontalis ATCC 35406]
gi|229317507|gb|EEN83407.1| peptidyl-tRNA hydrolase [Porphyromonas endodontalis ATCC 35406]
Length = 252
Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 3/182 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHN+GF + I ++++ ++ G++ +L+KP
Sbjct: 48 YLIVGLGNIGEEYWGTRHNVGFRMANAIAEEIGATFTEQRY-GAVARGRIKNAELVLLKP 106
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + LP E L++ DDL LDFGTLRLK+ G DAGHNGLK+I++
Sbjct: 107 STYMNLSGEAVRYWLQKENLPT-EQLLILVDDLALDFGTLRLKSKGSDAGHNGLKNIAQL 165
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y RLR G+G I VLG+F+ E ++ + +
Sbjct: 166 LGTAEYARLRFGLGSRFSKGRQIEFVLGHFTPEEEQYMPLLTKEAVAIVRDFCLSGVDRA 225
Query: 181 LN 182
+N
Sbjct: 226 MN 227
>gi|315608436|ref|ZP_07883424.1| aminoacyl-tRNA hydrolase [Prevotella buccae ATCC 33574]
gi|315249896|gb|EFU29897.1| aminoacyl-tRNA hydrolase [Prevotella buccae ATCC 33574]
Length = 190
Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 64/188 (34%), Positives = 94/188 (50%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GFM +D ++ K + ++E + G + L+KP
Sbjct: 4 YLICGLGNPGDEYAGTRHNTGFMVLDAFAKASNI-CFEDKRYGFVAETSIKGRKVFLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + + LV+ DD+ L G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENI-DESRLLVVSDDVALPLGAFRLKGSGSNGGHNGLGHIQQM 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G +Y RLR+G+G I VLG++S E+ L P ID + +
Sbjct: 122 IGPDYARLRMGVGNDYPRGGQIDWVLGHYSEDEKKELQPAIDTAVDIIKSFVLAGIDITM 181
Query: 182 NHIVSVRK 189
N + K
Sbjct: 182 NQYNKLGK 189
>gi|326772329|ref|ZP_08231614.1| aminoacyl-tRNA hydrolase [Actinomyces viscosus C505]
gi|326638462|gb|EGE39363.1| aminoacyl-tRNA hydrolase [Actinomyces viscosus C505]
Length = 200
Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 9/196 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLD-------G 53
++V GLGNPG Y NRHN+G+M +D + + KK A ++EG+L G
Sbjct: 5 WLVVGLGNPGTRYARNRHNVGYMVLDVLAECTGSRFSQHKKARARVAEGRLGMMSGGAPG 64
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
R IL +P MNLSG + ++++Y + LVIHD+LDL LRLK GGG+ GHN
Sbjct: 65 PRVILAEPSVLMNLSGGPVAGLVSYYGIDPASRLLVIHDELDLPAHELRLKRGGGEGGHN 124
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GL+SIS+ K+Y RLR+GIGRPP VL +F ER L ++ A ++ +
Sbjct: 125 GLRSISKSVSTKDYARLRVGIGRPPGRQDPSDFVLSDFPGRERADLGVTLEQAADAVEQV 184
Query: 173 AKREDVSFLNHIVSVR 188
+ + R
Sbjct: 185 VTVGFDDAQQRLHAPR 200
>gi|327403711|ref|YP_004344549.1| peptidyl-tRNA hydrolase [Fluviicola taffensis DSM 16823]
gi|327319219|gb|AEA43711.1| peptidyl-tRNA hydrolase [Fluviicola taffensis DSM 16823]
Length = 187
Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 67/185 (36%), Positives = 95/185 (51%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y E RHNIGF ++ + +K AE++E + G IL+KP
Sbjct: 3 YLFVGLGNPGSKYEETRHNIGFKVLEALAKELGGTFTLQK-TAEVAEVKFKGRTLILVKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + K+ EN +V+ DDL L FG LR+K G D GHNGLK I
Sbjct: 62 TTYMNLSGKAVNYYLQQEKILK-ENMVVVTDDLALPFGKLRMKGKGSDGGHNGLKDIQAT 120
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y RLR G+G + +VLG +S+ ER L I+ L A
Sbjct: 121 LNSVEYCRLRFGVGSDFHKGQQVDYVLGEWSAEERETLNERINIATEFLKGFATIGIQLT 180
Query: 181 LNHIV 185
+ +
Sbjct: 181 MTNWN 185
>gi|304415230|ref|ZP_07395936.1| peptidyl-tRNA hydrolase [Candidatus Regiella insecticola LSR1]
gi|304282919|gb|EFL91376.1| peptidyl-tRNA hydrolase [Candidatus Regiella insecticola LSR1]
Length = 197
Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 63/191 (32%), Positives = 95/191 (49%), Gaps = 5/191 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y E RHN G ++ + + K K ++ ++ L+
Sbjct: 5 KLIVGLANPGSQYAETRHNAGAWFVENLAKRYNQSLQKNSKLLGYTAQIKIVNHEIRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG ++ + NFY E LV+HD+LD G + K GGG+ GHNGLK +
Sbjct: 65 PTTFMNLSGNAVKAMTNFYHFL-AEEILVVHDELDFLPGVAKFKFGGGNGGHNGLKRYPK 123
Query: 121 K---CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
K N+ RLRIGIG P + + ++ VL E+ + ID R L+ K
Sbjct: 124 KKLDNNANFHRLRIGIGHPGERSKVMDFVLSPPPLSEKKRIDDAIDESLRCTELIFKENM 183
Query: 178 VSFLNHIVSVR 188
+ + ++ S R
Sbjct: 184 ATAIQNLHSFR 194
>gi|255530496|ref|YP_003090868.1| peptidyl-tRNA hydrolase [Pedobacter heparinus DSM 2366]
gi|255343480|gb|ACU02806.1| peptidyl-tRNA hydrolase [Pedobacter heparinus DSM 2366]
Length = 186
Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGFM D + + A +E G + +IKP
Sbjct: 3 YLIVGLGNIGPEYACTRHNIGFMIADELVKQQEGTFTNTRL-AYYAEIGFKGRKLHVIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M ++P LEN LVI DDL L G LRLK G AGHNGLKSI
Sbjct: 62 TTYMNLSGKAVNYYMQELRIP-LENVLVIVDDLALPLGKLRLKLQGSSAGHNGLKSIEGL 120
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
C G+ Y RLR GI + +VL F E L +ID +
Sbjct: 121 CGGQGYPRLRFGISDNFPKGRQVDYVLAPFDKDELPELPGLIDKSTELIKSFVTVGPAKT 180
Query: 181 LNHIVS 186
+
Sbjct: 181 MTAFNQ 186
>gi|283853057|ref|ZP_06370313.1| peptidyl-tRNA hydrolase [Desulfovibrio sp. FW1012B]
gi|283571524|gb|EFC19528.1| peptidyl-tRNA hydrolase [Desulfovibrio sp. FW1012B]
Length = 206
Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 16/196 (8%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTIL---- 58
++ GLGNPG Y RHN GFM +D + K A + ++ L
Sbjct: 6 LIVGLGNPGPRYAATRHNYGFMAVDAVIDRARELGGAPKA-ALSARKDMEAQAVSLPVLP 64
Query: 59 ---------IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGD 109
+KP TFMNLSG+++ M+FYKL + LV+HD+LDL G +R K GGG+
Sbjct: 65 GGAFAQFLCLKPLTFMNLSGRAVRAAMDFYKLGPT-DVLVLHDELDLPLGRMRAKRGGGN 123
Query: 110 AGHNGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
AGHNGLKS++++ G ++ RLR+GIGRP + +VL F + E + ++
Sbjct: 124 AGHNGLKSLTQELGSPDFVRLRLGIGRPEPGRDVAGYVLEPFRAEEIPVVRRVLPAAVDG 183
Query: 169 LPLLAKREDVSFLNHI 184
+ + + + +
Sbjct: 184 VMTYFEDGLDAAMRRV 199
>gi|116328182|ref|YP_797902.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330906|ref|YP_800624.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|122281341|sp|Q04TA4|PTH_LEPBJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|122284027|sp|Q051M6|PTH_LEPBL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116120926|gb|ABJ78969.1| Peptidyl -tRNA hydrolase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116124595|gb|ABJ75866.1| Peptidyl -tRNA hydrolase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 189
Score = 202 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 63/181 (34%), Positives = 103/181 (56%), Gaps = 3/181 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ G+GNPG +Y NRHNIGF+ +D + + ++ ++ +G+ +KP
Sbjct: 6 LLLVGIGNPGPKYAYNRHNIGFVILDSLLNSSSAS-YQTNSKYSLARTDEEGVTIFYLKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMNLSG+++ E+ + + EN LVIHD++D +FG L+LK GGG AGHNGL++I EK
Sbjct: 65 LEFMNLSGKAVAEIAKKNGI-SPENILVIHDEIDFEFGKLKLKEGGGHAGHNGLRNIVEK 123
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G N + RLR G+G+P + + +VL NF E+ + ++ + + + F
Sbjct: 124 LGTNTFFRLRFGVGKPSTASEVSDYVLSNFFPEEKEKIPELVQVSLQKIYDWVRERKNEF 183
Query: 181 L 181
Sbjct: 184 Q 184
>gi|182414102|ref|YP_001819168.1| aminoacyl-tRNA hydrolase [Opitutus terrae PB90-1]
gi|177841316|gb|ACB75568.1| Aminoacyl-tRNA hydrolase [Opitutus terrae PB90-1]
Length = 194
Score = 202 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 104/187 (55%), Gaps = 6/187 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK--FHAEISEGQLDGL-RTILI 59
+VAGLGNPG EY RHN+G++ +D + + AWK + F A ++ G L+
Sbjct: 5 LVAGLGNPGREYASTRHNLGWIVLDALAAKLG-LAWKPQPQFQAAVTRWNRPGHGACWLV 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG ++ + F+KLP +E+ LV++DDL++D G +++ G GHNGL S+
Sbjct: 64 KPLTFMNDSGVAVGALARFHKLP-IESVLVLYDDLNIDLGLVKVSVTGSAGGHNGLASVI 122
Query: 120 EKCGKNYKRLRIGIG-RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
E G + R R+GIG + P + VLG F+ ++ + + + L LL R
Sbjct: 123 EHFGDGFVRYRLGIGPKEPPQMDLKDFVLGKFTPDQQSLVTQNLPSYLSGLDLLLSRGVD 182
Query: 179 SFLNHIV 185
+ +N +
Sbjct: 183 AAMNQLN 189
>gi|229588276|ref|YP_002870395.1| peptidyl-tRNA hydrolase [Pseudomonas fluorescens SBW25]
gi|259535229|sp|C3KCR9|PTH_PSEFS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|229360142|emb|CAY46999.1| peptidyl-tRNA hydrolase [Pseudomonas fluorescens SBW25]
Length = 194
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY + RHN G + ++RI +K+ G L+
Sbjct: 5 KLIVGLGNPGAEYEQTRHNAGALFVERIAHAQGINLVADRKYFGLTGRFSHQGQDVRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQ++ + F+++ E LV HD+LDL G +LK GGG GHNGL+ I
Sbjct: 65 PTTYMNRSGQAVAALAGFFRIKP-EEILVAHDELDLPPGVAKLKLGGGHGGHNGLRDIIA 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N+ RLR+GIG P + + VLG E+ L ID + LP + E
Sbjct: 124 QLGNQNNFYRLRLGIGHPGVASMVSNFVLGRAPRAEQEKLDASIDFVLGVLPDIFAGEWN 183
Query: 179 SFLNHIVSVR 188
+ ++ S +
Sbjct: 184 RAMKNLHSQK 193
>gi|313835377|gb|EFS73091.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL037PA2]
gi|314929234|gb|EFS93065.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL044PA1]
gi|314972373|gb|EFT16470.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL037PA3]
Length = 200
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDG------- 53
++V GLGNPG Y RHN+G I + + + AE+ +L
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVITELCRRVGENLSPARGQRAELVRTRLSSAGLGIPA 64
Query: 54 ---LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
L++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LR+K GGGD
Sbjct: 65 ADAQTVTLMRSRTYMNESGIAVRKVADFSGITP-DHLIVVHDEIDLDPGRLRIKKGGGDN 123
Query: 111 GHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
GHNGLKSI ++ R+R+G+GRPP VL + +R + + A ++
Sbjct: 124 GHNGLKSIRVHIRTGDFIRVRVGVGRPPGRQDPADWVLARVPARQRADMDARVALAADAV 183
Query: 170 PLLAKREDVSFLNHIVS 186
++ + + N S
Sbjct: 184 EMIITQGLAATQNRFNS 200
>gi|226226623|ref|YP_002760729.1| peptidyl-tRNA hydrolase [Gemmatimonas aurantiaca T-27]
gi|259535191|sp|C1A7P9|PTH_GEMAT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226089814|dbj|BAH38259.1| peptidyl-tRNA hydrolase [Gemmatimonas aurantiaca T-27]
Length = 190
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHN+G+ ID + F W+K A + G + + L+K
Sbjct: 1 MKVIVGLGNPGREYENTRHNVGWWLIDTLKERWHFEPWRKDGDAVSTTGLVGTKKVKLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG L + ++ +V+ D++ + G RL+ G GHNGLKSI
Sbjct: 61 PQTYMNLSGSVLRPYLKREGWTAAQDLMVLVDEVAVPVGEYRLRAAGSPGGHNGLKSIEA 120
Query: 121 KC-GKNYKRLRIGIGRPPDT----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
Y RLR+GI +P D + VL ER + I + ++ L
Sbjct: 121 HLKSPTYPRLRVGI-KPVDERRQIGDLADFVLHTMPRDERALVDDITPRMIDAIELWIAE 179
Query: 176 EDVSFLNHI 184
++ +
Sbjct: 180 GTEKAVSSM 188
>gi|212696151|ref|ZP_03304279.1| hypothetical protein ANHYDRO_00687 [Anaerococcus hydrogenalis DSM
7454]
gi|212676780|gb|EEB36387.1| hypothetical protein ANHYDRO_00687 [Anaerococcus hydrogenalis DSM
7454]
Length = 194
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 58/189 (30%), Positives = 108/189 (57%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+ + GLGNPG +Y RHN GF+ ID + + K KF + I +G + G + +L+K
Sbjct: 1 MYYIVGLGNPGMQYENTRHNAGFISIDYLARKYNIDVRKIKFKSLIGQGVISGHKVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ E+ N+Y + + +VI+DD+D+DFG++R++ G HNG+KSI
Sbjct: 61 PQTYMNNSGEAIREIFNYYDF-DHDKLIVIYDDIDIDFGSIRIRKKGSAGTHNGMKSIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
++ R+++ +G+ P+ + VL FS E + + ++ ++ ++ +
Sbjct: 120 NLQFDDFPRIKVAVGKKPEYMDLANFVLSGFSKKEAKIIEEEVMLLSDAIEMILEEGIDK 179
Query: 180 FLNHIVSVR 188
++ + R
Sbjct: 180 TMSIYNAKR 188
>gi|224282805|ref|ZP_03646127.1| peptidyl-tRNA hydrolase [Bifidobacterium bifidum NCIMB 41171]
gi|310287259|ref|YP_003938517.1| Peptidyl-tRNA hydrolase [Bifidobacterium bifidum S17]
gi|311064108|ref|YP_003970833.1| peptidyl-tRNA hydrolase Pth [Bifidobacterium bifidum PRL2010]
gi|313139964|ref|ZP_07802157.1| peptidyl-tRNA hydrolase [Bifidobacterium bifidum NCIMB 41171]
gi|309251195|gb|ADO52943.1| Peptidyl-tRNA hydrolase [Bifidobacterium bifidum S17]
gi|310866427|gb|ADP35796.1| Pth Peptidyl-tRNA hydrolase [Bifidobacterium bifidum PRL2010]
gi|313132474|gb|EFR50091.1| peptidyl-tRNA hydrolase [Bifidobacterium bifidum NCIMB 41171]
Length = 199
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 57/181 (31%), Positives = 96/181 (53%), Gaps = 10/181 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD----GLRTI 57
+++ GLGNPG +Y RHN+GFM D + K A + +G ++ ++
Sbjct: 6 WLIVGLGNPGKKYEGTRHNMGFMTADILAERWSVAFSDHKGLAMLGKGAMNLQGRNVKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SG ++ + +Y++ ++ +VIHDD+DL+FG +++K GG GHNG+KS
Sbjct: 66 LAKPLTYMNDSGNAVASISAYYQI-QPDHVVVIHDDMDLEFGRIKVKAGGSAGGHNGIKS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDT----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I + Y R+R+G+G + + VLG F +R L + + A + +
Sbjct: 125 IDKALSTPKYARVRMGVGHAQRGAHAHDNTVNWVLGGFGPDQRKQLPEFLADGADAAETI 184
Query: 173 A 173
Sbjct: 185 I 185
>gi|325846470|ref|ZP_08169385.1| aminoacyl-tRNA hydrolase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481228|gb|EGC84269.1| aminoacyl-tRNA hydrolase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 194
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 58/189 (30%), Positives = 108/189 (57%), Gaps = 2/189 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+ + GLGNPG +Y RHN GF+ ID + + K KF + I +G + G + +L+K
Sbjct: 1 MYYIVGLGNPGMQYENTRHNAGFISIDYLARKYDIDVRKIKFKSLIGQGVISGHKVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+++ E+ N++ + + +VI+DD+D+DFG++R++ G HNG+KSI
Sbjct: 61 PQTYMNNSGEAIREIFNYFDF-DHDKLIVIYDDIDIDFGSIRIRKKGSAGTHNGMKSIIY 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
++ R+++ +G+ P+ + VL FS E + + ++ ++ ++ +
Sbjct: 120 NLQFDDFPRIKVAVGKKPEYMDLANFVLSGFSKKEAKIIEEEVMLLSDAIEMILEEGIDK 179
Query: 180 FLNHIVSVR 188
++ S R
Sbjct: 180 TMSIYNSKR 188
>gi|78357171|ref|YP_388620.1| peptidyl-tRNA hydrolase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|119390935|sp|Q30ZH1|PTH_DESDG RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78219576|gb|ABB38925.1| peptidyl-tRNA hydrolase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 201
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 71/194 (36%), Positives = 106/194 (54%), Gaps = 12/194 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRI---------HSFHFFPAWKKKFHAEISEGQLDG 53
++ GLGNPG EY RHN+GFM D + H+ KKK+ G
Sbjct: 6 LIVGLGNPGKEYENTRHNLGFMLADALLDEVRRTAPHAVTSLGTGKKKYDLWKCAPLTGG 65
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
++ KP TFMN SG ++ + FY++P E LV+HD+LDL G ++ KT GG AGHN
Sbjct: 66 SSWLVAKPLTFMNRSGDAVAHICGFYRIPP-EKILVLHDELDLPLGRMKFKTAGGLAGHN 124
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GLKSI+E+ G K++ RLR+GIG+P + +VLG F E+ + ++ + +
Sbjct: 125 GLKSIAERTGSKDFHRLRLGIGKP-QSGQTTGYVLGRFGKDEQALVEKVLQAGVEGIRIF 183
Query: 173 AKREDVSFLNHIVS 186
A++ V+ I +
Sbjct: 184 AQQGAVAATQFINA 197
>gi|26553598|ref|NP_757532.1| peptidyl-tRNA hydrolase [Mycoplasma penetrans HF-2]
gi|46576820|sp|Q8EWQ8|PTH_MYCPE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|26453604|dbj|BAC43936.1| peptidyl-tRNA hydrolase [Mycoplasma penetrans HF-2]
Length = 187
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 97/186 (52%), Gaps = 5/186 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG EY + +HN+GFMCID + H KF+ + + + + KP
Sbjct: 4 YLVVGLGNPGLEYEKTKHNVGFMCIDELLKEHTLFLNNSKFNGQFVKVDQPEDQIFIAKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+ + E+ FYK+ +N LVI+DD+D D G +R+K G G NG+KSI K
Sbjct: 64 MTYMNNSGEFVYEICKFYKIHE-QNILVIYDDIDTDVGKIRVKAKGSSGGQNGIKSIISK 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDVS 179
KR+RIGIG+P ++ HVL FS+ + + I + +
Sbjct: 123 MNTEKIKRIRIGIGKPVH--NLTHHVLTKFSAEDSIKVQQAIIKAKDACNEFLNHVDFDK 180
Query: 180 FLNHIV 185
+N
Sbjct: 181 IMNKFN 186
>gi|309808561|ref|ZP_07702457.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LactinV 01V1-a]
gi|308168189|gb|EFO70311.1| aminoacyl-tRNA hydrolase [Lactobacillus iners LactinV 01V1-a]
Length = 150
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 3/152 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN GFM ID + K+KF + ++ G IL++
Sbjct: 1 MKLIVGLGNPGLKYQKTKHNTGFMAIDYYLKKNGLSFNKEKFEGFWIKTKIKGEDVILLE 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MN SG+S+ ++++F+K+ + + LVIHDD+D+ +RL+ G GHNG+KSI
Sbjct: 61 PQTYMNDSGKSVTQLVDFFKI-DAHDILVIHDDMDMPVAKIRLRKSGKSGGHNGIKSIIN 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFS 151
+ RL+IGI P ++ VL FS
Sbjct: 120 CLNDSEFNRLKIGIDHPT-KETVVSWVLTPFS 150
>gi|288926806|ref|ZP_06420715.1| aminoacyl-tRNA hydrolase [Prevotella buccae D17]
gi|288336435|gb|EFC74812.1| aminoacyl-tRNA hydrolase [Prevotella buccae D17]
Length = 190
Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 63/188 (33%), Positives = 94/188 (50%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GFM +D ++ K + ++E + G + L+KP
Sbjct: 4 YLICGLGNPGDEYAGTRHNTGFMVLDAFAKASNI-CFEDKRYGFVAETSIKGRKVFLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + + LV+ DD+ L G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENI-DESRLLVVSDDVALPLGAFRLKGSGSNGGHNGLGHIQQM 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G +Y RLR+G+G I VLG++S E+ L P +D + +
Sbjct: 122 IGSDYARLRMGVGNDYPRGGQIDWVLGHYSEDEKKELQPAVDTAVDIIKSFVLAGIDITM 181
Query: 182 NHIVSVRK 189
N + K
Sbjct: 182 NQYNKLGK 189
>gi|146298889|ref|YP_001193480.1| peptidyl-tRNA hydrolase [Flavobacterium johnsoniae UW101]
gi|146153307|gb|ABQ04161.1| peptidyl-tRNA hydrolase [Flavobacterium johnsoniae UW101]
Length = 225
Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 65/181 (35%), Positives = 95/181 (52%), Gaps = 3/181 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF +D + K ++E + G L+KP
Sbjct: 41 YLIVGLGNIGAEYVNTRHNIGFKVLDFLAKKEGLSFETVKL-GSLAEYKFKGRTFFLLKP 99
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M+ +P LEN LVI DDL+L FGT+R+K G D GHNGLK+I+
Sbjct: 100 NTYMNLSGKAVKYWMDKENIP-LENILVITDDLNLSFGTIRIKPKGSDGGHNGLKNINLV 158
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+NY R R GI I +VLG +++ E L ++ A + +
Sbjct: 159 LNTQNYTRYRFGISDQFKKGQQIDYVLGEWNAEEEAKLPERLEVSAEIIKTFGTAGLENT 218
Query: 181 L 181
+
Sbjct: 219 M 219
>gi|313674671|ref|YP_004052667.1| peptidyl-tRNA hydrolase [Marivirga tractuosa DSM 4126]
gi|312941369|gb|ADR20559.1| peptidyl-tRNA hydrolase [Marivirga tractuosa DSM 4126]
Length = 186
Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 96/186 (51%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF+ +DR+ K A +E + G + LIKP
Sbjct: 3 YLIVGLGNIGAEYEITRHNIGFLTLDRLADQQKVAFETLKL-AMKAEFKYKGRQIHLIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M K+P EN +VI DD+ L FG LRL+ G AGHNGLK+I +
Sbjct: 62 TTYMNLSGKAVNYWMQELKIPK-ENIMVITDDIALPFGKLRLRAKGSSAGHNGLKNIEDL 120
Query: 122 -CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G+NY RL+ GIG + +VL F+ E L I+D +
Sbjct: 121 TGGQNYARLKFGIGDNFHKGQQVDYVLSPFTQQEFDELPFIMDKACDMVLGFTTIGVNRT 180
Query: 181 LNHIVS 186
++
Sbjct: 181 MSEFND 186
>gi|306823176|ref|ZP_07456552.1| aminoacyl-tRNA hydrolase [Bifidobacterium dentium ATCC 27679]
gi|309801636|ref|ZP_07695757.1| aminoacyl-tRNA hydrolase [Bifidobacterium dentium JCVIHMP022]
gi|304553808|gb|EFM41719.1| aminoacyl-tRNA hydrolase [Bifidobacterium dentium ATCC 27679]
gi|308221768|gb|EFO78059.1| aminoacyl-tRNA hydrolase [Bifidobacterium dentium JCVIHMP022]
Length = 199
Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 10/193 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD----GLRTI 57
+++AGLGNPG +Y RHN+GFM D + K A + +G ++ ++
Sbjct: 6 WLIAGLGNPGSKYEGTRHNMGFMTADLLAERWSVNFSDHKGLAMLGKGVMNLSGRNVKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SG ++ + ++Y++ + +V+HDD+DLDFG +++K+GG GHNG+KS
Sbjct: 66 LAKPLTYMNDSGNAVASISSYYQIEP-NHIVVVHDDMDLDFGRIKVKSGGSAGGHNGIKS 124
Query: 118 ISEKC-GKNYKRLRIGIGRPPDT----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I Y R+R+G+G + + VLG F +R L + + A + +
Sbjct: 125 IDRSLDTPKYARVRMGVGHAQRGAHAHDNTVNWVLGGFGPDQRKQLPEFLADGADAAETI 184
Query: 173 AKREDVSFLNHIV 185
Sbjct: 185 IFDGLAKAQEQFN 197
>gi|307299264|ref|ZP_07579065.1| peptidyl-tRNA hydrolase [Thermotogales bacterium mesG1.Ag.4.2]
gi|306915060|gb|EFN45446.1| peptidyl-tRNA hydrolase [Thermotogales bacterium mesG1.Ag.4.2]
Length = 189
Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 58/187 (31%), Positives = 99/187 (52%), Gaps = 5/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFH-AEISEGQLDGLRTILI 59
MF+ GLGNPG Y RHN+GF+ ID++ +K+ + A + EG+ + +
Sbjct: 1 MFLFVGLGNPGPRYALTRHNVGFLFIDQMAKLGLRKTVQKRLYEAHLLEGE---EKVYIA 57
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG ++ +M + ++++DD+ + G +R++ G D GHNGLKS+
Sbjct: 58 KPLTFMNLSGVAVRLLMKDLNFEKKDTLVLVYDDVWIPLGRMRIRESGSDGGHNGLKSVI 117
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G +++ R+RIG+G P+ ++ +VLG FS E + +I + L +
Sbjct: 118 SEIGTQSFPRIRIGVGPLPENGDMVDYVLGKFSDDEYQKVSKVIGLAVSAAKELISGDIR 177
Query: 179 SFLNHIV 185
+
Sbjct: 178 KVMTAYN 184
>gi|325104424|ref|YP_004274078.1| peptidyl-tRNA hydrolase [Pedobacter saltans DSM 12145]
gi|324973272|gb|ADY52256.1| peptidyl-tRNA hydrolase [Pedobacter saltans DSM 12145]
Length = 215
Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 67/188 (35%), Positives = 97/188 (51%), Gaps = 3/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY +NRHNIGFM +D + + HA +E G LIKP
Sbjct: 27 YLIVGLGNIGPEYADNRHNIGFMIVDELAKQEGVKFSMSR-HAYHTEFSYKGRNIHLIKP 85
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG++L+ M K+ EN LV+ DDL + FG++++K G AGHNGLK+I +
Sbjct: 86 TTFMNLSGKALVHWMRELKVAQ-ENVLVLVDDLAIPFGSIKIKPKGSSAGHNGLKNIEQL 144
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G NY RLR G+ + +VL F E +L +ID +
Sbjct: 145 LGNSNYSRLRFGVSDNFPKGRQVDYVLSGFDRDELPYLQELIDRSIAMIKAFCTIGVELT 204
Query: 181 LNHIVSVR 188
+ + + +
Sbjct: 205 MTNFNNWK 212
>gi|331005806|ref|ZP_08329164.1| Peptidyl-tRNA hydrolase [gamma proteobacterium IMCC1989]
gi|330420387|gb|EGG94695.1| Peptidyl-tRNA hydrolase [gamma proteobacterium IMCC1989]
Length = 193
Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 64/188 (34%), Positives = 91/188 (48%), Gaps = 4/188 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG EY RHN G + + + A KF + G + L+
Sbjct: 6 KLIVGLGNPGAEYANTRHNAGADFVMELARQYDITLAADSKFFGFVGRGTIQNNDVRLLL 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ + FYK+ E LV HD+LDL RLK GGG GHNGL+ I
Sbjct: 66 PTTFMNASGKSVAAIAQFYKVEP-EAILVAHDELDLAPSVARLKIGGGHGGHNGLRDIIS 124
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G KN+ RLRIGI P + + +VL + E + I + +PL + +
Sbjct: 125 CLGNNKNFARLRIGIDHPGNAKLVSNYVLKKAAPTEYQQIEDSIYQATKVIPLALEGKWN 184
Query: 179 SFLNHIVS 186
+ + +
Sbjct: 185 EAMKTLHT 192
>gi|292572229|gb|ADE30144.1| Peptidyl-tRNA hydrolase [Rickettsia prowazekii Rp22]
Length = 185
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 90/186 (48%), Positives = 118/186 (63%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG EY RHNIGF+ I+RI S H + KKKF+ EI E +D + I I
Sbjct: 1 MILVIGLGNPGTEYQYTRHNIGFIAIERIASKYHLSFSIKKKFNCEIVEAVIDRQKIIFI 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S++ V +Y + E VIHDD+DL+ G ++ KTGGG+ GHNGLKSI
Sbjct: 61 KPTTYMNLSGKSVILVKTYYNIK-YEKVFVIHDDIDLEIGRIKFKTGGGNGGHNGLKSID 119
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y R+RIGIGRP + + +VL NFS E + IDNIA + L+ + +
Sbjct: 120 VVIGNHYNRIRIGIGRPKNNHDVADYVLNNFSESEYKIAMQSIDNIANNFGLILEHKLAE 179
Query: 180 FLNHIV 185
F N IV
Sbjct: 180 FTNKIV 185
>gi|268678854|ref|YP_003303285.1| peptidyl-tRNA hydrolase [Sulfurospirillum deleyianum DSM 6946]
gi|268616885|gb|ACZ11250.1| peptidyl-tRNA hydrolase [Sulfurospirillum deleyianum DSM 6946]
Length = 191
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 76/178 (42%), Positives = 108/178 (60%), Gaps = 9/178 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF--PAWKKKFHAEISEGQLDGLRTIL 58
M ++ GLGNP +Y NRHN+GFM ID + H K F E+ + +L
Sbjct: 1 MTLIVGLGNPDFQYKNNRHNVGFMVIDALLDDHPLAEKISKTAFKGELFKA----PSILL 56
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG+S+ V +++K E +VIHDDLDL FGTLR K GGG GHNGL+SI
Sbjct: 57 LKPNTYMNLSGESVRAVSDYFK---PEQIIVIHDDLDLPFGTLRFKIGGGHGGHNGLRSI 113
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G Y R+RIGIG+P + + ++VL +FS+ +R L ++ ++ RS+ L K +
Sbjct: 114 DAHMGSEYIRVRIGIGKPTHKSDVAKYVLSDFSACQREALPALLLHVKRSVMALLKED 171
>gi|259507031|ref|ZP_05749931.1| peptidyl-tRNA hydrolase 2 (PTH 2) [Corynebacterium efficiens
YS-314]
gi|259165309|gb|EEW49863.1| peptidyl-tRNA hydrolase 2 (PTH 2) [Corynebacterium efficiens
YS-314]
Length = 220
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 9/188 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG--LRTILI 59
++V GLGNPG +Y RHN+G+MC+D + H P ++ L + +
Sbjct: 38 WLVVGLGNPGVKYEATRHNVGYMCVDTLLGTHDAPPLTPVRGLKVLTTPLPDAADSALAV 97
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+ TFMN SGQ + + +P E +VIHD+LDL G +R+K GG + GHNGLKS++
Sbjct: 98 RSTTFMNHSGQGVAPLAQTLGIPP-ERIIVIHDELDLPAGKVRVKKGGNENGHNGLKSLT 156
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
++ G ++Y R+RIGI RPP + +VL + + P ID A ++ L+ R
Sbjct: 157 QELGTRDYLRVRIGISRPPQGMSVPDYVLEPVADQQ-----PGIDVAADAVDLIIARGLA 211
Query: 179 SFLNHIVS 186
+ N I +
Sbjct: 212 AAQNDIHA 219
>gi|25027562|ref|NP_737616.1| peptidyl-tRNA hydrolase [Corynebacterium efficiens YS-314]
gi|23492844|dbj|BAC17816.1| putative peptidyl-tRNA hydrolase [Corynebacterium efficiens YS-314]
Length = 231
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 9/188 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG--LRTILI 59
++V GLGNPG +Y RHN+G+MC+D + H P ++ L + +
Sbjct: 49 WLVVGLGNPGVKYEATRHNVGYMCVDTLLGTHDAPPLTPVRGLKVLTTPLPDAADSALAV 108
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+ TFMN SGQ + + +P E +VIHD+LDL G +R+K GG + GHNGLKS++
Sbjct: 109 RSTTFMNHSGQGVAPLAQTLGIPP-ERIIVIHDELDLPAGKVRVKKGGNENGHNGLKSLT 167
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
++ G ++Y R+RIGI RPP + +VL + + P ID A ++ L+ R
Sbjct: 168 QELGTRDYLRVRIGISRPPQGMSVPDYVLEPVADQQ-----PGIDVAADAVDLIIARGLA 222
Query: 179 SFLNHIVS 186
+ N I +
Sbjct: 223 AAQNDIHA 230
>gi|78776667|ref|YP_392982.1| peptidyl-tRNA hydrolase [Sulfurimonas denitrificans DSM 1251]
gi|119391034|sp|Q30TD4|PTH_SULDN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78497207|gb|ABB43747.1| peptidyl-tRNA hydrolase [Sulfurimonas denitrificans DSM 1251]
Length = 184
Score = 200 bits (511), Expect = 5e-50, Method: Composition-based stats.
Identities = 71/173 (41%), Positives = 94/173 (54%), Gaps = 7/173 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG Y RHNIGFM ID + F + + L+KP
Sbjct: 2 LIVGLGNPGANYERTRHNIGFMVIDELVKKQNAQKISSSFDGTLFKFSNH----FLLKPL 57
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG ++ +V FYK+ + +VIHDDLDL FGTLR K GGG GHNGL+S E
Sbjct: 58 TFMNLSGSAIRDVKQFYKI---DEVVVIHDDLDLPFGTLRFKKGGGHGGHNGLRSTDEHI 114
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
K Y R+R+GIG+P + +VL NF+ E+ L I +++ L
Sbjct: 115 SKEYIRVRMGIGKPEHKGEVASYVLSNFTKDEQAHLDEFITFTCKAIEALLTN 167
>gi|227876325|ref|ZP_03994438.1| aminoacyl-tRNA hydrolase [Mobiluncus mulieris ATCC 35243]
gi|269976099|ref|ZP_06183098.1| peptidyl-tRNA hydrolase [Mobiluncus mulieris 28-1]
gi|306817216|ref|ZP_07450963.1| aminoacyl-tRNA hydrolase [Mobiluncus mulieris ATCC 35239]
gi|227843098|gb|EEJ53294.1| aminoacyl-tRNA hydrolase [Mobiluncus mulieris ATCC 35243]
gi|269935692|gb|EEZ92227.1| peptidyl-tRNA hydrolase [Mobiluncus mulieris 28-1]
gi|304650018|gb|EFM47296.1| aminoacyl-tRNA hydrolase [Mobiluncus mulieris ATCC 35239]
Length = 207
Score = 200 bits (511), Expect = 5e-50, Method: Composition-based stats.
Identities = 64/197 (32%), Positives = 105/197 (53%), Gaps = 14/197 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS-----FHFFPAWKKKFHAEISEGQ----LD 52
++V GLGNPG EY + RHN G+M DR + + A++++ + +D
Sbjct: 8 WLVVGLGNPGIEYAQTRHNCGYMVTDRFVESVGGKYRNQSLGRGGAMAKVADIRLGYGID 67
Query: 53 GLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGH 112
+ I+ T+MN SG + +++ FY++ + + +V+HDD+DL+F +LK GG + GH
Sbjct: 68 APQVIVAHTGTYMNTSGPVVGQLLKFYQI-DTAHLVVVHDDIDLNFRCAKLKVGGSNGGH 126
Query: 113 NGLKSISEKCG-KNYKRLRIGIGRPPDT---AHIIRHVLGNFSSPERYFLLPIIDNIARS 168
NGLKSI + G K++ RLRIG+GRPP ++ VLG F E+ L D +
Sbjct: 127 NGLKSIQQTLGTKDFARLRIGVGRPPSRELGGDVVNWVLGRFPKSEKANLEEFFDRAVQC 186
Query: 169 LPLLAKREDVSFLNHIV 185
+ +A+ +
Sbjct: 187 INDVAESGLAKAQARLH 203
>gi|206896459|ref|YP_002247108.1| peptidyl-tRNA hydrolase [Coprothermobacter proteolyticus DSM 5265]
gi|226694249|sp|B5Y8L1|PTH_COPPD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|206739076|gb|ACI18154.1| peptidyl-tRNA hydrolase [Coprothermobacter proteolyticus DSM 5265]
Length = 192
Score = 200 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 64/192 (33%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQ--LDGLRTIL 58
M ++ GLGNPG EY + RHNIG+ +D + + + ++ + E + L +
Sbjct: 1 MLLIVGLGNPGIEYEKTRHNIGWWVLDLLRTKLTGLNLRLLCYSRVYELKHELKKEVDFI 60
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+ P T+MN SG+++ + + +VIHDDLDL G R++ GG AGH G+ SI
Sbjct: 61 VYPLTYMNNSGKAVKCLY-----EPRMDLVVIHDDLDLTVGKTRVRFGGSSAGHKGVSSI 115
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK-RE 176
+ G + + R+++GIGRP +I +VLG E+ L+ D IA L LL R
Sbjct: 116 IDALGTDSFWRVKVGIGRPFSKQEVINYVLGEPQKNEKEVLIRAADYIADQLCLLITDRN 175
Query: 177 DVSFLNHIVSVR 188
F +I S
Sbjct: 176 FSRFQQNINSFN 187
>gi|282853610|ref|ZP_06262947.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes J139]
gi|282583063|gb|EFB88443.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes J139]
gi|315092573|gb|EFT64549.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA4]
gi|315104559|gb|EFT76535.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL050PA2]
Length = 200
Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 13/197 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDG------- 53
++V GLGNPG Y RHN+G I + + + AE+ +L
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 54 ---LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
IL++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LRLK GGGD
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGMTP-DHLIVVHDEIDLDPGRLRLKKGGGDN 123
Query: 111 GHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
GHNGLKS+ ++ R+R+G+GRPP VL +R + + A ++
Sbjct: 124 GHNGLKSVRAHMRTGDFIRVRVGVGRPPGRQDPADWVLARVPVRQRTDMDVQVALAADAV 183
Query: 170 PLLAKREDVSFLNHIVS 186
+ K+ N S
Sbjct: 184 ETIIKQGLTVAQNRFNS 200
>gi|255536468|ref|YP_003096839.1| peptidyl-tRNA hydrolase [Flavobacteriaceae bacterium 3519-10]
gi|255342664|gb|ACU08777.1| Peptidyl-tRNA hydrolase [Flavobacteriaceae bacterium 3519-10]
Length = 187
Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 66/181 (36%), Positives = 101/181 (55%), Gaps = 3/181 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY E RHN+GF ++I P +K ++EG+ G + ++KP
Sbjct: 3 YLIVGLGNKGDEYTETRHNVGFKVAEKIAETIEAP-FKPSNFGLMAEGKYKGRKVFILKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ + +P +EN +++ DDL L FGTLR+K G DAGHNGLKSI E+
Sbjct: 62 DTYMNLSGNAVKFWLQKENIP-VENLMIVTDDLSLPFGTLRMKMKGSDAGHNGLKSIQEQ 120
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+NY RLR GI + +VLG +S E+ L I+ +++ +
Sbjct: 121 LQTQNYPRLRFGISAEFSEGKQVDYVLGKWSEDEKEKLPERIEKFSKACLSFVFAGIQNA 180
Query: 181 L 181
+
Sbjct: 181 M 181
>gi|163786663|ref|ZP_02181111.1| peptidyl-tRNA hydrolase [Flavobacteriales bacterium ALC-1]
gi|159878523|gb|EDP72579.1| peptidyl-tRNA hydrolase [Flavobacteriales bacterium ALC-1]
Length = 210
Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 67/185 (36%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G +Y RHNIGF +D + + +K +I+ ++ G IL+KP
Sbjct: 26 FLIVGLGNIGEKYANTRHNIGFKVLDYLVKTNDTSFETQKL-GDIATVKVKGRTLILLKP 84
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + K+P LEN LV+ DDL+L FG+LRLKT G D GHNGLK +K
Sbjct: 85 STYMNLSGKAIKYWLEKEKVP-LENLLVVTDDLNLPFGSLRLKTKGSDGGHNGLKDTQDK 143
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y R R GI + +VLG +S E L + + A +
Sbjct: 144 LQTTKYNRFRFGISDTFSKGRQVDYVLGEWSDDENSKLEERLKTSIELVKSFALAGVNNT 203
Query: 181 LNHIV 185
+N
Sbjct: 204 MNQFN 208
>gi|228472905|ref|ZP_04057662.1| aminoacyl-tRNA hydrolase [Capnocytophaga gingivalis ATCC 33624]
gi|228275487|gb|EEK14264.1| aminoacyl-tRNA hydrolase [Capnocytophaga gingivalis ATCC 33624]
Length = 188
Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats.
Identities = 63/186 (33%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF+ ++ + + +++ G IL+KP
Sbjct: 4 YLIVGLGNIGEEYRYTRHNIGFLAVEHLAQQKGVSFETVRL-GDVATFSHKGRTFILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + K+P +EN LVI DDL++ FG++R+K G D GHNG K+I E+
Sbjct: 63 STFMNLSGKAIKYWLEKEKIP-IENLLVIADDLNIPFGSIRIKKKGSDGGHNGFKNIQEE 121
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y RLR GI I +VLG++S E L ++ I+ ++ +
Sbjct: 122 LQTTTYARLRFGISANYAKGTQIDYVLGHWSEDEVALLPERLEKISEAILSFGLAGADTT 181
Query: 181 LNHIVS 186
+N +
Sbjct: 182 MNLYNN 187
>gi|239618099|ref|YP_002941421.1| peptidyl-tRNA hydrolase [Kosmotoga olearia TBF 19.5.1]
gi|259535202|sp|C5CFR9|PTH_KOSOT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|239506930|gb|ACR80417.1| peptidyl-tRNA hydrolase [Kosmotoga olearia TBF 19.5.1]
Length = 190
Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 99/190 (52%), Gaps = 6/190 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG-QLDGL-RTIL 58
M + GLGNPG Y RHN+GF+ +D + + + AE E +L I
Sbjct: 1 MLVFIGLGNPGPRYVLTRHNVGFLFVDELLKKFQIGS---SYRAETYEAFKLKSQSPAIA 57
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MN SG ++ +++ + L + +VI+DD+ + G LR++ G D GHNG+KSI
Sbjct: 58 VKPLTYMNNSGIAVRDLIRDFGLSQNDRLIVIYDDVWIPLGRLRIRERGSDGGHNGVKSI 117
Query: 119 SEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
G + + R+RIGIG PD ++ +VLG F+ E L ++D + + +
Sbjct: 118 ISSLGTQEFSRIRIGIGPKPDDIDMVSYVLGEFTDSELKVLWKVLDLAISAAQEMFAADF 177
Query: 178 VSFLNHIVSV 187
++ S+
Sbjct: 178 KKVMSRYNSI 187
>gi|298207390|ref|YP_003715569.1| peptidyl-tRNA hydrolase [Croceibacter atlanticus HTCC2559]
gi|83850026|gb|EAP87894.1| peptidyl-tRNA hydrolase [Croceibacter atlanticus HTCC2559]
Length = 219
Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 88/185 (47%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G +Y RHNIGF +D + K + + + G IL+KP
Sbjct: 35 FLIVGLGNIGPKYHNTRHNIGFKILDHLAEQEDLVFEPNKL-GDTATYKFKGRTFILLKP 93
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ M K+ N L+I DDL+L FGT+RLKT G D GHNGLK I +
Sbjct: 94 STFMNLSGKAVNYWMQKEKIRT-SNLLIITDDLNLPFGTIRLKTKGSDGGHNGLKDIQAQ 152
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y R R GI + +VLG +S E + +D +
Sbjct: 153 LKTVGYPRFRFGISNEFSKGRQVDYVLGEWSEEEESQMKERLDTSVELIKSFGTAGVSIT 212
Query: 181 LNHIV 185
+N
Sbjct: 213 MNTFN 217
>gi|239622195|ref|ZP_04665226.1| peptidyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|322690787|ref|YP_004220357.1| peptidyl-tRNA hydrolase [Bifidobacterium longum subsp. longum JCM
1217]
gi|239514192|gb|EEQ54059.1| peptidyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|320455643|dbj|BAJ66265.1| peptidyl-tRNA hydrolase [Bifidobacterium longum subsp. longum JCM
1217]
Length = 199
Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats.
Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 10/181 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG--QLDGLRT--I 57
+++AGLGNPG +Y + RHN+GFM D + K A + + LDG
Sbjct: 6 WLIAGLGNPGKKYEDTRHNMGFMAADVLAERWTVNFADHKGLAMLGKSVMNLDGRTVKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SG ++ + +Y++ ++ +VIHDD+DL+FG +++K GG GHNG+KS
Sbjct: 66 LAKPLTYMNDSGNAVASISAYYQIEP-DHIVVIHDDMDLEFGRIKVKAGGSAGGHNGIKS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDT----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I G Y R+R+G+G + + VLG F +R L + + A + +
Sbjct: 125 IDRSLGTPKYARVRMGVGHSKRGANAHDNTVNWVLGGFGPDQRKQLPEFLADGADAAEDI 184
Query: 173 A 173
Sbjct: 185 I 185
>gi|91217231|ref|ZP_01254192.1| peptidyl-tRNA hydrolase [Psychroflexus torquis ATCC 700755]
gi|91184574|gb|EAS70956.1| peptidyl-tRNA hydrolase [Psychroflexus torquis ATCC 700755]
Length = 207
Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 92/185 (49%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG +Y RHNIGF +D + ++ + + +E G + ILIKP
Sbjct: 23 FLIVGLGNPGPKYENTRHNIGFKILDTLAEKKEVS-FEPDRYGDKAEVSFKGRKFILIKP 81
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + + ++N +VI DDL+L+FG RLK G D GHNGLK I
Sbjct: 82 STFMNLSGKAVRYWLEKENIA-IDNLIVITDDLNLNFGIFRLKAKGSDGGHNGLKHIQSI 140
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y R R GI I +VL N+ E+ L +D A + +
Sbjct: 141 LQTTQYPRFRFGISDEFSKGKQIDYVLSNWDEEEKTQLKERLDASAELILSFGTAGIHNT 200
Query: 181 LNHIV 185
+N
Sbjct: 201 MNTFN 205
>gi|330837767|ref|YP_004412408.1| Peptidyl-tRNA hydrolase [Spirochaeta coccoides DSM 17374]
gi|329749670|gb|AEC03026.1| Peptidyl-tRNA hydrolase [Spirochaeta coccoides DSM 17374]
Length = 190
Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats.
Identities = 64/168 (38%), Positives = 91/168 (54%), Gaps = 3/168 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
V LGNPG EY RHN G+M I +W KKFH + ++ L++P
Sbjct: 7 FVVFLGNPGKEYERTRHNAGWMAASLIGDAGDPISWPKKFHGRWTTLRIGNHPVRLLQPL 66
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG+S+ E + F+ L + ++ LV+HDD++L FG + L+ GGG GHNGLKSI++
Sbjct: 67 TYMNESGRSVAEALTFFSL-SPQDILVVHDDIELPFGMVVLQQGGGLQGHNGLKSIAQAL 125
Query: 123 -GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ RLR+GIGRP + V FS E L I+ +
Sbjct: 126 SSPEFGRLRLGIGRPAH-GSVSSFVTSRFSREEEIILPLILSRSCECI 172
>gi|220904722|ref|YP_002480034.1| Aminoacyl-tRNA hydrolase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254783864|sp|B8J0S9|PTH_DESDA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|219869021|gb|ACL49356.1| Aminoacyl-tRNA hydrolase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 229
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 71/186 (38%), Positives = 96/186 (51%), Gaps = 9/186 (4%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHS---FHFF--PAWKKKFHAEISEGQLD--GLRT 56
+ GLGNPG Y RHN GF ID H KF ++ +L
Sbjct: 7 LVGLGNPGARYEGTRHNCGFALIDAFVDFGYRHGTVDEMNGGKFSCQLWRVRLPRLDGCW 66
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+ KPQTFMNLSGQ + +++++KL + +V HD+LD+ G LR K GGG+AGHNGLK
Sbjct: 67 LAAKPQTFMNLSGQCVQPLLSWHKLK-AADLVVAHDELDIPPGELRFKFGGGNAGHNGLK 125
Query: 117 SISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
SI+E G ++ RLR+GIGRPP + VLG + L I+ L A +
Sbjct: 126 SITELLGTPDFYRLRMGIGRPPHKGDVTNWVLGRPQGEDAENLDHILPLALDVLFAFADK 185
Query: 176 EDVSFL 181
S +
Sbjct: 186 GLDSAV 191
>gi|50842020|ref|YP_055247.1| peptidyl-tRNA hydrolase [Propionibacterium acnes KPA171202]
gi|289424236|ref|ZP_06426019.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes SK187]
gi|289428385|ref|ZP_06430071.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes J165]
gi|295130102|ref|YP_003580765.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes SK137]
gi|68052928|sp|Q6AAC7|PTH_PROAC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|50839622|gb|AAT82289.1| peptidyl-tRNA hydrolase [Propionibacterium acnes KPA171202]
gi|289154933|gb|EFD03615.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes SK187]
gi|289158357|gb|EFD06574.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes J165]
gi|291375619|gb|ADD99473.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes SK137]
gi|313765347|gb|EFS36711.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL013PA1]
gi|313792870|gb|EFS40937.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA1]
gi|313802677|gb|EFS43899.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA2]
gi|313806690|gb|EFS45197.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL087PA2]
gi|313814602|gb|EFS52316.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL025PA1]
gi|313815246|gb|EFS52960.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL059PA1]
gi|313817233|gb|EFS54947.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL046PA2]
gi|313821705|gb|EFS59419.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL036PA1]
gi|313824404|gb|EFS62118.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL036PA2]
gi|313826761|gb|EFS64475.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL063PA1]
gi|313828551|gb|EFS66265.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL063PA2]
gi|313840313|gb|EFS78027.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL086PA1]
gi|314916010|gb|EFS79841.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL005PA4]
gi|314916915|gb|EFS80746.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL050PA1]
gi|314921556|gb|EFS85387.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL050PA3]
gi|314931120|gb|EFS94951.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL067PA1]
gi|314954823|gb|EFS99229.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL027PA1]
gi|314958989|gb|EFT03091.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL002PA1]
gi|314961284|gb|EFT05385.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL002PA2]
gi|314964288|gb|EFT08388.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL082PA1]
gi|314980490|gb|EFT24584.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL072PA2]
gi|314987503|gb|EFT31594.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL005PA2]
gi|314989031|gb|EFT33122.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL005PA3]
gi|315078696|gb|EFT50727.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL053PA2]
gi|315081844|gb|EFT53820.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL078PA1]
gi|315082663|gb|EFT54639.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL027PA2]
gi|315086372|gb|EFT58348.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL002PA3]
gi|315087620|gb|EFT59596.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL072PA1]
gi|315099744|gb|EFT71720.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL059PA2]
gi|315101951|gb|EFT73927.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL046PA1]
gi|315106542|gb|EFT78518.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL030PA1]
gi|315110330|gb|EFT82306.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL030PA2]
gi|327445368|gb|EGE92022.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL013PA2]
gi|327454825|gb|EGF01480.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL087PA3]
gi|327455682|gb|EGF02337.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL083PA2]
gi|327456829|gb|EGF03484.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL092PA1]
gi|328755881|gb|EGF69497.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL087PA1]
gi|328756664|gb|EGF70280.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL025PA2]
gi|328758615|gb|EGF72231.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL020PA1]
Length = 200
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDG------- 53
++V GLGNPG Y RHN+G I + + + AE+ +L
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 54 ---LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
IL++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LRLK GGGD
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGITP-DHLIVVHDEIDLDPGRLRLKKGGGDN 123
Query: 111 GHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
GHNGLKSI ++ R+R+G+GRPP VL + +R + + A ++
Sbjct: 124 GHNGLKSIRAHLRTGDFIRVRLGVGRPPGHQDPADWVLARVPARQRAEMGVQVALAADAV 183
Query: 170 PLLAKREDVSFLNHIVS 186
+ + + N S
Sbjct: 184 ESIIIQGLAAAQNRFNS 200
>gi|296272452|ref|YP_003655083.1| peptidyl-tRNA hydrolase [Arcobacter nitrofigilis DSM 7299]
gi|296096626|gb|ADG92576.1| peptidyl-tRNA hydrolase [Arcobacter nitrofigilis DSM 7299]
Length = 183
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 75/173 (43%), Positives = 105/173 (60%), Gaps = 6/173 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
MF++ GLGNPG +Y NRHN+GF+ ID I K F+A++ + +L+
Sbjct: 1 MFLIVGLGNPGTKYENNRHNVGFLVIDAIAKNLTTSNINKSNFNADVLKTSNQ----LLV 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG ++ + +YKL NLE+ +VIHDDLDL FGT++ K GGG GHNGL+SI
Sbjct: 57 KPTTYMNNSGLAVHAIKEYYKL-NLEDIIVIHDDLDLPFGTVKFKIGGGHGGHNGLRSID 115
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G Y R+RIGIG+P ++ +VL +FS E L II + ++ L
Sbjct: 116 SHVGNMYIRVRIGIGKPESKNNVANYVLSDFSKEELNKLEGIISHTINAIESL 168
>gi|330951111|gb|EGH51371.1| peptidyl-tRNA hydrolase [Pseudomonas syringae Cit 7]
Length = 175
Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 66/171 (38%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G ++RI + ++KF G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVPERKFFGLTGRFTHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G + RLR+GIG P D + + VLG E+ L ID LP
Sbjct: 125 LGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLP 175
>gi|242280389|ref|YP_002992518.1| peptidyl-tRNA hydrolase [Desulfovibrio salexigens DSM 2638]
gi|259535156|sp|C6C0N2|PTH_DESAD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|242123283|gb|ACS80979.1| peptidyl-tRNA hydrolase [Desulfovibrio salexigens DSM 2638]
Length = 205
Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 67/194 (34%), Positives = 102/194 (52%), Gaps = 13/194 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFH-------AEISEGQLDGLR 55
++ GLGNPG EY + RHNIGFM +D + +F E+ L G
Sbjct: 6 LIVGLGNPGSEYAKTRHNIGFMAVDALAEV-AKSRKSMRFKEMGISGDFELFSLNLAGNN 64
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+ KP T+MNLSG+++ + Y + + + VIHD+LDL G ++ K GGG+ GH GL
Sbjct: 65 VLATKPLTYMNLSGKAVAAICGKYSIA-VSDVYVIHDELDLPCGRMKFKKGGGNNGHRGL 123
Query: 116 KSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+SI EK G N+ R+R+GIGRP ++ + +VL F++ E + + L L +
Sbjct: 124 ESIQEKMGSPNFFRIRVGIGRPEFSSQVKDYVLEEFNTQELAIAAQMSQAAIKGLNLHFR 183
Query: 175 RE---DVSFLNHIV 185
R F+N +
Sbjct: 184 RGQGTATQFMNSFM 197
>gi|89890033|ref|ZP_01201544.1| peptidyl-tRNA hydrolase [Flavobacteria bacterium BBFL7]
gi|89518306|gb|EAS20962.1| peptidyl-tRNA hydrolase [Flavobacteria bacterium BBFL7]
Length = 211
Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 67/185 (36%), Positives = 91/185 (49%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G +Y E RHNIGF +D I +++ G + L+KP
Sbjct: 27 FLIIGLGNIGDKYTETRHNIGFKVLDEIARIKDSSFETLTL-GDVATITHKGKKITLLKP 85
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ MN +P E LV+ DDL+L FGTLR+K G D GHNGLK K
Sbjct: 86 STYMNLSGKAIKYYMNQESIPK-EQILVVTDDLNLPFGTLRMKAKGTDGGHNGLKDTQIK 144
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
NY RLR GI + +VLG ++ E L ID A + +
Sbjct: 145 LNTPNYPRLRFGISDEFSKGRQVDYVLGEWNKDELKALPERIDKAAAACLSFTHAGLANT 204
Query: 181 LNHIV 185
+N
Sbjct: 205 MNQFN 209
>gi|237785152|ref|YP_002905857.1| Peptidyl-tRNA hydrolase [Corynebacterium kroppenstedtii DSM 44385]
gi|237758064|gb|ACR17314.1| Peptidyl-tRNA hydrolase [Corynebacterium kroppenstedtii DSM 44385]
Length = 222
Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 78/194 (40%), Positives = 110/194 (56%), Gaps = 11/194 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF----FPAWKKKFHAEISEGQLDGL--- 54
F+V GLGNPG +Y RHNIG M +D + S + KK + + +E L G
Sbjct: 28 FLVIGLGNPGSQYEGTRHNIGQMALDEVASRALPVPVTLSTHKKTNTDSAEMSLSGPNGS 87
Query: 55 --RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGH 112
IL +P+++MNLSG + F+ + + +N +V+HDDLDLDFGT+RLK GGG+ GH
Sbjct: 88 SVSLILGRPRSYMNLSGGPTSALARFFHI-SPQNVIVLHDDLDLDFGTVRLKRGGGEGGH 146
Query: 113 NGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
NGL+ I++ G K+Y R+R+GIGRPP VL FS+ E + + A ++ L
Sbjct: 147 NGLRDITKALGTKDYLRVRLGIGRPPGRMSPADFVLKKFSTRESVDVDLMCSTAADAVEL 206
Query: 172 LAKREDVSFLNHIV 185
LA R N I
Sbjct: 207 LATRGLEYAQNTIH 220
>gi|54295491|ref|YP_127906.1| peptidyl-tRNA hydrolase [Legionella pneumophila str. Lens]
gi|68052899|sp|Q5WTE7|PTH_LEGPL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|53755323|emb|CAH16819.1| hypothetical protein lpl2578 [Legionella pneumophila str. Lens]
Length = 189
Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG Y + RHN G + + H KK AE++E ++ L+
Sbjct: 4 KLIVGLRNPGSAYEQTRHNAGAWLVTALAQRHNSHFKIDKKMQAELTEIDINNHPCRLLL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ+ + FYK+ E L++HD+LDL G ++LKTGGG GHNGL+ I+
Sbjct: 64 PLTFMNHSGQTTRIISQFYKIEPGE-ILIVHDELDLPVGRIKLKTGGGHGGHNGLRDITA 122
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + RLRIGIG P + ++VL S +R + ID +P++ +
Sbjct: 123 QLGTGEFHRLRIGIGHPGHKDLVHQYVLSRPSMHDRQQIYDAIDRGIAIIPIVLSGDIAR 182
Query: 180 FLNHIVS 186
+N + +
Sbjct: 183 AMNQVNA 189
>gi|308235055|ref|ZP_07665792.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis ATCC 14018]
gi|311114597|ref|YP_003985818.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis ATCC 14019]
gi|310946091|gb|ADP38795.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis ATCC 14019]
Length = 199
Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 58/193 (30%), Positives = 103/193 (53%), Gaps = 10/193 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD----GLRTI 57
+++ GLGNPG +Y RHN+GFM D + K +++ +G ++ +
Sbjct: 6 WLIVGLGNPGSKYEGTRHNMGFMVADVLSERWSISFSDHKGLSKLGKGVMNLDGKSAKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP TFMN SG ++ + ++Y++ ++ ++IHDD+DLDFG +++K+GG GHNG++S
Sbjct: 66 LAKPLTFMNDSGAAVSSISSYYQI-ETDHIVIIHDDMDLDFGRIKVKSGGSAGGHNGIRS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDT----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I G Y R+R+G+G + + VLG F+ ++ L + + A ++ +
Sbjct: 125 IDRSLGTPQYARVRMGVGHAQRGAHAHDNTVNWVLGGFAGAQKSELPNFLADGADAVESV 184
Query: 173 AKREDVSFLNHIV 185
R + H
Sbjct: 185 IFRGLSATQEHFN 197
>gi|297572062|ref|YP_003697836.1| peptidyl-tRNA hydrolase [Arcanobacterium haemolyticum DSM 20595]
gi|296932409|gb|ADH93217.1| peptidyl-tRNA hydrolase [Arcanobacterium haemolyticum DSM 20595]
Length = 195
Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLD------G 53
M+ V GLGNPG Y RHNIG M ID + + K+ ++ G
Sbjct: 1 MYTVVGLGNPGPTYAATRHNIGQMVIDTLARKLGISLSMHKQSQTRSGSTRVGVAPGQPG 60
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
+ +L +MN SG +M++Y ++E+ +VIHD+LDL FGTLRLK GGG+ GHN
Sbjct: 61 EQVVLGISTGYMNTSGGPTKALMSYY-HGDVEHLIVIHDELDLPFGTLRLKRGGGEGGHN 119
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GLKSIS+ G KNY RLR GIGRPP VL FS+ ER L +I+ A ++ +
Sbjct: 120 GLKSISQSTGSKNYIRLRCGIGRPPGRQDPADFVLSAFSAQERKELELMIECAADAVCDV 179
Query: 173 AKREDVSFLNHIVSVR 188
+ + +
Sbjct: 180 IELGLEKATMRLHTAN 195
>gi|145295093|ref|YP_001137914.1| peptidyl-tRNA hydrolase [Corynebacterium glutamicum R]
gi|140845013|dbj|BAF54012.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 204
Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG +Y RHN+G+MC D + H + QL + ++
Sbjct: 25 WLVVGLGNPGAKYESTRHNVGYMCQDMLIDAHQQQPLTPATGYKALTTQLA-PEVLAVRS 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ + + +P E +VIHD+LDL G +RLK GG + GHNGLKS++E+
Sbjct: 84 TTFMNHSGQGVAPIAAALGIP-AERIIVIHDELDLPAGKVRLKKGGNENGHNGLKSLTEE 142
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y R+RIGI RPP + +VL + P I+ A ++ LL + +
Sbjct: 143 LGTRDYLRVRIGISRPPAGMAVPDYVLEPVDHDQ-----PGIELAAEAVDLLLAQGLSAA 197
Query: 181 LNHIVS 186
N I S
Sbjct: 198 QNAIHS 203
>gi|325286676|ref|YP_004262466.1| peptidyl-tRNA hydrolase [Cellulophaga lytica DSM 7489]
gi|324322130|gb|ADY29595.1| Peptidyl-tRNA hydrolase [Cellulophaga lytica DSM 7489]
Length = 229
Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 62/186 (33%), Positives = 96/186 (51%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F+V GLGN G EY E RHNIGF +D +K ++ ++ G + ++P
Sbjct: 45 FLVVGLGNIGTEYTETRHNIGFKILDAFAKKESLTFEPQKL-GAVTTYKIKGRTILFLQP 103
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + K+P LEN LVI DD++L FGT+R+KT G D GHNGLK
Sbjct: 104 STYMNLSGKAIRYWLEKEKIP-LENLLVITDDINLPFGTIRVKTKGSDGGHNGLKDTQNI 162
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+Y R R G+G + +VLG ++ E+ + ++ + +
Sbjct: 163 LQTTSYNRYRFGVGADFGKGRQVDYVLGEWNQEEQEKMPERLERSIELIKSFVLAGIKTT 222
Query: 181 LNHIVS 186
+NH +
Sbjct: 223 MNHFNN 228
>gi|291456464|ref|ZP_06595854.1| aminoacyl-tRNA hydrolase [Bifidobacterium breve DSM 20213]
gi|291381741|gb|EFE89259.1| aminoacyl-tRNA hydrolase [Bifidobacterium breve DSM 20213]
Length = 199
Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 61/181 (33%), Positives = 97/181 (53%), Gaps = 10/181 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG--QLDGL--RTI 57
+++AGLGNPG +Y + RHN+GFM D + K A + + LDG +
Sbjct: 6 WLIAGLGNPGKKYEDTRHNMGFMTADVLAERWSVNFADHKGLAMLGKSTMNLDGRTIKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SG ++ + +Y++ ++ +VIHDD+DL+FG +++K GG GHNG+KS
Sbjct: 66 LAKPLTYMNDSGNAVASISAYYQIEP-DHIVVIHDDMDLEFGRIKVKAGGSAGGHNGIKS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDT----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I G Y R+R+G+G + + VLG F +R L + + A + +
Sbjct: 125 IDRSLGTPKYARVRMGVGHSKRGAHAHDNTVNWVLGGFGPDQRKQLPEFLADGADAAEEI 184
Query: 173 A 173
Sbjct: 185 I 185
>gi|298530962|ref|ZP_07018363.1| peptidyl-tRNA hydrolase [Desulfonatronospira thiodismutans ASO3-1]
gi|298508985|gb|EFI32890.1| peptidyl-tRNA hydrolase [Desulfonatronospira thiodismutans ASO3-1]
Length = 216
Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 109/193 (56%), Gaps = 10/193 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCID-RIHSFHFFPAWKKKFHAEISEGQL-------DGL 54
++AGLGNPG+ Y RHN+GF+ +D + S + P + E +E L D
Sbjct: 16 LIAGLGNPGNRYRNTRHNMGFLVLDHAMDSARWEPGEHVRCLDEKNEFTLWEWTMPEDPA 75
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L+KP T+MN SG+++ V + + E+ LV+HD++DL G ++LK GGG AGHNG
Sbjct: 76 ARYLLKPMTYMNRSGKAVARVADRLNIL-AESILVVHDEVDLPLGRVKLKFGGGLAGHNG 134
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
L+SI++ G +++ RLRIG+GRP D + +VL F+ E+ L +D +L LL
Sbjct: 135 LRSIADHLGSRDFARLRIGVGRPEDQISLSEYVLQKFTPEEQNDLKDSLDRSVAALRLLF 194
Query: 174 KREDVSFLNHIVS 186
L HI S
Sbjct: 195 THGKQPALQHINS 207
>gi|120437822|ref|YP_863508.1| peptidyl-tRNA hydrolase [Gramella forsetii KT0803]
gi|117579972|emb|CAL68441.1| peptidyl-tRNA hydrolase [Gramella forsetii KT0803]
Length = 208
Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats.
Identities = 65/185 (35%), Positives = 94/185 (50%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G +Y RHNIGF +D + +K +++ + G +L+KP
Sbjct: 24 FLIVGLGNIGPKYENTRHNIGFKILDELAREKEVTFETQKL-GDVATFKFKGRTFVLLKP 82
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M K+ NLEN LV+ DDL+L+FGTLRLKT G D GHNGLK I +
Sbjct: 83 STYMNLSGKAVNYWMQKEKI-NLENLLVVTDDLNLNFGTLRLKTKGSDGGHNGLKDIQSQ 141
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y R R GI + +VLG + E + + A + +
Sbjct: 142 LNTTKYNRFRFGISDEFSKGSQVDYVLGEWGDDEESKMSERLKTSAELIQSFGTAGVSNT 201
Query: 181 LNHIV 185
+N
Sbjct: 202 MNTFN 206
>gi|300774880|ref|ZP_07084743.1| aminoacyl-tRNA hydrolase [Chryseobacterium gleum ATCC 35910]
gi|300506695|gb|EFK37830.1| aminoacyl-tRNA hydrolase [Chryseobacterium gleum ATCC 35910]
Length = 187
Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 98/185 (52%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHNIGF D+I F ++EG+ G + ++KP
Sbjct: 3 YLIVGLGNKGSEYENTRHNIGFKVADKIAETLEVSFNTSNF-GCLAEGKHKGRKVFVLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M +P LEN L++ DDL L FGTLRLK G DAGHNGLK+I+E
Sbjct: 62 DTYMNLSGNAVKYWMQKENIP-LENVLIVTDDLALPFGTLRLKGKGSDAGHNGLKNINEV 120
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+NY RLR GI + +VLG ++ E L I+ +++ +
Sbjct: 121 LQTQNYARLRFGISADFAAGRQVDYVLGTWNEEEAEKLTERIETFSKAALSFVFAGLNNT 180
Query: 181 LNHIV 185
++
Sbjct: 181 MSAFN 185
>gi|54298642|ref|YP_125011.1| peptidyl-tRNA hydrolase [Legionella pneumophila str. Paris]
gi|68052900|sp|Q5X1N7|PTH_LEGPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|53752427|emb|CAH13859.1| hypothetical protein lpp2706 [Legionella pneumophila str. Paris]
Length = 189
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 98/187 (52%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG Y + RHN G + + H KK AE++E ++ L
Sbjct: 4 KLIVGLRNPGSAYEQTRHNAGAWLVTALAQRHNSHFKIDKKMQAELTEIDINNHPCRLAL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ+ + FYK+ E L++HD+LDL G ++LKTGGG GHNGL+ I+
Sbjct: 64 PLTFMNHSGQTTRIISQFYKIEPGE-ILIVHDELDLPVGRIKLKTGGGHGGHNGLRDITA 122
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + RLRIGIG P + ++VL S +R + ID +P++ +
Sbjct: 123 QLGTGEFHRLRIGIGHPGHKDLVHQYVLSRPSMHDRQQIYDAIDRGIAIIPIVLSGDMAR 182
Query: 180 FLNHIVS 186
+N + +
Sbjct: 183 AMNQVNA 189
>gi|157736890|ref|YP_001489573.1| peptidyl-tRNA hydrolase [Arcobacter butzleri RM4018]
gi|167011989|sp|A8ESI0|PTH_ARCB4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157698744|gb|ABV66904.1| peptidyl-tRNA hydrolase [Arcobacter butzleri RM4018]
Length = 183
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 69/180 (38%), Positives = 100/180 (55%), Gaps = 6/180 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M+++ GLGN G +Y RHN+GF+ ID + F + + L +
Sbjct: 1 MYLIVGLGNIGEKYQYTRHNVGFLVIDEMAKNLQTSNVNNSNFQSTL----LKSGYNLFA 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG ++ + +YK+ +LEN +VIHDDLDL FGT++ K GGG GHNGLKS+
Sbjct: 57 KPTTYMNNSGVAVHSIKEYYKI-DLENIIVIHDDLDLPFGTVKFKIGGGHGGHNGLKSLD 115
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
GK+Y R+RIGIG+P + + VL +FS E L II + ++ L +
Sbjct: 116 SHIGKDYIRVRIGIGKPQNKDDVANFVLSDFSKEELNKLEDIIKHTINAIEALKTADIDE 175
>gi|257457974|ref|ZP_05623133.1| peptidyl-tRNA hydrolase [Treponema vincentii ATCC 35580]
gi|257444687|gb|EEV19771.1| peptidyl-tRNA hydrolase [Treponema vincentii ATCC 35580]
Length = 205
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 63/171 (36%), Positives = 87/171 (50%), Gaps = 13/171 (7%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE---GQLDGLRTILI 59
++A LGN G EY RHN ++ DR++ W+ KF G +
Sbjct: 4 LIAFLGNTGREYERTRHNAAWIAADRLNICRGIS-WQHKFRGLYGRFPAAVTGGQAVHAL 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+T+MNLSG+S+ E F+K+P E L++HD+L+L L LK GG GHNGL+S+
Sbjct: 63 KPETYMNLSGESVGEAAQFFKIPPAE-ILIVHDELELPPAALSLKWSGGLGGHNGLRSVK 121
Query: 120 EKCGK-NYKRLRIGIGRPPDTA-------HIIRHVLGNFSSPERYFLLPII 162
G ++ RLRIGIGRP I +VL FS E L +
Sbjct: 122 AALGTADFWRLRIGIGRPGGKKSSSADHPDIAGYVLSPFSQEEFALLDTAL 172
>gi|307611528|emb|CBX01205.1| hypothetical protein LPW_29041 [Legionella pneumophila 130b]
Length = 189
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG Y + RHN G + + H KK AE++E ++ L+
Sbjct: 4 KLIVGLRNPGSAYEQTRHNAGAWLVTALAQRHNSHFKIDKKMQAELTEIDINNHPCRLVL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ+ + FYK+ E L++HD+LDL G ++LKTGGG GHNGL+ I+
Sbjct: 64 PLTFMNHSGQTTRIISQFYKIEPGE-ILIVHDELDLPVGRIKLKTGGGHGGHNGLRDITA 122
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + RLRIGIG P + ++VL S +R + ID +P++ +
Sbjct: 123 QLGTGEFHRLRIGIGHPGHKDLVHQYVLSRPSMHDRQQIYDAIDRGIAIIPIVLSGDIAR 182
Query: 180 FLNHIVS 186
+N + +
Sbjct: 183 AMNQVNA 189
>gi|52842859|ref|YP_096658.1| peptidyl-tRNA hydrolase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|68052907|sp|Q5ZS66|PTH_LEGPH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|52629970|gb|AAU28711.1| peptidyl tRNA hydrolase [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
Length = 189
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG Y + RHN G + + H KK AE++E ++ L+
Sbjct: 4 KLIVGLRNPGSAYEQTRHNAGAWLVTALAQRHNSHFKIDKKMQAELTEIDINNHPCRLVL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ+ + FYK+ E L++HD+LDL G ++LKTGGG GHNGL+ I+
Sbjct: 64 PLTFMNHSGQTTRIISQFYKIEPGE-ILIVHDELDLPVGRIKLKTGGGHGGHNGLRDITA 122
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + RLRIGIG P + ++VL S +R + ID +P++ +
Sbjct: 123 QLGTGEFHRLRIGIGHPGHKDLVHQYVLSRPSMHDRQQIYDAIDRGIAIIPIVLSGDMAR 182
Query: 180 FLNHIVS 186
+N + +
Sbjct: 183 AMNQVNA 189
>gi|303327049|ref|ZP_07357491.1| aminoacyl-tRNA hydrolase [Desulfovibrio sp. 3_1_syn3]
gi|302863037|gb|EFL85969.1| aminoacyl-tRNA hydrolase [Desulfovibrio sp. 3_1_syn3]
Length = 205
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 68/181 (37%), Positives = 94/181 (51%), Gaps = 9/181 (4%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSF-----HFFPAWKKKFHAEISEGQLD--GLRT 56
+ GLGNPG Y RHN GF + + KF E+ +L
Sbjct: 7 LVGLGNPGPRYEGTRHNCGFALVSALLELADKEGGLSSLNGGKFSCELWRVRLSQLNGTW 66
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+ PQTFMNLSGQ + ++ ++KL E +V HD+LD+ G LR K GGG+AGHNGLK
Sbjct: 67 LAAMPQTFMNLSGQCVQPLLVWHKLKP-EQLVVAHDELDIPAGELRFKRGGGNAGHNGLK 125
Query: 117 SISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
SI+E G ++ RLR+GIGRPP +I VLG + + L ++ +L A +
Sbjct: 126 SITELLGTPDFYRLRLGIGRPPHKGDVINWVLGRPDAEDAERLRAVLPKALDTLFAFADK 185
Query: 176 E 176
Sbjct: 186 G 186
>gi|327333604|gb|EGE75324.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes HL096PA3]
Length = 200
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 13/197 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDG------- 53
++V GLGNPG Y RHN+G I + + + AE+ +L
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 54 ---LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
IL++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LRLK GGGD
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGITP-DHLIVVHDEIDLDPGRLRLKKGGGDN 123
Query: 111 GHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
GHNGLKSI ++ R+R+G+GRPP VL + +R + + +A ++
Sbjct: 124 GHNGLKSIRAHLRTGDFIRVRLGVGRPPGHQDPADWVLARVPARQRAEMGVQVALVADAV 183
Query: 170 PLLAKREDVSFLNHIVS 186
+ + + N S
Sbjct: 184 ESIIIQGLAAAQNRFNS 200
>gi|184201365|ref|YP_001855572.1| peptidyl-tRNA hydrolase [Kocuria rhizophila DC2201]
gi|183581595|dbj|BAG30066.1| peptidyl-tRNA hydrolase [Kocuria rhizophila DC2201]
Length = 208
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 63/186 (33%), Positives = 106/186 (56%), Gaps = 4/186 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTILIK 60
+V GLGNPG Y RHNIG + + + + + A ++E ++ R +L +
Sbjct: 19 LVVGLGNPGGRYAGTRHNIGAVVVAELAARAGARLSAHRARAAVAETRMRPGAPRLVLAQ 78
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P ++MN+SG + + +Y L L + +V+HDD+DL FG ++LK GGG+ GHNGL+ I++
Sbjct: 79 PLSYMNVSGGPVSALAKYYSL-GLADLVVVHDDIDLPFGAVKLKRGGGEGGHNGLRDITK 137
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K+Y R+R+G+GRPP +VL FS E L ++ + A ++ +L +++ +
Sbjct: 138 AMGGKDYVRVRVGVGRPPGRMDTADYVLKRFSGAEAKELPLLVSDAADAVEMLTEQDLTA 197
Query: 180 FLNHIV 185
H
Sbjct: 198 AQQHFH 203
>gi|23335260|ref|ZP_00120497.1| COG0193: Peptidyl-tRNA hydrolase [Bifidobacterium longum DJO10A]
gi|23465593|ref|NP_696196.1| peptidyl-tRNA hydrolase [Bifidobacterium longum NCC2705]
gi|189439641|ref|YP_001954722.1| peptidyl-tRNA hydrolase [Bifidobacterium longum DJO10A]
gi|213692706|ref|YP_002323292.1| Aminoacyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|227546192|ref|ZP_03976241.1| aminoacyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|296453841|ref|YP_003660984.1| aminoacyl-tRNa hydrolase [Bifidobacterium longum subsp. longum
JDM301]
gi|312133039|ref|YP_004000378.1| pth [Bifidobacterium longum subsp. longum BBMN68]
gi|317481856|ref|ZP_07940883.1| peptidyl-tRNA hydrolase [Bifidobacterium sp. 12_1_47BFAA]
gi|322688797|ref|YP_004208531.1| peptidyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
157F]
gi|46576826|sp|Q8G5I6|PTH_BIFLO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238692067|sp|B3DSV5|PTH_BIFLD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783853|sp|B7GTK5|PTH_BIFLI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|23326261|gb|AAN24832.1| peptidyl-tRNA hydrolase [Bifidobacterium longum NCC2705]
gi|189428076|gb|ACD98224.1| Peptidyl-tRNA hydrolase [Bifidobacterium longum DJO10A]
gi|213524167|gb|ACJ52914.1| Aminoacyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|227213173|gb|EEI81045.1| aminoacyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|291517135|emb|CBK70751.1| peptidyl-tRNA hydrolase [Bifidobacterium longum subsp. longum F8]
gi|296183272|gb|ADH00154.1| Aminoacyl-tRNA hydrolase [Bifidobacterium longum subsp. longum
JDM301]
gi|311774028|gb|ADQ03516.1| Pth [Bifidobacterium longum subsp. longum BBMN68]
gi|316916647|gb|EFV38042.1| peptidyl-tRNA hydrolase [Bifidobacterium sp. 12_1_47BFAA]
gi|320458862|dbj|BAJ69483.1| peptidyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|320460133|dbj|BAJ70753.1| peptidyl-tRNA hydrolase [Bifidobacterium longum subsp. infantis
157F]
Length = 199
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 10/181 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG--QLDGLRT--I 57
+++AGLGNPG +Y + RHN+GFM D + K A + + LDG
Sbjct: 6 WLIAGLGNPGKKYEDTRHNMGFMTADVLAERWTVNFADHKGLAMLGKSVMNLDGRTVKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP T+MN SG ++ + +Y++ ++ +VIHDD+DL+FG +++K GG GHNG+KS
Sbjct: 66 LAKPLTYMNDSGNAVASISAYYQIEP-DHIVVIHDDMDLEFGRIKVKAGGSAGGHNGIKS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDT----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I G Y R+R+G+G + + VLG F +R L + + A + +
Sbjct: 125 IDRSLGTPKYARVRMGVGHSKRGANAHDNTVNWVLGGFGPDQRKQLPEFLADGADAAEDI 184
Query: 173 A 173
Sbjct: 185 I 185
>gi|189502140|ref|YP_001957857.1| peptidyl-tRNA hydrolase [Candidatus Amoebophilus asiaticus 5a2]
gi|238692312|sp|B3ESC6|PTH_AMOA5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189497581|gb|ACE06128.1| hypothetical protein Aasi_0745 [Candidatus Amoebophilus asiaticus
5a2]
Length = 191
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 93/186 (50%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN GHEY RHNIGF +D++ + H + A I+ G LIKP
Sbjct: 3 YLIIGLGNIGHEYELTRHNIGFQVLDQLAAEHQVKFQIDRL-ALITSFSYKGRSLYLIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG++ +N K+P +EN L I DDL L FG LRL+ G AGHNGLKS+ E
Sbjct: 62 TTYMNLSGKAAQYWINKLKIP-IENTLTIVDDLALPFGKLRLRPQGSSAGHNGLKSLEEY 120
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ Y RLR GIG +VL F E L I+ + + +
Sbjct: 121 LKTQAYPRLRFGIGNDFTKGQQSNYVLSRFKDQELSLLESPINQACKIIKSFSTLGITRT 180
Query: 181 LNHIVS 186
+ +
Sbjct: 181 MEQCNA 186
>gi|227487498|ref|ZP_03917814.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227541226|ref|ZP_03971275.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51866]
gi|227092480|gb|EEI27792.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227182999|gb|EEI63971.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51866]
Length = 168
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 32/188 (17%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG EY E RHN+GF +D + + KP
Sbjct: 12 WLVVGLGNPGPEYAETRHNVGFRVVDALAARAG---------------------VKFCKP 50
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+++ + YK+P E +V+HD+LDL G ++++ GG + GHNGLKS+SE
Sbjct: 51 QTYMNRSGEAVAPLARRYKVPP-ERIIVVHDELDLPEGRIKVRLGGNENGHNGLKSVSEC 109
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y R+R+GIGRPP + VLG I ++ + + +
Sbjct: 110 LGTRDYIRVRVGIGRPPAGTGVADWVLGTGGP---------IAGAPEAVRAILEEGFATA 160
Query: 181 LNHIVSVR 188
+HI + +
Sbjct: 161 QSHINARK 168
>gi|262276843|ref|ZP_06054636.1| peptidyl-tRNA hydrolase [alpha proteobacterium HIMB114]
gi|262223946|gb|EEY74405.1| peptidyl-tRNA hydrolase [alpha proteobacterium HIMB114]
Length = 184
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 76/187 (40%), Positives = 118/187 (63%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++AGLGNP +Y NRHN+GF +D + S +KKKF ++E ++D + +L+K
Sbjct: 1 MFLLAGLGNPDQKYQNNRHNVGFAFLDFLVSAEN---YKKKFKGLLAEEEIDNQKILLLK 57
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG SL E+ FYKL + EN VIHDDLDL+ G +++K GG GHNG++SISE
Sbjct: 58 PMTYMNLSGGSLFEIKKFYKL-DNENIFVIHDDLDLEIGKIKVKNGGSSGGHNGIESISE 116
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ R+R+GIG P + + +VL +F E + +I ++L L+ ++ F
Sbjct: 117 YIGNDFNRIRVGIGHPGEKNLVENYVLNDFKKEEVKLIENSFASIKKNLQLVLLKKFDEF 176
Query: 181 LNHIVSV 187
+ + ++
Sbjct: 177 SSKVNNI 183
>gi|256420580|ref|YP_003121233.1| peptidyl-tRNA hydrolase [Chitinophaga pinensis DSM 2588]
gi|256035488|gb|ACU59032.1| peptidyl-tRNA hydrolase [Chitinophaga pinensis DSM 2588]
Length = 193
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY + RHNIGF D H + + A+++E + G ++IKP
Sbjct: 3 YLIVGLGNIGTEYEQTRHNIGFDIADAFVKKHGGTYREDRL-ADVAEVKWKGRIFVVIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M+ K+P LEN LV+ DDL L +RL+ GG DAG NGLKSI E
Sbjct: 62 TTYMNLSGKAVKYWMDKEKVP-LENILVLVDDLALPLEVIRLRPGGSDAGQNGLKSIQEL 120
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G N Y RLR GIG + VLG +++ E ++ + + A
Sbjct: 121 LGTNQYPRLRFGIGNNYPRGRQVEFVLGKWTNDEWPVVMGKLGKCVELIESYASIGLPRT 180
Query: 181 LNHIVSV 187
+N ++
Sbjct: 181 MNIYNTL 187
>gi|124010549|ref|ZP_01695177.1| peptidyl-tRNA hydrolase [Microscilla marina ATCC 23134]
gi|123982280|gb|EAY23847.1| peptidyl-tRNA hydrolase [Microscilla marina ATCC 23134]
Length = 188
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 66/182 (36%), Positives = 94/182 (51%), Gaps = 2/182 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGN G EY RHNIGF+ +D + P + A +E + G LIKP
Sbjct: 3 YLIAGLGNIGAEYELTRHNIGFLVLDHLADKQGAPDFSTHKLAMKTEFKHKGRTFHLIKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ + K+P EN LVI DD+ L LRL+ G D GHNGLK+I E
Sbjct: 63 TTYMNLSGKAINYWLQELKIPR-ENLLVIVDDIALPHAKLRLRGKGSDGGHNGLKNIQEV 121
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y R+R G+G + +++VL NF+ + L +D A
Sbjct: 122 LGNSQYARIRFGVGNDFNKGEQVKYVLANFNKEQLDTLTEPMDLACDMTISFATIGLDRA 181
Query: 181 LN 182
+N
Sbjct: 182 MN 183
>gi|283783132|ref|YP_003373886.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis 409-05]
gi|298253894|ref|ZP_06977481.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 5-1]
gi|283441026|gb|ADB13492.1| aminoacyl-tRNA hydrolase [Gardnerella vaginalis 409-05]
gi|297532037|gb|EFH71012.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis 5-1]
Length = 199
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 61/181 (33%), Positives = 101/181 (55%), Gaps = 10/181 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG--QLDGL--RTI 57
+++AGLGNPG +Y RHN+GFM D + K A++ +G LDG +
Sbjct: 6 WLIAGLGNPGTKYEGTRHNMGFMVADVLAQRWSVSLSDHKGLAKLGKGVMNLDGRVAKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP TFMN SG ++ + ++Y++ ++ ++IHDD+DLDFG +++K GG GHNG++S
Sbjct: 66 LAKPLTFMNDSGAAVSSISSYYQIEP-DHIVIIHDDMDLDFGRIKVKAGGSAGGHNGIRS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDT----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I G Y R+R+G+G + + VLG F++ ++ L + + A + +
Sbjct: 125 IDRSLGTPQYSRVRMGVGHAQRGAHAHDNTVNWVLGGFAAAQKSDLPNFLADGADAAESI 184
Query: 173 A 173
Sbjct: 185 I 185
>gi|78778637|ref|YP_396749.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9312]
gi|119390977|sp|Q31CT2|PTH_PROM9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|78712136|gb|ABB49313.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9312]
Length = 200
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 107/193 (55%), Gaps = 9/193 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIK 60
+++ GLGNPG +Y +RHNIGF+ ++ + + K K + SE + + L
Sbjct: 5 YLI-GLGNPGKKYSNSRHNIGFLLLENLSKKYNSSFLLKDKLKSFYSEFKANDSTYRLFL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++L ++++YK+ NL VI DD DL G +R + G GHNGLKSI E
Sbjct: 64 PNTFMNNSGEAVLAILDWYKI-NLNQIFVIVDDKDLPLGKIRFRKKGSSGGHNGLKSIIE 122
Query: 121 KC-GKNYKRLRIGIGRPPDTA-----HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
K ++ R+RIGIG PP T + I HVLGN S E+ L + + SL L
Sbjct: 123 KLQTHDFNRIRIGIGSPPSTKETNNFNTISHVLGNISREEKSILDKVYVRVIESLEQLNT 182
Query: 175 REDVSFLNHIVSV 187
+++ +N + S
Sbjct: 183 KKEEYIINKLNSF 195
>gi|314926810|gb|EFS90641.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL036PA3]
Length = 200
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDG------- 53
++V GLGNPG Y RHN+G I + + + AE+ +L
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 54 ---LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
IL++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LRLK GGGD
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGITP-DHLIVVHDEIDLDPGRLRLKKGGGDN 123
Query: 111 GHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
GHNGLKSI ++ R+R+G+GRPP VL + +R + + A ++
Sbjct: 124 GHNGLKSIRAHIRTGDFIRVRLGVGRPPGHQDPADWVLARVPARQRAEMGVQVALAADAV 183
Query: 170 PLLAKREDVSFLNHIVS 186
+ + + N S
Sbjct: 184 ESIIIQGLAAAQNRFNS 200
>gi|13357634|ref|NP_077908.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|167971017|ref|ZP_02553294.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 6 str. ATCC
27818]
gi|168282151|ref|ZP_02689818.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|168308309|ref|ZP_02690984.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|170762127|ref|YP_001752157.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|14195087|sp|Q9PR67|PTH_UREPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038172|sp|B1AI63|PTH_UREP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|11279559|pir||B82937 peptidyl-tRNA hydrolase UU078 [imported] - Ureaplasma urealyticum
gi|6899029|gb|AAF30483.1|AE002107_7 peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|168827704|gb|ACA32966.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|171902841|gb|EDT49130.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|182675955|gb|EDT87860.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|186700816|gb|EDU19098.1| peptidyl-tRNA hydrolase [Ureaplasma parvum serovar 6 str. ATCC
27818]
Length = 186
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 59/185 (31%), Positives = 99/185 (53%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG Y + RHN+GFM I+ I + KF+ ++ + +P
Sbjct: 4 YLIVGLGNPGSNYAKTRHNVGFMVINEICNKLNLSLDSSKFNGIFTKTIYNNSIVFFCQP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+ +++++NFY +P ++N +VI+DD+D GT++L+ G G NG+K+I
Sbjct: 64 TTYMNLSGEFVIKMLNFYNIP-IKNLIVIYDDVDTKLGTIKLRKKGSSGGQNGIKNIINI 122
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ KR+RIGI + P + ++VL NF E + P I A + +
Sbjct: 123 LKTDEIKRIRIGIDKDPH-IKLDQYVLSNFKIDELVIIKPAIIKGALATLAAIGEDFDKV 181
Query: 181 LNHIV 185
+N
Sbjct: 182 MNKFN 186
>gi|25027567|ref|NP_737621.1| peptidyl-tRNA hydrolase [Corynebacterium efficiens YS-314]
gi|259507026|ref|ZP_05749926.1| aminoacyl-tRNA hydrolase [Corynebacterium efficiens YS-314]
gi|46576823|sp|Q8FQV6|PTH_COREF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|23492849|dbj|BAC17821.1| putative peptidyl-tRNA hydrolase [Corynebacterium efficiens YS-314]
gi|259165304|gb|EEW49858.1| aminoacyl-tRNA hydrolase [Corynebacterium efficiens YS-314]
Length = 177
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 72/172 (41%), Positives = 104/172 (60%), Gaps = 10/172 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHNIGF ++ + ++ K+ + EI+ QL G I+ KP
Sbjct: 7 LVVGLGNPGPKYVGTRHNIGFEVVEELVGRNYANFSVHKRSNTEIA--QLPG--LIVAKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
++FMNLSG + + +F+K+ + N LV+HD+LDLDFG ++L+ GGGD GHNGLKS S
Sbjct: 63 RSFMNLSGTPIRALCDFFKI-SPANVLVVHDELDLDFGQVKLRQGGGDHGHNGLKSTSRS 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G K+Y +L +GIGRPP VL FS E+ + + A + L+
Sbjct: 122 LGTKDYWKLSVGIGRPPGRMDPATFVLKPFSKQEQDSVPIM---AADAADLI 170
>gi|117924130|ref|YP_864747.1| peptidyl-tRNA hydrolase [Magnetococcus sp. MC-1]
gi|117607886|gb|ABK43341.1| peptidyl-tRNA hydrolase [Magnetococcus sp. MC-1]
Length = 239
Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats.
Identities = 69/184 (37%), Positives = 107/184 (58%), Gaps = 3/184 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG +Y E RHN+G+ +D I + PA +F G + G + + P+
Sbjct: 4 LLVGLGNPGEKYRETRHNLGWDAMDAICYTYGLPAPSSRFKGRFGSGVVQGEKLYWLLPE 63
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG+S+ E +Y++ +N +V HDD+DL G +++K GGG GHNGLKSI +
Sbjct: 64 TFMNLSGESVSEAARYYQIEP-KNVIVFHDDMDLALGKIKMKVGGGHGGHNGLKSIQQHL 122
Query: 123 GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPI-IDNIARSLPLLAKREDVSF 180
G ++ R+R+GIGRPP +VL +F+ ER ++P+ + +L L V
Sbjct: 123 GTADFVRVRLGIGRPPAKWDPANYVLSSFTKEERDVVMPVLMALAKAALGALQAGNLVEA 182
Query: 181 LNHI 184
+N +
Sbjct: 183 MNRL 186
>gi|282879283|ref|ZP_06288028.1| aminoacyl-tRNA hydrolase [Prevotella buccalis ATCC 35310]
gi|281298565|gb|EFA90989.1| aminoacyl-tRNA hydrolase [Prevotella buccalis ATCC 35310]
Length = 194
Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 65/188 (34%), Positives = 92/188 (48%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GFM +D ++ K + ++E L G + IL+KP
Sbjct: 4 YLICGLGNPGAEYAGTRHNTGFMVLDAFAKASNI-VFEDKRYGFVAETSLKGRKIILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + LV+ DD+ L G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENIDQ-RRLLVVSDDVALPLGEFRLKGSGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G+NY RLR+GIG + VLG++ + L P ID + +
Sbjct: 122 IGQNYPRLRMGIGNEYPRGGQVDWVLGHYDETDMQVLQPAIDTAVEIIKSFVLAGIDITM 181
Query: 182 NHIVSVRK 189
N K
Sbjct: 182 NQFNQQGK 189
>gi|326336040|ref|ZP_08202216.1| aminoacyl-tRNA hydrolase [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691837|gb|EGD33800.1| aminoacyl-tRNA hydrolase [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 188
Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 66/186 (35%), Positives = 101/186 (54%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGN G EY RHNIGF+ ++ + P + +++ G +L+KP
Sbjct: 4 YLIAGLGNIGEEYRYTRHNIGFLAVEHLAQEKEAPFATARL-GDVATFSHKGRTFVLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG+++ + K+P +EN LVI DDL+L FG++R+K G D GHNG K+I E+
Sbjct: 63 STFMNLSGKAIKYWLEKEKIP-IENLLVIADDLNLPFGSIRIKKKGSDGGHNGFKNIQEE 121
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y RLR GI D I +VLG +S E L ++ I+ ++ +
Sbjct: 122 LRTTVYARLRFGISANYDKGTQIDYVLGRWSEEEVAQLPERLEKISEAILSFGLAGADTT 181
Query: 181 LNHIVS 186
+N +
Sbjct: 182 MNLYNN 187
>gi|332180359|gb|AEE16047.1| Peptidyl-tRNA hydrolase [Treponema brennaborense DSM 12168]
Length = 261
Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 70/188 (37%), Positives = 98/188 (52%), Gaps = 5/188 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQ-LDGLRTILIKP 61
+VA LGN G EY RHN+ + D + F W++KF + L R +KP
Sbjct: 74 LVAFLGNYGREYERTRHNVAWQFADSL-PFADTLNWQRKFKGLYAAADDLGPERVYFLKP 132
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+T+MNLSG+S+ E+ F+K+ E L++HD+L+L GT+ LK GG GHNGL+S
Sbjct: 133 ETYMNLSGESVGELARFFKITP-ERILLVHDELELPPGTVSLKWSGGLGGHNGLRSAKAV 191
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ R R GIGRP D A + +VL F++ ER L I A L K E
Sbjct: 192 LGTADFWRFRFGIGRP-DHADVAGYVLSEFTADERIILSQIFPQSAAMLAQALKAEPQKL 250
Query: 181 LNHIVSVR 188
L +
Sbjct: 251 LPEWNKKK 258
>gi|94676649|ref|YP_588743.1| peptidyl-tRNA hydrolase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|119390913|sp|Q1LTH1|PTH_BAUCH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|94219799|gb|ABF13958.1| peptidyl-tRNA hydrolase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 193
Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 57/191 (29%), Positives = 94/191 (49%), Gaps = 4/191 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG++Y RHN+G ++++ + +H K F + R L+
Sbjct: 4 KLIVGLANPGNKYLLTRHNVGSWYVNQLANNYHVSLINKSSFLGYTGYLNIGKRRIFLLI 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P FMN +GQ++ + FY + E L+ HD+L+ G R K GG GHNGLK +
Sbjct: 64 PTIFMNYNGQAVAAIAKFYNIMP-EEILIAHDELNFLPGYARFKYSGGHGGHNGLKDVIY 122
Query: 121 KCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G N+ RLRIGIG P D +I+ VL E+ + I+ L+ ++
Sbjct: 123 RLGDNNNFYRLRIGIGHPGDKNKVIKFVLDTPLDTEQQLIQHAINESVLCTSLMFQQNIA 182
Query: 179 SFLNHIVSVRK 189
++ + ++ K
Sbjct: 183 YAIHQLHTILK 193
>gi|294506807|ref|YP_003570865.1| peptidyl-tRNA hydrolase [Salinibacter ruber M8]
gi|294343135|emb|CBH23913.1| Peptidyl-tRNA hydrolase [Salinibacter ruber M8]
Length = 188
Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG EY + RHN+G ID + + + A + G+ + L P
Sbjct: 6 LLAIGLGNPGAEYEDTRHNVGHQVIDGLSGRLDISL-QHQSDALVGWGRYVDQKIGLAVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG ++ + Y LP ++ LVI DDL L GT+RL+ G GHNGL ++++
Sbjct: 65 LTYMNRSGDAVAGLRAHYDLP-IDRLLVIVDDLHLPVGTIRLRPTGSSGGHNGLAHVAQR 123
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ RLR+GIG +VL F+ +R ++ ++ +A+ + +
Sbjct: 124 LGTTDFSRLRVGIGNDFPEGRQSDYVLSPFTDEQRPAARSAREDAEDAVLTMARDDIDAA 183
Query: 181 LNHIV 185
+N
Sbjct: 184 MNRFN 188
>gi|139439413|ref|ZP_01772854.1| Hypothetical protein COLAER_01874 [Collinsella aerofaciens ATCC
25986]
gi|133775192|gb|EBA39012.1| Hypothetical protein COLAER_01874 [Collinsella aerofaciens ATCC
25986]
Length = 209
Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats.
Identities = 66/168 (39%), Positives = 95/168 (56%), Gaps = 9/168 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG-------LR 55
+VAGLGNPG EY E RHN GF ID + WK + AE++ ++ +
Sbjct: 11 MVAGLGNPGEEYAETRHNAGFKAIDELARQAGVTYWKNQAGAEVALININDPEEEGGKRQ 70
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L+KPQ++MN SG + ++ YK+ E LVIHD+LD+ G +R+K GGG AGHNGL
Sbjct: 71 IVLVKPQSYMNTSGGPISKLCREYKIK-AEELLVIHDELDIPAGDVRVKVGGGHAGHNGL 129
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
+SI +K G +++ R+R GIG PP + +VL + E
Sbjct: 130 RSIIDKMGSRDFSRIRTGIGNPPGKMAVADYVLKQLRAREAEDFQDTC 177
>gi|110004198|emb|CAK98536.1| probable peptidyl-trna hydrolase protein [Spiroplasma citri]
Length = 189
Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats.
Identities = 65/167 (38%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG+EY RHNIGF+ I ++ K F+A I E ++ + + +
Sbjct: 1 MKLIVGLGNPGNEYTYTRHNIGFLAIAKLVDKFDLAKPKNAFNALIWETTINNEKVLFCQ 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG ++ ++ FYKL E+ +VI+DD D+ F ++LK G AGHNG+K + +
Sbjct: 61 PQTFMNLSGTAVYQIKQFYKLI-WEDIIVIYDDKDIPFNVIKLKKNGSSAGHNGIKDLIQ 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL-LPIIDNI 165
K G +N+ R+RIGIG+ VLGNFS + + +++ +
Sbjct: 120 KLGSENFLRIRIGIGKDFQ-IPTRNWVLGNFSPAQLEIINNDLLERV 165
>gi|313772664|gb|EFS38630.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL074PA1]
gi|313810887|gb|EFS48601.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL083PA1]
gi|313832006|gb|EFS69720.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL007PA1]
gi|313834454|gb|EFS72168.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL056PA1]
gi|314974456|gb|EFT18551.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL053PA1]
gi|314977354|gb|EFT21449.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL045PA1]
gi|314985547|gb|EFT29639.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL005PA1]
gi|315097620|gb|EFT69596.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL038PA1]
gi|327331621|gb|EGE73360.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes HL096PA2]
gi|327446982|gb|EGE93636.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL043PA1]
gi|327449981|gb|EGE96635.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL043PA2]
gi|328761612|gb|EGF75128.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes HL099PA1]
Length = 200
Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDG------- 53
++V GLGNPG Y RHN+G I + + + AE+ +L
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 54 ---LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
IL++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LRLK GGGD
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGITP-DHLIVVHDEIDLDPGRLRLKKGGGDY 123
Query: 111 GHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
GHNGLKSI ++ R+R+G+GRPP VL + +R + + A ++
Sbjct: 124 GHNGLKSIRAHLRTGDFIRVRLGVGRPPGHQDPADWVLARVPARQRAEMGVQVALAADAV 183
Query: 170 PLLAKREDVSFLNHIVS 186
+ + + N S
Sbjct: 184 ESIIIQGLAAAQNRFNS 200
>gi|314969388|gb|EFT13486.1| peptidyl-tRNA hydrolase [Propionibacterium acnes HL037PA1]
Length = 200
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDG------- 53
++V GLGNPG Y RHN+G I + + + AE+ +L
Sbjct: 5 WLVIGLGNPGPRYDGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 54 ---LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
IL++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LRLK GGGD
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGITR-DHLIVVHDEIDLDPGRLRLKKGGGDN 123
Query: 111 GHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
GHNGLKSI ++ R+R+G+GRPP VL + +R + + A ++
Sbjct: 124 GHNGLKSIRAHLRTGDFIRVRLGVGRPPGHQDPADWVLARVPARQRAEMGVQVALAADAV 183
Query: 170 PLLAKREDVSFLNHIVS 186
+ + + N S
Sbjct: 184 ESIIIQGLAAAQNRFNS 200
>gi|19552161|ref|NP_600163.1| peptidyl-tRNA hydrolase [Corynebacterium glutamicum ATCC 13032]
gi|45477195|sp|Q8NRV6|PTH2_CORGL RecName: Full=Peptidyl-tRNA hydrolase 2; Short=PTH 2
gi|21323701|dbj|BAB98328.1| Peptidyl-tRNA hydrolase [Corynebacterium glutamicum ATCC 13032]
Length = 204
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG +Y RHN+G+MC D + H + QL + ++
Sbjct: 25 WLVVGLGNPGAKYESTRHNVGYMCQDMLIDAHQQQPLTPATGYKALTTQLA-PGVLAVRS 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ + + +P E +VIHD+LDL G +RLK GG + GHNGLKS++E+
Sbjct: 84 TTFMNHSGQGVAPIAAALGIP-AERIIVIHDELDLPAGKVRLKKGGNENGHNGLKSLTEE 142
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y R+RIGI RPP + +VL + P I+ A ++ LL + +
Sbjct: 143 LGTRDYLRVRIGISRPPAGMAVPDYVLEPVDHDQ-----PGIELAAEAVDLLLAQGLSAA 197
Query: 181 LNHIVS 186
N I S
Sbjct: 198 QNAIHS 203
>gi|302060385|ref|ZP_07251926.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. tomato K40]
Length = 173
Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats.
Identities = 64/166 (38%), Positives = 90/166 (54%), Gaps = 4/166 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN G ++RI + ++KF G L+ P
Sbjct: 6 LIVGLGNPGAEYEQTRHNAGAFFVERIAAAQRVNLVPERKFFGLTGRFTHQGQDVRLLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I +
Sbjct: 66 TTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQ 124
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
G + RLR+GIG P D + + VLG E+ L ID
Sbjct: 125 LGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFA 170
>gi|288928359|ref|ZP_06422206.1| aminoacyl-tRNA hydrolase [Prevotella sp. oral taxon 317 str. F0108]
gi|288331193|gb|EFC69777.1| aminoacyl-tRNA hydrolase [Prevotella sp. oral taxon 317 str. F0108]
Length = 189
Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats.
Identities = 66/184 (35%), Positives = 93/184 (50%), Gaps = 2/184 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GFM +D ++ K + +S + G + +L+KP
Sbjct: 4 YLIVGLGNPGREYEATRHNTGFMILDAFAKASNI-VFEDKRYGFVSSAMVKGRKLVLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ ++ +P E+ LV+ DDL L GTLRLK G + GHNGL I +
Sbjct: 63 STFMNLSGNAVRYWLDKENIPQ-EHLLVVVDDLALPLGTLRLKGNGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G Y RLR+GIG + VLG + E L P I+ + A +
Sbjct: 122 IGPQYARLRVGIGNEFPRGGQVDWVLGEYDDEELKALEPAIERSIEIIKSFALAGITVTM 181
Query: 182 NHIV 185
N
Sbjct: 182 NQFN 185
>gi|257094306|ref|YP_003167947.1| peptidyl-tRNA hydrolase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257046830|gb|ACV36018.1| Aminoacyl-tRNA hydrolase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 191
Score = 197 bits (503), Expect = 4e-49, Method: Composition-based stats.
Identities = 69/185 (37%), Positives = 102/185 (55%), Gaps = 7/185 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY +NRHN+GF ID++ P + KF ++ L++P
Sbjct: 6 LIVGLGNPGGEYEDNRHNVGFWFIDQLAQRLRAPLAPQGKFLGRVARV----GELWLLQP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSGQ++ + FYK+ + LV+HDDLDL GT RLK GGG+ GHNGLK I +
Sbjct: 62 MTYMNLSGQAVAALARFYKI-GADETLVVHDDLDLPPGTTRLKLGGGNGGHNGLKDIQAR 120
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
++ RLR+GIG P + ++ +VL E+ + ID + P LA + +
Sbjct: 121 LATPDFWRLRLGIGHPGERDAVVGYVLKAPRREEQELIDRAIDRCLLAWPDLAAGDYAAA 180
Query: 181 LNHIV 185
+
Sbjct: 181 QRLLH 185
>gi|298345581|ref|YP_003718268.1| aminoacyl-tRNA hydrolase [Mobiluncus curtisii ATCC 43063]
gi|304391136|ref|ZP_07373088.1| aminoacyl-tRNA hydrolase [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|298235642|gb|ADI66774.1| aminoacyl-tRNA hydrolase [Mobiluncus curtisii ATCC 43063]
gi|304326019|gb|EFL93265.1| aminoacyl-tRNA hydrolase [Mobiluncus curtisii subsp. curtisii ATCC
35241]
Length = 222
Score = 197 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 15/198 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQL----D 52
++V GLGNPG +Y RHN G+M D ++ + A ++ L D
Sbjct: 21 WLVVGLGNPGDKYAGTRHNCGYMVTDCFVKQSGQAYRNQSLARAGVVARVATVSLGYGVD 80
Query: 53 GLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGH 112
+ I+ ++MN SG + E++++Y+L + + LV+HD+LDL+ G +LK GG D GH
Sbjct: 81 APKIIVAHTGSYMNESGPGVKELLDYYRLGS-DRLLVVHDELDLEMGYAKLKVGGSDGGH 139
Query: 113 NGLKSISEKCG-KNYKRLRIGIGR----PPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
NGLKSI + G K++ RLRIGIGR P +I VLG ++ L ++D +
Sbjct: 140 NGLKSIQKALGTKDFARLRIGIGRPVKMPGGGFDVINWVLGRIPKSQQSILDEVLDRAVQ 199
Query: 168 SLPLLAKREDVSFLNHIV 185
+ +A+ +
Sbjct: 200 CVTDIAENGLAKAQARLH 217
>gi|315656086|ref|ZP_07908977.1| aminoacyl-tRNA hydrolase [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|315493088|gb|EFU82688.1| aminoacyl-tRNA hydrolase [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 222
Score = 197 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 15/198 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-----HSFHFFPAWKKKFHAEISEGQL----D 52
++V GLGNPG +Y RHN G+M D ++ + A ++ L D
Sbjct: 21 WLVVGLGNPGDKYAGTRHNCGYMVTDCFVKQSGQAYRNQSLARAGVVARVATVSLGYGVD 80
Query: 53 GLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGH 112
+ I+ ++MN SG + E++++Y+L + + LV+HD+LDL+ G +LK GG D GH
Sbjct: 81 APKIIVAHTGSYMNESGPGVKELLDYYRLGS-DRLLVVHDELDLEMGYAKLKVGGSDGGH 139
Query: 113 NGLKSISEKCG-KNYKRLRIGIGR----PPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
NGLKSI + G K++ RLRIGIGR P +I VLG ++ L ++D +
Sbjct: 140 NGLKSIQKALGTKDFARLRIGIGRPVKMPGGGFDVINWVLGRIPKSQQSILDEVLDRAVQ 199
Query: 168 SLPLLAKREDVSFLNHIV 185
+ +A+ +
Sbjct: 200 CVTDIAENGLAKAQARLH 217
>gi|300781624|ref|ZP_07091478.1| aminoacyl-tRNA hydrolase [Corynebacterium genitalium ATCC 33030]
gi|300533331|gb|EFK54392.1| aminoacyl-tRNA hydrolase [Corynebacterium genitalium ATCC 33030]
Length = 188
Score = 197 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 100/175 (57%), Gaps = 9/175 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH----FFPAWKKKFHAEISE---GQLDGLR 55
+V GLGNPG Y + RHN G M ID + + KK + E++E G+L R
Sbjct: 8 LVVGLGNPGTIYAQTRHNAGAMVIDELLDRATPMPAQLSVHKKTNTEVAELAAGRLMPRR 67
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
TIL + + FMN+SG + + ++Y + VI+D+LDLDFG +L+ GGGD GHNGL
Sbjct: 68 TILARTRGFMNVSGGPVKALASYYGTKPA-DIHVIYDELDLDFGQFKLRLGGGDHGHNGL 126
Query: 116 KSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
KS+++ G +Y RL +GIGRPP +VL FS E L ++ ++A L
Sbjct: 127 KSVTKSLGTSDYHRLAVGIGRPPGRQAPADYVLKPFSKQEFAELPIVLADVADGL 181
>gi|327335129|gb|EGE76840.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes HL097PA1]
Length = 200
Score = 197 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 13/197 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDG------- 53
++V GLGNPG Y RHN+G I + + + AE+ +L
Sbjct: 5 WLVIGLGNPGPRYAGTRHNVGADVIAELCRRAGEKLSPARGQRAELVRTRLSSAGLGVPA 64
Query: 54 ---LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
IL++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LRLK GGGD
Sbjct: 65 VDAQTVILMRSRTYMNESGIAVSKVASFAGITP-DHLIVVHDEIDLDPGRLRLKKGGGDN 123
Query: 111 GHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
GHNGLKSI ++ R+R+G+GR P VL + +R + + A ++
Sbjct: 124 GHNGLKSIRAHLRTGDFIRVRLGVGRSPGHQDPADWVLARVPARQRAEMGVQVALAADAV 183
Query: 170 PLLAKREDVSFLNHIVS 186
+ + + N S
Sbjct: 184 ESIIIQGLAAAQNRFNS 200
>gi|227487911|ref|ZP_03918227.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227542551|ref|ZP_03972600.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51866]
gi|227092117|gb|EEI27429.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227181749|gb|EEI62721.1| peptidyl-tRNA hydrolase [Corynebacterium glucuronolyticum ATCC
51866]
Length = 187
Score = 197 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 69/181 (38%), Positives = 100/181 (55%), Gaps = 9/181 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-----FFPAWK--KKFHAEISEGQLDGL 54
F+V GLGNPG Y RHNIGF+ D + WK K A ++E G
Sbjct: 5 FLVVGLGNPGATYELTRHNIGFLAADEVADALAPVYVGGSNWKVVSKMRAVLAEESRGGA 64
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
+ ++ KPQT MNLSG+++ + FY +P +VIHD+L+ DFG++ K GGG GHNG
Sbjct: 65 KVLVAKPQTMMNLSGEAVGLISRFYSIPP-SRVIVIHDELERDFGSVETKIGGGFGGHNG 123
Query: 115 LKSISEKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
LKSI++ ++ R+R+GIGRPP +VL FS+ E+ L I ++ ++
Sbjct: 124 LKSIAQHLKTPDFARVRVGIGRPPGRMRPADYVLQKFSAKEQTELPFICADVEDAVSRWL 183
Query: 174 K 174
Sbjct: 184 T 184
>gi|307566360|ref|ZP_07628799.1| putative peptidyl-tRNA hydrolase [Prevotella amnii CRIS 21A-A]
gi|307344937|gb|EFN90335.1| putative peptidyl-tRNA hydrolase [Prevotella amnii CRIS 21A-A]
Length = 190
Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats.
Identities = 67/188 (35%), Positives = 97/188 (51%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG+EY RHN GFM +D + ++ K + I+E L G + IL+KP
Sbjct: 4 YLICGLGNPGNEYEGTRHNTGFMVLDALAKASNA-VFEDKRYGFIAEFTLKGRKIILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + LVI DD+ L G RLK G + GHNGL +I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENIDQ-SRLLVISDDIALPLGAFRLKGSGSNGGHNGLGNIEQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
GK+Y RLR+GIG + VLG++S + L P I+ + +
Sbjct: 122 IGKDYPRLRMGIGNDYAKGKQVDWVLGHYSEEDMKILQPSINLAEDIIKSFVLSGLGFTM 181
Query: 182 NHIVSVRK 189
N + K
Sbjct: 182 NEYNKLGK 189
>gi|260912294|ref|ZP_05918845.1| aminoacyl-tRNA hydrolase [Prevotella sp. oral taxon 472 str. F0295]
gi|260633595|gb|EEX51734.1| aminoacyl-tRNA hydrolase [Prevotella sp. oral taxon 472 str. F0295]
Length = 189
Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats.
Identities = 64/184 (34%), Positives = 91/184 (49%), Gaps = 2/184 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY RHN GFM +D ++ K + ++ + G + L+KP
Sbjct: 4 YLIVGLGNPGREYEATRHNTGFMILDAFAKASNI-VFEDKRYGFVTSTMVKGRKLFLLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ ++ +P E+ LV+ DDL L G LRLK G + GHNGL I +
Sbjct: 63 STFMNLSGNAVRYWLDKENIPQ-EHLLVVVDDLALPLGALRLKGNGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G Y RLR+GIG + VLG + E L P I+ + A +
Sbjct: 122 IGPQYARLRVGIGNEFPRGGQVDWVLGEYDEEELKTLQPAIEQSIEIIKSFALAGITVTM 181
Query: 182 NHIV 185
N
Sbjct: 182 NQFN 185
>gi|62389825|ref|YP_225227.1| peptidyl-tRNA hydrolase [Corynebacterium glutamicum ATCC 13032]
gi|41325160|emb|CAF19641.1| PEPTIDYL-TRNA HYDROLASE [Corynebacterium glutamicum ATCC 13032]
Length = 201
Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG +Y RHN+G+MC D + H + QL + ++
Sbjct: 22 WLVVGLGNPGAKYESTRHNVGYMCQDMLIDAHQQQPLTPATGYKALTTQLA-PGVLAVRS 80
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SGQ + + +P E +VIHD+LDL G +RLK GG + GHNGLKS++E+
Sbjct: 81 TTFMNHSGQGVAPIAAALGIP-AERIIVIHDELDLPAGKVRLKKGGNENGHNGLKSLTEE 139
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y R+RIGI RPP + +VL + P I+ A ++ LL + +
Sbjct: 140 LGTRDYLRVRIGISRPPAGMAVPDYVLEPVDHDQ-----PGIELAAEAVDLLLAQGLSAA 194
Query: 181 LNHIVS 186
N I S
Sbjct: 195 QNAIHS 200
>gi|83815615|ref|YP_444949.1| peptidyl-tRNA hydrolase [Salinibacter ruber DSM 13855]
gi|119391001|sp|Q2S4D2|PTH_SALRD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|83757009|gb|ABC45122.1| peptidyl-tRNA hydrolase [Salinibacter ruber DSM 13855]
Length = 188
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG EY + RHN+G ID + + + A + G+ + L P
Sbjct: 6 LLAIGLGNPGAEYEDTRHNVGHQVIDGLSGRLDISL-QHQSDALVGWGRYVDQKIGLAVP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG ++ + Y LP ++ LVI DDL L GT+RL+ G GHNGL ++++
Sbjct: 65 LTYMNRSGDAVAGLRAHYDLP-IDRLLVIVDDLHLPVGTIRLRPTGSSGGHNGLAHVAQR 123
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + RLR+GIG +VL F+ +R ++ ++ +A+ + +
Sbjct: 124 LGTTEFSRLRVGIGNDFPEGRQSDYVLSPFTDEQRPAARSAREDAEDAVLTMARDDIDAA 183
Query: 181 LNHIV 185
+N
Sbjct: 184 MNRFN 188
>gi|116626136|ref|YP_828292.1| peptidyl-tRNA hydrolase [Candidatus Solibacter usitatus Ellin6076]
gi|122251816|sp|Q01QR3|PTH_SOLUE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116229298|gb|ABJ88007.1| peptidyl-tRNA hydrolase [Candidatus Solibacter usitatus Ellin6076]
Length = 196
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 64/188 (34%), Positives = 101/188 (53%), Gaps = 6/188 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++AGLGNPG +Y + HN+GF+ +DR+ +K A I G++DG + +L K
Sbjct: 1 MFLLAGLGNPGEQYALSPHNLGFLVVDRLAEQFGIRVTRKDSKALIGLGEIDGHQVMLAK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+SL +M +++ + N +VI+D+LDL +G L++K G AGHNG+KS+ +
Sbjct: 61 PQTFMNLSGESLAPLMEKHQI-EISNLVVIYDELDLPWGALKIKPKGSAAGHNGMKSVIQ 119
Query: 121 KC-GKNYKRLRIGI--GRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
R+R+GI G P + VL + L + A ++ +
Sbjct: 120 WFKTSEIVRVRLGIHPGHPIRSG--AEFVLAPIKRSQMKELDEFVGFAADAVRTITAEGV 177
Query: 178 VSFLNHIV 185
+
Sbjct: 178 EKAMTKFN 185
>gi|297243628|ref|ZP_06927559.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis AMD]
gi|296888379|gb|EFH27120.1| peptidyl-tRNA hydrolase [Gardnerella vaginalis AMD]
Length = 199
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 61/181 (33%), Positives = 101/181 (55%), Gaps = 10/181 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG--QLDGL--RTI 57
+++AGLGNPG +Y RHN+GFM D + K A++ +G LDG +
Sbjct: 6 WLIAGLGNPGTKYEGTRHNMGFMVADVLAQRWSVSLSDHKGLAKLGKGVMNLDGRVAKFF 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP TFMN SG ++ + ++Y++ ++ ++IHDD+DLDFG +++K GG GHNG++S
Sbjct: 66 LAKPLTFMNDSGAAVSSISSYYQIEP-DHIVIIHDDMDLDFGRIKVKAGGSAGGHNGIRS 124
Query: 118 ISEKCGK-NYKRLRIGIGRPPDT----AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I G Y R+R+G+G + + VLG F++ ++ L + + A + +
Sbjct: 125 IDRSLGTPQYSRVRMGVGHAQRGAHAHDNTVNWVLGGFAAVQKSDLPNFLADGADAAESI 184
Query: 173 A 173
Sbjct: 185 I 185
>gi|123967809|ref|YP_001008667.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. AS9601]
gi|166229436|sp|A2BP49|PTH_PROMS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|123197919|gb|ABM69560.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. AS9601]
Length = 200
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 110/195 (56%), Gaps = 9/195 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+++ GLGNPG +Y +RHNIGF+ ++ + K K + SE Q++ L
Sbjct: 5 YLI-GLGNPGKKYFNSRHNIGFLLLESFSKKYNSNFLLKDKLKSSCSEFQINNSTFKLFL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++++YK+ NL+ L+I DD DL G +R + G GHNGLKSI E
Sbjct: 64 PNTFMNNSGDAVRAIVDWYKI-NLDQILIIVDDKDLPLGKIRFRRKGSSGGHNGLKSIIE 122
Query: 121 KC-GKNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ +N+KR+RIGIG PP + + I HVLGN S E+ L + + SL +
Sbjct: 123 QLQTQNFKRIRIGIGSPPITNGKNHFNTISHVLGNISLDEKSILDKVYSRVIESLEQINT 182
Query: 175 REDVSFLNHIVSVRK 189
+++ +N + S K
Sbjct: 183 KKEEYIINELNSFDK 197
>gi|315636067|ref|ZP_07891324.1| aminoacyl-tRNA hydrolase [Arcobacter butzleri JV22]
gi|315479636|gb|EFU70312.1| aminoacyl-tRNA hydrolase [Arcobacter butzleri JV22]
Length = 183
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 68/180 (37%), Positives = 101/180 (56%), Gaps = 6/180 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M+++ GLGN G +Y RHN+GF+ +D + F + + L ++
Sbjct: 1 MYLIVGLGNIGEKYQYTRHNVGFLVVDEMTKNLQTSNVNNSNFQSTL----LKSGYSLFA 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG ++ + +YK+ +LEN +VIHDDLDL FGT++ K GGG GHNGLKS+
Sbjct: 57 KPTTYMNNSGVAVHSIKEYYKI-DLENIIVIHDDLDLPFGTVKFKIGGGHGGHNGLKSLD 115
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
GK+Y R+RIGIG+P + + VL +FS E L II + ++ L +
Sbjct: 116 SHIGKDYIRVRIGIGKPQNKDDVANFVLSDFSKEELNKLEDIIKHTINAIEALKTADIDE 175
>gi|313680823|ref|YP_004058562.1| peptidyl-tRNA hydrolase [Oceanithermus profundus DSM 14977]
gi|313153538|gb|ADR37389.1| peptidyl-tRNA hydrolase [Oceanithermus profundus DSM 14977]
Length = 219
Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 68/155 (43%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F+V GLGNPG Y E RHN+GF +DRI AWK++ A + L+KP
Sbjct: 32 FLVVGLGNPGPRYAETRHNLGFWVVDRIAREER-LAWKQQGRAFTTRWGSG----WLMKP 86
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ + +YK+ E LV+HDD+DL G LRL+ GG G G++SI E+
Sbjct: 87 TTFMNASGEAVAPFVRYYKIAP-ERLLVVHDDMDLPLGRLRLRRGGSAGGQKGVRSIIEQ 145
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
G + + RLR+GIGRPP VL FS ER
Sbjct: 146 LGTDRFDRLRLGIGRPPAGWDAASWVLSKFSPDER 180
>gi|116490295|ref|YP_809839.1| peptidyl-tRNA hydrolase [Oenococcus oeni PSU-1]
gi|116091020|gb|ABJ56174.1| peptidyl-tRNA hydrolase [Oenococcus oeni PSU-1]
Length = 190
Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats.
Identities = 67/188 (35%), Positives = 106/188 (56%), Gaps = 7/188 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
IV GLGN G +Y NRHN+GFM +D + + + K+ HA ++ ++ + L+K
Sbjct: 3 KIVVGLGNIGAKYAHNRHNVGFMAVDELAARLQANFSLKQNLHAFVASTHIEEEKVYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MN SG ++ V+N++ ++ + +V DD+D D+G LR+K G GHNGLKSI
Sbjct: 63 PTTMMNDSGIAVKAVLNYFG-GDVNDLIVFVDDIDRDYGQLRIKKSGASGGHNGLKSIVS 121
Query: 121 KC-GKNYKRLRIGIGRPPD-TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ + + R+RIG GRP +I+HVLG+FS + + P IDN + +
Sbjct: 122 QIASQEFLRIRIGTGRPAHNPQAVIKHVLGDFSPLQLELVQPEIDNGVSAALDIING--- 178
Query: 179 SFLNHIVS 186
+ LN + +
Sbjct: 179 TALNVVTN 186
>gi|167627809|ref|YP_001678309.1| peptidyl-tRNA hydrolase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189038291|sp|B0TZF5|PTH_FRAP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|167597810|gb|ABZ87808.1| Aminoacyl-tRNA hydrolase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 191
Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGN G EY RHN+G I +I + + K + I++ ++ IL+
Sbjct: 5 KMIVGLGNIGKEYENTRHNVGEWFIAKIAKDNNENFSLNSKLNCNIAKVNINYNNIILVF 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +V NFYK+ E LV+HD+LD+D G +RLK GGG GHNGL+SI +
Sbjct: 65 PTTFMNNSGLAVSKVANFYKIEP-EEILVVHDELDIDSGEIRLKKGGGHGGHNGLRSIHQ 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y RLRIGIG P + + +VL N S ++ + IDN L + +
Sbjct: 124 HLGTNDYLRLRIGIGHPGHKSKVSNYVLSNPSVAQKNDIDNAIDNGICVLDDIINYKLEP 183
Query: 180 FLNHIVS 186
+ + +
Sbjct: 184 AMQRLHT 190
>gi|221195080|ref|ZP_03568136.1| peptidyl-tRNA hydrolase [Atopobium rimae ATCC 49626]
gi|221184983|gb|EEE17374.1| peptidyl-tRNA hydrolase [Atopobium rimae ATCC 49626]
Length = 222
Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats.
Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 7/184 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG-----LRTI 57
++ GLGNPG +Y RHNIGF ID + + WK + ++ + +
Sbjct: 29 LICGLGNPGEKYAHTRHNIGFAVIDALARRYDVRYWKSEAGCLVTTIIVTDADAQRQEVL 88
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KPQ FMN SG L ++ ++ + N LV+HD++DL G++R + GGG HNGL+S
Sbjct: 89 LAKPQDFMNTSGGPLSKLAQARRI-SPANILVVHDEVDLAAGSIRTRAGGGLNAHNGLRS 147
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
I++K G +++ RL+ GIGRPP ++ +VL L ++ A + L K
Sbjct: 148 IADKFGTRDFMRLQCGIGRPPGRMKVVDYVLKELKGTALEEFLVTVEVAADEVEKLLKTS 207
Query: 177 DVSF 180
+
Sbjct: 208 TQAA 211
>gi|126695611|ref|YP_001090497.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9301]
gi|166229432|sp|A3PAX1|PTH_PROM0 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|126542654|gb|ABO16896.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9301]
Length = 198
Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 111/195 (56%), Gaps = 9/195 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIK 60
+++ GLGNPG +Y +RHNIGF+ ++++ + K K + SE Q++ L
Sbjct: 5 YLI-GLGNPGKKYYNSRHNIGFLLLEKLSKKYNSNFLLKDKLKSSCSEFQINNYTFRLFL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++++YK+ NL+ +I DD DL G +R + G GHNGLKSI E
Sbjct: 64 PNTFMNNSGYAVRAIVDWYKV-NLDQIFIIVDDKDLPLGKIRFRRKGSSGGHNGLKSIIE 122
Query: 121 KC-GKNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ +N+KR+RIGIG PP + + I HVLGN S E+ L + + SL L
Sbjct: 123 QLQSQNFKRIRIGIGSPPLIKGENNFNTISHVLGNISLEEKLILDKVFKRVIESLEHLNT 182
Query: 175 REDVSFLNHIVSVRK 189
+++ +N + S +
Sbjct: 183 KKEDHIINELNSFNQ 197
>gi|302345748|ref|YP_003814101.1| aminoacyl-tRNA hydrolase [Prevotella melaninogenica ATCC 25845]
gi|302149840|gb|ADK96102.1| aminoacyl-tRNA hydrolase [Prevotella melaninogenica ATCC 25845]
Length = 190
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 66/188 (35%), Positives = 95/188 (50%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG+EY RHN GFM +D ++ K + ++E + G + IL+KP
Sbjct: 4 YLICGLGNPGYEYEGTRHNTGFMVLDAFAKASNI-VFEDKRYGFVAETTVKGRKIILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + LV+ DD+ L G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENIDQ-SRLLVVSDDVALPLGAFRLKGNGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G+NY RLR+G+G + VLG +S E L P ID + A +
Sbjct: 122 IGQNYARLRMGVGNDYPRGGQVDWVLGRYSDEEMKELQPAIDLGVDIIKSFALAGLDITM 181
Query: 182 NHIVSVRK 189
N + K
Sbjct: 182 NQFNKLGK 189
>gi|332178236|gb|AEE13925.1| Peptidyl-tRNA hydrolase [Thermodesulfobium narugense DSM 14796]
Length = 192
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 68/189 (35%), Positives = 102/189 (53%), Gaps = 12/189 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++++ GLGN G EY RHN+GF+ +D + F KF ++ I +K
Sbjct: 12 LYLIVGLGNIGKEYALTRHNVGFLFLDFLSENLGF-----KFSGFEAKIN----SLIFLK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ V +FYK+ + +N +VI+DDLDLDF T+R + G AGH G++SI E
Sbjct: 63 PDTYMNRSGIAVKRVSDFYKIAH-KNIIVIYDDLDLDFKTIRFRPKGSSAGHKGMESIIE 121
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G R++IGIGR D VL NF E +L I ++ A L + +R +
Sbjct: 122 ELGTQLIPRIKIGIGR-KDGVKPKDWVLSNFDDAELSYLPKIFESAAMCLEIFLERGENE 180
Query: 180 FLNHIVSVR 188
L V+
Sbjct: 181 ALMKCGKVK 189
>gi|256828486|ref|YP_003157214.1| peptidyl-tRNA hydrolase [Desulfomicrobium baculatum DSM 4028]
gi|256577662|gb|ACU88798.1| peptidyl-tRNA hydrolase [Desulfomicrobium baculatum DSM 4028]
Length = 198
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 10/193 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK------KFHAEISEGQ--LDGL 54
++ GLGNPG +Y RHN GFM D + + +A++ +
Sbjct: 6 LIVGLGNPGTKYARTRHNFGFMLADHLLEHWAGQPGTACTARSGRLNAQLWDVSEDYGAR 65
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R I+ KP TFMNLSGQ + E+ ++P + LV HD+LDL GT+RLK GG AGHNG
Sbjct: 66 RWIVAKPLTFMNLSGQVVGELSRKNEIP-ADRILVAHDELDLALGTVRLKFSGGLAGHNG 124
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
LKS++ G +++ R+R+GIGRP + + +VL +F E + + ++
Sbjct: 125 LKSVAAHLGTRDFARIRLGIGRPEGSEAMADYVLRSFMPAEWEQVAQALGIARDAVLHYC 184
Query: 174 KREDVSFLNHIVS 186
+ + + S
Sbjct: 185 SEGLTAATSRLHS 197
>gi|213582444|ref|ZP_03364270.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 175
Score = 196 bits (500), Expect = 9e-49, Method: Composition-based stats.
Identities = 62/174 (35%), Positives = 88/174 (50%), Gaps = 4/174 (2%)
Query: 18 RHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVM 76
RHN G +D + P ++ KF S L+G L+ P TFMNLSG+++ +
Sbjct: 1 RHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMA 60
Query: 77 NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN--YKRLRIGIG 134
+FY++ + LV HD+LDL G + K GGG GHNGLK I K G N + RLR+GIG
Sbjct: 61 SFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIG 119
Query: 135 RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVSVR 188
P D ++ VLG E+ + ID AR L K + + + +
Sbjct: 120 HPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLAKATSRLHTFK 173
>gi|269958305|ref|YP_003328092.1| peptidyl-tRNA hydrolase [Anaplasma centrale str. Israel]
gi|269848134|gb|ACZ48778.1| peptidyl-tRNA hydrolase [Anaplasma centrale str. Israel]
Length = 186
Score = 196 bits (500), Expect = 9e-49, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 106/184 (57%), Gaps = 4/184 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF+ D + FP + K+ A +S G + R +++K
Sbjct: 1 MLLLVGLGNPGKQYEFTRHNVGFVVADTVARDFNFPEFSSKYDALVSVGNVGLHRAMIVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++L+ + +K+P E V HDD DL G +++K GGG+AGHNGL+SI
Sbjct: 61 PATFMNRSGAAVLKAASMHKIP-AEQITVFHDDADLQHGVVKVKQGGGNAGHNGLRSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y R+R+G+GRP D + HVL +F + + + I+ +L L F
Sbjct: 120 AIGCQYWRVRLGVGRP-DAGSLSGHVLSDFH--DFDSVQQLAHKISANLTELLDGNVNGF 176
Query: 181 LNHI 184
++ I
Sbjct: 177 ISKI 180
>gi|315656037|ref|ZP_07908935.1| aminoacyl-tRNA hydrolase [Mobiluncus curtisii ATCC 51333]
gi|315490101|gb|EFU79728.1| aminoacyl-tRNA hydrolase [Mobiluncus curtisii ATCC 51333]
Length = 222
Score = 196 bits (500), Expect = 9e-49, Method: Composition-based stats.
Identities = 65/198 (32%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS-----FHFFPAWKKKFHAEISEGQL----D 52
++V GLGNPG +Y RHN G M D + + A ++ L D
Sbjct: 21 WLVVGLGNPGDKYAGTRHNCGSMVTDCFVKQSGQTYRNQSLARAGVVARVATVSLGYGVD 80
Query: 53 GLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGH 112
+ I+ ++MN SG + E++++Y+L + + LVIHD+LDL+ G ++LK GG D GH
Sbjct: 81 APKIIVAHTGSYMNESGPGVKELLDYYRLGS-DRLLVIHDELDLEMGYVKLKVGGSDGGH 139
Query: 113 NGLKSISEKCG-KNYKRLRIGIGR----PPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
NGLKSI + G K++ RLRIGIGR P +I VLG ++ L ++D +
Sbjct: 140 NGLKSIQKALGTKDFARLRIGIGRPVKMPGGGFDVINWVLGRIPKSQQTILDEVLDRAVQ 199
Query: 168 SLPLLAKREDVSFLNHIV 185
+ +A+ +
Sbjct: 200 CVTDIAENGLAKAQARLH 217
>gi|157412610|ref|YP_001483476.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9215]
gi|167011996|sp|A8G2Q9|PTH_PROM2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|157387185|gb|ABV49890.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9215]
Length = 200
Score = 196 bits (500), Expect = 9e-49, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 108/195 (55%), Gaps = 9/195 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIK 60
+++ GLGNPG ++ +RHNIGF+ ++ + +K K + SE Q+D L
Sbjct: 5 YLI-GLGNPGKKFLNSRHNIGFLLLEYFSKKYNSNFLFKDKLKSSYSEFQIDNSSYRLFL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++++YK+ NL+ +I DD DL G +R + G GHNGLKSI E
Sbjct: 64 PNTFMNNSGYAVRAIVDWYKI-NLDQIFIIVDDKDLPLGKIRFRRKGSSGGHNGLKSIIE 122
Query: 121 KC-GKNYKRLRIGIGRPPD-----TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ + +KR+RIGIG PP + I HVLGN S E+ L + + SL L
Sbjct: 123 QLQTQKFKRIRIGIGSPPPIKGEKNFNTISHVLGNISLEEKSILDKVFRRVIESLEKLNT 182
Query: 175 REDVSFLNHIVSVRK 189
+++ +N + S K
Sbjct: 183 KKEEYIINELNSFDK 197
>gi|225012235|ref|ZP_03702672.1| Aminoacyl-tRNA hydrolase [Flavobacteria bacterium MS024-2A]
gi|225003790|gb|EEG41763.1| Aminoacyl-tRNA hydrolase [Flavobacteria bacterium MS024-2A]
Length = 204
Score = 196 bits (500), Expect = 9e-49, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 99/185 (53%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G EY RHN+GF +D+I + W+ K A+ + + G + ILIKP
Sbjct: 20 FLIVGLGNIGEEYENTRHNVGFSILDQIAEKNEC-LWETKKLADYTLLKKKGRQFILIKP 78
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ +P LEN L++ D++ L FGT+R+K G AGHNGLK I +
Sbjct: 79 NTFMNRSGKAVRYWALQENIP-LENILILTDEIHLPFGTIRIKGKGSPAGHNGLKDIENQ 137
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
NY RLR GIG+ ++ VL + E+ L + ++++ S
Sbjct: 138 LNTPNYARLRFGIGQEQKAFDQVKFVLDPWEVSEQKVLPERFELCSKAILSFGLEGLNSA 197
Query: 181 LNHIV 185
+NH
Sbjct: 198 MNHFN 202
>gi|322379485|ref|ZP_08053851.1| peptidyl-tRNA hydrolase [Helicobacter suis HS1]
gi|322380466|ref|ZP_08054665.1| peptidyl-tRNA hydrolase [Helicobacter suis HS5]
gi|321147111|gb|EFX41812.1| peptidyl-tRNA hydrolase [Helicobacter suis HS5]
gi|321148092|gb|EFX42626.1| peptidyl-tRNA hydrolase [Helicobacter suis HS1]
Length = 184
Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 64/186 (34%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILI 59
M + GLGNP Y RHN+GF +D + K ++ + + L L+
Sbjct: 1 MLL-VGLGNPTPAYAHTRHNVGFDILDLLAQDLGVHFIHKAQYCGDYARIDL----IHLL 55
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSGQ+L + +K + L+IHDDLDL GTLR K GG GHNGLKSI
Sbjct: 56 KPTTYMNLSGQALEAFLRHHK---PRSILIIHDDLDLPLGTLRFKAKGGHGGHNGLKSIM 112
Query: 120 EKCGKNYKRLRIGIGRPPD--TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+ C + + +++IGIGR + I +VL F + E + + ++L K +D
Sbjct: 113 QHCSQPFYKMKIGIGRAHENTRDATISYVLQRFLAQEEPLKQEVFTHAKQALLFYLKTQD 172
Query: 178 VSFLNH 183
+ + +
Sbjct: 173 FTAMQN 178
>gi|290889682|ref|ZP_06552771.1| hypothetical protein AWRIB429_0161 [Oenococcus oeni AWRIB429]
gi|290480679|gb|EFD89314.1| hypothetical protein AWRIB429_0161 [Oenococcus oeni AWRIB429]
Length = 190
Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 67/188 (35%), Positives = 106/188 (56%), Gaps = 7/188 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
IV GLGN G +Y NRHN+GFM +D + + + K+ HA ++ ++ + L+K
Sbjct: 3 KIVVGLGNIGAKYAHNRHNVGFMAVDELAARLQANFSLKQNLHAFVASTHVEEEKVYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MN SG ++ V+N++ ++ + +V DD+D D+G LR+K G GHNGLKSI
Sbjct: 63 PTTMMNDSGIAVKAVLNYFG-GDVNDLIVFVDDIDRDYGQLRIKKSGASGGHNGLKSIVS 121
Query: 121 KC-GKNYKRLRIGIGRPPD-TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ + + R+RIG GRP +I+HVLG+FS + + P IDN + +
Sbjct: 122 QIASQEFLRIRIGTGRPAHNPQAVIKHVLGDFSPLQLELVQPEIDNGVSAALDIING--- 178
Query: 179 SFLNHIVS 186
+ LN + +
Sbjct: 179 TALNVVTN 186
>gi|225166108|ref|ZP_03727839.1| Aminoacyl-tRNA hydrolase [Opitutaceae bacterium TAV2]
gi|224799650|gb|EEG18148.1| Aminoacyl-tRNA hydrolase [Opitutaceae bacterium TAV2]
Length = 193
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 6/187 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD---GLRTILI 59
+VAGLGNPG EY RHNIG++ ++ + W+ + A + D G +L
Sbjct: 5 LVAGLGNPGREYEYTRHNIGWIVVEALARQLGLS-WETRRSAAADVARWDPAPGQTILLA 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG+++ + FYK+P + ++DDL +D G +++ G GHNG+ S+
Sbjct: 64 KPLTYMNDSGRAVQALTGFYKIP-ASAVIAVYDDLTIDLGLIKVSITGSAGGHNGVASLI 122
Query: 120 EKCGKNYKRLRIGIG-RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ G + R R+GIG + P + +VLG F+ + L ++ L LL
Sbjct: 123 QCLGGGFIRYRLGIGPKQPREIDLRDYVLGRFTPEQYTLLEQNLERYVSGLRLLINDGPD 182
Query: 179 SFLNHIV 185
+N +
Sbjct: 183 KAMNLLN 189
>gi|212550488|ref|YP_002308805.1| peptidyl-tRNA hydrolase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|229620034|sp|B6YQC2|PTH_AZOPC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|212548726|dbj|BAG83394.1| peptidyl-tRNA hydrolase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 186
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 67/182 (36%), Positives = 95/182 (52%), Gaps = 3/182 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++VAGLGN G +Y +RHNIGFM +D + + K + I+ +L L+KP
Sbjct: 3 YLVAGLGNVGQKYENSRHNIGFMILDALAKASSV-VFTDKCYGAIASLKLKNKCLFLLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ + + + EN L++ DDL L FG+LRLKT G D GHNGLK+I
Sbjct: 62 STYMNLSGNAIRYWLQKENIYS-ENLLILVDDLSLPFGSLRLKTKGSDGGHNGLKNIQYT 120
Query: 122 CGKNYK-RLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
Y RLR GIG + I +VL NF+ E+ L I+ +
Sbjct: 121 LRTKYYNRLRFGIGNNFPSGCQINYVLDNFTKEEKKHLSERIEKAIEIVYSFCLSGSEIT 180
Query: 181 LN 182
+N
Sbjct: 181 MN 182
>gi|242309278|ref|ZP_04808433.1| peptidyl-tRNA hydrolase [Helicobacter pullorum MIT 98-5489]
gi|239524319|gb|EEQ64185.1| peptidyl-tRNA hydrolase [Helicobacter pullorum MIT 98-5489]
Length = 194
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 77/175 (44%), Positives = 103/175 (58%), Gaps = 8/175 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILI 59
MF++ GLGN G +Y NRHNIGF +D + S K F E+ + + +L+
Sbjct: 1 MFLIVGLGNIGDKYKNNRHNIGFRVVDALISNLNAIKQSDKNFEGELYK----SSQILLL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S+ V NFYK+ + LVIHD+LDL FG ++ K GGG GHNGLKSI
Sbjct: 57 KPSTYMNLSGKSVSAVKNFYKIK---DMLVIHDELDLPFGVIKFKFGGGSGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
CG Y R+R GIG+P +I VLG+FS E + +I+ R +AK
Sbjct: 114 NLCGNEYYRMRYGIGKPSTKEQVIDWVLGDFSKEEENDNIELIEYCMRVALEIAK 168
>gi|227548220|ref|ZP_03978269.1| peptidyl-tRNA hydrolase [Corynebacterium lipophiloflavum DSM 44291]
gi|227079694|gb|EEI17657.1| peptidyl-tRNA hydrolase [Corynebacterium lipophiloflavum DSM 44291]
Length = 200
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 66/189 (34%), Positives = 101/189 (53%), Gaps = 11/189 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKF-HAEISEGQLDGLRTILIK 60
++V GLGNPG EY + RHN+G+M +DR+ S + A ++ DG+ +
Sbjct: 21 WLVVGLGNPGEEYAKTRHNVGWMALDRLLSHGGVTLRQDHAVKALVA--VKDGIAY--AR 76
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ + +P E +V+HD+LDL G +RL+ GG + GHNGLKS+SE
Sbjct: 77 PLTYMNESGAAVGPLAARLNVP-AERVIVLHDELDLPPGRVRLRRGGSENGHNGLKSLSE 135
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++Y R+RIGIGRPP + VL + + + A++ L+
Sbjct: 136 HLGTRDYVRVRIGIGRPPGGTAVPDWVLSAVTGD----VSAETEKAAQAARLVIVDGLER 191
Query: 180 FLNHIVSVR 188
N I + R
Sbjct: 192 AQNQIHASR 200
>gi|118587140|ref|ZP_01544569.1| peptidyl-tRNA hydrolase [Oenococcus oeni ATCC BAA-1163]
gi|118432419|gb|EAV39156.1| peptidyl-tRNA hydrolase [Oenococcus oeni ATCC BAA-1163]
Length = 190
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 67/188 (35%), Positives = 107/188 (56%), Gaps = 7/188 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIK 60
IV GLGN G +Y NRHN+GFM +D + + + K+ HA ++ ++ + L+K
Sbjct: 3 KIVVGLGNIGAKYAHNRHNVGFMAVDELAARLQANFSLKQNLHAFVASTHVEEEKVYLVK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T MN SG ++ V+N++ + ++ + +V DD+D D+G LR+K G GHNGLKSI
Sbjct: 63 PTTMMNDSGIAVKAVLNYF-VGDVNDLIVFVDDIDRDYGQLRIKKSGASGGHNGLKSIVS 121
Query: 121 KC-GKNYKRLRIGIGRPPD-TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
+ + + R+RIG GRP +I+HVLG+FS + + P IDN + +
Sbjct: 122 QIASQEFLRIRIGAGRPAHNPQAVIKHVLGDFSPLQLELVQPEIDNGVSAALDIING--- 178
Query: 179 SFLNHIVS 186
+ LN + +
Sbjct: 179 TALNVVTN 186
>gi|87301942|ref|ZP_01084776.1| peptidyl-tRNA hydrolase [Synechococcus sp. WH 5701]
gi|87283510|gb|EAQ75465.1| peptidyl-tRNA hydrolase [Synechococcus sp. WH 5701]
Length = 208
Score = 195 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 8/193 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y + RHN+GFM +D++ K I++ R L+KP
Sbjct: 13 LLIGLGNPGEKYAQTRHNVGFMALDQLAQRDGASFRANGKLQGTIADLGQGSDRLRLLKP 72
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S+ ++++ L + LV+ DD+DL G LRL+ G GHNGL+S
Sbjct: 73 STYMNESGRSIRATLDWFGLRP-DQMLVLVDDMDLPLGRLRLRRSGSAGGHNGLRSTISH 131
Query: 122 CG-KNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G +++ RLRIGIG P A I HVLG F + E L ++ + + + +
Sbjct: 132 LGSQDFARLRIGIGAPALDPALRKARTISHVLGRFEADELPLLQQVLTEVLEGVSFIRRW 191
Query: 176 EDVSFLNHIVSVR 188
+ S +
Sbjct: 192 GYERAGTRLNSFQ 204
>gi|291277021|ref|YP_003516793.1| peptidyl-tRNA hydrolase [Helicobacter mustelae 12198]
gi|290964215|emb|CBG40064.1| peptidyl-tRNA hydrolase [Helicobacter mustelae 12198]
Length = 184
Score = 195 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 74/187 (39%), Positives = 111/187 (59%), Gaps = 8/187 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHNIGF I+ + + K E+++ + LIKP
Sbjct: 4 LIVGLGNPGPQYQNTRHNIGFEVIEALADSIKISFRYDSKLLCELAQYKTKEQNFFLIKP 63
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSGQS+ +V ++YK+ EN LVIHD+LD+ G +R K+GGG+ GHNGLKSI +
Sbjct: 64 QTFMNLSGQSVKKVQDYYKI---ENLLVIHDELDIPVGAVRFKSGGGNGGHNGLKSIDQN 120
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
CG Y+R+R GIGR ++ +VLG F E+ + I + R+L + D +
Sbjct: 121 CGNTYQRMRCGIGR-SALIPVVDYVLGKFEEKEKKQM---ITHCVRALLEFLQNPDFVRM 176
Query: 182 NHIVSVR 188
++ +++
Sbjct: 177 QNLFTIK 183
>gi|229816292|ref|ZP_04446601.1| hypothetical protein COLINT_03344 [Collinsella intestinalis DSM
13280]
gi|229808143|gb|EEP43936.1| hypothetical protein COLINT_03344 [Collinsella intestinalis DSM
13280]
Length = 209
Score = 195 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 66/165 (40%), Positives = 92/165 (55%), Gaps = 9/165 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG-------LR 55
+VAGLGNPG EY RHN GF ID + WK + AE++ ++
Sbjct: 11 MVAGLGNPGEEYAATRHNAGFCAIDVLAEKAGVSYWKNQAGAEVAVINVNDAEAEGGKRE 70
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L+KPQ++MN SG + ++ YK+ E LVIHD+LD+ G +R+K GGG AGHNGL
Sbjct: 71 VVLVKPQSYMNTSGGPISKLCAQYKVKP-EELLVIHDELDIPAGDVRVKVGGGHAGHNGL 129
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL 159
+SI +K G +++ R+R GIG PP + VL S E
Sbjct: 130 RSIIDKLGSRDFSRIRAGIGNPPGRMPVADFVLKQLRSREAEDFE 174
>gi|239907581|ref|YP_002954322.1| peptidyl-tRNA hydrolase [Desulfovibrio magneticus RS-1]
gi|259535170|sp|C4XHR2|PTH_DESMR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|239797447|dbj|BAH76436.1| peptidyl-tRNA hydrolase [Desulfovibrio magneticus RS-1]
Length = 211
Score = 195 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 66/196 (33%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTIL---- 58
I+ GLGNPG Y RHN GFM +D + K L+ + L
Sbjct: 6 IIVGLGNPGPRYAATRHNFGFMVLDALMERARQLGGAPKA-TLTGRKDLEAVTLSLPVLP 64
Query: 59 ---------IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGD 109
+KP TFMNLSG+++ ++FYKL + V+HD+LDL G +RLK GGG+
Sbjct: 65 GGAFAQFACVKPLTFMNLSGRAVRAALDFYKLAPT-DVFVLHDELDLPLGRMRLKRGGGN 123
Query: 110 AGHNGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
AGHNGLKSI+++ G + RLR+GIGRP + +VL F E + ++
Sbjct: 124 AGHNGLKSINQELGSPEFVRLRLGIGRPEGR-DVAGYVLEAFRGDETPVVRQVVPAAVDG 182
Query: 169 LPLLAKREDVSFLNHI 184
+ + + +
Sbjct: 183 IMAFFEDGLETAQRRV 198
>gi|305665463|ref|YP_003861750.1| peptidyl-tRNA hydrolase [Maribacter sp. HTCC2170]
gi|88710219|gb|EAR02451.1| peptidyl-tRNA hydrolase [Maribacter sp. HTCC2170]
Length = 209
Score = 195 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G EY E RHNIGF +D++ F K I ++ G + +KP
Sbjct: 25 FLIVGLGNIGSEYAETRHNIGFKILDQLAKEKDFVFETAKL-GAIGSFKIKGRTVLCLKP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG++L M K+P +EN LV+ DD++L+FGT+RLKT G D GHNGLK I
Sbjct: 84 STYMNRSGKALKYWMEKEKIP-IENLLVVTDDINLEFGTIRLKTKGSDGGHNGLKDIQLF 142
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+Y R R G+G + +VLG ++ E+ + ++ + +
Sbjct: 143 LNSTSYNRFRFGVGADFGKGRQVDYVLGEWNEKEKDSMTERLEKSIQLISSFILAGVKIT 202
Query: 181 LNHIV 185
+N
Sbjct: 203 MNQFN 207
>gi|56417305|ref|YP_154379.1| peptidyl-tRNA hydrolase [Anaplasma marginale str. St. Maries]
gi|255004785|ref|ZP_05279586.1| peptidyl-tRNA hydrolase [Anaplasma marginale str. Virginia]
gi|68052888|sp|Q5P9A6|PTH_ANAMM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|56388537|gb|AAV87124.1| peptidyl-tRNA hydrolase [Anaplasma marginale str. St. Maries]
Length = 186
Score = 195 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 106/184 (57%), Gaps = 4/184 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF+ D + FP + K+ A +S G + R +++K
Sbjct: 1 MLLLVGLGNPGKQYEFTRHNVGFVVADTVARDFNFPEFSSKYDALVSVGNVGLHRAMIVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++L+ + +K+P E V HDD DL G +++K GGG+AGHNGL+SI
Sbjct: 61 PATFMNRSGAAVLKAASMHKIP-AEQITVFHDDADLQHGVVKVKQGGGNAGHNGLRSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y R+R+G+GRP D + HVL +F + + + I+ +L L F
Sbjct: 120 AIGCQYWRVRLGVGRP-DVGSLSGHVLSDFH--DFDSVQQLAHKISANLTELLDGNVNGF 176
Query: 181 LNHI 184
++ I
Sbjct: 177 ISKI 180
>gi|254525968|ref|ZP_05138020.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9202]
gi|221537392|gb|EEE39845.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9202]
Length = 200
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 110/195 (56%), Gaps = 9/195 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIK 60
+++ GLGNPG ++ ++RHNIGF+ ++ + +K K + SE Q+D L
Sbjct: 5 YLI-GLGNPGKKFLKSRHNIGFLLLEYFSKKYNSNFLFKDKLKSSYSEFQIDNSSYRLFL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++++YK+ NL+ +I DD DL G +R + G GHNGLKSI E
Sbjct: 64 PNTFMNNSGYAVRAIVDWYKI-NLDQIFIIVDDKDLPLGKIRFRRKGSSGGHNGLKSIIE 122
Query: 121 KC-GKNYKRLRIGIGRPPD-----TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+ +N+KR+RIGIG PP + I HVLGN S E+ L + + SL L
Sbjct: 123 QLQTQNFKRIRIGIGSPPPIKGEKNFNTISHVLGNISLEEKSILDKVFMRVIESLEKLNT 182
Query: 175 REDVSFLNHIVSVRK 189
+++ +N + S K
Sbjct: 183 KKEEYIINELNSFDK 197
>gi|325858407|ref|ZP_08172569.1| aminoacyl-tRNA hydrolase [Prevotella denticola CRIS 18C-A]
gi|327313925|ref|YP_004329362.1| aminoacyl-tRNA hydrolase [Prevotella denticola F0289]
gi|325483045|gb|EGC86033.1| aminoacyl-tRNA hydrolase [Prevotella denticola CRIS 18C-A]
gi|326946082|gb|AEA21967.1| aminoacyl-tRNA hydrolase [Prevotella denticola F0289]
Length = 190
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG Y RHN G+M +D ++ K + ++E + G + IL+KP
Sbjct: 4 YLICGLGNPGQTYEGTRHNTGYMVLDAFAKASNI-VFEDKRYGFVAETTVKGRKVILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + LV+ DD+ L G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNKEHIDQ-SRLLVVSDDVALPLGAFRLKGSGSNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G++Y RLR+G+G + VLG++S E L P ID + +
Sbjct: 122 IGQDYARLRMGVGNDYPRGGQVDWVLGHYSDEEMKVLQPSIDLSIDIIKSFVLAGIDITM 181
Query: 182 NHIVSVRK 189
N + K
Sbjct: 182 NQFNKLGK 189
>gi|210634808|ref|ZP_03298314.1| hypothetical protein COLSTE_02241 [Collinsella stercoris DSM 13279]
gi|210158612|gb|EEA89583.1| hypothetical protein COLSTE_02241 [Collinsella stercoris DSM 13279]
Length = 209
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 66/162 (40%), Positives = 94/162 (58%), Gaps = 9/162 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG-------LR 55
+VAGLGNPG EY + RHN GF +D + S WK + AE++ ++
Sbjct: 11 MVAGLGNPGDEYADTRHNAGFKAVDVLASQAGVSYWKNQAGAEVALINVNDPEAEGGKRE 70
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+L+KPQ++MN SG + ++ YK+ E LVIHD+LD+ G +R+K GGG AGHNGL
Sbjct: 71 VVLVKPQSYMNTSGGPISKLCAQYKVKP-EELLVIHDELDIPAGDVRVKVGGGHAGHNGL 129
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERY 156
+SI +K G +++ R+R GIG PP + VL S E
Sbjct: 130 RSIIDKLGSRDFSRIRAGIGDPPGRMPVADFVLKQLRSREAE 171
>gi|222475669|ref|YP_002564086.1| peptidyl-tRNA hydrolase (pth) [Anaplasma marginale str. Florida]
gi|254783848|sp|B9KHC6|PTH_ANAMF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|222419807|gb|ACM49830.1| peptidyl-tRNA hydrolase (pth) [Anaplasma marginale str. Florida]
Length = 186
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 70/184 (38%), Positives = 106/184 (57%), Gaps = 4/184 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y RHN+GF+ D + FP + K+ A +S G + R +++K
Sbjct: 1 MLLLVGLGNPGKQYEFTRHNVGFVVADTVARDFDFPEFSSKYDALVSVGNVGLHRAMIVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++L+ + +K+P E V HDD DL G +++K GGG+AGHNGL+SI
Sbjct: 61 PATFMNRSGAAVLKAASMHKIP-AEQITVFHDDADLQHGVVKVKQGGGNAGHNGLRSIDA 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y R+R+G+GRP D + HVL +F + + + I+ +L L F
Sbjct: 120 AIGCQYWRVRLGVGRP-DAGSLSGHVLSDFH--DFDSVQQLAHKISANLTELLDGNVNGF 176
Query: 181 LNHI 184
++ I
Sbjct: 177 ISKI 180
>gi|148358612|ref|YP_001249819.1| peptidyl tRNA hydrolase [Legionella pneumophila str. Corby]
gi|296108298|ref|YP_003619999.1| peptidyl-tRNA hydrolase, PTH1 family [Legionella pneumophila
2300/99 Alcoy]
gi|166199356|sp|A5IAS3|PTH_LEGPC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|148280385|gb|ABQ54473.1| peptidyl tRNA hydrolase [Legionella pneumophila str. Corby]
gi|295650200|gb|ADG26047.1| peptidyl-tRNA hydrolase, PTH1 family [Legionella pneumophila
2300/99 Alcoy]
Length = 189
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG Y + RHN G + + H KK AE++E ++ L+
Sbjct: 4 KLIVGLRNPGSAYEQTRHNAGAWLVTALAQRHNSHFKIDKKMQAELTEIDINNHPCRLVL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +FMN SGQ+ + FYK+ E L++HD+LDL G ++LKTGGG GHNGL+ I+
Sbjct: 64 PLSFMNHSGQTTRIISQFYKIEPGE-ILIVHDELDLPVGRIKLKTGGGHGGHNGLRDITA 122
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + RLRIGIG P + ++VL S +R + ID +P++ +
Sbjct: 123 QLGTGVFHRLRIGIGHPGHKDLVHQYVLSRPSMHDRQQIYDAIDRGIAIIPIVLSGDMAR 182
Query: 180 FLNHIVS 186
+N + +
Sbjct: 183 AMNQVNA 189
>gi|118497595|ref|YP_898645.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. novicida
U112]
gi|134302016|ref|YP_001121985.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|187931853|ref|YP_001891838.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. mediasiatica
FSC147]
gi|254374410|ref|ZP_04989892.1| peptidyl-tRNA hydrolase [Francisella novicida GA99-3548]
gi|166199331|sp|A0Q6M6|PTH_FRATN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|166199332|sp|A4IY63|PTH_FRATW RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238691571|sp|B2SH51|PTH_FRATM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|118423501|gb|ABK89891.1| peptidyl-tRNA hydrolase [Francisella novicida U112]
gi|134049793|gb|ABO46864.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151572130|gb|EDN37784.1| peptidyl-tRNA hydrolase [Francisella novicida GA99-3548]
gi|187712762|gb|ACD31059.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. mediasiatica
FSC147]
Length = 191
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GLGN G EY + RHN+G I +I + K + +++ +D +L+
Sbjct: 5 KMIVGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNPKLNCNLAKVSIDYNNVVLVF 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ +V NFYK+ E LV+HD+LD+D G +RLK GGG GHNGL+SI++
Sbjct: 65 PTTYMNNSGLAVSKVANFYKIAPAE-ILVVHDELDIDSGEIRLKKGGGHGGHNGLRSINQ 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y RLRIGIG P + + +VL N S ++ + IDN L + +
Sbjct: 124 HLGTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDNGICFLDDIINYKLEP 183
Query: 180 FLNHIVS 186
+ + +
Sbjct: 184 VMQKLHT 190
>gi|289805455|ref|ZP_06536084.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 162
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 63/159 (39%), Positives = 86/159 (54%), Gaps = 4/159 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L+G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYF 157
K G N+ RLR+GIG P D ++ VLG E+
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKL 161
>gi|198283911|ref|YP_002220232.1| peptidyl-tRNA hydrolase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665738|ref|YP_002426545.1| peptidyl-tRNA hydrolase [Acidithiobacillus ferrooxidans ATCC 23270]
gi|226694245|sp|B5EKJ0|PTH_ACIF5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226723245|sp|B7J502|PTH_ACIF2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|198248432|gb|ACH84025.1| Aminoacyl-tRNA hydrolase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218517951|gb|ACK78537.1| peptidyl-tRNA hydrolase [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 189
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 93/187 (49%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+++AGLGNPG EY RHN GF + + +K++H + + GL L
Sbjct: 3 WLLAGLGNPGAEYARTRHNAGFWTLQTLADRVGASLRMEKRWHCLAATARASGLELGLCM 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ FMN SG + + FYK+ E LV+HD+LDL G RLK GGG GHNGL+ +
Sbjct: 63 PQDFMNRSGGPVQAMAAFYKVA-AERILVMHDELDLPPGAARLKRGGGHGGHNGLRDLDR 121
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++Y RLRIGIG P +I +VL ++ + I+ LP +
Sbjct: 122 ALGTRDYWRLRIGIGHPGHKDAVIPYVLSAPPPADKTLIDEAIERSLGVLPDFLCGRTDA 181
Query: 180 FLNHIVS 186
+ S
Sbjct: 182 AQKSLHS 188
>gi|297621051|ref|YP_003709188.1| Peptidyl-tRNA hydrolase [Waddlia chondrophila WSU 86-1044]
gi|297376352|gb|ADI38182.1| Peptidyl-tRNA hydrolase [Waddlia chondrophila WSU 86-1044]
Length = 206
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 67/189 (35%), Positives = 101/189 (53%), Gaps = 4/189 (2%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIKPQ 62
GLGNPG +Y RHN+GF+ I+ H +KK A+ + Q+ L+ P
Sbjct: 11 FVGLGNPGSKYAMTRHNMGFLLIESFARLHGVILKEEKKLQAKTGKCQIGEWTVHLLMPL 70
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSGQ++ +N++KL +V D+ + FG LRL+ G GHNGLKS+ +
Sbjct: 71 TYMNLSGQAVGRFINYFKLTTDNVVVVTD-DVAIPFGELRLREKGSAGGHNGLKSVEQHL 129
Query: 123 GKN-YKRLRIGIGRPPDT-AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + Y RLR+GIGR D + +VL F+ E L +++ ++L LL K +
Sbjct: 130 GSHCYTRLRVGIGRGVDPSQELSDYVLDPFNKSEMEQLPSLLNQGVKALELLLKDSLQNA 189
Query: 181 LNHIVSVRK 189
+N + S K
Sbjct: 190 MNVVNSKLK 198
>gi|208779396|ref|ZP_03246742.1| peptidyl-tRNA hydrolase [Francisella novicida FTG]
gi|254372959|ref|ZP_04988448.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. novicida
GA99-3549]
gi|151570686|gb|EDN36340.1| peptidyl-tRNA hydrolase [Francisella novicida GA99-3549]
gi|208745196|gb|EDZ91494.1| peptidyl-tRNA hydrolase [Francisella novicida FTG]
Length = 191
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GLGN G EY + RHN+G I +I + K + +++ +D +L+
Sbjct: 5 KMIVGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNPKLNCNLAKVSIDYNNVVLVF 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ +V NFYK+ E LV+HD+LD+D G +RLK GGG GHNGL+SI++
Sbjct: 65 PTTYMNNSGLAVSKVANFYKIAPAE-ILVVHDELDIDSGEIRLKKGGGHGGHNGLRSINQ 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y RLRIGIG P + + +VL N S ++ + IDN L + +
Sbjct: 124 HLGTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDNAIDNGICFLDDIINYKLEP 183
Query: 180 FLNHIVS 186
+ + +
Sbjct: 184 VMQKLHT 190
>gi|189218768|ref|YP_001939409.1| Peptidyl-tRNA hydrolase [Methylacidiphilum infernorum V4]
gi|259535210|sp|B3E0Q7|PTH_METI4 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189185626|gb|ACD82811.1| Peptidyl-tRNA hydrolase [Methylacidiphilum infernorum V4]
Length = 186
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 7/184 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
IV GLGNPG EY + RHNIG+ ++ + KK ++++ + + + P
Sbjct: 6 IVVGLGNPGQEYEKTRHNIGWRVVEELVKRQNLSFKIDKKAKSKVA----FKEKLVFVLP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSGQ+L ++ K + ++ LVI DD+ L G LR + G GH GL+SI E+
Sbjct: 62 LTYMNLSGQALSYLLQKEKC-SSKDILVILDDISLPLGKLRFRPKGSSGGHKGLESIIEE 120
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
++ RLR+GIG P+ + +VL F E+ + +I + L K
Sbjct: 121 LHTEDIPRLRLGIGPLPEGEQLADYVLKPFLEEEKDKVEEMILKAIQFFECLQKEGIEIA 180
Query: 181 LNHI 184
LN +
Sbjct: 181 LNKL 184
>gi|328675850|gb|AEB28525.1| Peptidyl-tRNA hydrolase [Francisella cf. novicida 3523]
Length = 191
Score = 194 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GLGN G EY + RHN+G I +I + K + +++ +D IL+
Sbjct: 5 KMIVGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNPKLNCNLAKVSIDYNNVILVF 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ +V NFYK+ E LV+HD+LD+D G +RLK GGG GHNGL+SI++
Sbjct: 65 PTTYMNNSGLAVGKVANFYKIEP-EEILVVHDELDIDSGEIRLKKGGGHGGHNGLRSINQ 123
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y RLRIGIG P + + +VL N S ++ + IDN L + +
Sbjct: 124 HLGNNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDNAIDNGICFLDDIINYKLEP 183
Query: 180 FLNHIVS 186
+ + +
Sbjct: 184 VMQKLHT 190
>gi|89256305|ref|YP_513667.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
LVS]
gi|115314752|ref|YP_763475.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
OSU18]
gi|167010180|ref|ZP_02275111.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
FSC200]
gi|169656592|ref|YP_001428439.2| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|254367638|ref|ZP_04983659.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
257]
gi|254369284|ref|ZP_04985296.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
FSC022]
gi|290953139|ref|ZP_06557760.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
URFT1]
gi|295313667|ref|ZP_06804251.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
URFT1]
gi|119390943|sp|Q2A3N5|PTH_FRATH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390944|sp|Q0BM46|PTH_FRATO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|189038313|sp|A7NBY0|PTH_FRATF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|89144136|emb|CAJ79395.1| Peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
LVS]
gi|115129651|gb|ABI82838.1| aminoacyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
OSU18]
gi|134253449|gb|EBA52543.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
257]
gi|157122234|gb|EDO66374.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
FSC022]
gi|164551660|gb|ABU61483.2| peptidyl-tRNA hydrolase [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 191
Score = 194 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
++ GLGN G EY + RHN+G I +I + + K + +++ +D +L+
Sbjct: 5 KMIVGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNTKLNCNLAKVSIDYNNVVLVF 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ +V NFYK+ E LV HD+LD+D G +RLK GGG GHNGL+SI++
Sbjct: 65 PTTYMNNSGLAVSKVANFYKIAPAE-ILVAHDELDIDSGEIRLKKGGGHGGHNGLRSINQ 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y RLRIGIG P + + +VL N S ++ + IDN L + +
Sbjct: 124 HLGTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDNGICFLDDIINYKLEP 183
Query: 180 FLNHIVS 186
+ + +
Sbjct: 184 VMQKLHT 190
>gi|288803708|ref|ZP_06409137.1| aminoacyl-tRNA hydrolase [Prevotella melaninogenica D18]
gi|288333797|gb|EFC72243.1| aminoacyl-tRNA hydrolase [Prevotella melaninogenica D18]
Length = 186
Score = 194 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 94/187 (50%), Gaps = 2/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG+EY RHN GFM +D ++ K + ++E + G + IL+KP
Sbjct: 1 MICGLGNPGYEYEGTRHNTGFMVLDAFAKASNI-VFEDKRYGFVAETTVKGRKIILLKPT 59
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMNLSG ++ +N + LV+ DD+ L G RLK G + GHNGL I +
Sbjct: 60 TFMNLSGNAVRYWLNKENIDQ-SRLLVVSDDVALPLGAFRLKGNGSNGGHNGLGHIQQLI 118
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
G+NY RLR+G+G + VLG +S E L P ID + A +N
Sbjct: 119 GQNYARLRMGVGNDYPRGGQVDWVLGRYSDEEMKELQPAIDLGVDIIKSFALAGIDITMN 178
Query: 183 HIVSVRK 189
+ K
Sbjct: 179 QFNKLGK 185
>gi|331694718|ref|YP_004330957.1| peptidyl-tRNA hydrolase [Pseudonocardia dioxanivorans CB1190]
gi|326949407|gb|AEA23104.1| Peptidyl-tRNA hydrolase [Pseudonocardia dioxanivorans CB1190]
Length = 193
Score = 194 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 76/187 (40%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG EY E RHN+GF ++ + + + K K +A++ EG+L G + +L KP
Sbjct: 6 LVVGLGNPGPEYAETRHNVGFRVVELLAARAGGGRFSKHKSNADVLEGRLAGRKVVLAKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+T+MN+SG + ++ ++ +P E +V+HDDLDL FG +RLK GGG+ GHNGL+SIS
Sbjct: 66 RTYMNVSGGPVAGLLRYFSVPAAE-LVVVHDDLDLGFGVIRLKQGGGEGGHNGLRSISSS 124
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y R+R GIGRPP VL FS+ ER L +D A + L
Sbjct: 125 VGTRDYLRVRFGIGRPPGRQDPADFVLKRFSAVERKELDLAVDLAADAAEALLSDGLEPA 184
Query: 181 LNHIVSV 187
N ++
Sbjct: 185 QNRFHAL 191
>gi|82523965|emb|CAI78776.1| Peptidyl-tRNA hydrolase [uncultured epsilon proteobacterium]
Length = 185
Score = 194 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 76/174 (43%), Positives = 99/174 (56%), Gaps = 8/174 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y NRHNIGFM ID + F E+ + L+KP
Sbjct: 2 LIVGLGNPGPTYENNRHNIGFMVIDELIKRFDARKLPSSPFKGELFKFS----EHFLLKP 57
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+S+ V NFYK+ E +VIHDDLDL FGTLR K GGG GHNGLKS EK
Sbjct: 58 LTYMNLSGESIQAVKNFYKI---EQVIVIHDDLDLPFGTLRFKFGGGHGGHNGLKSADEK 114
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+ Y R+R+GIG+P + +VL +F+ E+ L I + ++ L K
Sbjct: 115 ISREYLRIRMGIGKPEHKGEVASYVLSDFNPSEQKHLGMWISHTCNAVEFLLKN 168
>gi|297172153|gb|ADI23134.1| peptidyl-tRNA hydrolase [uncultured gamma proteobacterium
HF0770_09E07]
Length = 208
Score = 194 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 66/186 (35%), Positives = 97/186 (52%), Gaps = 2/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
+ GLGNPG +Y +RHN G+ +D I + K K + E L+ +K
Sbjct: 23 LCIVGLGNPGDKYNHSRHNAGYDYLDLICNQLSVELKKSNKIEGLLGETTYKDLKIGFVK 82
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P F+N SG++L ++ YK+ L N LVIHDD+DL+ G ++LK GGG +GH GLK I
Sbjct: 83 PNEFINNSGRTL-SLIKKYKVKELNNVLVIHDDMDLEPGEVKLKIGGGHSGHRGLKDIIN 141
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
K G ++ RLR+GIG PP V+ + E+ L SL L +E +
Sbjct: 142 KVGNDFVRLRLGIGHPPVKEETNAWVIKKPTPSEKEGLNNAFIKANESLDQLLNKEWLIA 201
Query: 181 LNHIVS 186
+N + +
Sbjct: 202 MNDLHT 207
>gi|294660594|ref|NP_853448.2| peptidyl-tRNA hydrolase [Mycoplasma gallisepticum str. R(low)]
gi|26398421|sp|Q8RLD7|PTH_MYCGA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|19699030|gb|AAL91134.1| peptidyl-tRNA hydrolase [Mycoplasma gallisepticum]
gi|284812257|gb|AAP57016.2| Peptidyl-tRNA hydrolase [Mycoplasma gallisepticum str. R(low)]
gi|284930946|gb|ADC30885.1| Peptidyl-tRNA hydrolase [Mycoplasma gallisepticum str. R(high)]
gi|284931701|gb|ADC31639.1| Peptidyl-tRNA hydrolase [Mycoplasma gallisepticum str. F]
Length = 183
Score = 194 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 64/189 (33%), Positives = 97/189 (51%), Gaps = 9/189 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY RHNIGF ID++ K +F+ + I+ K
Sbjct: 1 MKLIVGLGNPGFEYEHTRHNIGFKIIDKLLDVLNLELNKSQFNGLYVKHD----DFIIAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG + +++NFYK+ +++ LVIHD+L + G +RLK G G G+ +I
Sbjct: 57 PLTYMNLSGNFIRQLVNFYKI-QIDDILVIHDELAFNLGVVRLKQNGSANGQKGVANIIS 115
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK--RED 177
+ G +N+KRLR+GI + D +I VL F+ E L I + + K +
Sbjct: 116 QLGTQNFKRLRVGI-KNEDLKNIASFVLSKFAPNELILLESAIASASVIAYDFLKSNKSF 174
Query: 178 VSFLNHIVS 186
+N
Sbjct: 175 SKLMNEYNQ 183
>gi|195536295|ref|ZP_03079302.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. novicida
FTE]
gi|194372772|gb|EDX27483.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. novicida
FTE]
Length = 186
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
++ GLGN G EY + RHN+G I +I + K + +++ +D +L+ P
Sbjct: 1 MIVGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNPKLNCNLAKVSIDYNNVVLVFP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG ++ +V NFYK+ E LV+HD+LD+D G +RLK GGG GHNGL+SI++
Sbjct: 61 TTYMNNSGLAVSKVANFYKIAPAE-ILVVHDELDIDSGEIRLKKGGGHGGHNGLRSINQH 119
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLRIGIG P + + +VL N S ++ + IDN L + +
Sbjct: 120 LGTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDNGICFLDDIINYKLEPV 179
Query: 181 LNHIVS 186
+ + +
Sbjct: 180 MQKLHT 185
>gi|145295096|ref|YP_001137917.1| peptidyl-tRNA hydrolase [Corynebacterium glutamicum R]
gi|140845016|dbj|BAF54015.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 180
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 70/174 (40%), Positives = 100/174 (57%), Gaps = 8/174 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHNIGF + + S F K + QL G I+ KP
Sbjct: 9 LLVVGLGNPGPKYVGTRHNIGFEVAEELVSRSFGSFSAHK-RSNTDIAQLPG--LIVAKP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
++FMNLSG + + +F+K+ + N +V+HD+L+LDFG+++L+ GGGD GHNGLKS S+
Sbjct: 66 RSFMNLSGTPIRALCDFFKI-SPANVIVVHDELELDFGSVKLRQGGGDHGHNGLKSTSKS 124
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K+Y +L +GIGRPP VL F E + + A + L+ K
Sbjct: 125 LGTKDYWKLSMGIGRPPGRMDPASFVLKPFGKQELADIPIM---AADAADLVEK 175
>gi|254458806|ref|ZP_05072230.1| peptidyl-tRNA hydrolase [Campylobacterales bacterium GD 1]
gi|207084572|gb|EDZ61860.1| peptidyl-tRNA hydrolase [Campylobacterales bacterium GD 1]
Length = 185
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 74/188 (39%), Positives = 104/188 (55%), Gaps = 9/188 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y NRHNIGFM ID + + F+ E+ + L+KP
Sbjct: 2 LIVGLGNPGPAYAGNRHNIGFMVIDELIRRNSAQKLSSSSFNGELFKFSNH----FLLKP 57
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG S+L V FYK+ + +VIHDDLDL FGTLR K GGG GHNGLKS +
Sbjct: 58 LTYMNLSGNSILAVKKFYKV---DEVVVIHDDLDLPFGTLRFKHGGGHGGHNGLKSTDQM 114
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
++Y R+R+GIG+P + HVL +FS E L I ++ + + +
Sbjct: 115 ISRDYARVRLGIGKPEHKGEVASHVLSDFSKTETEHLKTWISYTCEAVESMLENSLED-V 173
Query: 182 NHIVSVRK 189
+ +++K
Sbjct: 174 SSKYTIKK 181
>gi|118594522|ref|ZP_01551869.1| peptidyl-tRNA hydrolase [Methylophilales bacterium HTCC2181]
gi|118440300|gb|EAV46927.1| peptidyl-tRNA hydrolase [Methylophilales bacterium HTCC2181]
Length = 190
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 72/188 (38%), Positives = 98/188 (52%), Gaps = 4/188 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
+ GLGNPG +Y RHN GF ID + H K K+ E S Q D +K
Sbjct: 5 KLFVGLGNPGDKYLTTRHNAGFWWIDFVALNHRLSFKKSSKYFGEHSNYQ-DNGDIHFLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ + FYK+ E L+IHD+LD+ G ++LK GGG GHNG+K IS
Sbjct: 64 PSTFMNDSGKSVQAITKFYKIKP-EEILIIHDELDIIPGKVKLKLGGGHGGHNGVKDISN 122
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G N+ RLRIGIG P D + +VL N S + + I + + LL E
Sbjct: 123 QLGSNNFWRLRIGIGHPGDKNEVSDYVLKNPSKIDSNLIEDSIYSSYQIFSLLISGEFDK 182
Query: 180 FLNHIVSV 187
+ + +
Sbjct: 183 AMLSLHTA 190
>gi|307701497|ref|ZP_07638515.1| aminoacyl-tRNA hydrolase [Mobiluncus mulieris FB024-16]
gi|307613289|gb|EFN92540.1| aminoacyl-tRNA hydrolase [Mobiluncus mulieris FB024-16]
Length = 198
Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats.
Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 14/194 (7%)
Query: 5 AGLGNPGHEYCENRHNIGFMCIDRIHS-----FHFFPAWKKKFHAEISEGQ----LDGLR 55
GLGNPG EY + RHN G+M DR + + A++++ + +D +
Sbjct: 2 VGLGNPGIEYAQTRHNCGYMVTDRFVESVGGKYRNQSLGRGGAMAKVADIRLGYGIDAPQ 61
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
I+ T+MN SG + +++ FY++ + + +V+HDD+DL+F +LK GG + GHNGL
Sbjct: 62 VIVAHTGTYMNTSGPVVGQLLKFYQI-DTAHLVVVHDDIDLNFRCAKLKVGGSNGGHNGL 120
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDT---AHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
KSI + G K++ RLRIG+GRPP ++ VLG F E+ L D + +
Sbjct: 121 KSIQQTLGTKDFARLRIGVGRPPSRELGGDVVNWVLGRFPKSEKANLEEFFDRAVQCIND 180
Query: 172 LAKREDVSFLNHIV 185
+A+ +
Sbjct: 181 VAESGLAKAQARLH 194
>gi|227494753|ref|ZP_03925069.1| aminoacyl-tRNA hydrolase [Actinomyces coleocanis DSM 15436]
gi|226831753|gb|EEH64136.1| aminoacyl-tRNA hydrolase [Actinomyces coleocanis DSM 15436]
Length = 198
Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD-------GL 54
+++ GLGNPG +Y NRHNIG M + + + K + A+++ +L G
Sbjct: 6 WLIVGLGNPGKKYARNRHNIGHMVVQAVVAEANGSFSKHRAGAQVATVRLGLLPGGRPGP 65
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
L +MN+SG + +M F+K+ + ++ LV+HD++D+D LRLK GGG+ GHNG
Sbjct: 66 AVHLAYLDCYMNVSGGPVANLMKFFKV-DADHLLVVHDEMDIDAHLLRLKQGGGEGGHNG 124
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
LKSIS+ G KNY RLR G+GRPP +VLG+FS+ + L I + +
Sbjct: 125 LKSISQSIGTKNYCRLRFGVGRPPGRMDPADYVLGDFSAKDGVELDITIREAVDVIEDIV 184
Query: 174 KREDVSFLNHIVS 186
+ S
Sbjct: 185 TTSFADAQQKLHS 197
>gi|329897178|ref|ZP_08271918.1| Peptidyl-tRNA hydrolase [gamma proteobacterium IMCC3088]
gi|328921333|gb|EGG28727.1| Peptidyl-tRNA hydrolase [gamma proteobacterium IMCC3088]
Length = 194
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 64/189 (33%), Positives = 95/189 (50%), Gaps = 6/189 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y + RHN G ++ + H WK K S+ + +L+
Sbjct: 5 LIVGLCNPGTQYDQTRHNAGSWFVESLAKHHNGQ-WKSDAKLFGRTSKIVIGSHELLLLL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ +NFYKL LV+HD+LDL G R K GGG GHNGL+ I
Sbjct: 64 PDTFMNRSGKSVAAAVNFYKL-QSTQVLVVHDELDLSPGIARFKDGGGHGGHNGLRDIIP 122
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G ++ RLRIGIG P + +VL ++ + II ++L + +
Sbjct: 123 ALGNKSDFLRLRIGIGHPGHAKAVSNYVLSKPDQGDKTAIEHIIHEAEQTLTYVLADDLA 182
Query: 179 SFLNHIVSV 187
+N + S+
Sbjct: 183 KAMNQLHSI 191
>gi|289165990|ref|YP_003456128.1| peptidyl-tRNA hydrolase [Legionella longbeachae NSW150]
gi|288859163|emb|CBJ13092.1| putative peptidyl-tRNA hydrolase [Legionella longbeachae NSW150]
Length = 189
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG Y RHN G I + + +KK AE+ + +L+ L
Sbjct: 4 KLIIGLRNPGPAYEHTRHNAGQWLISALAQRYSIFFKLEKKMQAELVDLELNQHLYKLAL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ + FY++ E L++HD+LDL G ++LKTGGG GHNGL+ I
Sbjct: 64 PTTFMNHSGQPTRLISQFYRIQPNE-ILIVHDELDLPAGRIKLKTGGGHGGHNGLRDIIA 122
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + R+RIGIG P + + VL ++ ER ID +P + +
Sbjct: 123 QLGSAEFHRMRIGIGHPGHKDLVHQFVLSKPTAQERQLTYDAIDRGIAVMPFIFSGDFAK 182
Query: 180 FLNHIVS 186
+N + +
Sbjct: 183 AMNQLNA 189
>gi|225023010|ref|ZP_03712202.1| hypothetical protein CORMATOL_03058 [Corynebacterium matruchotii
ATCC 33806]
gi|224944233|gb|EEG25442.1| hypothetical protein CORMATOL_03058 [Corynebacterium matruchotii
ATCC 33806]
Length = 173
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 65/174 (37%), Positives = 99/174 (56%), Gaps = 5/174 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHN G M + + A++++ A ++E +L G R +
Sbjct: 1 MFLIVGLGNPGAKYERTRHNSGVMALTELA---GAVAFRRRGSALVAESRLAGHRVVFAI 57
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ FMN+SG + EV F+K+P + +V+ DDL+L+FGT+RL G HNGL+SI++
Sbjct: 58 PQRFMNVSGGPVKEVAGFFKIPP-QRTIVLFDDLELEFGTIRLPVLGDHG-HNGLRSITK 115
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G +Y R +GIGRPP + VL F+ ER L + ++A +
Sbjct: 116 VFGADYVRAGLGIGRPPGRMPVADFVLKPFTKAERPQLPIMWADMADEVTRFIT 169
>gi|296118211|ref|ZP_06836792.1| aminoacyl-tRNA hydrolase [Corynebacterium ammoniagenes DSM 20306]
gi|295968769|gb|EFG82013.1| aminoacyl-tRNA hydrolase [Corynebacterium ammoniagenes DSM 20306]
Length = 220
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 5/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEI-SEGQLDGLRTILIK 60
++V GLGNPG +Y RHN+G+M ID + + H + + ++ G +L +
Sbjct: 35 WLVVGLGNPGAKYAATRHNVGYMAIDDLLAETGDLVQPVHGHKLLAATVEIAGHTVVLAR 94
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ V + + + + +HD+LDL +RLK GG + GHNGLKS+++
Sbjct: 95 PTTFMNLSGEAIGPVAEKLGI-SADRIIAVHDELDLPENKIRLKLGGNENGHNGLKSLTQ 153
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++Y R+RIGI RPP + I +VL ++ I A + +
Sbjct: 154 HLGTRDYLRVRIGIARPPKGSSIPDYVLAPVNAG--PGFDQSIALAASGVKEIISSGLNK 211
Query: 180 FLNHIVS 186
N I S
Sbjct: 212 AQNTIHS 218
>gi|270159182|ref|ZP_06187838.1| peptidyl-tRNA hydrolase [Legionella longbeachae D-4968]
gi|269987521|gb|EEZ93776.1| peptidyl-tRNA hydrolase [Legionella longbeachae D-4968]
Length = 189
Score = 193 bits (492), Expect = 8e-48, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG Y RHN G I + + +KK AE+ + +L+ L
Sbjct: 4 KLIIGLRNPGPAYEHTRHNAGQWLISALAQRYSIFFKLEKKMQAELVDLELNQHLCKLAL 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ + FY++ E L++HD+LDL G ++LKTGGG GHNGL+ I
Sbjct: 64 PTTFMNHSGQPTRLISQFYRIQPNE-ILIVHDELDLPAGRIKLKTGGGHGGHNGLRDIIA 122
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G + R+RIGIG P + + VL ++ ER ID +P + +
Sbjct: 123 QLGSAEFHRMRIGIGHPGHKDLVHQFVLSKPTAQERQLTYDAIDRGIAVMPFIFSGDFAK 182
Query: 180 FLNHIVS 186
+N + +
Sbjct: 183 AMNQLNA 189
>gi|240047432|ref|YP_002960820.1| peptidyl-tRNA hydrolase [Mycoplasma conjunctivae HRC/581]
gi|239985004|emb|CAT04997.1| Peptidyl-tRNA hydrolase [Mycoplasma conjunctivae]
Length = 189
Score = 193 bits (492), Expect = 8e-48, Method: Composition-based stats.
Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 13/194 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTIL 58
M ++ GLGNPG +Y + +HN+GF ID + + K H I+E IL
Sbjct: 1 MKLIVGLGNPGKQYEKTKHNVGFWAIDALAEKIGAKFKQHLPKTHYSIAE----DYEIIL 56
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLP--NLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+KPQTFMNLSG++++E F K + + LVI+DD+DL G ++ GG G G++
Sbjct: 57 LKPQTFMNLSGEAIVEFRAFCKSKGIKISDMLVIYDDMDLQIGQAIMRAQGGANGQKGMQ 116
Query: 117 SISEKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+I + K KR++IGIGR + H +VL F+ +++ + +I + +
Sbjct: 117 NIIDLLATKEIKRIKIGIGR---SQHAADYVLSPFNLEDQHKIEQVIQKVVEICLFYSTN 173
Query: 176 EDVSFLNHIVSVRK 189
S + + +V K
Sbjct: 174 NFSSTI-QVFNVEK 186
>gi|28572814|ref|NP_789594.1| peptidyl-tRNA hydrolase [Tropheryma whipplei TW08/27]
gi|46576789|sp|Q83HD8|PTH_TROW8 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|28410947|emb|CAD67332.1| peptidyl-tRNA hydrolase [Tropheryma whipplei TW08/27]
Length = 186
Score = 193 bits (492), Expect = 8e-48, Method: Composition-based stats.
Identities = 72/187 (38%), Positives = 100/187 (53%), Gaps = 9/187 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+IVAGLGNPG Y + RHN+G M +D + + K + L +L+KP
Sbjct: 4 YIVAGLGNPGPSYDKTRHNVGQMVLDILS--GGARFRRHKTN----NFYLSLGDILLVKP 57
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+MNLSG + +M F+ ++ + LV+HDD+DL GTLR K GGG AGH GL+SIS+
Sbjct: 58 DAYMNLSGPVIASLMKFH---SVSDLLVLHDDIDLPLGTLRFKQGGGTAGHRGLRSISDC 114
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G +Y RLR+GIGRP + I VL NFS + + I A ++ L V
Sbjct: 115 LGSDYARLRVGIGRPENNQSIEDFVLSNFSPVQTDIISRTIQLAAEAVLHLRDNGFVGVK 174
Query: 182 NHIVSVR 188
I +
Sbjct: 175 QFIAQTK 181
>gi|116617522|ref|YP_817893.1| peptidyl-tRNA hydrolase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|122272277|sp|Q03Z52|PTH_LEUMM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116096369|gb|ABJ61520.1| peptidyl-tRNA hydrolase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 188
Score = 193 bits (492), Expect = 8e-48, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 99/180 (55%), Gaps = 3/180 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M + GLGN G EY + RHNIGFM +D + + K A +++ + G +L+K
Sbjct: 1 MKFIFGLGNIGAEYDQTRHNIGFMAVDAFATANHMSFSPSKQFALVAKTIIGGESVMLVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG+++ ++++Y + +++ D+DL FG +R + G GHNGLKSI
Sbjct: 61 PTTYMNDSGKAVRAILDYYDGDVDDVLVLVD-DMDLPFGKMRFRAKGSAGGHNGLKSIMT 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G + + RL+ G+G P + ++ +VLG F++ E+ + ++D +++ +
Sbjct: 120 HTGSQTFLRLKFGLGHPVHEQNVVVNYVLGKFTAAEKPDIDAMLDRSTQAIADWIQGATA 179
>gi|15827040|ref|NP_301303.1| peptidyl-tRNA hydrolase [Mycobacterium leprae TN]
gi|221229518|ref|YP_002502934.1| peptidyl-tRNA hydrolase [Mycobacterium leprae Br4923]
gi|14195075|sp|Q9CD49|PTH_MYCLE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783881|sp|B8ZU62|PTH_MYCLB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|13092587|emb|CAC29752.1| putative peptidyl-tRNA hydrolase [Mycobacterium leprae]
gi|219932625|emb|CAR70337.1| putative peptidyl-tRNA hydrolase [Mycobacterium leprae Br4923]
Length = 199
Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 104/186 (55%), Gaps = 3/186 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG Y RHN+GFM + + K+ A++ G+L G ++ KP
Sbjct: 14 LVVGLGNPGKNYGRTRHNVGFMVANLLAVRLGSKFEVHKRSGADVVNGRLAGCSMLVAKP 73
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+ +MN SGQ + + Y + + +++HDDLDLDFG +RLK GGG+ GHNGL+S++
Sbjct: 74 RNYMNESGQQVGLLAKLYSVTPA-DIIIVHDDLDLDFGRIRLKLGGGEGGHNGLRSVAAA 132
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G K+++R+RIGIGRP VL NF++ ER + I A + LL
Sbjct: 133 LGTKDFQRVRIGIGRPTGRKDPASFVLENFTTAERMQVPTICKRAADATELLVGLGLEPA 192
Query: 181 LNHIVS 186
NH+ +
Sbjct: 193 QNHVHA 198
>gi|282858293|ref|ZP_06267478.1| putative peptidyl-tRNA hydrolase [Prevotella bivia JCVIHMP010]
gi|282588924|gb|EFB94044.1| putative peptidyl-tRNA hydrolase [Prevotella bivia JCVIHMP010]
Length = 190
Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 65/188 (34%), Positives = 97/188 (51%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG+EY RHN GFM +D + ++ K + ++E L G + IL+KP
Sbjct: 4 YLICGLGNPGNEYEGTRHNTGFMVLDALAKASNI-VFEDKRYGFVAEFTLKGRKIILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + LVI DD+ L G RLK G + GHNGL +I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENIEQ-SRLLVISDDVALPLGAFRLKGNGSNGGHNGLGNIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G+NY RLR+G+G + VLG+++ + L P ID + +
Sbjct: 122 IGQNYARLRMGVGNNYPRGGQVDWVLGHYTDEDMKELQPSIDLAGEIIKSFVLAGLDITM 181
Query: 182 NHIVSVRK 189
N + K
Sbjct: 182 NQYNKLGK 189
>gi|62263425|gb|AAX78159.1| unknown protein [synthetic construct]
Length = 226
Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GLGN G EY + RHN+G I +I + K + +++ +D +L+
Sbjct: 31 KMIIGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNPKLNCNLAKVSIDYNNVVLVF 90
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ +V NFYK+ E LV+HD+LD+D G +RLK GGG GHNGL+SI++
Sbjct: 91 PTTYMNNSGLAVSKVANFYKIAPAE-ILVVHDELDIDSGEIRLKKGGGHGGHNGLRSINQ 149
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y RLRIGIG P + + +VL N S ++ + IDN L + +
Sbjct: 150 HLGTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDNGICFLDDIINYKLEP 209
Query: 180 FLNHIVS 186
+ + +
Sbjct: 210 VMQKLHT 216
>gi|62389829|ref|YP_225231.1| peptidyl-tRNA hydrolase [Corynebacterium glutamicum ATCC 13032]
gi|24418600|sp|Q8NRV3|PTH1_CORGL RecName: Full=Peptidyl-tRNA hydrolase 1; Short=PTH 1
gi|21323704|dbj|BAB98331.1| Peptidyl-tRNA hydrolase [Corynebacterium glutamicum ATCC 13032]
gi|41325164|emb|CAF19645.1| PROBABLE PEPTIDYL-TRNA HYDROLASE PROTEIN [Corynebacterium
glutamicum ATCC 13032]
Length = 177
Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 104/175 (59%), Gaps = 10/175 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y RHNIGF + + S F K+ + +I+ QL G I+ K
Sbjct: 6 LLVVGLGNPGPKYVGTRHNIGFEVAEELVSRSFGSFSVHKRSNTDIA--QLPG--LIVAK 61
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG + + +F+K+ + N +V+HD+L+LDFG+++L+ GGGD GHNGLKS S+
Sbjct: 62 PRSFMNLSGTPIRALCDFFKI-SPANVIVVHDELELDFGSVKLRQGGGDHGHNGLKSTSK 120
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K+Y +L +GIGRPP VL F E + + A + L+ K
Sbjct: 121 SLGTKDYWKLSMGIGRPPGRMDPASFVLKPFGKQELADIPIM---AADAADLVEK 172
>gi|56707800|ref|YP_169696.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110670271|ref|YP_666828.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
FSC198]
gi|224456870|ref|ZP_03665343.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254370298|ref|ZP_04986303.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
FSC033]
gi|254874614|ref|ZP_05247324.1| pth, peptidyl-tRNA hydrolase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|68052885|sp|Q5NGZ6|PTH_FRATT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390942|sp|Q14IE8|PTH_FRAT1 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|54112801|gb|AAV29034.1| NT02FT1020 [synthetic construct]
gi|56604292|emb|CAG45313.1| Peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110320604|emb|CAL08696.1| Peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
FSC198]
gi|151568541|gb|EDN34195.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
FSC033]
gi|254840613|gb|EET19049.1| pth, peptidyl-tRNA hydrolase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282158974|gb|ADA78365.1| peptidyl-tRNA hydrolase [Francisella tularensis subsp. tularensis
NE061598]
Length = 191
Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GLGN G EY + RHN+G I +I + K + +++ +D +L+
Sbjct: 5 KMIIGLGNIGKEYQDTRHNVGEWFIAKIAQDNNQSFSSNPKLNCNLAKVSIDYNNVVLVF 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG ++ +V NFYK+ E LV+HD+LD+D G +RLK GGG GHNGL+SI++
Sbjct: 65 PTTYMNNSGLAVSKVANFYKIAPAE-ILVVHDELDIDSGEIRLKKGGGHGGHNGLRSINQ 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y RLRIGIG P + + +VL N S ++ + IDN L + +
Sbjct: 124 HLGTNDYLRLRIGIGHPGHKSKVANYVLSNPSIAQKKDIDSAIDNGICFLDDIINYKLEP 183
Query: 180 FLNHIVS 186
+ + +
Sbjct: 184 VMQKLHT 190
>gi|254282271|ref|ZP_04957239.1| peptidyl-tRNA hydrolase [gamma proteobacterium NOR51-B]
gi|219678474|gb|EED34823.1| peptidyl-tRNA hydrolase [gamma proteobacterium NOR51-B]
Length = 198
Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 64/189 (33%), Positives = 101/189 (53%), Gaps = 4/189 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY RHN G + + + + + KF + + G ++GL + P
Sbjct: 6 LIVGLGNPGSEYEGTRHNAGAFFVHALANRAGCRLSPESKFFGDTASGTINGLPLRFLIP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG+++ + +F+K+ N E L+ HD+LD+ G R K GGG GHNGL+ I
Sbjct: 66 TTFMNRSGKAVAAMAHFFKI-NPEEILIAHDELDIPPGQARFKHGGGHGGHNGLRDIIPA 124
Query: 122 CG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLR+GIG P + + +VL + +R + ID +LP L + V
Sbjct: 125 LGGSKDFYRLRVGIGHPGHASKVSGYVLRKPGAGDRDAIAASIDAAIEALPKLLAGDMVK 184
Query: 180 FLNHIVSVR 188
+ + S +
Sbjct: 185 AMTQLHSFQ 193
>gi|320094384|ref|ZP_08026170.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319978685|gb|EFW10242.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 200
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 9/193 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGL------- 54
++V GLGNPG +Y RHN+G + ID + + + +++ +L
Sbjct: 8 WLVVGLGNPGAQYASTRHNVGHLTIDVLAARAGAVLKTHRSRTRVADVRLGVGPGGVPGP 67
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L + +T+MN +G + + +F + + LV+HDDLDL LRLK GGG+ GHNG
Sbjct: 68 RAVLARSETYMNTTGGPIRRLADFLGI-GAQRILVVHDDLDLPPHELRLKAGGGEGGHNG 126
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
LKS+++ G ++Y RLRIGIGRPP +VL + ER ++ A ++ +
Sbjct: 127 LKSLTQALGTRDYHRLRIGIGRPPGRMDPADYVLAPIPAKERPDWDVTLEEAADAVEGVV 186
Query: 174 KREDVSFLNHIVS 186
+ +
Sbjct: 187 AEGFAPAQQALHT 199
>gi|28493618|ref|NP_787779.1| peptidyl-tRNA hydrolase [Tropheryma whipplei str. Twist]
gi|46576787|sp|Q83FR1|PTH_TROWT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|28476660|gb|AAO44748.1| peptidyl-tRNA hydrolase [Tropheryma whipplei str. Twist]
Length = 186
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 72/187 (38%), Positives = 100/187 (53%), Gaps = 9/187 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+IVAGLGNPG Y + RHN+G M +D + + K + L +L+KP
Sbjct: 4 YIVAGLGNPGPSYDKTRHNVGQMVLDILS--GGARFRRHKTNNFY----LSLGDILLVKP 57
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+MNLSG + +M F+ ++ + LV+HDD+DL GTLR K GGG AGH GL+SIS+
Sbjct: 58 DAYMNLSGPVIASLMKFH---SVSDLLVLHDDIDLPLGTLRFKQGGGTAGHRGLRSISDC 114
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G +Y RLR+GIGRP + I VL NFS + + I A ++ L V
Sbjct: 115 LGSDYARLRVGIGRPENNQSIEDFVLSNFSPVQTDIISRTIQLAAEAVLHLRDNGFVGVK 174
Query: 182 NHIVSVR 188
I +
Sbjct: 175 QFIAQTK 181
>gi|88801938|ref|ZP_01117466.1| peptidyl-tRNA hydrolase [Polaribacter irgensii 23-P]
gi|88782596|gb|EAR13773.1| peptidyl-tRNA hydrolase [Polaribacter irgensii 23-P]
Length = 195
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G Y RHNIGF +D + + H +K +I+ G L+KP
Sbjct: 11 FLIVGLGNIGDAYKNTRHNIGFKILDAVAAAHAVTFETEKL-GDIASFGFKGKSFTLLKP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++ M+ + +EN L++ DD+ +DFGT+R+K G GHNGL+ I EK
Sbjct: 70 STYMNLSGKAVKYWMDKENIA-IENILIVTDDVHIDFGTIRIKAKGTAGGHNGLRDIQEK 128
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+ Y R R G+G + VLG + E L+ + + ++ +
Sbjct: 129 LNTQEYSRFRFGVGANFARGRQVDFVLGEWDKEETSQLIERLPTSSNAITSFGTDGLANT 188
Query: 181 LN 182
+N
Sbjct: 189 MN 190
>gi|19552164|ref|NP_600166.1| peptidyl-tRNA hydrolase [Corynebacterium glutamicum ATCC 13032]
Length = 180
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 104/175 (59%), Gaps = 10/175 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG +Y RHNIGF + + S F K+ + +I+ QL G I+ K
Sbjct: 9 LLVVGLGNPGPKYVGTRHNIGFEVAEELVSRSFGSFSVHKRSNTDIA--QLPG--LIVAK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P++FMNLSG + + +F+K+ + N +V+HD+L+LDFG+++L+ GGGD GHNGLKS S+
Sbjct: 65 PRSFMNLSGTPIRALCDFFKI-SPANVIVVHDELELDFGSVKLRQGGGDHGHNGLKSTSK 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G K+Y +L +GIGRPP VL F E + + A + L+ K
Sbjct: 124 SLGTKDYWKLSMGIGRPPGRMDPASFVLKPFGKQELADIPIM---AADAADLVEK 175
>gi|332045042|gb|EGI81235.1| peptidyl-tRNA hydrolase [Lacinutrix algicola 5H-3-7-4]
Length = 211
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 94/185 (50%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGN G +Y RHNIGF +D +K +I+ +L G I +KP
Sbjct: 27 FLIVGLGNIGDKYENTRHNIGFKILDYFAKEESLTFETQKL-GDITTYKLKGRTFIFLKP 85
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG+++L + K+P LEN LVI DDL+L FG++R+KT G D GHNGLK +K
Sbjct: 86 NTYMNLSGKAILYWLTKEKIP-LENLLVITDDLNLPFGSIRVKTKGSDGGHNGLKDTQDK 144
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
N Y R R GI + +VLG ++ E L + + +
Sbjct: 145 LNTNKYNRYRFGISDAFTKGRQVDYVLGEWTEEENSKLEERLKKSIELIKSFGLAGINNT 204
Query: 181 LNHIV 185
+N
Sbjct: 205 MNTFN 209
>gi|297539289|ref|YP_003675058.1| peptidyl-tRNA hydrolase [Methylotenera sp. 301]
gi|297258636|gb|ADI30481.1| peptidyl-tRNA hydrolase [Methylotenera sp. 301]
Length = 192
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 71/189 (37%), Positives = 101/189 (53%), Gaps = 4/189 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y RHN GF ID + + + A KF + T L+K
Sbjct: 6 KLLVGLGNPGEKYTTTRHNAGFWWIDEVAAQTNSKLALDAKFFGVAGKL-ASKADTWLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ + N+YK+ E LVIHD+LDL G L+LK GGG GHNGLK I
Sbjct: 65 PTTFMNASGKSVAALANYYKITPAE-ILVIHDELDLPAGGLKLKVGGGHGGHNGLKDIET 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G K++ RLR+GIG P D ++ VL + E+ + + + + LL E S
Sbjct: 124 ALGTKDFWRLRLGIGHPGDRNEVVNFVLKAPTKDEQAAIDEKVYESTKLIDLLLAGEFES 183
Query: 180 FLNHIVSVR 188
+ + + +
Sbjct: 184 AMLKLHTKK 192
>gi|328469741|gb|EGF40663.1| peptidyl-tRNA hydrolase [Listeria monocytogenes 220]
Length = 163
Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
M +D + H P K KF+ SE + G + IL+KP TFMN SG+ + +M++Y +P
Sbjct: 1 MVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVKPLTFMNASGECIRPLMDYYNIP- 59
Query: 84 LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC-GKNYKRLRIGIGRPPDTAHI 142
+E+ ++++DDLDL G +RL+ G GHNG+KSI + + + R+R+G+ RP +
Sbjct: 60 IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQHVKTQEFNRIRVGVSRPL-KGEV 118
Query: 143 IRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVS 186
I +VLG+F E+ ++ I A ++ A+ + +N
Sbjct: 119 IHYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIEVMNKYNQ 162
>gi|297565116|ref|YP_003684088.1| peptidyl-tRNA hydrolase [Meiothermus silvanus DSM 9946]
gi|296849565|gb|ADH62580.1| peptidyl-tRNA hydrolase [Meiothermus silvanus DSM 9946]
Length = 195
Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 7/187 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ G GNPG +Y ++HN+G+ +D++ ++ + A I+E L + ++KP
Sbjct: 3 FLIVGQGNPGTQYLRSKHNVGWQVLDKL-----GLEFRIRGDAGIAELSLGDEKGWVMKP 57
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+ N +G+++ F+K+P E LV+HD+LDL G LR K GGG+AG+ GL+SI++
Sbjct: 58 ITYYNATGRAVAPFARFHKIPE-ERILVVHDELDLPLGKLRFKKGGGNAGNYGLESITQA 116
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + + RLRIGIG+P VL F + L +++ A + + V+
Sbjct: 117 LGSSAFHRLRIGIGKPKSPEEGASWVLSGFRPDQLPVLEKVLEAAAEGVKVWVVEGFVAA 176
Query: 181 LNHIVSV 187
+
Sbjct: 177 QQKFNGL 183
>gi|293189924|ref|ZP_06608604.1| aminoacyl-tRNA hydrolase [Actinomyces odontolyticus F0309]
gi|292821143|gb|EFF80090.1| aminoacyl-tRNA hydrolase [Actinomyces odontolyticus F0309]
Length = 200
Score = 192 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 9/193 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL-------DGL 54
++V GLGNPG +Y RHN+G++ +D + S + ++ +L G
Sbjct: 7 WLVVGLGNPGAQYAFTRHNVGYLTLDVLASRGGATLTSHRSRTHTADVRLGIGPGGVPGP 66
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R IL + ++MN SG + + F+K+ + LVIHDD+DL TLRLK GGG+ GHNG
Sbjct: 67 RVILARSDSYMNTSGGPISALATFHKI-DPSRILVIHDDMDLPAHTLRLKVGGGEGGHNG 125
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
LKS+S+ G ++Y RLRIG+GRPP +VL S ER + A + +
Sbjct: 126 LKSLSQHLGTRDYARLRIGVGRPPGRMDPADYVLATLPSKERPEWDVTFEQAADVVEDIV 185
Query: 174 KREDVSFLNHIVS 186
+ + +
Sbjct: 186 TKGFAPTQMALHT 198
>gi|327542673|gb|EGF29144.1| peptidyl-tRNA hydrolase [Rhodopirellula baltica WH47]
Length = 167
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 54/165 (32%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
M D + + KF EISE +++ + +++ P T+MN SGQS+ + M+FYKL +
Sbjct: 1 MVADALVRRYVGSPPTTKFEGEISECRIENEKVLVLCPHTYMNASGQSVRKAMDFYKL-S 59
Query: 84 LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN-YKRLRIGIGRPPDTAHI 142
E+ LVI DDL+L+ G +RL+ G G GL I G + RL+IGIGRPP +
Sbjct: 60 PEDILVICDDLNLETGRVRLRRSGSAGGQKGLVDIIRHLGSEQWARLKIGIGRPPAKWQV 119
Query: 143 IRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVSV 187
+VLG F E + I + + +N +
Sbjct: 120 SDYVLGKFDKTELEEMEHAIVHSCDATACWVADGVTEAMNRYNAA 164
>gi|269115196|ref|YP_003302959.1| Peptidyl-tRNA hydrolase [Mycoplasma hominis]
gi|268322821|emb|CAX37556.1| Peptidyl-tRNA hydrolase [Mycoplasma hominis ATCC 23114]
Length = 186
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY + RHN GFM ID++ P +KKF+ IL K
Sbjct: 1 MKLIVGLGNPGVEYEKTRHNTGFMVIDKLAEKLHTPLTEKKFNGIYYI----DKEVILAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + + ++Y + + + +V DLDL G ++ G GHNG+K I
Sbjct: 57 PLTFMNNSGDFVRAIKDYYNIVDDDIIIVYD-DLDLPVGKAVIRQKGSSGGHNGMKDIIA 115
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K + KRL+IGIGR ++I +VLG FS + + IID + +L +
Sbjct: 116 KLKTDEIKRLKIGIGR---GQNVINYVLGKFSYQDFCTIEKIIDIASDALISFISNDIRF 172
Query: 180 FLNH 183
+N
Sbjct: 173 VMNK 176
>gi|154507724|ref|ZP_02043366.1| hypothetical protein ACTODO_00206 [Actinomyces odontolyticus ATCC
17982]
gi|153797358|gb|EDN79778.1| hypothetical protein ACTODO_00206 [Actinomyces odontolyticus ATCC
17982]
Length = 200
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 9/193 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL-------DGL 54
++V GLGNPG +Y RHN+G++ +D + S + ++ +L G
Sbjct: 7 WLVVGLGNPGAQYAFTRHNVGYLTLDVLASRGGATLTSHRSRTHTADVRLGIGPGGVPGP 66
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R IL + ++MN SG + + F+K+ + LVIHDD+DL TLRLK GGG+ GHNG
Sbjct: 67 RVILARSDSYMNTSGGPISALATFHKI-DPSRILVIHDDMDLPAHTLRLKVGGGEGGHNG 125
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
LKS+S+ G ++Y RLRIG+GRPP +VL S ER + A + +
Sbjct: 126 LKSLSQHLGTRDYARLRIGVGRPPGRMDPADYVLATLPSKERSEWDVTFEQAADVVEDIV 185
Query: 174 KREDVSFLNHIVS 186
+ + +
Sbjct: 186 TKGFAPTQMALHT 198
>gi|254495953|ref|ZP_05108861.1| peptidyl-tRNA hydrolase [Legionella drancourtii LLAP12]
gi|254354831|gb|EET13458.1| peptidyl-tRNA hydrolase [Legionella drancourtii LLAP12]
Length = 191
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG Y RHN G + H +KK AE++E +L+ L+
Sbjct: 6 KLIIGLRNPGSAYEHTRHNAGGWLTAALAQRHSTSFKLEKKMQAELAELKLNNHTGKLVL 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQ + FY++ E LV+HD+LDL G ++LKTGGG GHNGL+ I
Sbjct: 66 PLTFMNHSGQPTRLISQFYRI-QPEEILVVHDELDLPAGRIKLKTGGGHGGHNGLRDIIA 124
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G ++ RLRIGIG P + ++VLG S+ +R + ID +PL+ +
Sbjct: 125 QLGSPHFHRLRIGIGHPGHKDLVHQYVLGKPSAHDRQQIYDAIDRGIAVMPLVFSGDLAR 184
Query: 180 FLNHIV 185
+N +
Sbjct: 185 AMNQLN 190
>gi|300781629|ref|ZP_07091483.1| aminoacyl-tRNA hydrolase [Corynebacterium genitalium ATCC 33030]
gi|300533336|gb|EFK54397.1| aminoacyl-tRNA hydrolase [Corynebacterium genitalium ATCC 33030]
Length = 213
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 16/192 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMC----IDRIHSFHFFPAWKKKFHAEISEGQLDGLRTI 57
++V GLGNPG Y +HN+G+M +D++ + P K +++G
Sbjct: 27 WLVVGLGNPGARYDATKHNVGYMVQDILLDQVAAT-LAPLNGHKVTVAVADG------VA 79
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
+ TFMNLSG+ + + + ++ +V+HD+LDL G +R+K GG + GHNGLKS
Sbjct: 80 YARSTTFMNLSGEGIAPLARELGITP-DHVVVLHDELDLPPGKVRIKLGGNENGHNGLKS 138
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSP---ERYFLLPIIDNIARSLPLLA 173
++E G ++Y R+RIGIGRPP + VL + E L ++ A + ++
Sbjct: 139 LTEHLGTRDYVRIRIGIGRPPKGMPVPEWVLSSLPQDSEHEEKALTEQLELTAEAAGIVV 198
Query: 174 KREDVSFLNHIV 185
K N I
Sbjct: 199 KHGVQRAQNEIH 210
>gi|300858116|ref|YP_003783099.1| peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis FRC41]
gi|300685570|gb|ADK28492.1| Peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis FRC41]
gi|302205837|gb|ADL10179.1| Peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis C231]
gi|302330395|gb|ADL20589.1| Peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis 1002]
gi|308276072|gb|ADO25971.1| Peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis I19]
Length = 217
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 17/193 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH------SFHFFPAWKKKFHAEISEGQLDGLR 55
+IV GLGNP ++Y NRHN+G+M +D + P + + +++
Sbjct: 35 WIVIGLGNPDNKYARNRHNVGYMAVDALLGDVPLIQRRGLPVRE-------ARLRINQHE 87
Query: 56 TILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
+++ T+MN SG+++ + Y + ++ +++HD+LDL GT+R+K GG + GHNGL
Sbjct: 88 VAVLRSTTYMNNSGEAIAPIAEEYGIA-ADHIIILHDELDLPHGTVRIKKGGNENGHNGL 146
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
KS S ++Y R+R+GI RPP + +VLG+ E L +I ++ L+
Sbjct: 147 KSSSALLNTRDYLRIRMGISRPPQGMSVPDYVLGDIEHDE--ALDSMISRSTEAVRLIVT 204
Query: 175 REDVSFLNHIVSV 187
N I S
Sbjct: 205 EGIARAQNTIHSA 217
>gi|303288600|ref|XP_003063588.1| peptidyl-tRNA hydrolase [Micromonas pusilla CCMP1545]
gi|226454656|gb|EEH51961.1| peptidyl-tRNA hydrolase [Micromonas pusilla CCMP1545]
Length = 257
Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 107/193 (55%), Gaps = 7/193 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++V GLGNPG ++ RHN GF + + S H K + I+ G++ + +L
Sbjct: 41 WLVVGLGNPGSKFTRTRHNAGFDAVSLLASAHGMSFTGALKHRSMIATGKIANVPVVLAM 100
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTFMNLSG+++ +V+ +YK+ + + LV++DD+D G ++LK GG GHNG+++I +
Sbjct: 101 PQTFMNLSGEAIRDVLRWYKI-SPKRMLVLYDDMDSPVGVVKLKGKGGHGGHNGVRNIID 159
Query: 121 KCG---KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL--PIIDNIARSLPLLAKR 175
+ K + R++IGIGRP +I HVL F++ ER L ++ ++ +
Sbjct: 160 EVTRGEKTFARVKIGIGRPAAGVSVIDHVLRRFTAEEREALERGEVMREAGDAVVAVLTD 219
Query: 176 EDVSFLNHIVSVR 188
+ + + +
Sbjct: 220 GLEKAMTRVNNKK 232
>gi|241668370|ref|ZP_04755948.1| peptidyl-tRNA hydrolase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876903|ref|ZP_05249613.1| peptidyl-tRNA hydrolase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842924|gb|EET21338.1| peptidyl-tRNA hydrolase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 191
Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 69/187 (36%), Positives = 103/187 (55%), Gaps = 3/187 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGN G EY RHN+G I +I + + K + I++ ++ IL+
Sbjct: 5 KMIVGLGNIGKEYENTRHNVGEWFIAKIAKDNNENFSLNSKLNCNIAKVNINYNNIILVF 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ +V NFYK+ E LV+HD+LD+D G +RLK GGG GHNGL+SI +
Sbjct: 65 PTTFMNNSGLAVSKVANFYKIEP-EEILVVHDELDIDSGEIRLKKGGGHGGHNGLRSIHQ 123
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G +Y RLRIGIG P + + +VL N S ++ + IDN L + +
Sbjct: 124 HLGTNDYLRLRIGIGHPGHKSKVSNYVLSNPSVAQKNDIDNAIDNGICVLDDIINYKLEP 183
Query: 180 FLNHIVS 186
+ + +
Sbjct: 184 TMLRLHT 190
>gi|256824232|ref|YP_003148192.1| peptidyl-tRNA hydrolase [Kytococcus sedentarius DSM 20547]
gi|256687625|gb|ACV05427.1| peptidyl-tRNA hydrolase [Kytococcus sedentarius DSM 20547]
Length = 202
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 113/196 (57%), Gaps = 10/196 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLD-------G 53
++VAGLGNPG Y NRHN+G M + + + + ++ A +E +L G
Sbjct: 8 WLVAGLGNPGPRYAGNRHNVGAMVVAEMAAGAGVKLSAARQARAVSAETRLGTLPGGRPG 67
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
R +L P FMNLSG + +M ++ + ++++ +V+HD+LD+DFG +RLK GGG+ GHN
Sbjct: 68 RRVVLATPLDFMNLSGGPVSGLMKYHGI-DVDHLVVLHDELDIDFGAVRLKKGGGEGGHN 126
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GL+SI++ G K+Y R+R+GIGRPP + VL +FS ER L ++ + A ++ L
Sbjct: 127 GLRSITQSLGTKDYHRIRLGIGRPPGRMDVADFVLRDFSPTERAELPFLLGDGADAVERL 186
Query: 173 AKREDVSFLNHIVSVR 188
+ S R
Sbjct: 187 LHHGLEAAQQFHHSPR 202
>gi|283955210|ref|ZP_06372711.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 414]
gi|283793247|gb|EFC32015.1| peptidyl-tRNA hydrolase [Campylobacter jejuni subsp. jejuni 414]
Length = 181
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 77/189 (40%), Positives = 108/189 (57%), Gaps = 10/189 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILI 59
M +V GLGN G EY RHN+GFM ID + + KF E+ + L
Sbjct: 1 MILVVGLGNIGAEYENTRHNVGFMLIDLLLKENNSINLTNSKFKGELFKISSSLLLL--- 57
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG S+ V +FYK E +VIHDD+D++ G LR K GG GHNGLKSI
Sbjct: 58 KPSTYMNNSGLSVKAVNDFYKC---ERIIVIHDDIDINLGALRFKKGGSSGGHNGLKSID 114
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
CG +Y+R+RIG+G+ ++I HVLG F S E L +++N +L L + +D+S
Sbjct: 115 SLCGSDYERVRIGVGK---GENVISHVLGKFKSEEEIILSKVLENAKEALLELIRNDDLS 171
Query: 180 FLNHIVSVR 188
++ S++
Sbjct: 172 AISSKYSLK 180
>gi|84497835|ref|ZP_00996632.1| peptidyl-tRNA hydrolase [Janibacter sp. HTCC2649]
gi|84381335|gb|EAP97218.1| peptidyl-tRNA hydrolase [Janibacter sp. HTCC2649]
Length = 196
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 9/192 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT------ 56
+V GLGNPG Y NRHN+G M ID + S K A ++ ++
Sbjct: 1 MVVGLGNPGPTYAGNRHNVGAMVIDELASRTKSALRTHKARAVAAQVRIGTGPGGVPGPS 60
Query: 57 -ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
++ P ++MN SG + +M F+ + + +VIHD+LD+ G +RLK GGG+ GHNGL
Sbjct: 61 AVIAVPGSYMNESGGPVKALMGFFSVEP-DRLVVIHDELDIPAGDVRLKLGGGEGGHNGL 119
Query: 116 KSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+SIS+ G K+Y R+R+GIGRPP VL +FS ER L ++ + A ++ +L
Sbjct: 120 RSISKSLGTKDYLRVRVGIGRPPGRQDAADFVLKDFSPVERKELPFLLGDAADAVEMLVT 179
Query: 175 REDVSFLNHIVS 186
+ +
Sbjct: 180 HGLLDTQQKFHA 191
>gi|304382453|ref|ZP_07364951.1| aminoacyl-tRNA hydrolase [Prevotella marshii DSM 16973]
gi|304336406|gb|EFM02644.1| aminoacyl-tRNA hydrolase [Prevotella marshii DSM 16973]
Length = 189
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 72/185 (38%), Positives = 95/185 (51%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY E RHN GFM +D ++ + + I+E + G + IL+KP
Sbjct: 4 YLIVGLGNPGIEYEETRHNTGFMILDAFAKASN-SVFEDRRYGYIAETSVKGRKLILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ MN + L LVI DDL L G LRLK G + GHNGL +I
Sbjct: 63 TTFMNLSGNAVRYWMNKEHI-ELSRLLVISDDLSLPLGILRLKGNGSNGGHNGLGNIQSV 121
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + Y RLR+GIG I VLG +S E LLP I+ + A
Sbjct: 122 LGTQQYARLRVGIGNDFPRGMQIDWVLGKYSHEEMETLLPRIETAGELIKSFALSGLDVT 181
Query: 181 LNHIV 185
+N
Sbjct: 182 MNQYN 186
>gi|195953329|ref|YP_002121619.1| peptidyl-tRNA hydrolase [Hydrogenobaculum sp. Y04AAS1]
gi|259535199|sp|B4U930|PTH_HYDS0 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|195932941|gb|ACG57641.1| Aminoacyl-tRNA hydrolase [Hydrogenobaculum sp. Y04AAS1]
Length = 188
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 4/184 (2%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
+ GLGNPG +Y + +HNIGF ID + +K+ + + + LIKPQT
Sbjct: 5 LVGLGNPGPKYKDTKHNIGFKVIDEVAFKLHLKNPLEKYMSIV--FHIKEQDIYLIKPQT 62
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC- 122
FMN SG +L + + K+ + LVI+DD+DL GT+++K GG GHNG++SI +
Sbjct: 63 FMNNSGIALRQFVEKTKIAP-SDILVIYDDMDLPIGTIKMKPNGGSGGHNGVESIIRELR 121
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
+ + RLRIGIGRP + +VL F + + I+ + + +
Sbjct: 122 TQEFPRLRIGIGRPASKEEVTNYVLSPFEYKDTPIVKKTIEKASEYAIRSLEEPLEYVMT 181
Query: 183 HIVS 186
+
Sbjct: 182 LCNT 185
>gi|225023012|ref|ZP_03712204.1| hypothetical protein CORMATOL_03060 [Corynebacterium matruchotii
ATCC 33806]
gi|224944235|gb|EEG25444.1| hypothetical protein CORMATOL_03060 [Corynebacterium matruchotii
ATCC 33806]
Length = 194
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 60/185 (32%), Positives = 105/185 (56%), Gaps = 9/185 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG++Y RHN+G+ +DR+ K I + +L++
Sbjct: 18 WLVIGLGNPGNQYVATRHNVGYRVVDRLLKDTPLHPIKG-----IPATAANVGDMLLVRS 72
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+++ + + + + +L++ +VIHD+LDL GT+R+K GG + GHNGLKS + +
Sbjct: 73 TTYMNDSGRAIAPLADAFAI-DLDHIIVIHDELDLPLGTVRIKRGGNENGHNGLKSATAE 131
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y R+R+GI RPP ++ +VL + PE + A+++ L+ + +
Sbjct: 132 LGSRDYIRVRVGISRPPQGTPVVDYVLS--ALPEGPDTDDALARAAQAVTLITTKGVSAA 189
Query: 181 LNHIV 185
N I
Sbjct: 190 QNQIH 194
>gi|302336342|ref|YP_003801549.1| peptidyl-tRNA hydrolase [Olsenella uli DSM 7084]
gi|301320182|gb|ADK68669.1| peptidyl-tRNA hydrolase [Olsenella uli DSM 7084]
Length = 197
Score = 190 bits (485), Expect = 5e-47, Method: Composition-based stats.
Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 7/189 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLR-----T 56
+V GLGNPG Y RHN GF +D + WK + ++ G
Sbjct: 9 LLVCGLGNPGDAYEHTRHNAGFAVVDALAERGCVSYWKSEAGCLVASWGRRGPDGRTRTV 68
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L KPQ +MN+SG L ++M + + + LV+HD++DL G +R+K+GGG HNGL+
Sbjct: 69 LLAKPQAYMNVSGGPLSKLMRQRGI-SAQEVLVVHDEVDLPSGVVRVKSGGGLNAHNGLR 127
Query: 117 SISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
SI++K G +++ R+R GIGRPP + L A + L +
Sbjct: 128 SIADKLGTRDFARVRCGIGRPPGRMSVADFALRQLKGSFLADFELGAQRAADACELCLDQ 187
Query: 176 EDVSFLNHI 184
+ +
Sbjct: 188 GVARAVEQL 196
>gi|62422026|gb|AAX82595.1| putative peptidyl-tRNA hydrolase [Lactobacillus reuteri]
Length = 186
Score = 190 bits (485), Expect = 5e-47, Method: Composition-based stats.
Identities = 66/188 (35%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGN G Y E RHN GFM +D++ +H K A G ++G + +L+
Sbjct: 1 MKMIVGLGNIGTRYDETRHNTGFMVVDQLARDYHLGAFTHLKQEAVAVSGVINGEKVMLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMN SG++ ++++Y + + +V +DDLD+ G +RLKT G G NGLKSI
Sbjct: 61 KPTTFMNDSGRAGGPLVDYYDIDLDDLVIV-NDDLDMPGGKVRLKTHGASGGDNGLKSII 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-D 177
G KN+ R++ GI P + HVLG FS ER + +L E
Sbjct: 120 SALGTKNFNRVKGGIDHPQH-GTVGSHVLGEFSKEERAKFDQAGEQAEHALEDWINGENF 178
Query: 178 VSFLNHIV 185
+N
Sbjct: 179 AKLMNAYN 186
>gi|294055119|ref|YP_003548777.1| peptidyl-tRNA hydrolase [Coraliomargarita akajimensis DSM 45221]
gi|293614452|gb|ADE54607.1| peptidyl-tRNA hydrolase [Coraliomargarita akajimensis DSM 45221]
Length = 200
Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats.
Identities = 64/186 (34%), Positives = 97/186 (52%), Gaps = 5/186 (2%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIKP 61
+AGLGNPG Y RHNIGF +D++ WK+ + AEI+ + +L+KP
Sbjct: 6 IAGLGNPGLGYRNTRHNIGFDVVDQLALRAGAG-WKREARLDAEIAAIHHAERKIMLVKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+SL V+ + +L N L+I+DD+ L G +L G GHNG+ I ++
Sbjct: 65 TTYMNGSGRSLAAVLRYRQLEP-RNLLIIYDDITLTLGRAKLSHSGSAGGHNGVSDILDR 123
Query: 122 CGKNYKRLRIGIGRPPDT-AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + R RIGIG P+ + +VL FS+ E+ L + + L L+ +
Sbjct: 124 VGGGFNRYRIGIGAKPNKEMDLADYVLSKFSNDEKSLLADRMPSFLEHLALILEEGIDPA 183
Query: 181 LNHIVS 186
+N I
Sbjct: 184 MNIINQ 189
>gi|296128742|ref|YP_003635992.1| peptidyl-tRNA hydrolase [Cellulomonas flavigena DSM 20109]
gi|296020557|gb|ADG73793.1| peptidyl-tRNA hydrolase [Cellulomonas flavigena DSM 20109]
Length = 206
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE------------- 48
++V GLGNPG +Y NRHN+G M +D + P + + +
Sbjct: 6 WLVVGLGNPGPQYAGNRHNVGQMVLDELSRRTGAP-FVSRGGGLLGRRPQAATADARLGT 64
Query: 49 --GQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTG 106
G + G R +L KP T+MN+SG + + ++ +P +V+HD+LD+ F +RLK G
Sbjct: 65 LPGGVPGPRVVLAKPSTYMNVSGGPVAALARYHDVPVERV-VVVHDELDIPFADVRLKRG 123
Query: 107 GGDAGHNGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
GG+ GHNGL+ S+ G K+Y R+R+G+GRPP VL +FS PER L ++D
Sbjct: 124 GGEGGHNGLRDTSKALGSKDYVRVRVGVGRPPGRQDPADFVLKDFSGPERKDLPWLVDRA 183
Query: 166 ARSLPLLAKREDVSFLNHIVS 186
A ++ + + +
Sbjct: 184 ADAVEAVVIEGLEAAQLRFHT 204
>gi|317502722|ref|ZP_07960833.1| aminoacyl-tRNA hydrolase [Prevotella salivae DSM 15606]
gi|315666166|gb|EFV05722.1| aminoacyl-tRNA hydrolase [Prevotella salivae DSM 15606]
Length = 190
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 69/188 (36%), Positives = 94/188 (50%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG EY E RHN GFM +D ++ K + I+E L G + IL+KP
Sbjct: 4 FLICGLGNPGDEYQETRHNTGFMVLDAFAKASNI-HFEDKRYGFIAETTLKGRKLILLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ +N + LVI DD+ L G RLK G + GHNGL I +
Sbjct: 63 TTFMNLSGNAVRYWLNKENIDQ-SRLLVISDDIALPLGAFRLKANGNNGGHNGLGHIQQL 121
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G NY RLR+GIG + VLG + ++ L P I+ + A +
Sbjct: 122 IGTNYARLRMGIGNDYPKGGQVDWVLGKYDDNDKTILQPSINIACDIIKSFALAGIDITM 181
Query: 182 NHIVSVRK 189
N + K
Sbjct: 182 NQFNKLGK 189
>gi|301060861|ref|ZP_07201670.1| aminoacyl-tRNA hydrolase [delta proteobacterium NaphS2]
gi|300445035|gb|EFK08991.1| aminoacyl-tRNA hydrolase [delta proteobacterium NaphS2]
Length = 191
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 63/186 (33%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG Y RHN+G +++ +F ++ + G + IL+
Sbjct: 1 MYLIAGLGNPGPPYEHTRHNVGLKSVEQWGKSLGATLRNGRFCSKHALVNFRGTKIILLC 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+S+ + +++Y L L+ LVIHDDLDL G +++ GG GH G+ SI E
Sbjct: 61 PLTFMNRSGESVGDCLHYYDLA-LDRLLVIHDDLDLPLGRIKVIKHGGAGGHKGVLSIIE 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G + R++IGIGRP I +VL +F E+ +I + + +
Sbjct: 120 ILGSSEFSRVKIGIGRPCHGEPIADYVLSDFYDNEKKLAENVIRTAIDAAEMFVLEGVQT 179
Query: 180 FLNHIV 185
+NHI
Sbjct: 180 AMNHIN 185
>gi|304373320|ref|YP_003856529.1| Peptidyl-tRNA hydrolase [Mycoplasma hyorhinis HUB-1]
gi|304309511|gb|ADM21991.1| Peptidyl-tRNA hydrolase [Mycoplasma hyorhinis HUB-1]
gi|330723803|gb|AEC46173.1| peptidyl-tRNA hydrolase [Mycoplasma hyorhinis MCLD]
Length = 191
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 9/186 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +HN+GF ID++ + I + IL K
Sbjct: 1 MKLIVGLGNPGPQYELTKHNVGFRVIDKLAQSLKTDFINWRSIGLI----IKTQDYILAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG + E++ FYK+ N+++ L+++DD+D + G ++T G AGHNGLK I
Sbjct: 57 PLTYMNQSGLLVSELVKFYKI-NIDDILIVYDDMDFNVGQAIMRTNGSSAGHNGLKDIFR 115
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ KRL+IGI R ++ +VL F + + +ID+ A L +
Sbjct: 116 MLQTQEIKRLKIGISRDKNS---KNYVLTPFDPIQEAIIKKVIDDCADILLYYLYNDFRK 172
Query: 180 FLNHIV 185
+
Sbjct: 173 AIEKFN 178
>gi|260906160|ref|ZP_05914482.1| peptidyl-tRNA hydrolase [Brevibacterium linens BL2]
Length = 199
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 10/194 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL--------DG 53
++V GLGNPG +Y RHNIG M I + + K + + +L G
Sbjct: 6 WLVFGLGNPGPKYETTRHNIGQMVIAELAHRIGVNLTRTKLRSNVGTSRLPTGSIPGVPG 65
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
R +L +MN SG + ++ +FY + + + + +HDD+D+ + T++ K GGG+ GHN
Sbjct: 66 PRVVLATSTGYMNESGGPVRQLADFYSI-DTDRIIAVHDDVDIPYDTIKAKVGGGEGGHN 124
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GL+S++ G KNY R+R G+GRP +VL FS ER L I +IA ++ +
Sbjct: 125 GLRSMTSALGTKNYPRIRAGVGRPLGRQDTADYVLKPFSKDERATLPIFISDIADAVEMY 184
Query: 173 AKREDVSFLNHIVS 186
S
Sbjct: 185 IVEGLEKVQLKYHS 198
>gi|38233493|ref|NP_939260.1| peptidyl-tRNA hydrolase [Corynebacterium diphtheriae NCTC 13129]
gi|38199753|emb|CAE49413.1| Putative peptidyl tRNA hydrolase [Corynebacterium diphtheriae]
Length = 180
Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats.
Identities = 64/182 (35%), Positives = 104/182 (57%), Gaps = 7/182 (3%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTF 64
GLGNPG Y RHN+G+M +D + P + F A + ++ G R ++++ TF
Sbjct: 2 GLGNPGVRYASTRHNVGYMVVDELLGPAELRPL--RGFKASGAVIEVGGCRVLVVRSSTF 59
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG- 123
MN SG+++ ++ Y + + ++ +V+HD+LDL +R+K GG + GHNGLKS+S+ G
Sbjct: 60 MNTSGEAVGPIVQEYGV-SPDHVVVVHDELDLPAHKVRVKVGGNENGHNGLKSVSQWLGT 118
Query: 124 KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNH 183
++Y R+R+GIGRPP + +VLG S E L + A ++ L+ +R N
Sbjct: 119 RDYVRIRVGIGRPPRGGTVPDYVLGALDSGE--VLDAAVRCGADAIRLVIERGVSVAQNE 176
Query: 184 IV 185
I
Sbjct: 177 IH 178
>gi|305681954|ref|ZP_07404758.1| aminoacyl-tRNA hydrolase [Corynebacterium matruchotii ATCC 14266]
gi|305658427|gb|EFM47930.1| aminoacyl-tRNA hydrolase [Corynebacterium matruchotii ATCC 14266]
Length = 194
Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats.
Identities = 60/185 (32%), Positives = 105/185 (56%), Gaps = 9/185 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++V GLGNPG++Y RHN+G+ +DR+ K I + +L++
Sbjct: 18 WLVIGLGNPGNQYVATRHNVGYRVVDRLLKDTPLHPIKG-----IPATAANVGDMLLVRS 72
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+++ + + + + +L++ +VIHD+LDL GT+R+K GG + GHNGLKS + +
Sbjct: 73 TTYMNDSGRAIAPLADAFAM-DLDHIIVIHDELDLPLGTVRIKRGGNENGHNGLKSATAE 131
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++Y R+R+GI RPP ++ +VL + PE + A+++ L+ + +
Sbjct: 132 LGSRDYIRVRVGISRPPQGTPVVDYVLS--ALPEGPDTDDALARAAQAVTLITTKGVSAA 189
Query: 181 LNHIV 185
N I
Sbjct: 190 QNQIH 194
>gi|305682090|ref|ZP_07404894.1| putative peptidyl-tRNA hydrolase [Corynebacterium matruchotii ATCC
14266]
gi|305658563|gb|EFM48066.1| putative peptidyl-tRNA hydrolase [Corynebacterium matruchotii ATCC
14266]
Length = 173
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 65/174 (37%), Positives = 98/174 (56%), Gaps = 5/174 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
MF++ GLGNPG +Y RHN G M + + A++++ A ++E L R +
Sbjct: 1 MFLIVGLGNPGAKYERTRHNSGVMALTELA---GAVAFRRRGSALVTESWLADHRVVFAI 57
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQ FMN+SG + EV F+K+P + +V+ DDL+L+FGT+RL G GHNGL+SI++
Sbjct: 58 PQRFMNVSGGPVKEVAGFFKIPP-QRTIVLFDDLELEFGTIRLPVLGDH-GHNGLRSITK 115
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
G +Y R +GIGRPP + VL F+ ER L + ++A +
Sbjct: 116 VFGADYVRAGLGIGRPPGRMPVADFVLKPFTKAERPQLPIMWADMADEVTRFIT 169
>gi|326433418|gb|EGD78988.1| peptidyl-tRNA hydrolase [Salpingoeca sp. ATCC 50818]
Length = 387
Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 27/209 (12%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIKPQ 62
GLGNPG Y RHN+GFM +D + + K +K A + G++ ++KP
Sbjct: 172 WVGLGNPGSAYKHTRHNLGFMALDAVAAAKSLTWTKDRKCKAMTCSFETGGVKVHMLKPL 231
Query: 63 TFMNLSGQSLLEVMNFYKLPNLEN-----------------YLVIHDDLDLDFGTLRLKT 105
T+MNLSG ++ + + K L + DDLD G ++LK
Sbjct: 232 TYMNLSGDAVRSFLRYAKPLANAETAQSKTGGGGSAAAARCVLAVCDDLDQPLGRMKLKL 291
Query: 106 GGGDAGHNGLKSISEKC-GKNYKRLRIGIGRP------PDTAHIIRHVLGNFSSPERYFL 158
G GHNGL+SI ++ + Y RLR+GIG P + VL +F+S E+ L
Sbjct: 292 KGSAGGHNGLRSIEQRLASQEYMRLRLGIG-PMAGRTTTAKRAVQDFVLTHFASDEQDAL 350
Query: 159 LPIIDNIARSLPLLAKRED-VSFLNHIVS 186
++ + +L LL + + + I
Sbjct: 351 ERVVAHARDALLLLTRENNLDKCMTAIND 379
>gi|224052914|ref|XP_002297633.1| predicted protein [Populus trichocarpa]
gi|222844891|gb|EEE82438.1| predicted protein [Populus trichocarpa]
Length = 210
Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG ++ RHN + A EG + +L KP
Sbjct: 23 WLFVGLGNPGEKFKGTRHNA------------WISMNIPLCKALFGEGFVGDAPVLLAKP 70
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MNLSG+S + +YKLP L +V HDD++L G LRL+ GG H GLKS+
Sbjct: 71 QTYMNLSGESAGPLAAYYKLP-LNRVIVFHDDMELPCGVLRLQEKGGHGCHRGLKSVINH 129
Query: 122 C--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
+ + RLRIGIGRPP +L F++ R + + +L +
Sbjct: 130 FRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATARERIDAALPEGVVALRCIL 183
>gi|302336814|ref|YP_003802020.1| peptidyl-tRNA hydrolase [Spirochaeta smaragdinae DSM 11293]
gi|301633999|gb|ADK79426.1| peptidyl-tRNA hydrolase [Spirochaeta smaragdinae DSM 11293]
Length = 193
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 67/179 (37%), Positives = 99/179 (55%), Gaps = 6/179 (3%)
Query: 5 AGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTF 64
LGNPG Y + RHN+ +M + I ++KKFH ++ + R +L+ P+T+
Sbjct: 8 VFLGNPGKMYAKTRHNLAWMAAEAI-PSIVDLRFQKKFHGRWADIKTGTYREVLLFPETY 66
Query: 65 MNLSGQSLLEVMNFYKLPNL---ENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
MN SG S+ +F+K+ N LV+HD+++L FGT+ LK GGG AGHNGL+SI+++
Sbjct: 67 MNKSGDSVSSACSFFKIDPKKEGSNLLVVHDEIELPFGTIELKRGGGTAGHNGLRSINQQ 126
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++ RLR+G+GRPP + VL FS E L + A L L S
Sbjct: 127 TGSSDFLRLRLGVGRPP-RGTVSSWVLSRFSEDEELLLPKYLKRTAPFLEKLFTEGHAS 184
>gi|227432634|ref|ZP_03914610.1| peptidyl-tRNA hydrolase [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
gi|227351604|gb|EEJ41854.1| peptidyl-tRNA hydrolase [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
Length = 193
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 54/179 (30%), Positives = 98/179 (54%), Gaps = 3/179 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGN G EY + RHNIGFM +D + + K A +++ + G +L+KP
Sbjct: 7 KFIFGLGNIGAEYDQTRHNIGFMAVDAFATANHMSFSPSKQFALVAKTIIGGESVMLVKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+++ ++++Y + +++ D+DL FG +R + G GHNGLKSI
Sbjct: 67 TTYMNNSGKAVRAILDYYDGDVDDVLVLVD-DMDLPFGKMRFRAKGSAGGHNGLKSIMTH 125
Query: 122 CG-KNYKRLRIGIGRPPDTAH-IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
G + + RL+ G+G P + ++ +VLG F++ E+ + ++D +++ +
Sbjct: 126 TGSQTFLRLKFGLGHPVHEQNVVVNYVLGKFTAAEKPDIDAMLDRSTQAIADWIQGATA 184
>gi|257068517|ref|YP_003154772.1| peptidyl-tRNA hydrolase [Brachybacterium faecium DSM 4810]
gi|256559335|gb|ACU85182.1| peptidyl-tRNA hydrolase [Brachybacterium faecium DSM 4810]
Length = 204
Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 99/191 (51%), Gaps = 7/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEIS-EGQLDG----LRT 56
++V GLGNPG Y RHNIG M +D I + + EG+L R
Sbjct: 11 YLVVGLGNPGPRYAATRHNIGQMVLDHIADAGGGRFAAARRAQAVVLEGRLGNPGADERV 70
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
IL K TFMN+SG + + +Y +P + +HD++D+ F +RLK GGG+ GHNGL+
Sbjct: 71 ILAKTTTFMNVSGGPVKALAAYYDIPPA-RVVAVHDEVDIPFDAVRLKLGGGEGGHNGLR 129
Query: 117 SISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
I++ G K+Y R+R+G+GRP HVL FS+ ER L ++ + A ++ L
Sbjct: 130 DITKALGTKDYLRVRVGVGRPTGGRDTADHVLAPFSATERKSLDLLVADAADAVESLILE 189
Query: 176 EDVSFLNHIVS 186
+ S
Sbjct: 190 GLTTAQQRFHS 200
>gi|68052960|sp|Q6KHA3|PTH_MYCMO RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 179
Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 9/186 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP +Y +NRHN+G+M +D+I K+KF + I+ K
Sbjct: 1 MKLIIGLGNPDPKYQKNRHNVGYMVVDKILENLRLKINKEKFSGIFVKT----EEFIIAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG + + ++K+ + N L+I+DD+ + G +K GG G NG+K I
Sbjct: 57 PTTYMNLSGDFVKNISTYFKV-SPNNILIIYDDMSYEVGQAAIKPKGGSNGQNGIKDILL 115
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K RL+IGIG+ +HVL +F+ E + +I+ A + +
Sbjct: 116 KMNTEEIPRLKIGIGK---NQEAAKHVLSDFTLEEFKIIDLVINQAAEAAISFLFNDIRI 172
Query: 180 FLNHIV 185
+N
Sbjct: 173 VMNSYN 178
>gi|47459376|ref|YP_016238.1| peptidyl-tRNA hydrolase [Mycoplasma mobile 163K]
gi|47458706|gb|AAT28027.1| peptidyl-tRNA hydrolase [Mycoplasma mobile 163K]
Length = 190
Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats.
Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 9/186 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNP +Y +NRHN+G+M +D+I K+KF + I+ K
Sbjct: 12 MKLIIGLGNPDPKYQKNRHNVGYMVVDKILENLRLKINKEKFSGIFVKT----EEFIIAK 67
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSG + + ++K+ + N L+I+DD+ + G +K GG G NG+K I
Sbjct: 68 PTTYMNLSGDFVKNISTYFKV-SPNNILIIYDDMSYEVGQAAIKPKGGSNGQNGIKDILL 126
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K RL+IGIG+ +HVL +F+ E + +I+ A + +
Sbjct: 127 KMNTEEIPRLKIGIGK---NQEAAKHVLSDFTLEEFKIIDLVINQAAEAAISFLFNDIRI 183
Query: 180 FLNHIV 185
+N
Sbjct: 184 VMNSYN 189
>gi|255083292|ref|XP_002504632.1| peptidyl-tRNA hydrolase, potentially chloroplast precursor
[Micromonas sp. RCC299]
gi|226519900|gb|ACO65890.1| peptidyl-tRNA hydrolase, potentially chloroplast precursor
[Micromonas sp. RCC299]
Length = 287
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 6/193 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
+++ GLGNPG + RHN GF +D + + A++ G++ G+ +L K
Sbjct: 37 WLLVGLGNPGSRFEGTRHNAGFDVLDILARTEGISWTDAARHRAKVGVGKIAGVPVLLAK 96
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+S+ + +YK+PN N LV++DDLD G ++LK GG GHNG+++I +
Sbjct: 97 PQTYMNLSGESVRSLCRWYKIPN-SNLLVVYDDLDTAVGAIKLKGKGGHGGHNGIRNIID 155
Query: 121 K-CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLP--IIDNIARSLPLLAKRE 176
+ CG + R++ GIGRP + HVL F E L ++ +
Sbjct: 156 EVCGDKVFARVKFGIGRPKPGVEVYDHVLTKFGDDEATELESKGTWAKACDAVRGVLVDG 215
Query: 177 DVSFLNHIVSVRK 189
++ + + K
Sbjct: 216 LDKTMSAVNTEHK 228
>gi|148245096|ref|YP_001219790.1| peptidyl-tRNA hydrolase [Candidatus Vesicomyosocius okutanii HA]
gi|166229464|sp|A5CVE8|PTH_VESOH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|146326923|dbj|BAF62066.1| peptidyl-tRNA hydrolase, PTH1 family [Candidatus Vesicomyosocius
okutanii HA]
Length = 193
Score = 187 bits (477), Expect = 4e-46, Method: Composition-based stats.
Identities = 62/182 (34%), Positives = 101/182 (55%), Gaps = 3/182 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GLGNPG Y +RHN+GF D + + K+ KF E+++ + + L+K
Sbjct: 4 KLIVGLGNPGKNYKYHRHNVGFWFCDALAKLYAGNFKKRTKFFGEVTQINIFNHKIQLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SGQS+ + NFY++ N + L++HD+L+++ G ++K+GG GHNGLK+ +
Sbjct: 64 PTTFMNCSGQSIQSIANFYQI-NADEILIVHDELNINPGIAKIKSGGSHGGHNGLKNTIK 122
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K + RLRIGIG P + I+ VL S E + ++N + + + K
Sbjct: 123 ILETKAFYRLRIGIGHPGNKLPIVDFVLNTPSKDELDKIQNALNNSLQVIEDVIKNNLDK 182
Query: 180 FL 181
+
Sbjct: 183 VI 184
>gi|320536628|ref|ZP_08036647.1| peptidyl-tRNA hydrolase [Treponema phagedenis F0421]
gi|320146532|gb|EFW38129.1| peptidyl-tRNA hydrolase [Treponema phagedenis F0421]
Length = 203
Score = 187 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 65/172 (37%), Positives = 92/172 (53%), Gaps = 13/172 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL---DGLRTIL 58
++A LGN G EY RHN ++ ++I W+ KF ++ G L
Sbjct: 3 KLIAFLGNHGREYARTRHNAAWIISEKIAVSKNVS-WQHKFSGNYAQAPFSCTGGEVVHL 61
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP+T+MNLSG S+ +++FYKL E LV+HD+L+L + K GG GHNGL+SI
Sbjct: 62 LKPETYMNLSGVSVKALVSFYKLKP-EEILVVHDELELAPAAISFKWAGGLGGHNGLRSI 120
Query: 119 SEKCGK-NYKRLRIGIGRPPDTA-------HIIRHVLGNFSSPERYFLLPII 162
+ G ++ RLRIGIGRP +A I +VL FS E + II
Sbjct: 121 KAQLGTADFWRLRIGIGRPDFSAQGGNAHPDIAGYVLSLFSQHELEDIEKII 172
>gi|34558362|ref|NP_908177.1| peptidyl-tRNA hydrolase [Wolinella succinogenes DSM 1740]
gi|46576697|sp|Q7M7U8|PTH_WOLSU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|34484081|emb|CAE11077.1| PEPTIDYL-TRNA HYDROLASE [Wolinella succinogenes]
Length = 192
Score = 187 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 76/180 (42%), Positives = 99/180 (55%), Gaps = 9/180 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M +V GLGNPG Y RHNIGF ID + A K F E+ + + +
Sbjct: 1 MVLVVGLGNPGKTYESTRHNIGFRVIDALLERRSALNATKSTFKGELHK----EGENLFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MNLSG+S L V FYK E LVIHDDLDL FG +RLK GGG+ GHNGLKS+
Sbjct: 57 KPTTYMNLSGESALPVSTFYK---PEKILVIHDDLDLPFGAIRLKRGGGNGGHNGLKSLD 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFS-SPERYFLLPIIDNIARSLPLLAKREDV 178
+ G +Y RLRIGIG+PP + +VL FS E+ + + ++ + +
Sbjct: 114 KLLGNDYYRLRIGIGKPPLGWEVADYVLARFSQEEEQELEERLFPHAKEAIESFLEGKME 173
>gi|269957487|ref|YP_003327276.1| peptidyl-tRNA hydrolase [Xylanimonas cellulosilytica DSM 15894]
gi|269306168|gb|ACZ31718.1| peptidyl-tRNA hydrolase [Xylanimonas cellulosilytica DSM 15894]
Length = 202
Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats.
Identities = 64/194 (32%), Positives = 109/194 (56%), Gaps = 10/194 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLD-------G 53
++V GLGNPG +Y NRHN+G M +D + + + A + EG+L G
Sbjct: 6 WLVVGLGNPGAQYAGNRHNVGQMVLDLLAERAGARFSRHPRAQAVVGEGRLGVLPGGRPG 65
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
R ++ KP T+MN+SG + + +Y + +V ++D+ F T++LKTGGG+ GHN
Sbjct: 66 PRVVVAKPTTYMNVSGGPVANLAKYYGIDADHVVVVHD-EVDIPFDTIKLKTGGGEGGHN 124
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
GL+ IS+ G ++Y R+R+G+GRPP +VL +F+ PER L ++D+ A ++ ++
Sbjct: 125 GLRDISKALGTRDYVRVRVGVGRPPGRMDTADYVLRDFAGPERKDLPILLDDAADAVEMV 184
Query: 173 AKREDVSFLNHIVS 186
++ +
Sbjct: 185 LTEGLLAAQGRFHA 198
>gi|42526159|ref|NP_971257.1| peptidyl-tRNA hydrolase [Treponema denticola ATCC 35405]
gi|68052976|sp|Q73Q01|PTH_TREDE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|41816271|gb|AAS11138.1| peptidyl-tRNA hydrolase [Treponema denticola ATCC 35405]
Length = 203
Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 13/185 (7%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE---GQLDGLRTILI 59
++ LGN G +Y RHN ++ D I W+ KF + ++ G L+
Sbjct: 4 LIVFLGNYGKKYENTRHNAAWVLCDSI-EIGSNAVWQSKFKGQYAKLPSSMTPGRAVHLL 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+T+MNLSG+S++ +F++L EN L++HD+L+L G L K GG GHNGL+SI
Sbjct: 63 KPETYMNLSGESVIAAASFFRLKP-ENILIVHDELELKPGILSFKWSGGLGGHNGLRSIK 121
Query: 120 EKCGK-NYKRLRIGIGRPPDTA-------HIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
++ RLRIGIGRP ++ I +VL F+ E L +
Sbjct: 122 SVLNTADFFRLRIGIGRPDFSSQGGDASPDISGYVLSRFAQSELDVLKSQVPQADSFFKE 181
Query: 172 LAKRE 176
L + +
Sbjct: 182 LLEAD 186
>gi|303233164|ref|ZP_07319837.1| aminoacyl-tRNA hydrolase [Atopobium vaginae PB189-T1-4]
gi|302480749|gb|EFL43836.1| aminoacyl-tRNA hydrolase [Atopobium vaginae PB189-T1-4]
Length = 220
Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats.
Identities = 57/181 (31%), Positives = 91/181 (50%), Gaps = 2/181 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGN Y RHNIGF ID ++ AWK + ++ +L KPQ
Sbjct: 39 LIVGLGNADARYANTRHNIGFAVIDALYERLQLGAWKTQAGCLVASYAGPHGTVVLAKPQ 98
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN G ++ ++ + N + L++HD+LD G +RLK GG HNGL+S+S+K
Sbjct: 99 TYMNTCGGAIAKLAAKLGI-NARSILIVHDELDKASGVVRLKWAGGLNAHNGLRSVSQKL 157
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G +++ RL+ GI RP + + +VL + S + ++ A L + L
Sbjct: 158 GTRDFCRLQCGIDRPQGSMAVADYVLQHLSHRQLEAFTNTANSAADLLESCIAQGFQKTL 217
Query: 182 N 182
N
Sbjct: 218 N 218
>gi|258591288|emb|CBE67585.1| peptidyl-tRNA hydrolase [NC10 bacterium 'Dutch sediment']
Length = 191
Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats.
Identities = 62/181 (34%), Positives = 95/181 (52%), Gaps = 2/181 (1%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFM 65
GLGNPG EY +RHN+GF +D + + ++ + G + G + +LIKP TFM
Sbjct: 2 GLGNPGPEYEVSRHNVGFRVVDTLADRAGVTLTRCRYRSLFVRGSIHGAQVLLIKPLTFM 61
Query: 66 NLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-K 124
N SG S+ +L + +V+HDDLDL LR++ GGG GH G++S+ E G
Sbjct: 62 NESGFSVSRWQQALRL-DPGRIIVVHDDLDLPPSQLRIRVGGGHGGHRGIRSVIEAIGSS 120
Query: 125 NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHI 184
++ R+++GIGRP D + HVLG F + L I A ++ + + +N
Sbjct: 121 DFLRVKVGIGRPQDGQDAVTHVLGPFEECDGGVLEAAIQRAADAVEAVMQEGFEVAMNRY 180
Query: 185 V 185
Sbjct: 181 N 181
>gi|325473599|gb|EGC76790.1| peptidyl-tRNA hydrolase [Treponema denticola F0402]
Length = 203
Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 13/185 (7%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE---GQLDGLRTILI 59
++ LGN G +Y RHN ++ D I W+ KF + ++ G L+
Sbjct: 4 LIVFLGNYGKKYENTRHNAAWILCDSI-EIGSNAVWQGKFKGQYAKLPSSMTPGRAVHLL 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+T+MNLSG+S++ +F++L EN L++HD+L+L G L K GG GHNGL+SI
Sbjct: 63 KPETYMNLSGESVIAAASFFRLKP-ENILIVHDELELKPGILSFKWSGGLGGHNGLRSIK 121
Query: 120 EKCGK-NYKRLRIGIGRPPDTA-------HIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
++ RLRIGIGRP ++ I +VL F+ E L +
Sbjct: 122 SVLNTADFFRLRIGIGRPDFSSQGGDASPDISGYVLSRFAQSELDVLKSQVPQADSFFKE 181
Query: 172 LAKRE 176
L + +
Sbjct: 182 LLEAD 186
>gi|311246504|ref|XP_003122235.1| PREDICTED: probable peptidyl-tRNA hydrolase-like [Sus scrofa]
Length = 341
Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 7/170 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKK--KFHAEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W + + A+++ L + +L
Sbjct: 158 WLVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWARDARCAADLALASLGDAQVVL 215
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN +G+S+ + L E ++HD+LD G L LK GG GHNG++S
Sbjct: 216 LRPRRLMNNNGRSVARAAELFGL-TAEEVYLVHDELDKPLGKLALKLGGSARGHNGVRSC 274
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
N RLR+GIGRP + +VLG FS E+ L P+++
Sbjct: 275 ISCLNSNAMPRLRVGIGRPTHPDTVQAYVLGRFSLAEQELLPPLLERATD 324
>gi|194225854|ref|XP_001500180.2| PREDICTED: similar to peptidyl-tRNA hydrolase 1 homolog [Equus
caballus]
Length = 214
Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 57/170 (33%), Positives = 89/170 (52%), Gaps = 7/170 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP---AWKKKFHAEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ A ++ A+++ L + +L
Sbjct: 31 WLVAGLGNPG--MPRTRHSVGMAVLGQLARRLGVAESWARDRRCAADLALASLGDAQLVL 88
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN +G+S+ + L E ++HD+LD G L LK GG GHNG++S
Sbjct: 89 LRPRRLMNANGRSVARAAELFGL-TAEEVYLVHDELDKPLGKLALKLGGSARGHNGVRSC 147
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
N RLR+GIGRPP + HVLG FS E+ L P+++ A
Sbjct: 148 ISCLNSNAMPRLRVGIGRPPHPDAVQAHVLGCFSPAEQELLPPLLERAAD 197
>gi|88607642|ref|YP_505815.1| peptidyl-tRNA hydrolase [Anaplasma phagocytophilum HZ]
gi|119390910|sp|Q2GII6|PTH_ANAPZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|88598705|gb|ABD44175.1| peptidyl-tRNA hydrolase [Anaplasma phagocytophilum HZ]
Length = 183
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 72/187 (38%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y E RHN+GFM ID + FFP + K A +S G + R +L+K
Sbjct: 1 MLLLVGLGNPGKRYAETRHNVGFMIIDAVARGFFFPEFCSKHDALVSIGNIGTHRVMLMK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P +MN SG S+L + +K+ E+ V HDD++L GT+R+K GGG GHNGL+SI
Sbjct: 61 PLLYMNRSGTSVLSCTSMHKIAP-EHITVFHDDVELQPGTIRVKLGGGSGGHNGLRSIDS 119
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
GK Y R+R G+GR + ++ +VL +F + +++++A +L +L F
Sbjct: 120 AIGKAYWRVRFGVGR-AELCNLSDYVLSDF--ENIAQVTDLVNSVAANLQMLLDGNAAGF 176
Query: 181 LNHIVSV 187
++ + SV
Sbjct: 177 VSKVTSV 183
>gi|15605534|ref|NP_220320.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis D/UW-3/CX]
gi|76789543|ref|YP_328629.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis A/HAR-13]
gi|166154142|ref|YP_001654260.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis 434/Bu]
gi|237803231|ref|YP_002888425.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis B/Jali20/OT]
gi|237805152|ref|YP_002889306.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis B/TZ1A828/OT]
gi|255507418|ref|ZP_05383057.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis D(s)2923]
gi|301335382|ref|ZP_07223626.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis L2tet1]
gi|6831525|sp|O84806|PTH_CHLTR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390924|sp|Q3KKP1|PTH_CHLTA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238687429|sp|B0B927|PTH_CHLT2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|3329266|gb|AAC68395.1| Peptidyl tRNA Hydrolase [Chlamydia trachomatis D/UW-3/CX]
gi|76168073|gb|AAX51081.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis A/HAR-13]
gi|165930130|emb|CAP03614.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis 434/Bu]
gi|231273452|emb|CAX10367.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274465|emb|CAX11260.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis B/Jali20/OT]
gi|296436351|gb|ADH18525.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis G/9768]
gi|296437282|gb|ADH19452.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis G/11222]
gi|296438210|gb|ADH20371.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis G/11074]
gi|297140711|gb|ADH97469.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis G/9301]
gi|297748928|gb|ADI51474.1| Peptidyl-tRNA hydrolase [Chlamydia trachomatis D-EC]
gi|297749808|gb|ADI52486.1| Peptidyl-tRNA hydrolase [Chlamydia trachomatis D-LC]
Length = 179
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 102/176 (57%), Gaps = 6/176 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
+V G+GNPG +Y RHNIGF+ +D + S + +A ++ ++ +L+K
Sbjct: 3 KLVVGIGNPGRQYVWTRHNIGFLLLDSLASRFLGAFREAPRLYASFAKVEISSEAVVLMK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T++NL+G+++L F+ + ++E+ LV+ DD++ +FG +R + G GHNG+K+ ++
Sbjct: 63 PTTYVNLTGKAVLAAKKFFDV-SMEDILVVADDINREFGFVRFRQDCGSGGHNGIKNTTQ 121
Query: 121 KCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIIDN-IARSLPLL 172
N Y +LR+G+GRP P + +VL +FS E+ L ++ I LP L
Sbjct: 122 ILQSNHYWQLRLGVGRPSYPGAEGVADYVLSSFSLNEKEKLNDFLEKGIEEILPWL 177
>gi|255349200|ref|ZP_05381207.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis 70]
gi|255503737|ref|ZP_05382127.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis 70s]
Length = 179
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 102/176 (57%), Gaps = 6/176 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
+V G+GNPG +Y RHN+GF+ +D + S + +A ++ ++ +L+K
Sbjct: 3 KLVVGIGNPGRQYVWTRHNVGFLLLDSLASRFLGAFREAPRLYASFAKVEISSEAVVLMK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T++NL+G+++L F+ + ++E+ LV+ DD++ +FG +R + G GHNG+K+ ++
Sbjct: 63 PTTYVNLTGKAVLAAKKFFDV-SMEDILVVADDINREFGFVRFRQDCGSGGHNGIKNTTQ 121
Query: 121 KCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIIDN-IARSLPLL 172
N Y +LR+G+GRP P + +VL +FS E+ L ++ I LP L
Sbjct: 122 ILQSNHYWQLRLGVGRPSYPGAEGVADYVLSSFSLNEKEKLNDFLEKGIEEILPWL 177
>gi|123965518|ref|YP_001010599.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9515]
gi|166229435|sp|A2BUN1|PTH_PROM5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|123199884|gb|ABM71492.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus str. MIT 9515]
Length = 199
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 8/194 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG +Y ++RHNIGF+ ++ + K K + +E +++ L P
Sbjct: 7 FIIGLGNPGKQYIKSRHNIGFLLLETFSKKYDAQFTLKNKLKSRYTEFKINDSIYKLFMP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG ++ ++++YK+ +L+ +I DD+DL G +R + G GHNGLK I K
Sbjct: 67 HTYMNNSGDAVKAIVDWYKI-SLDKVFIIVDDIDLPLGKIRFRKKGSSGGHNGLKDIINK 125
Query: 122 C-GKNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+N+ R++IGIG PP + I HVLGN SS E L + + SL L +
Sbjct: 126 LQTENFNRIKIGIGSPPINETKKQLNTISHVLGNISSQENSTLEKVYQKVIESLEELDIK 185
Query: 176 EDVSFLNHIVSVRK 189
+ ++ + S K
Sbjct: 186 NEDYIISELNSFHK 199
>gi|167957386|ref|ZP_02544460.1| peptidyl-tRNA hydrolase [candidate division TM7 single-cell isolate
TM7c]
Length = 187
Score = 185 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 69/181 (38%), Positives = 103/181 (56%), Gaps = 4/181 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M I+ GNPG++Y + RHNIG+M ID++ K KF A I+E L+G + +L+
Sbjct: 1 MKIIFAQGNPGNQYEKTRHNIGWMIIDKLAKQLNAAFIHKPKFSASIAESSLNGEKILLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TF N +G S +++FYK+ N ++ LV+HDDL +DFG LR++ G DAG+NG+KS++
Sbjct: 61 KPLTFYNDTGVSARALIDFYKI-NTKDILVLHDDLMIDFGKLRIRLSGRDAGNNGVKSLN 119
Query: 120 EKCGKNYKRLRIGI-GRPPDTAHIIRHVLGNFSSPERYFLLP-IIDNIARSLPLLAKRED 177
GK++ RLRIGI + H VL F+ E + II + +
Sbjct: 120 AHLGKDFARLRIGIYTILRNKIHDKDFVLKKFTKDEIQLIEEKIIPQSIKIIHDFINDNL 179
Query: 178 V 178
Sbjct: 180 E 180
>gi|315606043|ref|ZP_07881074.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315312325|gb|EFU60411.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 203
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 98/193 (50%), Gaps = 9/193 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL-------DGL 54
++V GLGNPG +Y RHN+G++ +D + S + ++ +L G
Sbjct: 7 WLVVGLGNPGAQYASTRHNVGYLTLDVLASRGGASLTSHRSRTHTADVRLGVGPGGVPGP 66
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
R +L + ++MN SG + + +F K+ LVIHDD+DL TLRLK GGG+ GHNG
Sbjct: 67 RVVLARADSYMNTSGGPIAALASFLKILP-SRILVIHDDMDLPAHTLRLKVGGGEGGHNG 125
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
LKS+S G ++Y RLRIG+GRPP +VL + ER + + + +
Sbjct: 126 LKSLSSHLGTRDYARLRIGVGRPPGRMDPADYVLSALPAKERPDWDVTFEQASDVVEDIV 185
Query: 174 KREDVSFLNHIVS 186
R + +
Sbjct: 186 TRGFAPTQQDLHT 198
>gi|166155017|ref|YP_001653272.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|238687448|sp|B0BAQ6|PTH_CHLTB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|165931005|emb|CAP06568.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis L2b/UCH-1/proctitis]
Length = 179
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 54/172 (31%), Positives = 99/172 (57%), Gaps = 5/172 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
+V G+GNPG +Y RHNIGF+ +D + S + +A ++ ++ +L+K
Sbjct: 3 KLVVGIGNPGRQYVWTRHNIGFLLLDSLASRFLGAFREAPRLYASFAKVEISSEAVVLMK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T++NL+G+++L F+ + ++E+ LV+ DD++ +FG +R + G GHNG+K+ ++
Sbjct: 63 PTTYVNLTGKAVLAAKKFFDV-SMEDILVVADDINREFGFVRFRQDCGSGGHNGIKNTTQ 121
Query: 121 KCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
N Y +LR+G+GRP P + +VL +FS E+ L ++ +
Sbjct: 122 ILQSNHYWQLRLGVGRPSYPGAEGVADYVLSSFSLNEKEKLNDFLEKGIEEI 173
>gi|296439144|gb|ADH21297.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis E/11023]
Length = 179
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 101/176 (57%), Gaps = 6/176 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
+V G+GNPG +Y RHNIGF+ +D + S + +A ++ ++ +L+K
Sbjct: 3 KLVVGIGNPGRQYVWTRHNIGFLLLDSLASRFLGAFREAPRLYASFAKVEISSEAVVLMK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T++NL+G+++L F+ + ++E+ LV+ DD++ +FG +R + G GHNG+K+ ++
Sbjct: 63 PTTYVNLTGKAVLAAKKFFDV-SMEDILVVADDINREFGFVRFRQDCGSGGHNGIKNTTQ 121
Query: 121 KCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIIDN-IARSLPLL 172
N Y +LR+G+GRP P + +VL +FS E+ L ++ LP L
Sbjct: 122 ILQSNHYWQLRLGVGRPSYPGAEGVADYVLSSFSLNEKEKLNDFLEKGTEEILPWL 177
>gi|255311636|ref|ZP_05354206.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis 6276]
gi|255317937|ref|ZP_05359183.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis 6276s]
Length = 179
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 59/176 (33%), Positives = 103/176 (58%), Gaps = 6/176 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHS-FHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+V G+GNPG +Y RHNIGF+ +D + S F + +A ++ ++ +L+K
Sbjct: 3 KLVVGIGNPGRQYVWTRHNIGFLLLDSLASHFLGAFREAPRLYASFAKVEISSEAVVLMK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T++NL+G+++L F+ + ++E+ LV+ DD++ +FG +R + G GHNG+K+ ++
Sbjct: 63 PTTYVNLTGKAVLAAKKFFDV-SMEDILVVADDINREFGFVRFRQDCGSGGHNGIKNTTQ 121
Query: 121 KCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIIDN-IARSLPLL 172
N Y +LR+G+GRP P + +VL +FS E+ L ++ I LP L
Sbjct: 122 ILQSNHYWQLRLGVGRPSYPGAEGVADYVLSSFSLNEKEKLNDFLEKGIEEILPWL 177
>gi|269468549|gb|EEZ80198.1| peptidyl-tRNA hydrolase [uncultured SUP05 cluster bacterium]
Length = 146
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 57/135 (42%), Positives = 85/135 (62%), Gaps = 3/135 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GLGNPG +Y +RHN+GF +D + S + + KF E+S+ + G L+K
Sbjct: 4 KLIVGLGNPGKDYQSHRHNVGFWFVDALASLYTGVFKKETKFFGEVSQINVAGSTVRLLK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SGQS+ + NFY++ N + LV+HD+LDL+ G ++K GG GHNGL+ +
Sbjct: 64 PNTYMNRSGQSIQSIANFYQI-NTDEILVVHDELDLNPGVAKIKFDGGHGGHNGLRDTID 122
Query: 121 KCG-KNYKRLRIGIG 134
G K + RLR+GIG
Sbjct: 123 TLGSKKFHRLRLGIG 137
>gi|33860808|ref|NP_892369.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|46576734|sp|Q7V342|PTH_PROMP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|33633750|emb|CAE18709.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 203
Score = 184 bits (469), Expect = 3e-45, Method: Composition-based stats.
Identities = 67/193 (34%), Positives = 103/193 (53%), Gaps = 8/193 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
+ GLGNPG EY +NRHNIGF+ ++ + K K + SE +++ L
Sbjct: 6 KFIIGLGNPGKEYIQNRHNIGFLLLENFSEKYDSKFTLKNKLKSWYSEFKINNFTYRLFM 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ ++++YK+ +L+ +I DD+DL G +R + G GHNG+K I
Sbjct: 66 PNTFMNNSGNAVRAIVDWYKI-DLDRLFIIVDDIDLPLGKIRFRKKGSSGGHNGIKDIIN 124
Query: 121 KC-GKNYKRLRIGIGRPPDTA-----HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
K +N+ R++IGIG PP + I HVLGN SS E L + + SL L
Sbjct: 125 KLQTENFNRIKIGIGSPPVNERKKTLNTISHVLGNISSKESLTLDRVYKKLIESLIELND 184
Query: 175 REDVSFLNHIVSV 187
+ + ++ + S
Sbjct: 185 KNEDYIISELNSF 197
>gi|218509727|ref|ZP_03507605.1| peptidyl-tRNA hydrolase [Rhizobium etli Brasil 5]
Length = 131
Score = 184 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 77/132 (58%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH H F W KKF AEI+EG+L G + +LIK
Sbjct: 1 MLIIAGLGNPGGKYAGNRHNIGFMAVDAIHRRHSFSPWSKKFKAEIAEGELGGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+++ E M FYKL + + I+D+LDL G RLKTGGG GHNG++S+
Sbjct: 61 PQTYMNLSGEAVGEAMRFYKL-QPADLVAIYDELDLSPGKARLKTGGGHGGHNGIRSLDA 119
Query: 121 KCGKNYKRLRIG 132
CGK Y+RLR+G
Sbjct: 120 HCGKEYRRLRLG 131
>gi|289525845|emb|CBJ15326.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis Sweden2]
gi|296435427|gb|ADH17605.1| peptidyl-tRNA hydrolase [Chlamydia trachomatis E/150]
Length = 179
Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 102/176 (57%), Gaps = 6/176 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
+V G+GNPG +Y RHNIGF+ +D + S + +A ++ ++ +L+K
Sbjct: 3 KLVVGIGNPGRQYVWTRHNIGFLLLDSLASRFLGAFREAPRLYASFAKVEISSEAVVLMK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T++NL+G+++L F+ + ++E+ LV+ DD++ +FG +R + G GHNG+K+ ++
Sbjct: 63 PTTYVNLTGKAVLASKKFFDV-SMEDILVVADDINREFGFVRFRQDCGSGGHNGIKNTTQ 121
Query: 121 KCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIIDN-IARSLPLL 172
N Y +LR+G+GRP P + +VL +FS E+ L ++ I LP L
Sbjct: 122 ILQSNHYWQLRLGVGRPSYPGAEGVADYVLSSFSLNEKEKLNDFLEKGIEEILPWL 177
>gi|160871789|ref|ZP_02061921.1| peptidyl-tRNA hydrolase [Rickettsiella grylli]
gi|159120588|gb|EDP45926.1| peptidyl-tRNA hydrolase [Rickettsiella grylli]
Length = 198
Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
++AGL NPG +Y ++RHN G I+ + K+ KFHA IS L ++ ++
Sbjct: 8 LIAGLANPGKDYAKSRHNAGAWLIETLLQQRDLTPLKRENKFHALISAWSLSAVKCWILI 67
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG+++ + +FY +P + L++HDDLDL G R K GGGD GHNGLK I
Sbjct: 68 PTTFMNESGRAIKAIAHFYHIP-VSAILIVHDDLDLLPGIARYKHGGGDGGHNGLKDIMR 126
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K++ RLR+GIG P + +VL + S ++ + I++ +L L A+ +
Sbjct: 127 HLQSKDFWRLRLGIGHPGHRDKVHHYVLSSPSIADKQRINQAIEDANSTLRLFAEGQPER 186
Query: 180 FLNHIVS 186
++ + +
Sbjct: 187 AMHVLHT 193
>gi|227548216|ref|ZP_03978265.1| peptidyl-tRNA hydrolase [Corynebacterium lipophiloflavum DSM 44291]
gi|227079690|gb|EEI17653.1| peptidyl-tRNA hydrolase [Corynebacterium lipophiloflavum DSM 44291]
Length = 171
Score = 183 bits (466), Expect = 8e-45, Method: Composition-based stats.
Identities = 64/170 (37%), Positives = 91/170 (53%), Gaps = 6/170 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN G + ++ + + KK + E++E L G R L +
Sbjct: 4 LIVGLGNPGARYAATRHNAGVIVLEELLDRENARLSVHKKTNTEVAE--LSGGRV-LART 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
+ +MN+SG + + +YK E VI+D+LDL FG + L+ GGGD GHNGLKS+S
Sbjct: 61 RGYMNVSGGPVKALAGYYKASPAE-IYVIYDELDLGFGEVSLRVGGGDHGHNGLKSVSAS 119
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G + Y +L +GIGRPP +VL F + E L I A L
Sbjct: 120 LGTREYNKLAVGIGRPPGRMAPADYVLRPFPNKEAEELPIIAAEAADLLE 169
>gi|126665170|ref|ZP_01736153.1| peptidyl-tRNA hydrolase [Marinobacter sp. ELB17]
gi|126630540|gb|EBA01155.1| peptidyl-tRNA hydrolase [Marinobacter sp. ELB17]
Length = 196
Score = 183 bits (466), Expect = 8e-45, Method: Composition-based stats.
Identities = 65/170 (38%), Positives = 92/170 (54%), Gaps = 3/170 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHN G + ++ + +KK+H + Q GL L+ P
Sbjct: 7 MVVGLGNPGADYENTRHNAGALFVEALARDAGQSLRLEKKYHGLYARIQWQGLELHLLNP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG + + +F+K+ + E L+ HD+LDL GT +LK GGG GHNGL+
Sbjct: 67 LTFMNRSGLPVKALADFFKI-SPEQILIAHDELDLPPGTAKLKKGGGHGGHNGLRDSIAH 125
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
G N++RLR+GIG P + + +VLG E L + D R LP
Sbjct: 126 LGTNNFQRLRLGIGHPGEARQVTGYVLGRLGKQEAEALTAVFDETMRVLP 175
>gi|124514472|gb|EAY55985.1| Peptidyl-tRNA hydrolase [Leptospirillum rubarum]
Length = 187
Score = 183 bits (466), Expect = 9e-45, Method: Composition-based stats.
Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 2/159 (1%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
+ GLGNPG EY RHN G + +D + P +K A+ EG+ G + IL+ P T
Sbjct: 6 IVGLGNPGREYERTRHNAGKIFLDSLSERVGIPLNHQKPIAQWGEGEWKGEKLILVFPLT 65
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
+MNLSG+ ++ + + E+ LVI DD+D+ G LR + G G GL SI + G
Sbjct: 66 YMNLSGK-VIPWLRMKGVHLPEDLLVILDDMDIPLGALRFREKGRSGGQKGLSSIIDALG 124
Query: 124 KN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPI 161
+ R++IGIGRP + +VLG+ E L
Sbjct: 125 GDRISRIKIGIGRPIEGQDPSDYVLGSLHPEESRLLEKA 163
>gi|217031843|ref|ZP_03437346.1| hypothetical protein HPB128_199g51 [Helicobacter pylori B128]
gi|298735533|ref|YP_003728054.1| PTH1 family peptidyl-tRNA hydrolase [Helicobacter pylori B8]
gi|216946495|gb|EEC25097.1| hypothetical protein HPB128_199g51 [Helicobacter pylori B128]
gi|298354718|emb|CBI65590.1| peptidyl-tRNA hydrolase, PTH1 family [Helicobacter pylori B8]
Length = 186
Score = 183 bits (466), Expect = 9e-45, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLISELNLSFTFSPKHNAYLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK E L++HDDLDL G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TEELLIVHDDLDLPLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GIGVIDHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|34540028|ref|NP_904507.1| peptidyl-tRNA hydrolase [Porphyromonas gingivalis W83]
gi|46576708|sp|Q7MXK9|PTH_PORGI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|34396339|gb|AAQ65406.1| peptidyl-tRNA hydrolase [Porphyromonas gingivalis W83]
Length = 185
Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 93/185 (50%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHN+GF ++ + + ++ I+ ++ IL+KP
Sbjct: 3 YLIVGLGNIGGEYNGTRHNVGFRMVNALAEDGGVQFVEARY-GAIARMRVKNAELILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M +P E LV+ DDL L FGTLRLK G DAGHNGLK+I+E
Sbjct: 62 NTYMNLSGNAVRYWMQQENIPR-EQVLVLVDDLALPFGTLRLKPKGSDAGHNGLKNIAEV 120
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLR G+G + VLG F+ E L + + +
Sbjct: 121 MGSIDYARLRFGLGDEFSKGRQVDFVLGRFTPEEEEKLPELTKHAVEIIKSFCLAGIQRT 180
Query: 181 LNHIV 185
+N
Sbjct: 181 MNRYN 185
>gi|187608018|ref|NP_001119866.1| hypothetical protein LOC559192 [Danio rerio]
gi|122890585|emb|CAM14093.1| novel protein similar to human and mouse peptidyl-tRNA hydrolase 1
homolog (S. cerevisiae) (PTRH1; zgc:112961) [Danio
rerio]
Length = 266
Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 59/178 (33%), Positives = 90/178 (50%), Gaps = 7/178 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP---AWKKKFHAEISEGQLDGLRTIL 58
+V GLGNPG +RH++G + + P +K E+ QL ++ +L
Sbjct: 57 KMVVGLGNPG--MTGSRHSVGMAVLTTLAERLGAPDGWRSDRKVSGEVVVTQLQDVQLVL 114
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN++G S+ + + Y + E+ L+IHD+LD G +K GG GHNG++S
Sbjct: 115 LRPKLLMNVNGVSVAKAASRYLI-QPEHILLIHDELDKPLGKFGIKHGGSARGHNGVRSC 173
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+ + RLRIGIGRP D I R+VLG FS E+ L +I L
Sbjct: 174 VDCLQTDVMPRLRIGIGRPSDKTPIDRYVLGRFSKEEQNVLDSVIKQSLDVLLDYLTD 231
>gi|224418391|ref|ZP_03656397.1| peptidyl-tRNA hydrolase [Helicobacter canadensis MIT 98-5491]
gi|253827709|ref|ZP_04870594.1| peptidyl-tRNA hydrolase [Helicobacter canadensis MIT 98-5491]
gi|313141922|ref|ZP_07804115.1| peptidyl-tRNA hydrolase [Helicobacter canadensis MIT 98-5491]
gi|253511115|gb|EES89774.1| peptidyl-tRNA hydrolase [Helicobacter canadensis MIT 98-5491]
gi|313130953|gb|EFR48570.1| peptidyl-tRNA hydrolase [Helicobacter canadensis MIT 98-5491]
Length = 190
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 87/189 (46%), Positives = 114/189 (60%), Gaps = 9/189 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILI 59
MF++ GLGN G +Y NRHNIGF +D + +F K F+ E+ + + +L+
Sbjct: 1 MFLIVGLGNIGEKYKNNRHNIGFCIVDSLIAFLNATKQSSKDFYGELYKAS----QILLL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG+S+L V NFYK+ + LVIHDDLDL FGT+R K GGG GHNGLKSI
Sbjct: 57 KPSTFMNLSGKSVLSVKNFYKI---DKMLVIHDDLDLPFGTVRFKFGGGSGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR-SLPLLAKREDV 178
E CGK Y RLR GIG+PP +I VLG+FS E II + + +L ++
Sbjct: 114 ELCGKEYYRLRYGIGKPPLKNQVIDWVLGDFSKEESIENEEIIKHCIKPALEIVKLENPS 173
Query: 179 SFLNHIVSV 187
+ I S+
Sbjct: 174 ELASKISSL 182
>gi|210135664|ref|YP_002302103.1| peptidyl-tRNA hydrolase [Helicobacter pylori P12]
gi|226694255|sp|B6JNZ5|PTH_HELP2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|210133632|gb|ACJ08623.1| peptidyl-tRNA hydrolase [Helicobacter pylori P12]
Length = 186
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSSKHNAYLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDL G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---PKELLIVHDDLDLPLGVVRFKKGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GIDVIEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|126297639|ref|XP_001365569.1| PREDICTED: similar to peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae), [Monodelphis domestica]
Length = 218
Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 94/172 (54%), Gaps = 11/172 (6%)
Query: 2 FIVAGLGNPGHEYC--ENRHNIGFMCIDRIHS-FHFFPAWKKKF--HAEISEGQLDGLRT 56
++VAGLGN Y RH++G ++++ + WKK+ HA+++ L
Sbjct: 31 WLVAGLGN----YRLQGTRHSVGMAVLNQLAQHLNVADQWKKQHQCHADVAVACLGEAEL 86
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L+KP+ FMN++G S+ + Y+L E+ ++HD+LD G L +K GG +GHNG++
Sbjct: 87 VLLKPRRFMNVNGLSVAQAAKMYQLA-AEDIYLVHDELDKPLGKLAMKLGGSASGHNGVR 145
Query: 117 SISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
S N RLR+GIGRP + R+VL F++ E+ L +++
Sbjct: 146 SCISCLNSNVMPRLRVGIGRPTHPGAVERYVLDRFTAAEQEQLPQLLEQATE 197
>gi|319441659|ref|ZP_07990815.1| peptidyl-tRNA hydrolase [Corynebacterium variabile DSM 44702]
Length = 187
Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats.
Identities = 66/175 (37%), Positives = 101/175 (57%), Gaps = 5/175 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+V GLGNPG +Y RHNIG +D + + KK +A + E ++ + +L KP
Sbjct: 13 LLVVGLGNPGADYEGTRHNIGAAVLDEL---GDHFSVNKKVNAHVDEIRVGDRKVVLAKP 69
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
++FMNLSG + + ++K+ +VIHD+LDLD GT++LK GGG GHNGLK I++
Sbjct: 70 RSFMNLSGGPVKALAGYFKVKPA-QVVVIHDELDLDLGTVKLKKGGGLNGHNGLKDIAKS 128
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G +++ R+++GIGRPP VL FS E+ + + + A + LA
Sbjct: 129 LGTQDFLRIQMGIGRPPGRMAPASFVLKRFSKAEQAEVPVMFADAADLVTGLAAG 183
>gi|257784144|ref|YP_003179361.1| peptidyl-tRNA hydrolase [Atopobium parvulum DSM 20469]
gi|257472651|gb|ACV50770.1| peptidyl-tRNA hydrolase [Atopobium parvulum DSM 20469]
Length = 179
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD-----GLRTI 57
++ GLGNPG +Y RHNIGF ID + + + WK + ++S + + I
Sbjct: 2 LICGLGNPGEKYAHTRHNIGFAVIDVLAARYNVHYWKNEAGCQVSTINITNASGQSQKII 61
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KP FMN SG L ++ + + + LVIHD++DL+ +R +TGGG HNGL+S
Sbjct: 62 LAKPWDFMNTSGGPLCKLARAHNI-TADQILVIHDEIDLEDEHIRFRTGGGLNAHNGLRS 120
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
I++K G +++ RL+ GI RPP + +VL + A + L
Sbjct: 121 IADKLGTRDFMRLQCGISRPPGRMTVANYVLKELKGVSLTNFYIEAEAAADKVEELI 177
>gi|218781213|ref|YP_002432531.1| Aminoacyl-tRNA hydrolase [Desulfatibacillum alkenivorans AK-01]
gi|218762597|gb|ACL05063.1| Aminoacyl-tRNA hydrolase [Desulfatibacillum alkenivorans AK-01]
Length = 224
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 103/186 (55%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++VAGLGNPG +Y + RHNIGFM D + ++ + G + +IKP
Sbjct: 36 WLVAGLGNPGEKYSQTRHNIGFMAADLLGEKWRLG-FETHGASLFGAGLIGETPAGVIKP 94
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q++MNLSG + E+ + + + E LVIHDDLDL FG +++K GG GH G++S+ +
Sbjct: 95 QSYMNLSGPPIWEIAGKFGI-DRERVLVIHDDLDLPFGKIKIKKKGGHGGHKGIQSLIQS 153
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G ++ RLR+GIGRPP ++ HVLG F + E L ++ ++ + +
Sbjct: 154 FGDGDFPRLRVGIGRPPAGQSVVDHVLGRFDAEENLVLGKVLALSGDAVETVLREGISKG 213
Query: 181 LNHIVS 186
+N +
Sbjct: 214 MNSFNN 219
>gi|313611264|gb|EFR86034.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL F2-208]
Length = 117
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 54/118 (45%), Positives = 79/118 (66%), Gaps = 1/118 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++AGLGNPG +Y RHN+GFM +D + H P K KF+ SE + G + IL+K
Sbjct: 1 MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
P TFMN SG+ + +M++Y +P +E+ ++++DDLDL G +RL+ G GHNG+KSI
Sbjct: 61 PLTFMNASGECIRPLMDYYNIP-IEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSI 117
>gi|308062761|gb|ADO04649.1| peptidyl-tRNA hydrolase [Helicobacter pylori Cuz20]
Length = 186
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLISELDLSFTFSPKHNACLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK E L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TEELLIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + ++ HVL F E ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GMGVVEHVLSKFHKNEEPLKNAAFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|188528268|ref|YP_001910955.1| peptidyl-tRNA hydrolase [Helicobacter pylori Shi470]
gi|226694257|sp|B2UVP3|PTH_HELPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|188144508|gb|ACD48925.1| peptidyl-tRNA hydrolase [Helicobacter pylori Shi470]
Length = 186
Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats.
Identities = 72/190 (37%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLISELDLSFTFSSKHNACLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK E L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TEELLIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GMGVIEHVLSKFHKNEEPLKNAAFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|311740812|ref|ZP_07714639.1| aminoacyl-tRNA hydrolase [Corynebacterium pseudogenitalium ATCC
33035]
gi|311304332|gb|EFQ80408.1| aminoacyl-tRNA hydrolase [Corynebacterium pseudogenitalium ATCC
33035]
Length = 215
Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 5/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCI-DRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+++ GLGNPG +Y RHN+G+M I D + + + +++ +G + + ++
Sbjct: 31 WLIVGLGNPGAKYAATRHNVGYMAIDDLLATGGDVLEPVRGIDVQVAPLDWEGHKVLAVR 90
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG + + + ++ +V+HD+LDL +RLK GG + GHNGLKS++E
Sbjct: 91 SGTFMNLSGDPVAPLAQQLGIAP-DHVIVLHDELDLPANKIRLKQGGNENGHNGLKSLTE 149
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G ++Y R+RIGI RPP + I +VLG + I A++ L+
Sbjct: 150 RLGTRDYLRVRIGIARPPKGSSIPDYVLGPVDTG--ADFDDAIATAAKAARLIVTEGLGK 207
Query: 180 FLNHIVS 186
N I S
Sbjct: 208 AQNQIHS 214
>gi|300871525|ref|YP_003786398.1| peptidyl-tRNA hydrolase [Brachyspira pilosicoli 95/1000]
gi|300689226|gb|ADK31897.1| peptidyl-tRNA hydrolase [Brachyspira pilosicoli 95/1000]
Length = 194
Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 19/197 (9%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFM 65
GLGNPG+EY +RHN+G+M +D++ KK + + + +L+KPQTFM
Sbjct: 2 GLGNPGNEYQNHRHNVGYMILDKVAKKLNVELDIKKKKTVFGKAKYGKIEYLLLKPQTFM 61
Query: 66 NLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG------------HN 113
NLSG++ L + +F K+ +++ +VI+DD+++ G +L DA HN
Sbjct: 62 NLSGEAALYMASFMKIA-VDDIIVIYDDMNIPVGEFKLVIAKNDADDNDNEEKEGPIKHN 120
Query: 114 GLKSISEKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G+KSI E N+ R+ IGIG P + I VL F+ ER + I D++ ++ +
Sbjct: 121 GIKSIEESLKSNNFTRVGIGIGAPAEGQEIADFVLSPFTKDERKKIKDITDDVVDAICKV 180
Query: 173 AKREDVSFLNHIVSVRK 189
N+ S +K
Sbjct: 181 LFES-----NNKTSKKK 192
>gi|255325413|ref|ZP_05366517.1| aminoacyl-tRNA hydrolase [Corynebacterium tuberculostearicum SK141]
gi|255297499|gb|EET76812.1| aminoacyl-tRNA hydrolase [Corynebacterium tuberculostearicum SK141]
Length = 215
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 5/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCI-DRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+++ GLGNPG +Y RHN+G+M + D + + + +++ G + + ++
Sbjct: 31 WLIVGLGNPGAKYAATRHNVGYMAVDDLLAAGGDVLEPVRGMDVQVAPLSWAGQKVLAVR 90
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG + + + ++ +V+HD+LDL +R+K GG + GHNGLKS++E
Sbjct: 91 SGTFMNLSGDPVAPLAQELGIAP-DHVIVLHDELDLPANKIRIKQGGNENGHNGLKSLTE 149
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ G ++Y R+RIGI RPP + I +VLG + I A + L+
Sbjct: 150 RLGARDYLRVRIGIARPPKGSSIPDYVLGPVDAG--AGFDDAIATAAEAARLIVADGLGK 207
Query: 180 FLNHIVS 186
N I S
Sbjct: 208 AQNQIHS 214
>gi|317010129|gb|ADU80709.1| peptidyl-tRNA hydrolase [Helicobacter pylori India7]
Length = 186
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSSKHNAYLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK+ L++HDDLDL G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYKIK---ELLIVHDDLDLPLGVVRFKKGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E + ++ +L + D +
Sbjct: 114 VLCSNSYYRLRVGISK---GIGVIEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|317013267|gb|ADU83875.1| peptidyl-tRNA hydrolase [Helicobacter pylori Lithuania75]
Length = 186
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSPKHNACLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDL G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---PKELLIVHDDLDLPLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E + ++ +L + D +
Sbjct: 114 ALCSNSYYRLRVGISK---GIGVIEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|306835679|ref|ZP_07468685.1| aminoacyl-tRNA hydrolase [Corynebacterium accolens ATCC 49726]
gi|304568397|gb|EFM43956.1| aminoacyl-tRNA hydrolase [Corynebacterium accolens ATCC 49726]
Length = 215
Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 5/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCI-DRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+++ GLGNPG +Y RHN+G+M + D + + E++ + R + ++
Sbjct: 31 WLIIGLGNPGAKYAATRHNVGYMAVDDVLAQGGDVLEPVRGMDLEVAPLRWGDTRVLAVR 90
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG + + + ++ +VIHD+LDL +RLK GG + GHNGLKS++
Sbjct: 91 TTTFMNLSGDPIAPLARALGIA-ADHIIVIHDELDLPANKIRLKQGGNENGHNGLKSLTH 149
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++Y R+RIGI RPP + I +VL + I + A + L+A + V
Sbjct: 150 NLGTRDYVRVRIGIARPPKGSSIPDYVLAPVDAG--PGFDTAIASAAEAARLIATQGLVQ 207
Query: 180 FLNHIVS 186
N I S
Sbjct: 208 AQNRIHS 214
>gi|54020384|ref|YP_115690.1| peptidyl-tRNA hydrolase [Mycoplasma hyopneumoniae 232]
gi|71893556|ref|YP_279002.1| peptidyl-tRNA hydrolase [Mycoplasma hyopneumoniae J]
gi|68052908|sp|Q601M5|PTH_MYCH2 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119390963|sp|Q4AAD0|PTH_MYCHJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|53987557|gb|AAV27758.1| peptidyl-tRNA hydrolase [Mycoplasma hyopneumoniae 232]
gi|71851683|gb|AAZ44291.1| peptidyl-tRNA hydrolase [Mycoplasma hyopneumoniae J]
Length = 184
Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 9/189 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN+G+ +D + +K + + IL K
Sbjct: 1 MKLIVGLGNPGEKYAKTKHNVGYWVLDLLAEKLALSFDQKTENGIY----VKQPDFILAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + E++ FYK+ N ++ ++I+DD++ + G +KT G G G+ I E
Sbjct: 57 PTTFMNKSGDFVEELIKFYKI-NTQDLMIIYDDMNFEVGQAAIKTTGSAGGQRGMAHIIE 115
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
KC K KRL+IGI R + +VL F + + +I+ A L ++
Sbjct: 116 KCKTKEIKRLKIGISR---GENAKEYVLSPFLPKDNAKIKLVIEEAANILIFYLSNSFIT 172
Query: 180 FLNHIVSVR 188
+ + +
Sbjct: 173 TIEKFNANK 181
>gi|188994142|ref|YP_001928394.1| peptidyl-tRNA hydrolase [Porphyromonas gingivalis ATCC 33277]
gi|238691460|sp|B2RHF2|PTH_PORG3 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|188593822|dbj|BAG32797.1| putative peptidyl-tRNA hydrolase [Porphyromonas gingivalis ATCC
33277]
Length = 185
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 93/185 (50%), Gaps = 3/185 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGN G EY RHN+GF ++ + + ++ I+ ++ IL+KP
Sbjct: 3 YLIVGLGNIGGEYNGTRHNVGFRMVNALAEDGGVQFVEARY-GAIAHMRVKNAELILLKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ M +P E LV+ DDL L FGTLRLK G DAGHNGLK+I+E
Sbjct: 62 NTYMNLSGNAVRYWMQQENIPR-EQVLVLVDDLALPFGTLRLKPKGSDAGHNGLKNIAEV 120
Query: 122 CGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y RLR G+G + VLG F+ E L + + +
Sbjct: 121 MGSIDYARLRFGLGDEFSKGRQVDFVLGRFTPEEEEKLPELTKHAVEIIKSFCLAGIQRT 180
Query: 181 LNHIV 185
+N
Sbjct: 181 MNRYN 185
>gi|269302742|gb|ACZ32842.1| peptidyl-tRNA hydrolase [Chlamydophila pneumoniae LPCoLN]
Length = 180
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 64/169 (37%), Positives = 92/169 (54%), Gaps = 5/169 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILI 59
++ +GNPGH Y RHN GF+ DR+ P +K K HA ++ + + I
Sbjct: 3 KLIVAIGNPGHGYANTRHNAGFLLADRLVEELQGPPFKPLSKCHALMTLVESSSGPLVFI 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TF+NLSG++++ ++ + L + LV+ DD++ FG LRL GG GHNGLKSI+
Sbjct: 63 KPTTFVNLSGKAVVLAKKYFNVA-LSHILVLADDVNRSFGKLRLCFNGGSGGHNGLKSIT 121
Query: 120 EKCGKN-YKRLRIGIGRP-PDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
G N Y +LR G+GRP + + VLG FS E L I +
Sbjct: 122 ASLGSNEYWQLRFGVGRPLEEGVELSNFVLGKFSEEENLQLGSIFVEAS 170
>gi|317152593|ref|YP_004120641.1| peptidyl-tRNA hydrolase [Desulfovibrio aespoeensis Aspo-2]
gi|316942844|gb|ADU61895.1| peptidyl-tRNA hydrolase [Desulfovibrio aespoeensis Aspo-2]
Length = 210
Score = 180 bits (459), Expect = 5e-44, Method: Composition-based stats.
Identities = 69/192 (35%), Positives = 104/192 (54%), Gaps = 9/192 (4%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFH------FFPAWKKKFHAEISEGQLDGLRTI 57
+ GLGNPG +Y + RHNIGFM + + + ++ E+ + + G +
Sbjct: 7 IVGLGNPGPKYEKTRHNIGFMLVGSLLATGAGRKSMHLERLEESGDYELWQVKFGGAFRL 66
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L KPQT+MNLSG+++ + + + + +V+HD+LDL G ++LK GGG+ GHNGLKS
Sbjct: 67 LAKPQTYMNLSGKAVARICGRHGITP-DAVMVVHDELDLSVGRIKLKQGGGNNGHNGLKS 125
Query: 118 ISEKCGK-NYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
I E G ++ RLRIGIGRP A I VL FS + + I+ + + L L +R
Sbjct: 126 IEECLGTPDFHRLRIGIGRPATQYADISGWVLEPFSDADAAHIPAILAHAIKGLDLFYRR 185
Query: 176 EDVSFLNHIVSV 187
+ HI
Sbjct: 186 GPAFAVQHINGF 197
>gi|208435365|ref|YP_002267031.1| peptidyl-tRNA hydrolase [Helicobacter pylori G27]
gi|226694256|sp|B5Z9B6|PTH_HELPG RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|208433294|gb|ACI28165.1| peptidyl-tRNA hydrolase [Helicobacter pylori G27]
Length = 186
Score = 180 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELNLSFAFSPKHNAYLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDL G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TKELLIVHDDLDLPLGVVRFKKGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GIGVIEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|254780007|ref|YP_003058114.1| peptidyl-tRNA hydrolase [Helicobacter pylori B38]
gi|254001920|emb|CAX30173.1| Peptidyl-tRNA hydrolase (PTH) [Helicobacter pylori B38]
Length = 186
Score = 180 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSPKHNACLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDL G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---PKELLIVHDDLDLPLGVVRFKKGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GIGVIEHVLSKFHKNEEPLKNAAFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|72080543|ref|YP_287601.1| peptidyl-tRNA hydrolase [Mycoplasma hyopneumoniae 7448]
gi|119390962|sp|Q4A8G1|PTH_MYCH7 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|71913667|gb|AAZ53578.1| peptidyl-tRNA hydrolase [Mycoplasma hyopneumoniae 7448]
Length = 184
Score = 180 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 9/189 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y + +HN+G+ +D + +K + + IL K
Sbjct: 1 MKLIVGLGNPGEKYAKTKHNVGYWVLDLLAEKLALSFDQKTENGIY----VKQPDFILAK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG + E++ FYK+ N ++ ++I+DD++ + G +KT G G G+ I E
Sbjct: 57 PTTFMNKSGDFVEELIKFYKI-NTQDLMIIYDDMNFEVGQAAIKTTGSAGGQRGMAHIIE 115
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
KC K KRL+IGI R + +VL F + + +I+ A L ++
Sbjct: 116 KCKTKEIKRLKIGISR---GKNAKEYVLSPFLPKDNAKIKLVIEEAANILIFYLSNSFIT 172
Query: 180 FLNHIVSVR 188
+ + +
Sbjct: 173 TIEKFNANK 181
>gi|308183600|ref|YP_003927727.1| peptidyl-tRNA hydrolase [Helicobacter pylori PeCan4]
gi|308065785|gb|ADO07677.1| peptidyl-tRNA hydrolase [Helicobacter pylori PeCan4]
Length = 186
Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats.
Identities = 71/190 (37%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSPKHNACLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK E L++HDDLDL G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TEELLIVHDDLDLSLGVVRFKKGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E ++ +L + D +
Sbjct: 114 TLCSNSYYRLRVGISK---GIGVIEHVLSKFHKNEEPLKNAAFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|61651816|ref|NP_001013348.1| probable peptidyl-tRNA hydrolase [Danio rerio]
gi|60416153|gb|AAH90788.1| Peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) [Danio rerio]
gi|182890234|gb|AAI65428.1| Ptrh1 protein [Danio rerio]
Length = 230
Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats.
Identities = 59/178 (33%), Positives = 91/178 (51%), Gaps = 7/178 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP---AWKKKFHAEISEGQLDGLRTIL 58
+V GLGNPG +RH++G + + P +K E+ QL ++ +L
Sbjct: 21 KMVVGLGNPG--MTGSRHSVGMAVLTTLAEHLGAPDGWRSDRKVSGEVVVTQLQDVQLVL 78
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN++G S+ + + Y +P E+ L+IHD+LD G +K GG GHNG++S
Sbjct: 79 LRPKLLMNVNGVSVAKAASRYLIPP-EHILLIHDELDKPLGKFGIKHGGSARGHNGVRSC 137
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+ + RLRIGIGRP D I R+VLG FS E+ L ++ L
Sbjct: 138 VDCLQTDVMPRLRIGIGRPSDKTPIDRYVLGRFSKEEQNVLDSVMKQSLDVLLDYLTD 195
>gi|317014912|gb|ADU82348.1| peptidyl-tRNA hydrolase [Helicobacter pylori Gambia94/24]
Length = 186
Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSSKHNAYLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDL G ++ K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---PKELLIVHDDLDLPLGVVKFKKGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F + E + ++ +L + D +
Sbjct: 114 ALCSNSYYRLRVGISK---GFNITEHVLSKFHNNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|317179674|dbj|BAJ57462.1| peptidyl-tRNA hydrolase [Helicobacter pylori F30]
Length = 186
Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + I +
Sbjct: 1 MMLLVGLGNPTLRYAHTRHNAGFDILDSLISELDLSFTFSSKHNACLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TKEILIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + ++ HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GMGVVEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|325971762|ref|YP_004247953.1| peptidyl-tRNA hydrolase [Spirochaeta sp. Buddy]
gi|324027000|gb|ADY13759.1| Peptidyl-tRNA hydrolase [Spirochaeta sp. Buddy]
Length = 184
Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats.
Identities = 61/177 (34%), Positives = 96/177 (54%), Gaps = 10/177 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG +Y +RHN+GF +D +F K+ F + ++ G +L++
Sbjct: 1 MRLILGLGNPGAKYEHSRHNVGFDVVDTCAAFFQVTLKKRCFR-LYRQAKV-GDNVLLVQ 58
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMN SG ++ + + + +VI D LDL G +R++ GG AGHNGLKS+ E
Sbjct: 59 PLTFMNASG----AILKHFPQTSASDMIVICDQLDLPPGMIRIRNGGSSAGHNGLKSLIE 114
Query: 121 KCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
G ++ R+ IGIGRP + ++ HVLG PE + + +L L + +
Sbjct: 115 CYGNGDFIRIYIGIGRPKEGVSVVDHVLG---QPEDESIAQGVHLACEALIDLIEGK 168
>gi|317182702|dbj|BAJ60486.1| peptidyl-tRNA hydrolase [Helicobacter pylori F57]
Length = 186
Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLISELDLSFTFSSKHNACLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TKELLIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + ++ HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GMGVVEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|308185267|ref|YP_003929400.1| peptidyl-tRNA hydrolase [Helicobacter pylori SJM180]
gi|308061187|gb|ADO03083.1| peptidyl-tRNA hydrolase [Helicobacter pylori SJM180]
Length = 186
Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFAFSPKHNAYLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK E L++HDDLDL G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSTKNFYK---TEELLIVHDDLDLPLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E ++ +L + + +
Sbjct: 114 LLCSNSYYRLRVGISK---GVGVIDHVLSKFHKNEEPLKNAAFEHAKNALKFFIESHNFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|261838771|gb|ACX98537.1| peptidyl-tRNA hydrolase [Helicobacter pylori 51]
Length = 186
Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSSKHNACLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TKELLIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GMGVIEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|225621395|ref|YP_002722654.1| peptidyl-tRNA hydrolase [Brachyspira hyodysenteriae WA1]
gi|225216216|gb|ACN84950.1| peptidyl-tRNA hydrolase [Brachyspira hyodysenteriae WA1]
Length = 198
Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 14/193 (7%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y +RHN+G+M +DR+ KK +G+ + +L+K
Sbjct: 2 MKLVMGLGNPGEQYKNHRHNVGYMILDRVAKKLNVELDIKKKKTVFGKGKSGKMEYLLLK 61
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG--------- 111
PQTFMNLSG++ L + +F K+ +EN +VI+DD+D+ G R+ D
Sbjct: 62 PQTFMNLSGEAALYMASFMKI-TVENIIVIYDDMDIPIGEFRVIPSKNDDSDSESEVNDI 120
Query: 112 ---HNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
HNG+KSI + N+ ++ +GIG P+ +L F+ ER + I DN+
Sbjct: 121 EIDHNGIKSIRDSLKSYNFTKIGVGIGACPEDEEKADFLLAPFTKDERKKIRDISDNVVD 180
Query: 168 SLPLLAKREDVSF 180
+ + +
Sbjct: 181 AACIALFESPQAA 193
>gi|300932600|ref|ZP_07147856.1| Peptidyl-tRNA hydrolase [Corynebacterium resistens DSM 45100]
Length = 220
Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 59/195 (30%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEI-------SEGQLDGL 54
+I+ GLGNP +Y RHN+G++ D++ A + + + L
Sbjct: 29 WIIIGLGNPSAKYATTRHNVGYIASDQLFEDLNTDATPLDYLRPVPGQNFCEARVHLGAH 88
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
+ +I+ TFMN SG+++ +Y +P E +V+HD+LD+ G +R+K GG + GHNG
Sbjct: 89 QLAIIRSHTFMNESGEAIKAASEYYGVPP-ERIIVLHDELDIPHGRVRVKLGGNENGHNG 147
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
LKS + + G ++Y R+R+GIGRPP +I HVL + +I +++ LL
Sbjct: 148 LKSTTAELGTRDYMRVRMGIGRPPQGQTVIDHVLSPI--EQGEVTDALIAETVQAVKLLV 205
Query: 174 KREDVSFLNHIVSVR 188
+ I + +
Sbjct: 206 TVGLQKAQHEIHTKK 220
>gi|217033871|ref|ZP_03439295.1| hypothetical protein HP9810_870g3 [Helicobacter pylori 98-10]
gi|216943634|gb|EEC23079.1| hypothetical protein HP9810_870g3 [Helicobacter pylori 98-10]
Length = 186
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLISELDLSFTFSSKHNACLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TKELLIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + ++ HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GMGVVEHVLSKFHKNEESLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|301612877|ref|XP_002935937.1| PREDICTED: probable peptidyl-tRNA hydrolase-like [Xenopus
(Silurana) tropicalis]
Length = 222
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 7/180 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWK--KKFHAEISEGQLDGLRTIL 58
+V GLGN + RH+IG ++++ WK ++ A++++ +DG+ +L
Sbjct: 29 LMVVGLGN--YRMAGTRHSIGMAVVNQLARRLNIADRWKADRQAGADLTDTDIDGMHVVL 86
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP+ FMNL+G+S+ ++L EN ++HD+LD G + LK GG GHNG++S
Sbjct: 87 MKPRQFMNLNGKSVANAATKFRLKP-ENIYLLHDELDKPLGKVSLKFGGSARGHNGVRSC 145
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+ RL +GIGRP D + + HVLG F+ E+ L +++ + K++
Sbjct: 146 ITCLQSDIMTRLLVGIGRPADCSSVEWHVLGRFNKAEQDLLPDVLERSVELVLTHIKQKT 205
>gi|108563841|ref|YP_628157.1| peptidyl-tRNA hydrolase [Helicobacter pylori HPAG1]
gi|119390949|sp|Q1CRD9|PTH_HELPH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|107837614|gb|ABF85483.1| peptidyl-tRNA hydrolase [Helicobacter pylori HPAG1]
Length = 186
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSPKHNACLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDL G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSTKNFYK---PKELLIVHDDLDLPLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GIGVIEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|227501517|ref|ZP_03931566.1| peptidyl-tRNA hydrolase [Corynebacterium accolens ATCC 49725]
gi|227077542|gb|EEI15505.1| peptidyl-tRNA hydrolase [Corynebacterium accolens ATCC 49725]
Length = 215
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 5/187 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCI-DRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+++ GLGNPG +Y RHN+G+M + D + + E++ + R + ++
Sbjct: 31 WLIIGLGNPGAKYAATRHNVGYMAVDDVLAQGGDVLEPVRGMDLEVAPLRWGDTRVLAVR 90
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
TFMNLSG + + + ++ +VIHD+LDL +RLK GG + GHNGLKS++
Sbjct: 91 TITFMNLSGDPIAPLARALGVA-ADHIIVIHDELDLPANKIRLKQGGNENGHNGLKSLTH 149
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G ++Y R+RIGI RPP + I +VL + I A + L+A + V
Sbjct: 150 NLGTRDYLRVRIGIARPPKGSSIPNYVLAPVDAG--PGFDTAIATAAEAAQLIATQGLVQ 207
Query: 180 FLNHIVS 186
N I S
Sbjct: 208 AQNRIHS 214
>gi|297380648|gb|ADI35535.1| peptidyl-tRNA hydrolase [Helicobacter pylori v225d]
Length = 184
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSPKHNACLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TKELLIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + ++ HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GMGVVEHVLSKFHKNEEPLKTAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|109948224|ref|YP_665452.1| peptidyl-tRNA hydrolase [Helicobacter acinonychis str. Sheeba]
gi|123066069|sp|Q17V73|PTH_HELAH RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|109715445|emb|CAK00453.1| pth [Helicobacter acinonychis str. Sheeba]
Length = 186
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN+GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNVGFDILDSLVSGLNLSFTFSPKHNAHLCIYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDL G ++ K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSTKNFYK---PKELLIVHDDLDLPLGVVKFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C Y RLR+GI + + HVL F+ E + ++ +L + D +
Sbjct: 114 ALCSNAYYRLRVGISK---GTNATEHVLSKFNENEEPLKNAVFEHAKNALKFFIECNDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMCNHFTLKK 180
>gi|317178202|dbj|BAJ55991.1| peptidyl-tRNA hydrolase [Helicobacter pylori F16]
Length = 186
Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLISELDLSFTFSSKHNACLCIYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TKELLIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + ++ HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GMGVVEHVLSKFHKNEEPLKNAVFEHAKNALKFFTESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|307638153|gb|ADN80603.1| Peptidyl-tRNA hydrolase [Helicobacter pylori 908]
gi|325996752|gb|ADZ52157.1| Peptidyl-tRNA hydrolase [Helicobacter pylori 2018]
gi|325998347|gb|ADZ50555.1| Peptidyl-tRNA hydrolase [Helicobacter pylori 2017]
Length = 186
Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSSKHNAYLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDL G ++ K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---PKELLIVHDDLDLPLGVVKFKKGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F + E ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GFNITEHVLSKFHNNEEPLKNAAFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|213855842|ref|ZP_03384082.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 148
Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats.
Identities = 59/146 (40%), Positives = 81/146 (55%), Gaps = 4/146 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L+G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHNGLK I
Sbjct: 64 PTTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIS 122
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIR 144
K G N+ RLR+GIG P D ++
Sbjct: 123 KLGNNPNFHRLRVGIGHPGDKNKVVG 148
>gi|308064257|gb|ADO06144.1| peptidyl-tRNA hydrolase [Helicobacter pylori Sat464]
Length = 186
Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLISELDLSFTFSPKHNACLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TKELLIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + ++ HVL F E ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GMGVVEHVLSKFHKNEEPLKNAAFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|251772228|gb|EES52798.1| Aminoacyl-tRNA hydrolase [Leptospirillum ferrodiazotrophum]
Length = 185
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 12/188 (6%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
V GLGNPG++Y RHN G + +D + S P KK+ EG G R L+ P+T
Sbjct: 5 VIGLGNPGNDYEGTRHNAGKILLDHVSSLSGIPLEKKQGEIRFGEGVWRGERVYLVFPET 64
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
FMNLSG+ ++ + + + + ++L++ DDLD FG +R + GG G G++SI + G
Sbjct: 65 FMNLSGR-VVPWLRLHGVESPSDWLILSDDLDTPFGMVRFREKGGSGGQRGIRSILQAAG 123
Query: 124 KN-YKRLRIGIGRPPD-TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
R++ GIGRP A I ++VL F+ ER + ++ N + +
Sbjct: 124 SEAIARVKFGIGRPIQIGADISQYVLSPFTREERLRIPELLQNGGVLVERWVE------- 176
Query: 182 NHIVSVRK 189
S++K
Sbjct: 177 --AHSLKK 182
>gi|302338329|ref|YP_003803535.1| peptidyl-tRNA hydrolase [Spirochaeta smaragdinae DSM 11293]
gi|301635514|gb|ADK80941.1| peptidyl-tRNA hydrolase [Spirochaeta smaragdinae DSM 11293]
Length = 197
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 7/179 (3%)
Query: 5 AGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHA--EISEGQLDGLRTILIKPQ 62
GLGNPG +Y E RHN+GF+ ++ + W+K F + + + L++P
Sbjct: 7 IGLGNPGPQYRETRHNVGFLVLEALAKEFGVE-WRKPFFSPYRFARHRHSNAMLFLVQPL 65
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
TFMN SG L ++ + E+ ++ D+LDL G +R++ GG DAGHNGLKS+
Sbjct: 66 TFMNRSGDVLSAILKKSG-ASSESMFLVCDNLDLAPGQVRIRMGGSDAGHNGLKSVIAAA 124
Query: 123 GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSS-PERYFLLPIIDNIARSLPLLAKREDVS 179
G + R+ +GIGRP I+ HVLG S E+ + I A ++ L + E++
Sbjct: 125 GTGEFLRIYVGIGRPKG-GTIVDHVLGIPSEGEEQEAVDAGIARAAEAVTQLVEGEELQ 182
>gi|73968190|ref|XP_537833.2| PREDICTED: hypothetical protein XP_537833 [Canis familiaris]
Length = 222
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP---AWKKKFHAEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ A ++ A+++ LD + +L
Sbjct: 31 WLVAGLGNPGLP--STRHSVGLAVLGQLARRLGVADGWARDRRCAADLALASLDDAQLVL 88
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN +G+S+ + L E ++HD+LD G L LK GG GHNG++S
Sbjct: 89 LRPRRLMNANGRSVARAAELFGL-TAEEVYLVHDELDKPLGKLALKLGGSSRGHNGVRSC 147
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
+ RLR+GIGRP + + +VLG FS+ E+ L P+++
Sbjct: 148 ISCLNSSAMPRLRVGIGRPTEPDTVKAYVLGCFSAAEQELLPPLLERATD 197
>gi|207091760|ref|ZP_03239547.1| peptidyl-tRNA hydrolase [Helicobacter pylori HPKX_438_AG0C1]
Length = 186
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFAFSPKHNAYLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDL G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TKELLIVHDDLDLPLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GIGVIEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|33239733|ref|NP_874675.1| peptidyl-tRNA hydrolase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|46576740|sp|Q7VDT7|PTH_PROMA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|33237258|gb|AAP99327.1| Peptidyl-tRNA hydrolase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 204
Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats.
Identities = 66/191 (34%), Positives = 102/191 (53%), Gaps = 8/191 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++AGLGNPG +Y RHN+GFM ++R+ A KK I+ ++ + L+ P
Sbjct: 8 LLAGLGNPGSKYTSTRHNVGFMALERLAKKESVQFAMNKKIFGHIANIEIGANKRKLLMP 67
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S+ + ++ L + L+ DD+DL G LR + GGG GHNGLK I +
Sbjct: 68 NTYMNESGRSISAAIKWFDL-EINQILIFVDDMDLPLGKLRFREGGGSGGHNGLKDIIKH 126
Query: 122 CG-KNYKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G +++ RLRIGIG P I HVLG F E + ++D + + L ++ +
Sbjct: 127 LGSQDFCRLRIGIGPPSINQGDRKQKTIPHVLGKFDQAESKVITKVLDKVIKGLEVIEQY 186
Query: 176 EDVSFLNHIVS 186
V + + S
Sbjct: 187 GLVKGTSFLNS 197
>gi|297271264|ref|XP_001095651.2| PREDICTED: probable peptidyl-tRNA hydrolase-like isoform 2 [Macaca
mulatta]
Length = 228
Score = 177 bits (451), Expect = 4e-43, Method: Composition-based stats.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 7/170 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFH--AEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W + H A+++ L + +L
Sbjct: 45 WMVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 102
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN +G+S+ + L E ++HD+LD G L LK GG GHNG++S
Sbjct: 103 LRPRRLMNANGRSVARAAELFGL-TAEEVYLVHDELDKPLGRLALKLGGSARGHNGVRSC 161
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
N RLR+GIGRP + HVLG FS E+ L ++D
Sbjct: 162 ISCLNSNAMPRLRVGIGRPTHPEAVQAHVLGCFSPAEQELLPLLLDRATD 211
>gi|261840173|gb|ACX99938.1| peptidyl-tRNA hydrolase [Helicobacter pylori 52]
Length = 186
Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSSKHNACLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TKELLIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GMGVIEHVLSKFHKNEELLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|119608092|gb|EAW87686.1| peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae), isoform CRA_b
[Homo sapiens]
Length = 227
Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 7/170 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFH--AEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W + H A+++ L + +L
Sbjct: 44 WMVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 101
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN +G+S+ + L E ++HD+LD G L LK GG GHNG++S
Sbjct: 102 LRPRRLMNANGRSVARAAELFGL-TAEEVYLVHDELDKPLGRLALKLGGSARGHNGVRSC 160
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
N RLR+GIGRP + HVLG FS E+ L ++D
Sbjct: 161 ISCLNSNAMPRLRVGIGRPAHPEAVQAHVLGCFSPAEQELLPLLLDRATD 210
>gi|29840576|ref|NP_829682.1| peptidyl-tRNA hydrolase [Chlamydophila caviae GPIC]
gi|33301429|sp|Q821W6|PTH_CHLCV RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|29834926|gb|AAP05560.1| peptidyl-tRNA hydrolase [Chlamydophila caviae GPIC]
Length = 183
Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats.
Identities = 56/169 (33%), Positives = 98/169 (57%), Gaps = 5/169 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILI 59
++ +GNPG +Y RHNIGF+C D++ +K +K ++I++ + + I
Sbjct: 3 MLIVAIGNPGRQYTWTRHNIGFLCADKLLQGFPEAQFKEARKLFSDIAKVESPQGSMVFI 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+T++NLSG+++ V +Y +P ++ LV+ DD++ FG +RL+ G GH G+KSI+
Sbjct: 63 KPRTYVNLSGKAVSAVKEYYGIP-IDRILVLADDVNHPFGNVRLRQNAGGGGHKGIKSIT 121
Query: 120 EKCG-KNYKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIA 166
+ G +Y +LR+GIGRP + VLG F+ E+ + + +
Sbjct: 122 QSLGSNDYWQLRLGIGRPQREDIELSDFVLGQFTEEEQIGIQSLFIEAS 170
>gi|15646106|ref|NP_208288.1| peptidyl-tRNA hydrolase [Helicobacter pylori 26695]
gi|2499985|sp|P56077|PTH_HELPY RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|2314676|gb|AAD08538.1| peptidyl-tRNA hydrolase (pth) [Helicobacter pylori 26695]
Length = 186
Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 100/190 (52%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSPKHNAFLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDL G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TKELLIVHDDLDLPLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GIGVIEHVLSKFHKNEEPLKNAAFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ + +++K
Sbjct: 171 AMQNRFTLKK 180
>gi|89898002|ref|YP_515112.1| peptidyl-tRNA hydrolase [Chlamydophila felis Fe/C-56]
gi|119390923|sp|Q255S1|PTH_CHLFF RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|89331374|dbj|BAE80967.1| tRNA hydrolase peptidyl [Chlamydophila felis Fe/C-56]
Length = 183
Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats.
Identities = 58/168 (34%), Positives = 97/168 (57%), Gaps = 5/168 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILI 59
+V +GNPG +Y RHNIGF+C DR+ +K+ K ++I++ + I I
Sbjct: 3 MLVVAIGNPGRQYTWTRHNIGFLCADRLLQEFSGVHFKETPKLFSDIAKVESSQGTVIFI 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP+T++NLSG+++L V +Y + + LV+ DD++ FG +RL+ G GH G+KSI+
Sbjct: 63 KPRTYVNLSGKAVLAVKEYYNIAT-DRILVLADDVNQPFGKVRLRQSAGGGGHKGIKSIT 121
Query: 120 EKCG-KNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDNI 165
+ G +Y +LR+G+GRP + + VLG F+ E+ + +
Sbjct: 122 QSLGSNDYWQLRLGVGRPQREDVELSDFVLGQFTEEEQIGIQSLFIEA 169
>gi|50897284|ref|NP_001002913.1| probable peptidyl-tRNA hydrolase [Homo sapiens]
gi|114626791|ref|XP_520273.2| PREDICTED: peptidyl-tRNA hydrolase 1 homolog isoform 4 [Pan
troglodytes]
gi|74750555|sp|Q86Y79|PTH_HUMAN RecName: Full=Probable peptidyl-tRNA hydrolase; Short=PTH
gi|28422548|gb|AAH47012.1| Peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) [Homo sapiens]
gi|313882314|gb|ADR82643.1| peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) [synthetic
construct]
Length = 214
Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 7/170 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFH--AEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W + H A+++ L + +L
Sbjct: 31 WMVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 88
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN +G+S+ + L E ++HD+LD G L LK GG GHNG++S
Sbjct: 89 LRPRRLMNANGRSVARAAELFGL-TAEEVYLVHDELDKPLGRLALKLGGSARGHNGVRSC 147
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
N RLR+GIGRP + HVLG FS E+ L ++D
Sbjct: 148 ISCLNSNAMPRLRVGIGRPAHPEAVQAHVLGCFSPAEQELLPLLLDRATD 197
>gi|206602647|gb|EDZ39128.1| Peptidyl-tRNA hydrolase [Leptospirillum sp. Group II '5-way CG']
Length = 187
Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 2/159 (1%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
+ GLGNPG EY RHN G + +D + P +K + EG+ G + IL+ P T
Sbjct: 6 IIGLGNPGREYERTRHNAGKIFLDSLSERVGIPLNHQKPIVQWGEGEWKGEKLILVFPLT 65
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
+MNLSG+ ++ + + ++ LVI DD+D+ G LR + G G GL SI + G
Sbjct: 66 YMNLSGK-VIPWLRMKGVHLPDDLLVILDDMDIPLGMLRFREKGRSGGQKGLSSIIDALG 124
Query: 124 KN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPI 161
+ R++IGIGRP + +VLG E L
Sbjct: 125 GDRISRIKIGIGRPIEGQDPSDYVLGALHPEESRLLEKA 163
>gi|62185393|ref|YP_220178.1| peptidyl-tRNA hydrolase [Chlamydophila abortus S26/3]
gi|81312457|sp|Q5L564|PTH_CHLAB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|62148460|emb|CAH64230.1| peptidyl-tRNA hydrolase [Chlamydophila abortus S26/3]
Length = 183
Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats.
Identities = 58/168 (34%), Positives = 99/168 (58%), Gaps = 5/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
+V +GNPG +Y RHN+GF+C+DR+ +K+ K ++I++ + + IK
Sbjct: 4 LVVAIGNPGRQYVWTRHNVGFLCVDRLVQQFPGVHFKEAPKLFSDIAKVESSQGSMVFIK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T++NLSG+++L V +Y + + LVI DD++ FG +RL+ G GH G+KSI++
Sbjct: 64 PRTYVNLSGKAVLAVKGYYNIAT-DRILVIADDVNQPFGNVRLRQSAGGGGHKGIKSITQ 122
Query: 121 KCG-KNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
G +Y +LR+GIGRP + + VLG F+ E+ + + +
Sbjct: 123 SLGSNDYWQLRLGIGRPQRENVELSDFVLGQFTEEEQIGIQSVFIEAS 170
>gi|296125817|ref|YP_003633069.1| aminoacyl-tRNA hydrolase [Brachyspira murdochii DSM 12563]
gi|296017633|gb|ADG70870.1| Aminoacyl-tRNA hydrolase [Brachyspira murdochii DSM 12563]
Length = 196
Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 60/184 (32%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNPG +Y +RHN+G+M +DR+ KK G+ + +L+K
Sbjct: 2 MKLVMGLGNPGEQYKNHRHNVGYMILDRVAKKLNVELDIKKKKTVFGRGKHGKMEYLLLK 61
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG--------- 111
P TFMNLSG++ L + +F K+ +EN +VI+DD + G R+ D
Sbjct: 62 PLTFMNLSGEAALYMASFMKI-TVENIIVIYDDTSVPIGEFRVIPSKTDDSEEDTEEYTI 120
Query: 112 -HNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
HNG+KSI E N+ ++ +GIG P+ +L FS ER + I D++ +
Sbjct: 121 DHNGIKSIRESLKSYNFTKIGVGIGACPENEEKADFLLAPFSKDERKKIKDISDSVVDAA 180
Query: 170 PLLA 173
+
Sbjct: 181 CIAL 184
>gi|321309591|ref|YP_004191920.1| peptidyl-tRNA hydrolase [Mycoplasma haemofelis str. Langford 1]
gi|319801435|emb|CBY92081.1| peptidyl-tRNA hydrolase [Mycoplasma haemofelis str. Langford 1]
Length = 188
Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 64/189 (33%), Positives = 97/189 (51%), Gaps = 5/189 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG +Y HN+GF+ ID + S + + F + + D +
Sbjct: 1 MKVIVGLGNPGDKYERTHHNVGFLSIDYLVSQNLSSNVPNRSFKSLLYWLNNDSESVVFC 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQTFMNLSG++L E+ +FYKL ++LVI+DDL L+ G ++L G AGHNG+K+I
Sbjct: 61 KPQTFMNLSGEALREIKSFYKL-QNSDFLVIYDDLYLETGRIKLSLNKGPAGHNGIKNIV 119
Query: 120 EKC-GKNYKRLRIGIG-RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-E 176
++ G ++ +LR+GIG R I VL S + + + L K
Sbjct: 120 KELDGNDFLKLRVGIGPRSKIENSIADFVLSRISDSDLEKIRLCFPKMQELLMSFLKGLS 179
Query: 177 DVSFLNHIV 185
+N
Sbjct: 180 PDQLMNEFN 188
>gi|114330911|ref|YP_747133.1| peptidyl-tRNA hydrolase [Nitrosomonas eutropha C91]
gi|114307925|gb|ABI59168.1| peptidyl-tRNA hydrolase [Nitrosomonas eutropha C91]
Length = 617
Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 62/183 (33%), Positives = 93/183 (50%), Gaps = 8/183 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
I+ GLGNPG EY HNIG+ +D + H W++ +I QL+ L K
Sbjct: 442 IIVGLGNPGAEYKNTPHNIGYFVLDSLAENHGA-IWQETDEGQICSIQLESKPVSLFKAT 500
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
+MN +G L + E +++HDD D++FG + +K+ GGDAGH G++S
Sbjct: 501 AYMNETGPKLQRYLAKTGCLP-EQCIIVHDDTDIEFGKIYIKSDGGDAGHWGVRSCLVAL 559
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G + KRLR+G+G P T R VL NFS E+ L I+++ + + +S
Sbjct: 560 GTDQVKRLRLGVGVPGKTGSAKRRVLTNFSQEEQQRLQQIVEDAV-----VILGKTLSAF 614
Query: 182 NHI 184
N I
Sbjct: 615 NSI 617
>gi|76630832|ref|XP_582005.2| PREDICTED: peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)-like
isoform 2 [Bos taurus]
gi|297480754|ref|XP_002691673.1| PREDICTED: peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)-like
isoform 1 [Bos taurus]
gi|296482109|gb|DAA24224.1| peptidyl-tRNA hydrolase 1 homolog-like isoform 1 [Bos taurus]
Length = 225
Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 18/181 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKK--KFHAEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W++ + A++++ L + +L
Sbjct: 31 WLVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWERDRRCAADLAQASLGDAQLVL 88
Query: 59 IKPQTFMNLSGQSLLEVM-----------NFYKLPNLENYLVIHDDLDLDFGTLRLKTGG 107
++P+ MNL+G S+ + + + L E ++HD+LD G + LK GG
Sbjct: 89 LRPRRLMNLNGHSVAQAVVTGATVSLGQVELFGL-TAEEVYLVHDELDKPLGKVALKLGG 147
Query: 108 GDAGHNGLKSISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
GHNG++S N RL++GIGRP + +VLG FS E+ L P+++
Sbjct: 148 SARGHNGVRSCMSCLNSNAMPRLQVGIGRPTHRDAVQAYVLGRFSPAEQELLPPVLERAV 207
Query: 167 R 167
Sbjct: 208 D 208
>gi|160902896|ref|YP_001568477.1| aminoacyl-tRNA hydrolase [Petrotoga mobilis SJ95]
gi|160360540|gb|ABX32154.1| Aminoacyl-tRNA hydrolase [Petrotoga mobilis SJ95]
Length = 191
Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 5/186 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+V GLGNPG Y +HN+GF+ +D+ + KK + EG I IKP
Sbjct: 4 LVIGLGNPGPRYVFTKHNVGFLALDKYEENKKNISNIKKISGKNFEG-FSIENDIFIKPL 62
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG+ L V + E+ ++I+DD+ L+ G +R++ G D GHNGLKSI
Sbjct: 63 TYMNASGEVLPYVFKKFG-KIEESLVIIYDDIWLNLGEIRIRKNGSDGGHNGLKSIIAIL 121
Query: 123 -GKNYKRLRIGI--GRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
++ R+RIGI G + ++ +VL F+ E L +D + ++ L+ +
Sbjct: 122 KSTDFPRIRIGINNGYEHGSGNLANYVLTPFTQEEWIILDKALDYVTITIDLILEGRINE 181
Query: 180 FLNHIV 185
+N
Sbjct: 182 AMNKFN 187
>gi|329943159|ref|ZP_08291933.1| peptidyl-tRNA hydrolase [Chlamydophila psittaci Cal10]
gi|313848312|emb|CBY17315.1| peptidyl-tRNA hydrolase [Chlamydophila psittaci RD1]
gi|325507165|gb|ADZ18803.1| peptidyl-tRNA hydrolase [Chlamydophila psittaci 6BC]
gi|328814706|gb|EGF84696.1| peptidyl-tRNA hydrolase [Chlamydophila psittaci Cal10]
gi|328914995|gb|AEB55828.1| peptidyl-tRNA hydrolase [Chlamydophila psittaci 6BC]
Length = 183
Score = 175 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 59/168 (35%), Positives = 99/168 (58%), Gaps = 5/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK--KFHAEISEGQLDGLRTILIK 60
+V +GNPG +Y RHNIGF+C+DR+ +K+ K ++I++ + + IK
Sbjct: 4 LVVAIGNPGRQYIWTRHNIGFLCVDRLVQQFPGVHFKEAPKLFSDIAKVESSQGSMVFIK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T++NLSG+++L V +Y + + LVI DD++ FG +RL+ G GH G+KSI++
Sbjct: 64 PRTYVNLSGKAVLAVKGYYNIAT-DRILVIADDVNQPFGNIRLRQSAGGGGHKGIKSITQ 122
Query: 121 KCG-KNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
G +Y +LR+GIGRP + + VLG F+ E+ + + +
Sbjct: 123 SLGSNDYWQLRLGIGRPQRENVELSDFVLGQFTEEEQIGIQSLFIEAS 170
>gi|51246584|ref|YP_066468.1| peptidyl-tRNA hydrolase [Desulfotalea psychrophila LSv54]
gi|50877621|emb|CAG37461.1| related to peptidyl-tRNA hydrolase (PTH) [Desulfotalea psychrophila
LSv54]
Length = 215
Score = 175 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 65/193 (33%), Positives = 108/193 (55%), Gaps = 7/193 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY + RHN G + +D + S +K+++ + ++ G L++P
Sbjct: 24 YLLVGLGNPGREYQDTRHNAGSLLLDDLSSRWSGSNSIEKYNSTFRKARVAGNSLALMQP 83
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG ++ E + F+K+ EN +VIHDD+D+ G ++L GGG GHNG+KSI+
Sbjct: 84 LTYMNRSGLAVAEYVRFFKIV-AENIIVIHDDIDMAPGRVKLVRGGGAGGHNGIKSINSS 142
Query: 122 CG-KNYKRLRIGIGRPPDTA-----HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G +Y RL+IG+GRP + ++VL FS+ + ++ D IA L +
Sbjct: 143 LGFVDYYRLKIGVGRPGKHGIHPEIPVDKYVLAPFSAEQLDIIVGRYDAIAAGLETFFRD 202
Query: 176 EDVSFLNHIVSVR 188
+ + S+R
Sbjct: 203 SPAAAATVLNSLR 215
>gi|68052930|sp|Q6AJL9|PTH_DESPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
Length = 197
Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 65/193 (33%), Positives = 108/193 (55%), Gaps = 7/193 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG EY + RHN G + +D + S +K+++ + ++ G L++P
Sbjct: 6 YLLVGLGNPGREYQDTRHNAGSLLLDDLSSRWSGSNSIEKYNSTFRKARVAGNSLALMQP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG ++ E + F+K+ EN +VIHDD+D+ G ++L GGG GHNG+KSI+
Sbjct: 66 LTYMNRSGLAVAEYVRFFKIV-AENIIVIHDDIDMAPGRVKLVRGGGAGGHNGIKSINSS 124
Query: 122 CG-KNYKRLRIGIGRPPDTA-----HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
G +Y RL+IG+GRP + ++VL FS+ + ++ D IA L +
Sbjct: 125 LGFVDYYRLKIGVGRPGKHGIHPEIPVDKYVLAPFSAEQLDIIVGRYDAIAAGLETFFRD 184
Query: 176 EDVSFLNHIVSVR 188
+ + S+R
Sbjct: 185 SPAAAATVLNSLR 197
>gi|15618859|ref|NP_225145.1| peptidyl-tRNA hydrolase [Chlamydophila pneumoniae CWL029]
gi|15836483|ref|NP_301007.1| peptidyl-tRNA hydrolase [Chlamydophila pneumoniae J138]
gi|16752080|ref|NP_445446.1| peptidyl-tRNA hydrolase [Chlamydophila pneumoniae AR39]
gi|33242318|ref|NP_877259.1| peptidyl-tRNA hydrolase [Chlamydophila pneumoniae TW-183]
gi|6647699|sp|Q9Z6V6|PTH_CHLPN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|4377275|gb|AAD19088.1| Peptidyl tRNA Hydrolase [Chlamydophila pneumoniae CWL029]
gi|7189822|gb|AAF38694.1| peptidyl-tRNA hydrolase [Chlamydophila pneumoniae AR39]
gi|8979324|dbj|BAA99158.1| peptidyl tRNA hydrolase [Chlamydophila pneumoniae J138]
gi|33236829|gb|AAP98916.1| peptidyl tRNA hydrolase [Chlamydophila pneumoniae TW-183]
Length = 180
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 63/169 (37%), Positives = 91/169 (53%), Gaps = 5/169 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLDGLRTILI 59
++ +GNP H Y RHN GF+ DR+ P +K K HA ++ + + I
Sbjct: 3 KLIVAIGNPRHGYANTRHNAGFLLADRLVEELQGPPFKPLSKCHALMTLVESSSGPLVFI 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TF+NLSG++++ ++ + L + LV+ DD++ FG LRL GG GHNGLKSI+
Sbjct: 63 KPTTFVNLSGKAVVLAKKYFNVA-LSHILVLADDVNRSFGKLRLCFNGGSGGHNGLKSIT 121
Query: 120 EKCGKN-YKRLRIGIGRP-PDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
G N Y +LR G+GRP + + VLG FS E L I +
Sbjct: 122 ASLGSNEYWQLRFGVGRPLEEGVELSNFVLGKFSEEENLQLGSIFVEAS 170
>gi|328947529|ref|YP_004364866.1| peptidyl-tRNA hydrolase [Treponema succinifaciens DSM 2489]
gi|328447853|gb|AEB13569.1| Peptidyl-tRNA hydrolase [Treponema succinifaciens DSM 2489]
Length = 220
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 30/190 (15%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG--------- 53
++A LGN G EY RHN+ ++ +++ F +W+ K +E S +
Sbjct: 4 LIAFLGNYGKEYSGTRHNVPWIFEEQL-PFASKISWQSKHKSEFSCVDYEDFLNWLKDFS 62
Query: 54 -----------------LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDL 96
+ +KP T+MNLSG+++ E F+K+ EN L++HD+++L
Sbjct: 63 LIKLRQDGTLPIASNVPDKIYFMKPLTYMNLSGEAVGEAARFFKIKP-ENILILHDEIEL 121
Query: 97 DFGTLRLKTGGGDAGHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
GT+ LK GG GHNGL+SI E G ++ RLR G+G+P + VLG FS E+
Sbjct: 122 PLGTVSLKWSGGLGGHNGLRSIKEHLGTADFWRLRFGVGKPVH-GSVADFVLGIFSEDEK 180
Query: 156 YFLLPIIDNI 165
L +
Sbjct: 181 IILSQVFSQA 190
>gi|289523177|ref|ZP_06440031.1| aminoacyl-tRNA hydrolase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503720|gb|EFD24884.1| aminoacyl-tRNA hydrolase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 175
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Query: 17 NRHNIGFMCIDRIHSFHF-FPAWKKKFHAE-ISEGQLDGLRTILIKPQTFMNLSGQSLLE 74
RHN+G++ +D + F ++ + + ++G R L+KP TFMNLSG+S+++
Sbjct: 2 TRHNVGWLAMDALLEKLNKFAGFQYRCNGMMWGPLDVEGERVYLLKPLTFMNLSGRSVVQ 61
Query: 75 VMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK-NYKRLRIGI 133
+ + N L+++DD+ L FG LRL+ G GHNG+ S+ G RLRIG
Sbjct: 62 AKRELNI-DNNNILIVYDDIYLPFGKLRLRAKGSAGGHNGMASVIGALGTLEIPRLRIGT 120
Query: 134 GRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVS 186
GR +I VL F E L +++ A+++ + ++++ S
Sbjct: 121 GREEPIEDLIGFVLSPFDEEEMKALPDVLERAAKAILAWVTMDIEHAISYVNS 173
>gi|149038990|gb|EDL93210.1| rCG45678, isoform CRA_b [Rattus norvegicus]
Length = 204
Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats.
Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 7/170 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP---AWKKKFHAEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + +I A + A+++ + +L
Sbjct: 21 WLVAGLGNPG--MPGTRHSVGMAVLGQIAQRLGVAENWARDSRCAADLALAPFGDAQLVL 78
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN++G+S+ + + L + E ++HD+LD G L LK GG GHNG++S
Sbjct: 79 LRPRRLMNVNGRSVAKAAELFGL-SAEEIYLVHDELDKPLGKLALKLGGSARGHNGVRSC 137
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
N RL +GIGRP + HVLG FS E+ L P++D
Sbjct: 138 ISCLNSNAMPRLLVGIGRPTHPNMVETHVLGCFSPEEQELLSPLMDQATD 187
>gi|15834803|ref|NP_296562.1| peptidyl-tRNA hydrolase [Chlamydia muridarum Nigg]
gi|270284969|ref|ZP_06194363.1| peptidyl-tRNA hydrolase [Chlamydia muridarum Nigg]
gi|270288993|ref|ZP_06195295.1| peptidyl-tRNA hydrolase [Chlamydia muridarum Weiss]
gi|301336366|ref|ZP_07224568.1| peptidyl-tRNA hydrolase [Chlamydia muridarum MopnTet14]
gi|7404431|sp|P49607|PTH_CHLMU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|7190220|gb|AAF39057.1| peptidyl-tRNA hydrolase [Chlamydia muridarum Nigg]
Length = 179
Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 97/172 (56%), Gaps = 5/172 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
+V G+GNPG +Y RHNIGF+ +D + S + + + + +LIK
Sbjct: 3 KLVVGIGNPGRQYVWTRHNIGFLFLDMLASRFSGAFREAPRLFSSFMKVETSCGVIVLIK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T++NL+G+++L F+ + ++E L++ DD++ +FG++R + G GHNGLK+ ++
Sbjct: 63 PSTYVNLTGKAVLAAKRFFGV-SVEGILIVADDINREFGSIRFRQDCGAGGHNGLKNTTQ 121
Query: 121 KCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
N Y +LR+G+GRP P++ + +VL NFS ER L + +
Sbjct: 122 VLQSNHYWQLRLGVGRPSNPESEGVADYVLSNFSFNERKSLNGFFEKGIEEI 173
>gi|47227662|emb|CAG09659.1| unnamed protein product [Tetraodon nigroviridis]
Length = 232
Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 8/170 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWK--KKFHAEISEGQLDGLRTIL 58
+V GLGNPG RH++G + + + W+ K E+ + +L
Sbjct: 61 KLVVGLGNPG--MDGTRHSVGMAVLGALAARLRVADRWRPDKHVSGEV-IVCEEPTSVVL 117
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN++G S+ Y + E+ L++HD+LD G + +K GG GHNG++S
Sbjct: 118 LRPRLLMNVNGVSVARAAGKYGI-QPEDILLVHDELDKPLGKISIKQGGSPRGHNGVRSC 176
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
+ + RLR+GIGRP + + RHVLG FS E+ L ++
Sbjct: 177 IDCLQTDVMPRLRVGIGRPAGKSSVERHVLGRFSCEEKKVLDSVLLQSVD 226
>gi|114626795|ref|XP_001150716.1| PREDICTED: peptidyl-tRNA hydrolase 1 homolog isoform 2 [Pan
troglodytes]
Length = 221
Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 7/168 (4%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFH--AEISEGQLDGLRTILIK 60
VAGLGNPG RH++G + ++ +W + H A+++ L + +L++
Sbjct: 40 VAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVLLR 97
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ MN +G+S+ + L E ++HD+LD G L LK GG GHNG++S
Sbjct: 98 PRRLMNANGRSVARAAELFGL-TAEEVYLVHDELDKPLGRLALKLGGSARGHNGVRSCIS 156
Query: 121 KCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
N RLR+GIGRP + HVLG FS E+ L ++D
Sbjct: 157 CLNSNAMPRLRVGIGRPAHPEAVQAHVLGCFSPAEQELLPLLLDRATD 204
>gi|317181180|dbj|BAJ58966.1| peptidyl-tRNA hydrolase [Helicobacter pylori F32]
Length = 186
Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 100/190 (52%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSELDLSFTFSPKHNACLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDL G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSTKNFYK---TKELLIVHDDLDLPLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F E + ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GIGVIEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ +++K
Sbjct: 171 ATQNRFTLKK 180
>gi|15612455|ref|NP_224108.1| peptidyl-tRNA hydrolase [Helicobacter pylori J99]
gi|7388027|sp|Q9ZJC3|PTH_HELPJ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|4156010|gb|AAD06971.1| PEPTIDYL-TRNA HYDROLASE [Helicobacter pylori J99]
Length = 186
Score = 173 bits (440), Expect = 8e-42, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYDHTRHNAGFDILDSLVSELDLSFIFSPKHNAYLCVYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDL G ++ K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TKELLIVHDDLDLPLGVVKFKKGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F + E ++ +L + D +
Sbjct: 114 ALCSNSYYRLRVGISK---GINITEHVLSKFHNNEEPLKNAAFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ +++K
Sbjct: 171 ATQNRFTLKK 180
>gi|325969879|ref|YP_004246070.1| peptidyl-tRNA hydrolase [Spirochaeta sp. Buddy]
gi|324025117|gb|ADY11876.1| Peptidyl-tRNA hydrolase [Spirochaeta sp. Buddy]
Length = 176
Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats.
Identities = 71/167 (42%), Positives = 96/167 (57%), Gaps = 10/167 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ LGNPG Y RHNIG+M + + + +W +KFH +S L L+KP
Sbjct: 3 KLLVFLGNPGKAYARTRHNIGWMVAEHL---YPNQSWSEKFHGLVSTA----LTLKLLKP 55
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MN SG+S+ M+FY + E LVIHDDL+L +GTLRL+ GGG GHNGLKSI
Sbjct: 56 TTYMNESGRSVRACMDFYGY-SAEEILVIHDDLELPYGTLRLQKGGGLGGHNGLKSIKAH 114
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
+ + RLRIGIGRP + VL F+S E L +I+ +
Sbjct: 115 AQSDQFSRLRIGIGRPVH-GSVASFVLERFTSDEEISLPLVINLAEK 160
>gi|291408311|ref|XP_002720515.1| PREDICTED: peptidyl-tRNA hydrolase 1 homolog [Oryctolagus
cuniculus]
Length = 231
Score = 173 bits (440), Expect = 9e-42, Method: Composition-based stats.
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 7/170 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKK--KFHAEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W + + A+++ L + +L
Sbjct: 48 WLVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWARDPRCAADLALAPLGDAQLVL 105
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN +G+S+ + L + ++HD+LD G L LK GG GHNG+ S
Sbjct: 106 LRPRRLMNSNGRSVARAAELFGL-TADAVYLVHDELDKPLGKLALKLGGSARGHNGVCSC 164
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
+ RLR+GIGRP + HVLG FS E+ L ++D
Sbjct: 165 ISCLNSSAMPRLRVGIGRPATADAVQAHVLGRFSPAEQELLPLLLDRATD 214
>gi|320532197|ref|ZP_08033063.1| peptidyl-tRNA hydrolase [Actinomyces sp. oral taxon 171 str. F0337]
gi|320135575|gb|EFW27657.1| peptidyl-tRNA hydrolase [Actinomyces sp. oral taxon 171 str. F0337]
Length = 184
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 96/184 (52%), Gaps = 9/184 (4%)
Query: 14 YCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLD-------GLRTILIKPQTFM 65
Y NRHN+G++ +D + + KK A ++EG+L G R IL +P M
Sbjct: 1 YARNRHNVGYLVLDVLAERTGSRFSQHKKARARVAEGRLGMMPGGAPGPRVILAEPSVLM 60
Query: 66 NLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-K 124
NLSG + ++++Y + LV+HD+LDL LRLK GGG+ GHNGL+SIS+ K
Sbjct: 61 NLSGGPVAGLVSYYGIDPASRLLVVHDELDLPAHDLRLKRGGGEGGHNGLRSISKSVSTK 120
Query: 125 NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHI 184
+Y RLR+GIGRPP VL +F ER L ++ A ++ + +
Sbjct: 121 DYARLRVGIGRPPGRQDPSDFVLSDFPGRERADLGVTLEQAADAVEQVVTAGFDDAQQRL 180
Query: 185 VSVR 188
+ R
Sbjct: 181 HAPR 184
>gi|325000633|ref|ZP_08121745.1| peptidyl-tRNA hydrolase [Pseudonocardia sp. P1]
Length = 197
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 68/160 (42%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW--KKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG EY RHN+G + + + K+ +A++++G+L G +
Sbjct: 9 LVVGLGNPGPEYEGTRHNVGTRVAALLAARAGAGRFSVHKRSNADVAQGRLAGRPVTVAV 68
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+T+MNLSG + ++ ++ +P E +VIHD+LDLDFG +RLK GGG+ GHNGL+SIS
Sbjct: 69 PRTYMNLSGGPVTGLVKYFSVPPTE-VIVIHDELDLDFGVVRLKRGGGEGGHNGLRSISR 127
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL 159
G K+Y R+R GIGRPP +VL FS E L
Sbjct: 128 SLGTKDYLRVRFGIGRPPGRQDPADYVLKRFSGAENKELD 167
>gi|156393358|ref|XP_001636295.1| predicted protein [Nematostella vectensis]
gi|156223397|gb|EDO44232.1| predicted protein [Nematostella vectensis]
Length = 176
Score = 172 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIKPQ 62
V GLGN H RH++G ++ + ++ KK+ ++ Q+ IL+KP+
Sbjct: 1 VVGLGN--HSMPNTRHSVGMAVVNHLAEKLGAEWSFSKKYQGYLAMTQIPQQNIILLKPK 58
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
MN++G+S++ V++ Y + + +++HD+LD G +K GG GH G+KS +
Sbjct: 59 LLMNVNGRSIVRVVSAYNI-QPSHVILVHDELDKALGKFSIKYGGSAGGHKGVKSSINQL 117
Query: 123 GK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
RLR+GIGRP D + + +VL +FS E+ L +++ ++++
Sbjct: 118 MSLEMVRLRVGIGRPVDRSQVSDYVLQDFSESEKPILTCVLEECSQTI 165
>gi|281340092|gb|EFB15676.1| hypothetical protein PANDA_004444 [Ailuropoda melanoleuca]
Length = 198
Score = 171 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++VAGLGNPG RH++G + ++ A+++ L + +L++P
Sbjct: 27 WLVAGLGNPGLP--GTRHSVGLAVLGQLAQRLGA--------ADLALASLGDAQLVLLRP 76
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
MN +G+S+ + L E ++HD+LD G L LK GG GH G++S
Sbjct: 77 WRLMNNNGRSVARAAELFGL-TAEEVYLVHDELDKPLGKLALKLGGSSRGHKGVRSCITC 135
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
+ RLR+GIGRP + HVLG FS+ E+ L P+++
Sbjct: 136 LNSSAMPRLRVGIGRPTHPDTVQAHVLGYFSAAEKELLPPLLERATD 182
>gi|189485711|ref|YP_001956652.1| peptidyl-tRNA hydrolase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287670|dbj|BAG14191.1| peptidyl-tRNA hydrolase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 194
Score = 171 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG +Y RHN+GF+ +D I AE+S R +KP
Sbjct: 8 KLFIGLGNPGQKYENTRHNLGFIILDEIVDLKHLKFKMWNDMAEVSFYGEPDFRVWFLKP 67
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMNLSG ++ YK+ E V +DD + FG R+K G GHNG+ SI E
Sbjct: 68 VTFMNLSGIAVSSFAKCYKIKP-EEIFVFYDDFLIPFGEYRVKMSGSSGGHNGMSSIIES 126
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
N R+++GIG P VL F+ ++ + I +
Sbjct: 127 LHSDNLPRMKLGIGPLPKFIPAADFVLSKFAREDKDRISLIKKTAVSLFDEVYVSGLDKT 186
Query: 181 LNHIVSVR 188
++ + +++
Sbjct: 187 VSKLANIK 194
>gi|219685941|ref|ZP_03540739.1| aminoacyl-tRNA hydrolase [Borrelia garinii Far04]
gi|219672515|gb|EED29556.1| aminoacyl-tRNA hydrolase [Borrelia garinii Far04]
Length = 188
Score = 170 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 4/186 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN+GF +D+I S + +KK E SE ++ R IL+KP
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIISKNGLFLKRKK-KYEYSELRMISGRVILVKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG + + + + ++N LV+ D++DL G RLK GG + HNGLKSIS
Sbjct: 62 LTYMNLSGSLFPSIFSDFYMC-IKNLLVVLDNVDLPLGKCRLKERGGASTHNGLKSISSA 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G NY RL IG+G I VL F E L + D ++ L ++K +
Sbjct: 121 LGSSNYSRLYIGVGSNVMR-DIKSFVLSRFCKDEIDRLEKLYDFLSDELVDISKANFKNK 179
Query: 181 LNHIVS 186
+ I S
Sbjct: 180 VQKINS 185
>gi|88608638|ref|YP_506197.1| peptidyl-tRNA hydrolase [Neorickettsia sennetsu str. Miyayama]
gi|119390967|sp|Q2GE99|PTH_NEOSM RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|88600807|gb|ABD46275.1| peptidyl-tRNA hydrolase [Neorickettsia sennetsu str. Miyayama]
Length = 194
Score = 170 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 78/185 (42%), Positives = 106/185 (57%), Gaps = 6/185 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG Y + RHN+GFM ID + FP + KF +S G++ L KP
Sbjct: 7 FVLCGLGNPGLRYAQTRHNLGFMLIDYVRYTFSFPEFLPKFSGLLSSGRVSSFLLYLFKP 66
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMN SG+ L++++NFYK+ LEN +V HDD+DLDF +++K GGG GHNGLKS+
Sbjct: 67 VAFMNNSGRPLVQLVNFYKV-ELENVIVFHDDIDLDFAKVKIKRGGGSGGHNGLKSLDFN 125
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR---EDV 178
G++Y R R G+GR HVL F++ E L + I +LPLL
Sbjct: 126 LGRDYWRFRFGVGR--GVGDPAEHVLSRFTALELERLNKLFGFIGTNLPLLLSDIATRKE 183
Query: 179 SFLNH 183
FLN
Sbjct: 184 KFLNE 188
>gi|257471247|ref|ZP_05635246.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|311085932|gb|ADP66014.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086503|gb|ADP66584.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087085|gb|ADP67165.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 182
Score = 170 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 57/169 (33%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIK 60
++ GL NP EY RHN+G + + + +KKF + ++ L+
Sbjct: 5 KMIVGLSNPKKEYHSTRHNVGSWYLYSLAESYLRNFKNEKKFFGFTTSLNIESNYIRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P FMN++GQS+ ++ +FY + NL L++HDDL+L G +LK G GHNGL+ I
Sbjct: 65 PNIFMNINGQSVFKMASFYNI-NLSEILIVHDDLELQPGISKLKYSYGHNGHNGLRDIVN 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
KN + R RIGIGRP + I VL N + E+ + I +
Sbjct: 124 TFNKNINFYRFRIGIGRPINRDQIASFVLSNPTKKEKILIQKSILHAIE 172
>gi|1127571|gb|AAB06184.1| peptidyl-tRNA hydrolase [Chlamydia muridarum]
Length = 194
Score = 170 bits (433), Expect = 7e-41, Method: Composition-based stats.
Identities = 59/177 (33%), Positives = 99/177 (55%), Gaps = 6/177 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIK 60
+V G+GNPG +Y RHNIGF+ +D + S + + + + +LIK
Sbjct: 3 KLVVGIGNPGRQYVWTRHNIGFLFLDMLASRFSGAFREAPRLFSSFMKVETSCGVIVLIK 62
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T++NL+G+++L F+ + ++E L++ DD++ +FG++R + G GHNGLK+ ++
Sbjct: 63 PSTYVNLTGKAVLAAKRFFGV-SVEGILIVADDINREFGSIRFRQDCGAGGHNGLKNTTQ 121
Query: 121 KCGKN-YKRLRIGIGRP--PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL-PLLA 173
N Y +LR+G+GRP P++ +VL NFS ER L + + P LA
Sbjct: 122 VLQSNHYWQLRLGVGRPSNPESEGGADYVLSNFSFNERKGLNGFFEKGIEEISPWLA 178
>gi|301761926|ref|XP_002916374.1| PREDICTED: probable peptidyl-tRNA hydrolase-like [Ailuropoda
melanoleuca]
Length = 195
Score = 170 bits (433), Expect = 7e-41, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++VAGLGNPG RH++G + ++ A+++ L + +L++P
Sbjct: 15 WLVAGLGNPGLP--GTRHSVGLAVLGQLAQRLGA--------ADLALASLGDAQLVLLRP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
MN +G+S+ + L E ++HD+LD G L LK GG GH G++S
Sbjct: 65 WRLMNNNGRSVARAAELFGL-TAEEVYLVHDELDKPLGKLALKLGGSSRGHKGVRSCITC 123
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
+ RLR+GIGRP + HVLG FS+ E+ L P+++
Sbjct: 124 LNSSAMPRLRVGIGRPTHPDTVQAHVLGYFSAAEKELLPPLLERATD 170
>gi|317011632|gb|ADU85379.1| peptidyl-tRNA hydrolase [Helicobacter pylori SouthAfrica7]
Length = 186
Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + + K +A + + IL+
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDLLVGELDLSFIFSPKHNAYLRIYK----DFILL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L V NFYK + L++HDDLDL G ++ K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSVKNFYK---PKELLIVHDDLDLPLGVVKFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
C +Y RLR+GI + +I HVL F + E ++ +L + D +
Sbjct: 114 LLCSNSYYRLRVGISK---GFNITEHVLSKFHNNEEPLKNAAFEHAKNALKFFIESHDFN 170
Query: 180 FLNHIVSVRK 189
+ +++K
Sbjct: 171 ATQNRFTLKK 180
>gi|311087637|gb|ADP67716.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 182
Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats.
Identities = 57/169 (33%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIK 60
++ GL NP EY RHN+G + + + +KKF + ++ L+
Sbjct: 5 KMIVGLSNPKKEYHSTRHNVGSWYLYSLAESYLRNFKNEKKFFGFTTSLNIESNYIRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P FMN++GQS+ ++ +FY + NL L++HDDL+L G +LK G GHNGL+ I
Sbjct: 65 PNIFMNINGQSVFKMASFYNI-NLSEILIVHDDLELQPGISKLKYSYGHNGHNGLRDIVN 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
KN + R RIGIGRP + I VL N + E+ + I +
Sbjct: 124 TFNKNINFYRFRIGIGRPINRDQIASFVLSNPTKKEKILIQTSILHAIE 172
>gi|219684911|ref|ZP_03539852.1| peptidyl-tRNA hydrolase [Borrelia garinii PBr]
gi|219671649|gb|EED28705.1| peptidyl-tRNA hydrolase [Borrelia garinii PBr]
Length = 188
Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 100/187 (53%), Gaps = 6/187 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN+GF +D+I S + +KK E SE ++ R IL+KP
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIISKNGLFLKRKK-KYEYSELRMISGRVILVKP 61
Query: 62 QTFMNLSGQSLLEVM-NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
T+MNLSG + +FY ++N LV+ D++DL G RLK GG + HNGLKSIS
Sbjct: 62 LTYMNLSGSLFPSIFSDFYMC--IKNLLVVLDNVDLPLGKCRLKERGGASTHNGLKSISS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY RL IG+G I VL F E L + D ++ L +++ +
Sbjct: 120 ALGSSNYSRLYIGVGSNVMR-DIKSFVLSRFCKDEIDRLEKLYDFLSDELVDISEANFKN 178
Query: 180 FLNHIVS 186
+ I S
Sbjct: 179 KVQKINS 185
>gi|13507960|ref|NP_109909.1| peptidyl-tRNA hydrolase [Mycoplasma pneumoniae M129]
gi|2499986|sp|P78034|PTH_MYCPN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|1674312|gb|AAB96258.1| peptidyl-tRNA hydrolase [Mycoplasma pneumoniae M129]
gi|301633118|gb|ADK86672.1| aminoacyl-tRNA hydrolase [Mycoplasma pneumoniae FH]
Length = 188
Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 4/186 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+V GLGN G +Y E RHN GF IDR+ S + ++ E L + +L KP
Sbjct: 6 LVVGLGNLGKQYAETRHNAGFKVIDRLLSLYHVQLEERNNLGEF--ILLRKHKVVLAKPN 63
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MN SG+ + + + + +V++D+L GT+RLK G HNG+KS+
Sbjct: 64 TYMNHSGKFVKWACQNWNIKP-DKVMVVYDELAFPLGTVRLKMQGSANNHNGIKSVIAHL 122
Query: 123 GKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
+ RLR GI + + V+ F+ ER L + +L + L
Sbjct: 123 NTEHFNRLRFGIKSDNTSNILHEVVMSEFTPAERNLLETALTKAIEALKGYIDGVTMLKL 182
Query: 182 NHIVSV 187
+ +
Sbjct: 183 MEVFNA 188
>gi|76797994|ref|ZP_00780253.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae 18RS21]
gi|76586674|gb|EAO63173.1| peptidyl-tRNA hydrolase [Streptococcus agalactiae 18RS21]
Length = 167
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 51/168 (30%), Positives = 90/168 (53%), Gaps = 4/168 (2%)
Query: 24 MCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLP 82
M +DRI + K F AEI ++G + IKP TFMN SG ++ ++ +Y +
Sbjct: 1 MAVDRIVKDLDVNFTEDKNFKAEIGSDFINGEKIYFIKPTTFMNNSGIAVKALLTYYNI- 59
Query: 83 NLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-KNYKRLRIGIGRPPDTAH 141
++++ ++I+DDLD++ G +R + G GHNG+KSI G + + R+++GIGRP
Sbjct: 60 SIKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAHLGTQEFDRIKVGIGRPNGRMT 119
Query: 142 IIRHVLGNFSSPERYFLLPIIDNIARSLP-LLAKREDVSFLNHIVSVR 188
+I HVLG F + +L +D + ++ L + + ++
Sbjct: 120 VINHVLGKFDKNDEIMILNTLDKVDNAVNYYLQTNDFQKTMQKYNGLK 167
>gi|148825325|ref|YP_001290078.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittEE]
gi|148715485|gb|ABQ97695.1| peptidyl-tRNA hydrolase [Haemophilus influenzae PittEE]
Length = 163
Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 56/162 (34%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 30 HSFHFFPAW-KKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYL 88
+ KF + + ++G L+ P TFMNLSG+++ + +FY++ E L
Sbjct: 2 ARRFNVSLNPESKFFGKTARTLVNGKEVRLLVPTTFMNLSGKAVGALASFYRIKP-EEIL 60
Query: 89 VIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN--YKRLRIGIGRPPDTAHIIRHV 146
VIHD+LDL GT +LK GGG GHNGLK I + G N + RLRIGIG P + +V
Sbjct: 61 VIHDELDLPAGTAKLKQGGGHGGHNGLKDIVAQLGNNNNFYRLRIGIGHPGHRDLVAGYV 120
Query: 147 LGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVSVR 188
L S +R L ++D + ++ K + N + S +
Sbjct: 121 LNKPSPADRDALEKVLDEATDCVEIIFKDGMIKATNRLNSFK 162
>gi|323465803|gb|ADX69490.1| Peptidyl-tRNA hydrolase [Lactobacillus helveticus H10]
Length = 162
Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
M +D + K KF ++ Q++G IL++P+T+MN SG+S+ ++ NF+K+
Sbjct: 1 MTMDHYLNEKGLSLDKDKFEGHWTKQQINGEDVILLEPKTYMNESGRSVSQIANFFKVAP 60
Query: 84 LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN-YKRLRIGIGRPPDTAHI 142
E+ L+I DD+D+ G +R++ G GHNG+KSI G + RL+IGI P +T +
Sbjct: 61 -EDVLIIQDDMDMPIGKIRIRANGKSGGHNGIKSIIRDLGTEKFNRLKIGIRHPKNT-TV 118
Query: 143 IRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF-LNHIV 185
+ VL F+ ++ + D + + D + +N
Sbjct: 119 VSWVLTPFNDEQQKLMDDAFDTSVKIIDDFIAGRDSQYLMNKYN 162
>gi|296190876|ref|XP_002743381.1| PREDICTED: probable peptidyl-tRNA hydrolase-like [Callithrix
jacchus]
Length = 228
Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 7/170 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRT--IL 58
++VAGLGNPG RH++G + ++ +W + H +L
Sbjct: 45 WMVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALALLGDAQLVL 102
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN +G+S+ + L E ++HD+LD G L LK GG GHNG++S
Sbjct: 103 LRPRRLMNANGRSVARAAELFGL-TAEEVYLVHDELDKPLGKLALKLGGSARGHNGVRSC 161
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
N RLR+GIGRP + HVLG+FS E+ L ++D A
Sbjct: 162 INCLNSNAMPRLRVGIGRPTHPEAVQAHVLGSFSPAEQELLPLLLDRAAD 211
>gi|30519902|ref|NP_848710.1| probable peptidyl-tRNA hydrolase [Mus musculus]
gi|81913689|sp|Q8BW00|PTH_MOUSE RecName: Full=Probable peptidyl-tRNA hydrolase; Short=PTH
gi|26344690|dbj|BAC35994.1| unnamed protein product [Mus musculus]
gi|68085781|gb|AAH98218.1| Peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) [Mus musculus]
gi|123858283|emb|CAM16629.1| peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) [Mus musculus]
gi|148676630|gb|EDL08577.1| peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) [Mus musculus]
Length = 204
Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW---KKKFHAEISEGQLDGLRTIL 58
++VAGLGN G RH++G + +I + A+++ L + +L
Sbjct: 21 WLVAGLGNHG--MPGTRHSVGMAVLGQIARRLGVAENWTRDSRCAADLALAPLGDAQLVL 78
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN++G+S+ + L E ++HD+LD G L LK GG GHNG++S
Sbjct: 79 LRPRRLMNVNGRSVARAAELFGL-TAEEIYLVHDELDKPLGKLALKLGGSARGHNGVRSC 137
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
N RL +GIGRP + HVLG FS E+ L P++D
Sbjct: 138 ISCLNSNAMPRLLVGIGRPTHPNMVENHVLGCFSPEEQELLSPLMDQATD 187
>gi|15616809|ref|NP_240021.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681562|ref|YP_002467948.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
gi|11133756|sp|P57287|PTH_BUCAI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|254783857|sp|B8D8Y9|PTH_BUCA5 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|25319087|pir||C84952 aminoacyl-tRNA hydrolase (EC 3.1.1.29) [imported] - Buchnera sp.
(strain APS)
gi|10038872|dbj|BAB12907.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219624405|gb|ACL30560.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
Length = 177
Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIKP 61
++ GL NP EY RHN+G + + + +KKF + ++ L+ P
Sbjct: 1 MIVGLSNPKKEYHSTRHNVGSWYLYSLAESYLRNFKNEKKFFGFTTSLNIESNYIRLLIP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMN++GQS+ ++ +FY + NL L++HDDL+L G +LK G GHNGL+ I
Sbjct: 61 NIFMNINGQSVFKMASFYNI-NLSEILIVHDDLELQPGISKLKYSYGHNGHNGLRDIVNT 119
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
KN + R RIGIGRP + I VL N + E+ + I +
Sbjct: 120 FNKNINFYRFRIGIGRPINRDQIASFVLSNPTKKEKILIQKSILHAIE 167
>gi|15829252|ref|NP_326612.1| peptidyl-tRNA hydrolase [Mycoplasma pulmonis UAB CTIP]
gi|21263857|sp|Q98PE2|PTH_MYCPU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|14090196|emb|CAC13954.1| PEPTIDYL-TRNA HYDROLASE (PTH) [Mycoplasma pulmonis]
Length = 186
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 9/192 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG EY + RHN+GFM ID+I K+KF+ + G I+ K
Sbjct: 1 MKLIVGLGNPGDEYDKTRHNLGFMVIDKIAEKLNVKLDKEKFNGIFYK----GENYIISK 56
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MN SG + ++ NF+ + ++ ++DL G +K G G G++SI E
Sbjct: 57 PLTYMNNSGNFVYDIKNFFDIEIDNIIIIYD-EIDLKVGQASIKIKGSANGQRGMQSIIE 115
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
K +N KR++IG+ RP + ++L E+ +ID +A L + +
Sbjct: 116 KLKTENIKRIKIGVSRPL-YEPVSSYILKKIPENEKETFEKVIDELADKLLTYIFNDFKT 174
Query: 180 FLN--HIVSVRK 189
F+N + + +K
Sbjct: 175 FINVSKLKNSKK 186
>gi|114777714|ref|ZP_01452674.1| peptidyl-tRNA hydrolase [Mariprofundus ferrooxydans PV-1]
gi|114551930|gb|EAU54464.1| peptidyl-tRNA hydrolase [Mariprofundus ferrooxydans PV-1]
Length = 185
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 65/180 (36%), Positives = 93/180 (51%), Gaps = 4/180 (2%)
Query: 8 GNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKPQTFMN 66
GNPG +Y E RHNIGF +D + +FHAE + R +L+KPQTFMN
Sbjct: 2 GNPGSKYEETRHNIGFRFLDLLAKSEGLRFDAAPRFHAETAVWNRPEGRVLLVKPQTFMN 61
Query: 67 LSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC-GKN 125
SG+S+ + +Y++ + +V++DDLDL G LRLK GGG GHNGL+S+++ N
Sbjct: 62 NSGESVAALARYYQV-ETDQIVVVYDDLDLPAGKLRLKHGGGHGGHNGLRSLNQHLPDNN 120
Query: 126 YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIV 185
Y R + GIGRP I VLG +R + + + + + N I
Sbjct: 121 YIRAKAGIGRPAH-GDITPWVLGRADEGDRADEARVFAALLNEIDTILSGQLPQAANRIH 179
>gi|219682120|ref|YP_002468504.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219621853|gb|ACL30009.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
Length = 177
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIKP 61
++ GL NP EY RHN+G + + + +KKF + ++ L+ P
Sbjct: 1 MIVGLSNPKKEYHSTRHNVGSWYLYSLAESYLRNFKNEKKFFGFTTSLNIESNYIRLLIP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMN++GQS+ ++ +FY + NL L++HDDL+L G +LK G GHNGL+ I
Sbjct: 61 NIFMNINGQSVFKMASFYNI-NLSEILIVHDDLELQPGISKLKYSYGHNGHNGLRDIVNT 119
Query: 122 CGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
KN + R RIGIGRP + I VL N + E+ + I +
Sbjct: 120 FNKNINFYRFRIGIGRPINRDQIASFVLSNPTEKEKILIQKSILHAIE 167
>gi|71892123|ref|YP_277855.1| peptidyl-tRNA hydrolase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
gi|71796229|gb|AAZ40980.1| peptidyl-tRNA hydrolase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 197
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 5/191 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQLDGLRTILIK 60
++AGLGN Y RHN G + + + + K + +L L+
Sbjct: 4 KLIAGLGNSETSYFNTRHNFGARYVKSLATRYKVILSKNTILCGYVGRLKLATNIVHLLI 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGG-DAGHNGLKSIS 119
P + MN +G S+ + ++FY+L E L+ HDDLDL G +R+K G + H G+K +
Sbjct: 64 PDSNMNNNGLSISKCVDFYQLCPQE-ILIAHDDLDLPPGVMRIKLGKNINNSHRGVKDVI 122
Query: 120 EKCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
K ++ RLRIGIG P + + +I VL + E+Y + +I+ + ++
Sbjct: 123 VKLHNKYDFYRLRIGIGHPGNKSKVIGFVLNKPTIYEKYKINRVINEAILHTESIVNKKF 182
Query: 178 VSFLNHIVSVR 188
+ +N + S
Sbjct: 183 IEVMNQLHSYN 193
>gi|108803739|ref|YP_643676.1| peptidyl-tRNA hydrolase [Rubrobacter xylanophilus DSM 9941]
gi|119390999|sp|Q1AXL4|PTH_RUBXD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|108764982|gb|ABG03864.1| peptidyl-tRNA hydrolase [Rubrobacter xylanophilus DSM 9941]
Length = 172
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 65/181 (35%), Positives = 97/181 (53%), Gaps = 12/181 (6%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFM 65
GLGNPG Y RHN G M +D + H + AE +E ++G +L+KP TFM
Sbjct: 2 GLGNPGRRYALTRHNAGHMVLDELFRRHGGRWRRA-RRAEAAEVSVEGREAVLLKPATFM 60
Query: 66 NLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN 125
N SG++L E+ +V+HDDLDL GT+R+K GGG GHNGL+S+ + G
Sbjct: 61 NESGEALSGYR-------AEDLIVVHDDLDLPAGTVRVKVGGGAGGHNGLRSVISRVGNG 113
Query: 126 YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIV 185
+ R+R+GIGRPP+ A + +VLG R + A ++ + + + +N
Sbjct: 114 FVRVRVGIGRPPEGADVTGYVLGRMDRAAREAIP----RAADAVEAVLEEGPEAAMNRFN 169
Query: 186 S 186
+
Sbjct: 170 A 170
>gi|111115621|ref|YP_710239.1| peptidyl-tRNA hydrolase [Borrelia afzelii PKo]
gi|216263488|ref|ZP_03435483.1| peptidyl-tRNA hydrolase [Borrelia afzelii ACA-1]
gi|119390915|sp|Q0SM65|PTH_BORAP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|110890895|gb|ABH02063.1| peptidyl-tRNA hydrolase [Borrelia afzelii PKo]
gi|215980332|gb|EEC21153.1| peptidyl-tRNA hydrolase [Borrelia afzelii ACA-1]
Length = 188
Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 99/187 (52%), Gaps = 6/187 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN+GF +D+I S + +KK E SE ++ R IL+KP
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIVSKNGLFLKRKK-KYEYSELRVISRRVILVKP 61
Query: 62 QTFMNLSGQSLLEVM-NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
T+MNLSG + +FY ++N LV+ D++DL G RLK GG + HNGLKSIS
Sbjct: 62 LTYMNLSGSLFPSIFSDFYMC--IKNLLVVLDNVDLPLGKCRLKERGGMSTHNGLKSISS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY RL IG+G I VL F E L + D ++ L +++
Sbjct: 120 VLGSSNYSRLYIGVGSNVMR-DIKSFVLSRFCKDEIDRLEKLYDFLSDELIDISESNFKD 178
Query: 180 FLNHIVS 186
+ I S
Sbjct: 179 KVQKINS 185
>gi|260950521|ref|XP_002619557.1| hypothetical protein CLUG_00716 [Clavispora lusitaniae ATCC 42720]
gi|238847129|gb|EEQ36593.1| hypothetical protein CLUG_00716 [Clavispora lusitaniae ATCC 42720]
Length = 228
Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 12/186 (6%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAE-----ISEGQLDGLR-T 56
+V G+GNP Y RH++G +D++ ++ K A S+ Q L
Sbjct: 32 LVVGIGNPTPTYNGTRHSVGHYILDKMIEEYWTNFGSFKPMALNSSFVYSKSQTAELSNV 91
Query: 57 ILIKP-QTFMNLSGQSLLEVMNFYKLPNLEN---YLVIHDDLDLDFGTLRLKT-GGGDAG 111
+L K ++MNLSG + ++ Y NL + +V+HD+L + G ++++ G
Sbjct: 92 LLAKTVSSYMNLSGTPVSKLWQKYHQQNLNSRPAMVVLHDELQVPLGKIQIRRRNTSARG 151
Query: 112 HNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL-LPIIDNIARSLP 170
HNGL+SI + G NY +L IGIG+PP + VL FS E L + +A+++
Sbjct: 152 HNGLRSIDQAIGSNYIKLAIGIGKPPQKTSVSDFVLAKFSPVELETLAEQTMPKVAKAMA 211
Query: 171 LLAKRE 176
AK +
Sbjct: 212 EFAKGQ 217
>gi|315453576|ref|YP_004073846.1| peptidyl-tRNA hydrolase [Helicobacter felis ATCC 49179]
gi|315132628|emb|CBY83256.1| peptidyl-tRNA hydrolase [Helicobacter felis ATCC 49179]
Length = 191
Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 68/188 (36%), Positives = 94/188 (50%), Gaps = 8/188 (4%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M +V GLGNP Y RHN+GF +D + K +A L L+K
Sbjct: 1 MRLVVGLGNPTPTYAHTRHNVGFDVLDLLAHRFGVAF---KGNAHYLYATLPQHACYLLK 57
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P T+MNLSGQ+L + + N++ LV+HDDLDL G LR K GGG+ GHNGLKSI E
Sbjct: 58 PMTYMNLSGQALSMFLRHH--ENIDTLLVVHDDLDLPLGALRFKQGGGNGGHNGLKSIEE 115
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
K + +L+IGIGR A HVL F + E + +L + +D +
Sbjct: 116 HYQKTFFKLKIGIGR---GADARSHVLQCFEATEETHKNEVFKQALEALSFYLEHDDFAR 172
Query: 181 LNHIVSVR 188
+ ++
Sbjct: 173 MQSRFTLN 180
>gi|148284982|ref|YP_001249072.1| peptidyl-tRNA hydrolase [Orientia tsutsugamushi str. Boryong]
gi|146740421|emb|CAM80898.1| peptidyl-tRNA hydrolase [Orientia tsutsugamushi str. Boryong]
Length = 186
Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 112/186 (60%), Gaps = 3/186 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
+V GLGNPG EY +RHN G++ +++I ++ K K+ ++I++ L G + I IKP
Sbjct: 2 LVVGLGNPGKEYANSRHNAGYIVLEQIAFYNNLSFSKSTKYKSDIAKILLLGQKIIFIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ + +FYKL N + ++ D+DL G ++LK GGG GHNGLKSIS
Sbjct: 62 LTYMNLSGTAVCLIKDFYKLQNYDIIVIHD-DIDLPLGIVKLKVGGGSGGHNGLKSISSA 120
Query: 122 CGKNYKRLRIGIGRP-PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R++IGIGRP + + +VL +F E L I IA ++ L +++ F
Sbjct: 121 IGDSYLRIKIGIGRPISEHLSVASYVLSDFLVEELTVLYSIARKIAENVELAVQKQFSEF 180
Query: 181 LNHIVS 186
+ I +
Sbjct: 181 MFKIKN 186
>gi|146421069|ref|XP_001486486.1| hypothetical protein PGUG_02157 [Meyerozyma guilliermondii ATCC
6260]
gi|146389901|gb|EDK38059.1| hypothetical protein PGUG_02157 [Meyerozyma guilliermondii ATCC
6260]
Length = 209
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 14/188 (7%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHS-----FHFFPAWKKKFHAEISEGQLDGLRTI 57
+V +GNP +Y + RHN+G I+ +H + A K F EIS DG +
Sbjct: 28 LVVSIGNPEPQYKDTRHNVGHWIINELHRNNVPIEYGPWADDKTFGGEIS-TSSDGNVVL 86
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLK-TGGGDAGHNGLK 116
++MN G+ + ++ Y + LV+HD+L D G L+L+ G GHNGLK
Sbjct: 87 ARSIGSYMNTQGKPVSKITQRYG--KDKTLLVVHDELQKDLGKLQLRGPGTSARGHNGLK 144
Query: 117 SISEKCGKNYKRLRIGIGRP-PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
SI G Y +L +GIGRP + +VL F++ ER L +++ + +L +
Sbjct: 145 SIDSAMGNKYTKLSVGIGRPNKGQKEVSDYVLSKFTTSERAELEKVLEKAS----VLVSQ 200
Query: 176 EDVSFLNH 183
+NH
Sbjct: 201 VINDSINH 208
>gi|116332056|ref|YP_801774.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116125745|gb|ABJ77016.1| Aminoacyl-tRNA hydrolase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 187
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NR NIGF +D I + KK + I G +G +L+K
Sbjct: 1 MKLIVGLGNPGDRYNNNRSNIGFKILDVIANNINVEIKTKKKKSLIGRGDFEGEEVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTF +LSG+S+L + +F K+ + LVI +D L G + + G + H G+KSI +
Sbjct: 61 PQTFSDLSGESVLYIASFLKI-QVGEILVIQEDWTLPLGRIVVDKGTQETDHPGVKSIVQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLG-NFSSPERYFLLPIIDNIARSLPLLAKREDV 178
N+ R+RIGI L +F E L+ II++ ++ ++ +
Sbjct: 120 SLRSPNFIRIRIGIQNDEFNLKTRDSFLKEDFEPMENLSLIQIINDAEAAIRSISLGDID 179
Query: 179 SFLNHIV 185
+
Sbjct: 180 DVIEKYH 186
>gi|85057847|ref|YP_456763.1| peptidyl-tRNA hydrolase [Aster yellows witches'-broom phytoplasma
AYWB]
gi|119390912|sp|Q2NIQ9|PTH_AYWBP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|84789952|gb|ABC65684.1| peptidyl-tRNA hydrolase [Aster yellows witches'-broom phytoplasma
AYWB]
Length = 188
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 62/160 (38%), Positives = 101/160 (63%), Gaps = 3/160 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG ++ RHNIGF+ +D S + + K+ +A I + + +T+LIK
Sbjct: 1 MKLIVGLGNPGKKFLNTRHNIGFVVVDSFLSQNKYQTLKEDTNAHIYQINFNNHQTLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+ + +++N Y++ +EN LVI DD+ LD G L+LK GG GHNGL++I +
Sbjct: 61 PQTYMNLSGEVVKKIINKYRIK-IENILVIVDDIYLDEGKLKLKMQGGHGGHNGLRNIID 119
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL 159
C K +KRL+IG+ + +++L ++ + +L
Sbjct: 120 RLCTKQFKRLKIGVSLD-SCMPLDQYLLTPVNASSQKNIL 158
>gi|51599038|ref|YP_073226.1| peptidyl-tRNA hydrolase [Borrelia garinii PBi]
gi|68052917|sp|Q65ZY7|PTH_BORGA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|51573609|gb|AAU07634.1| peptidyl-tRNA hydrolase [Borrelia garinii PBi]
Length = 185
Score = 167 bits (425), Expect = 5e-40, Method: Composition-based stats.
Identities = 70/185 (37%), Positives = 100/185 (54%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG E+ RHN+GF +DRI S + +KK E SE ++ R IL+KP
Sbjct: 1 MILGLGNPGLEFSLTRHNVGFSLLDRIISKNGLFLKRKK-KYEYSEMRMISGRVILVKPL 59
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG + + + + ++N LV+ D++DL G RLK GG + HNGLKSIS
Sbjct: 60 TYMNLSGSLFPSIFSDFYMC-IKNLLVVLDNVDLPLGKCRLKERGGASTHNGLKSISSIL 118
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G NY RL IG+G I VL F E L + D ++ L +++ + +
Sbjct: 119 GSSNYSRLYIGVGSNVMR-DIKSFVLSRFCKDEIDRLEKLYDFLSDELIDISEANFKNKV 177
Query: 182 NHIVS 186
I S
Sbjct: 178 QKINS 182
>gi|183219659|ref|YP_001837655.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189909796|ref|YP_001961351.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167774472|gb|ABZ92773.1| Aminoacyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167778081|gb|ABZ96379.1| Peptidyl-tRNA hydrolase (PTH) [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 187
Score = 167 bits (425), Expect = 5e-40, Method: Composition-based stats.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NR NIGF +D I + KK + I G +G +L+K
Sbjct: 1 MKLIVGLGNPGDRYNNNRSNIGFKILDVIANNIGIEIKTKKKKSLIGRGDFEGDEVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTF LSG+S+L + +F K+ +++ +VIH+DL+L+ G + + GG + + G+ SIS
Sbjct: 61 PQTFSELSGESVLYIASFLKI-QVKDIVVIHEDLELELGQIVVTKGGENDSNPGVNSISV 119
Query: 121 KC-GKNYKRLRIGI-GRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
N+ R+RIG+ + + +F E L+ II++ ++ ++ +
Sbjct: 120 SLRSPNFIRIRIGVLNSSFNPKKREDFLREDFEPLENLSLIQIINDAEAAIRSISMGDID 179
Query: 179 SFLNHIV 185
+
Sbjct: 180 EVIQKYH 186
>gi|15595132|ref|NP_212921.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi B31]
gi|195942002|ref|ZP_03087384.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 80a]
gi|218249419|ref|YP_002375286.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi ZS7]
gi|221217611|ref|ZP_03589080.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 72a]
gi|223889314|ref|ZP_03623901.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 64b]
gi|224533459|ref|ZP_03674052.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi CA-11.2a]
gi|225549395|ref|ZP_03770367.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 94a]
gi|1346894|sp|P47714|PTH_BORBU RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|226723246|sp|B7J0N3|PTH_BORBZ RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|476008|gb|AAC41525.1| Peptidyl-tRNA hydrolase-like protein [Borrelia burgdorferi]
gi|2688714|gb|AAC67122.1| peptidyl-tRNA hydrolase (pth) [Borrelia burgdorferi B31]
gi|218164607|gb|ACK74668.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi ZS7]
gi|221192557|gb|EEE18775.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 72a]
gi|223885235|gb|EEF56338.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 64b]
gi|224513421|gb|EEF83779.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi CA-11.2a]
gi|225370023|gb|EEG99464.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 94a]
Length = 188
Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 100/186 (53%), Gaps = 4/186 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN+GF +D+I S + +KK E SE ++ R IL+KP
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIVSKNGLFLKRKK-KYEYSELKMISGRVILVKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG + + + + ++N LV+ D++DL G RLK GG + HNGL+SIS
Sbjct: 62 LTYMNLSGSLFPSIFSDFYMC-IKNLLVVLDNVDLPLGKCRLKERGGVSTHNGLRSISSV 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G NY RL IG+G I VL F E L + D ++ L +++ +
Sbjct: 121 LGSSNYSRLYIGVGSNLMR-DIKSFVLSRFCKDEMDRLEKLYDFLSDELIDISEANFKNK 179
Query: 181 LNHIVS 186
+ I S
Sbjct: 180 VQKINS 185
>gi|116515063|ref|YP_802692.1| hypothetical protein BCc_123 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|122285541|sp|Q057V0|PTH_BUCCC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|116256917|gb|ABJ90599.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. Cc (Cinara
cedri)]
Length = 192
Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 62/164 (37%), Positives = 92/164 (56%), Gaps = 4/164 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILIK 60
++ GLGN ++Y + RHN+GF I+ + SF+ +KKKF +S L+ + L+K
Sbjct: 5 KMIVGLGNSVYKYNQTRHNVGFWYINMLSSFYKTSLKFKKKFSGYVSSFFLNNNKIFLLK 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P FMNL+G S+ + +FYK+ L LV+ D+LDL G L++K G G GHNG+KSI
Sbjct: 65 PDLFMNLNGYSVFALSSFYKIK-LSEILVVRDELDLSPGILKVKYGIGHNGHNGVKSIIN 123
Query: 121 KCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
K + +L IGIGRP ++ VL S + + I
Sbjct: 124 TFEKKKPFIQLCIGIGRPEFKKNVSNFVLECPSKIDTINIKKAI 167
>gi|224534131|ref|ZP_03674711.1| aminoacyl-tRNA hydrolase [Borrelia spielmanii A14S]
gi|224514556|gb|EEF84870.1| aminoacyl-tRNA hydrolase [Borrelia spielmanii A14S]
Length = 188
Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 99/187 (52%), Gaps = 6/187 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN+GF +D+I S + K+K E SE ++ R +L+KP
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIVSKNG-LCLKRKKKYEYSELRMISRRVVLVKP 61
Query: 62 QTFMNLSGQSLLEVM-NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
T+MNLSG + +FY ++N LV+ D++DL G RLK G + HNGLKSIS
Sbjct: 62 LTYMNLSGSLFPSIFSDFYMC--VKNLLVVLDNVDLPLGKCRLKERGSMSTHNGLKSISS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY RL IG+G I VL F E L + D ++ + +++ +
Sbjct: 120 VLGSSNYSRLYIGVGNNVMR-DIKSFVLSRFCKDEIDRLEKLYDFLSDEVIDISEANFKN 178
Query: 180 FLNHIVS 186
+ I S
Sbjct: 179 KVQKINS 185
>gi|308799159|ref|XP_003074360.1| Peptidyl-tRNA hydrolase-like (ISS) [Ostreococcus tauri]
gi|116000531|emb|CAL50211.1| Peptidyl-tRNA hydrolase-like (ISS) [Ostreococcus tauri]
Length = 242
Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 11/190 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ V GLGNPG ++ +HN+GF ID + S KK A + R +L+KP
Sbjct: 52 WAVFGLGNPGKKFDGTKHNVGFDVIDVLASALGVEVTAKKHAALVGTWASGDARAVLVKP 111
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QTFMNLSG+S+ +M +K+P E++ D G + H
Sbjct: 112 QTFMNLSGKSVRAIMRAHKIPKNESW------RDTAEGQRDARR---AQRHPEYHRRRHG 162
Query: 122 CGKNYKRLRIGIGRP-PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL-PLLAKREDVS 179
G+++ R+++GIGRP D + +VL F + + + + ++ +L +
Sbjct: 163 RGQDFARVKVGIGRPKSDDVPVYEYVLSKFDVDDADKMRDAVADAVEAVRAVLTENRFED 222
Query: 180 FLNHIVSVRK 189
+ + + K
Sbjct: 223 VMMRVNTNAK 232
>gi|30410817|ref|NP_660538.2| peptidyl-tRNA hydrolase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 182
Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NP +Y + RHN+G I + + +KKF + L+
Sbjct: 5 KMIVGLSNPKKKYHKTRHNVGSWYIYSLAKNYLSILKEEKKFFGFTGCLNIKSNFIRLLI 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P FMN++G S+ + +FY + +L L++HDDLDL G ++ K G +GHNGL+ I +
Sbjct: 65 PDIFMNINGFSVHRMASFYNI-SLNQILIVHDDLDLAPGIIKYKYSYGHSGHNGLRHIIK 123
Query: 121 KCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
+ N+ RLRIGIGRP + I VL E + I +
Sbjct: 124 EFNTKVNFYRLRIGIGRPKNKNEISSFVLSIPDFKEMKLIKKSISYAIK 172
>gi|12044935|ref|NP_072745.1| peptidyl-tRNA hydrolase [Mycoplasma genitalium G37]
gi|255660106|ref|ZP_05405515.1| peptidyl-tRNA hydrolase [Mycoplasma genitalium G37]
gi|1346896|sp|P47329|PTH_MYCGE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|3844670|gb|AAC71301.1| peptidyl-tRNA hydrolase [Mycoplasma genitalium G37]
gi|166078836|gb|ABY79454.1| peptidyl-tRNA hydrolase [synthetic Mycoplasma genitalium JCVI-1.0]
Length = 189
Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 4/179 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGN G +Y + RHN GFM +DR+ S K + + IL KP
Sbjct: 5 KLIVGLGNLGKKYEKTRHNAGFMVLDRLASLFHLNFDKTNKLGDY--LFIKEKAAILAKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG + + + +++P L N +++HD++ D G +RLK G HNG+KS+
Sbjct: 63 ATFMNNSGLFVKWLQDHFQIP-LANIMIVHDEIAFDLGVIRLKMQGSANNHNGIKSVIRH 121
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
+ + RLR GI + + V+ F + E L I L + E++
Sbjct: 122 LDTEQFNRLRFGIKSQNTSNILHEQVMSEFQNSELTKLEVAITKSVELLKRYIEGEELQ 180
>gi|224073398|ref|XP_002194186.1| PREDICTED: similar to peptidyl-tRNA hydrolase 1 homolog
[Taeniopygia guttata]
Length = 632
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 7/157 (4%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWK--KKFHAEISEGQLDGLRTILIK 60
VAGLGN G RH++G +D++ W+ ++ A+++ GL +L+K
Sbjct: 21 VAGLGNYGLR--GTRHSVGMEVLDQLARQLAVAEGWRVDRRCCADVALATAHGLELVLLK 78
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P+ FMNL+G S+ Y L ++ ++HDDLD G + +K GG GHNG++S
Sbjct: 79 PRRFMNLNGLSVASAAEIYSLGP-KDIYLVHDDLDKALGKVAIKLGGSARGHNGVQSCIS 137
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERY 156
RLRIGIGRP + +VL F++ ER
Sbjct: 138 ALHSNEMTRLRIGIGRPEGDVTVPSYVLSPFTAGERE 174
>gi|293607608|ref|ZP_06689942.1| aminoacyl-tRNA hydrolase [Achromobacter piechaudii ATCC 43553]
gi|292814041|gb|EFF73188.1| aminoacyl-tRNA hydrolase [Achromobacter piechaudii ATCC 43553]
Length = 176
Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 5/147 (3%)
Query: 44 AEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRL 103
+++ L +L+KP T+MN SGQ++ + FYKL E LV+HD+LDL G ++L
Sbjct: 26 GMVAKSHLGADNVLLLKPITYMNKSGQAVGALARFYKLAP-EQVLVLHDELDLLPGQVKL 84
Query: 104 KTGGGDAGHNGLKSISEKCG-KNYKRLRIGIGRP---PDTAHIIRHVLGNFSSPERYFLL 159
K GGG AGHNGLK I G N+ RLRIGIG P + VL E+ +
Sbjct: 85 KQGGGHAGHNGLKDIQAVLGSPNFWRLRIGIGHPRTLGLAQQVADFVLHPPRREEQKEIE 144
Query: 160 PIIDNIARSLPLLAKREDVSFLNHIVS 186
+ID +P + + + S
Sbjct: 145 AVIDRCRAVVPAMLAGDFALATRQLHS 171
>gi|30350188|gb|AAP31496.1| putative peptidyl-tRNA hydrolase [Western X phytoplasma]
Length = 205
Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 56/161 (34%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH--FFPAWKKKFHAEISEGQLDGLRTIL 58
M ++ GLGNPG + HNIGFM I+ + KK+ + +S QL+ +L
Sbjct: 19 MKLIVGLGNPGKMFELTPHNIGFMLINYLEKEWKKNILTTKKELSSIVSHLQLEQETILL 78
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++PQT+MN+SG+++ ++M Y +P ++ LV+ DD++L+ G +LK GG GHNGL++I
Sbjct: 79 VQPQTYMNISGKAIKQLMLKYNIPK-DDVLVLVDDINLEPGAFKLKYKGGHGGHNGLRNI 137
Query: 119 SEKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+ K++KRLRIG+G + ++VL ++ + +
Sbjct: 138 IDMLHSKDFKRLRIGVGLD-SRIPLEQYVLNRLNTQTQQQI 177
>gi|225551687|ref|ZP_03772631.1| peptidyl-tRNA hydrolase [Borrelia sp. SV1]
gi|225371714|gb|EEH01140.1| peptidyl-tRNA hydrolase [Borrelia sp. SV1]
gi|312147913|gb|ADQ30572.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi JD1]
Length = 188
Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 6/187 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN+GF +D+I S + +KK E SE ++ R IL+KP
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIVSKNGLFLKRKK-KYEYSELKMISGRVILVKP 61
Query: 62 QTFMNLSGQSLLEVM-NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
T+MNLSG + +FY ++N LV+ D++DL G RLK GG + HNGL+SIS
Sbjct: 62 LTYMNLSGSLFPSIFSDFYMC--IKNLLVVLDNVDLPLGKCRLKERGGVSTHNGLRSISS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY RL IG+G I VL F E L + D ++ L +++ +
Sbjct: 120 VLGSSNYSRLYIGVGSNL-MCDIKSFVLSRFCKDEMDRLEKLYDFLSDELIDISEANFKN 178
Query: 180 FLNHIVS 186
+ I S
Sbjct: 179 KVQKINS 185
>gi|224531784|ref|ZP_03672416.1| peptidyl-tRNA hydrolase [Borrelia valaisiana VS116]
gi|224511249|gb|EEF81655.1| peptidyl-tRNA hydrolase [Borrelia valaisiana VS116]
Length = 188
Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 100/187 (53%), Gaps = 6/187 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN+GF +D+I S + +KK E SE ++ R IL+KP
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIVSKNGLFLKRKK-KYEYSELKMISRRVILVKP 61
Query: 62 QTFMNLSGQSLLEVM-NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
T+MNLSG + +FY ++N LV+ D++DL G RLK GG + HNGLKSIS
Sbjct: 62 LTYMNLSGSIFPLIFSDFYMC--IKNLLVVLDNVDLPLGKCRLKERGGVSTHNGLKSISS 119
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G NY RL IG+G I VL F E L + D ++ L +++ +
Sbjct: 120 VLGSSNYSRLYIGVGSN-VMCDIKSFVLSKFCKDEIDRLEKLYDFLSDELLDISETNFKN 178
Query: 180 FLNHIVS 186
+ I S
Sbjct: 179 KVQKINS 185
>gi|224532914|ref|ZP_03673525.1| aminoacyl-tRNA hydrolase [Borrelia burgdorferi WI91-23]
gi|226321218|ref|ZP_03796752.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 29805]
gi|224512152|gb|EEF82542.1| aminoacyl-tRNA hydrolase [Borrelia burgdorferi WI91-23]
gi|226233372|gb|EEH32119.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 29805]
gi|312149257|gb|ADQ29328.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi N40]
Length = 188
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 100/186 (53%), Gaps = 4/186 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN+GF +D+I S + +KK E SE ++ R IL+KP
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIVSKNGLFLKRKK-KYEYSELKMISGRVILVKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG + + + + ++N LV+ D++DL G RLK GG + HNGL+SIS
Sbjct: 62 LTYMNLSGSLFPSIFSDFYMC-IKNLLVVLDNVDLPLGKCRLKERGGVSTHNGLRSISSV 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G NY RL IG+G I VL F E L + D ++ L +++ +
Sbjct: 121 LGSSNYSRLYIGVGSNLMR-DINSFVLSRFCKDEMDRLEKLYDFLSDELIDISEANFKNK 179
Query: 181 LNHIVS 186
+ I S
Sbjct: 180 VQKINS 185
>gi|25091010|sp|Q8K9V3|PTH_BUCAP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|21623087|gb|AAM67749.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 177
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 4/168 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GL NP +Y + RHN+G I + + +KKF + L+ P
Sbjct: 1 MIVGLSNPKKKYHKTRHNVGSWYIYSLAKNYLSILKEEKKFFGFTGCLNIKSNFIRLLIP 60
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMN++G S+ + +FY + +L L++HDDLDL G ++ K G +GHNGL+ I ++
Sbjct: 61 DIFMNINGFSVHRMASFYNI-SLNQILIVHDDLDLAPGIIKYKYSYGHSGHNGLRHIIKE 119
Query: 122 CGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
N+ RLRIGIGRP + I VL E + I +
Sbjct: 120 FNTKVNFYRLRIGIGRPKNKNEISSFVLSIPDFKEMKLIKKSISYAIK 167
>gi|330443833|ref|YP_004376819.1| peptidyl-tRNA hydrolase [Chlamydophila pecorum E58]
gi|328806943|gb|AEB41116.1| Peptidyl-tRNA hydrolase [Chlamydophila pecorum E58]
Length = 186
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 95/169 (56%), Gaps = 7/169 (4%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK--KKFHAEISEGQLD--GLRTIL 58
+V +GNPG Y +RHN+GF+ + + PA+K K + +++ +
Sbjct: 5 LVVAIGNPGKAYNFSRHNVGFLLAEWLVRELGGPAFKPFSKCVSLMTKVDSPSTSESLVF 64
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
IKP+T++NLSG+++L F+ L + E+ LV+ DD++ DFG +RL+ G GH G+KSI
Sbjct: 65 IKPETYVNLSGKAVLAAKKFFSL-SPEHILVLADDVNRDFGDVRLRYQAGSGGHKGIKSI 123
Query: 119 SEKCGKN-YKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNI 165
G N + +LR+G+GRP + A + VLG+FS E+ L
Sbjct: 124 VASLGSNLFWQLRLGVGRPDNRAVGLSDFVLGDFSCEEKEQLPACFAQA 172
>gi|330836937|ref|YP_004411578.1| peptidyl-tRNA hydrolase [Spirochaeta coccoides DSM 17374]
gi|329748840|gb|AEC02196.1| peptidyl-tRNA hydrolase [Spirochaeta coccoides DSM 17374]
Length = 192
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 5/164 (3%)
Query: 3 IVA-GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFH-AEISEGQL-DGLRTILI 59
++A GLGNPG EY RHN+GF + + +F P K+ E +G G R +L+
Sbjct: 1 MIACGLGNPGTEYEHTRHNVGFDVVATVAAFLHVPMRKRFCRPYERGDGFFSSGTRFVLM 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+P TFMN SG+ L V +LP + +V+ D +DL G++R++ GG DAGH GLKSI
Sbjct: 61 RPLTFMNGSGRILKYVQRLLRLPGT-DLIVVCDQMDLPCGSIRIRKGGKDAGHRGLKSII 119
Query: 120 EKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
+ G +++ RL IG+GRP ++ HVL + E I
Sbjct: 120 QHYGSEDFIRLYIGVGRPSAGTSVVEHVLSRPAPDEVPAFQKGI 163
>gi|297685405|ref|XP_002820280.1| PREDICTED: LOW QUALITY PROTEIN: probable peptidyl-tRNA
hydrolase-like [Pongo abelii]
Length = 235
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFH--AEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W + H A+++ L + +L
Sbjct: 45 WMVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 102
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGD-------AG 111
++P+ MN +G+S+ + L E ++HD+LD G L GG + G
Sbjct: 103 LRPRRLMNANGRSVARAAELFGL-TAEEVYLVHDELDKPLGRXTLPPGGTNCPSHIPXRG 161
Query: 112 HNGLKSISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
HNG++S N RLR+GIGRP + HVLG FS E+ L ++D
Sbjct: 162 HNGVRSCISCLNSNAMPRLRVGIGRPTHPEAVQAHVLGCFSPAEQELLPLLLDRATD 218
>gi|116327329|ref|YP_797049.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116120073|gb|ABJ78116.1| Aminoacyl-tRNA hydrolase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 187
Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NR NIGF +D I + KK + I G +G +L+K
Sbjct: 1 MKLIVGLGNPGDRYNNNRSNIGFKILDVIANNINVEIKTKKKKSLIGRGDFEGEEVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTF +LSG+S+L + +F K+ + LVI +D L G + + G + H G+KSI +
Sbjct: 61 PQTFSDLSGESVLYIASFLKI-QVGEILVIQEDWTLTLGRIVVDKGTQETDHPGVKSIVQ 119
Query: 121 KC-GKNYKRLRIGIGRPPDTAHIIRHVLG-NFSSPERYFLLPIIDNIARSLPLLAKREDV 178
N+ R+RIGI L +F E L+ II++ ++ ++ +
Sbjct: 120 SLRSPNFIRIRIGIQNDEFNLKTRDSFLKEDFEPMENLSLIQIINDAEAAIRSISLGDID 179
Query: 179 SFLNHIV 185
+
Sbjct: 180 DVIEKYH 186
>gi|295698663|ref|YP_003603318.1| peptidyl-tRNA hydrolase [Candidatus Riesia pediculicola USDA]
gi|291157441|gb|ADD79886.1| peptidyl-tRNA hydrolase [Candidatus Riesia pediculicola USDA]
Length = 199
Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIK 60
++AGL NP Y RHN+G + + + KKF +I + + L+
Sbjct: 8 KLIAGLSNP-KRYSGTRHNVGELFVKFFSKKFGNKLVQNKKFFGKIDKLSFLNSKVFLLV 66
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
+MN +G ++ NFY + + LV+HD+LDL G+LR+K GG GH G+ S+ E
Sbjct: 67 SDLYMNNNGIAISHFCNFYHICP-KKILVVHDELDLPPGSLRIKIGGSYNGHKGVLSVEE 125
Query: 121 KCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE--D 177
K G + RLRIGIGRP + VL +R + I+ + L +++
Sbjct: 126 KLGSSEFYRLRIGIGRPYKNQKVSEFVLNFPDRLDRELISLAINRSSSYLYSAIQKDICF 185
Query: 178 VSFLNHIVSVR 188
N+I S+
Sbjct: 186 SKIQNYINSIN 196
>gi|216264799|ref|ZP_03436791.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 156a]
gi|215981272|gb|EEC22079.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 156a]
Length = 185
Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 100/185 (54%), Gaps = 4/185 (2%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG E+ RHN+GF +D+I S + +KK E SE ++ R IL+KP
Sbjct: 1 MILGLGNPGLEFSLTRHNVGFSLLDKIVSKNGLFLKRKK-KYEYSELKMISGRVILVKPL 59
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
T+MNLSG + + + + ++N LV+ D++DL G RLK GG + HNGL+SIS
Sbjct: 60 TYMNLSGSLFPSIFSDFYMC-IKNLLVVLDNVDLPLGKCRLKERGGVSTHNGLRSISSVL 118
Query: 123 G-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFL 181
G NY RL IG+G I VL F E L + D ++ L +++ + +
Sbjct: 119 GSSNYSRLYIGVGSNLMR-DIKSFVLSRFCKDEMDRLEKLYDFLSDELIDISEANFKNKV 177
Query: 182 NHIVS 186
I S
Sbjct: 178 QKINS 182
>gi|226321252|ref|ZP_03796780.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi Bol26]
gi|226233284|gb|EEH32035.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi Bol26]
Length = 188
Score = 165 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 100/186 (53%), Gaps = 4/186 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN+GF +D+I S + +KK E SE ++ R IL+KP
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIVSKNGLFLKRKK-KYEYSELKMISGRVILVKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG + + + + ++N LV+ D++DL G RLK GG + HNGL+SIS
Sbjct: 62 LTYMNLSGSLFPLIFSDFYMC-IKNLLVVLDNVDLPLGKCRLKERGGVSTHNGLRSISSV 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G NY RL IG+G I VL F E L + D ++ L +++ +
Sbjct: 121 LGSSNYSRLYIGVGSNLMR-DIKSFVLSRFCKDEMDRLEKLYDFLSDELIDISEANFKNK 179
Query: 181 LNHIVS 186
+ I S
Sbjct: 180 VQKINS 185
>gi|24216519|ref|NP_714000.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str.
56601]
gi|45656330|ref|YP_000416.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|24197830|gb|AAN51018.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str.
56601]
gi|45599564|gb|AAS69053.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
Length = 187
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 3/187 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG Y NR NIGF +D I + KK + I G +G +L+K
Sbjct: 1 MKLIVGLGNPGDRYNNNRSNIGFKILDVIANNINVEIKTKKKKSLIGRGDFEGEEVVLLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQTF +LSG+S+L + +F K+ + LVI +D L G + + G + H G+KSI +
Sbjct: 61 PQTFSDLSGESVLYIASFLKI-QVGEILVIQEDWTLPLGRIVVDKGTQETDHPGVKSIVQ 119
Query: 121 KC-GKNYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDV 178
N+ R+RIGI + + + +F E L+ II++ ++ ++ +
Sbjct: 120 SLRSPNFIRIRIGIQNDGFNLKNRESFLKEDFEPMENLSLIQIINDAEAAIRSISLGDID 179
Query: 179 SFLNHIV 185
+
Sbjct: 180 DVIEKYH 186
>gi|90657669|gb|ABD96967.1| hypothetical protein [Cleome spinosa]
Length = 257
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 28/209 (13%)
Query: 2 FIVAGLGNPGHEYCENRHNI----------GFMCIDRIHSFHFFPAWKK--KFHAEISEG 49
+++ GLGNPG+++ RHN+ GF S + +++ KF A S G
Sbjct: 50 WLIVGLGNPGNKFHGTRHNVRNNRPLLLNSGF------ASSTCWVLYQQCLKF-AAFSTG 102
Query: 50 QLDGLRTILIKPQTFMNLSGQSLLEVMN--FYKLPNLENYLV-----IHDDLDLDFGTLR 102
++ + +L KPQT+MN SG ++ F + +LV I+D++ L G L+
Sbjct: 103 AIEEVPVLLAKPQTYMNFSGWISRCTLSSAFETHFAGKPHLVPHCSLIYDEMSLPNGVLK 162
Query: 103 LKTGGGDAGHNGLKSISEKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLP 160
L GG HNGLKS+ +++ RL IGIG+PP + +L FS ER +
Sbjct: 163 LIPKGGYGHHNGLKSVIGNLNGRRHFPRLCIGIGKPPGMMDLKAFLLQKFSPVERKQMDE 222
Query: 161 IIDNIARSLPLLAKREDVSFLNHIVSVRK 189
++ A ++ L ++ V+K
Sbjct: 223 GLEQGAEAVKTLVLNGFNEGISRFNLVQK 251
>gi|319760477|ref|YP_004124415.1| peptidyl-tRNA hydrolase [Candidatus Blochmannia vafer str. BVAF]
gi|318039191|gb|ADV33741.1| peptidyl-tRNA hydrolase [Candidatus Blochmannia vafer str. BVAF]
Length = 194
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 6/189 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-FHAEISEGQL-DGLRTILI 59
++ G+GN G EY RH+IG I + + K I + + L+
Sbjct: 4 KLIVGIGNIGAEYINTRHSIGHRYIHMLTKKYKVNLKLDKILSGFIGSLTICKSMTVQLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGG-DAGHNGLKSI 118
P +++N SG ++ + M Y+L +L+ LV+HD+LDL G +R+K G H G+++I
Sbjct: 64 IPNSYINESGLAVYKYMKLYRL-DLKELLVVHDELDLSPGMIRIKLGNKLYESHRGIQNI 122
Query: 119 SEKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
+ RLRIGIGRP + I+ VL + S E+ + I++ + + +
Sbjct: 123 INNLSNQYGFYRLRIGIGRPKNKNEIVNFVLSSPSIHEKKKIDFIMNQAILCIEDIIFDK 182
Query: 177 DVSFLNHIV 185
V +N +
Sbjct: 183 FVKVMNQLH 191
>gi|197294654|ref|YP_001799195.1| peptidyl-tRNA hydrolase [Candidatus Phytoplasma australiense]
gi|226723258|sp|B1VAH1|PTH_PHYAS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|171853981|emb|CAM11944.1| Peptidyl-tRNA hydrolase [Candidatus Phytoplasma australiense]
Length = 189
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 58/189 (30%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
I+ GLGNPG E+ HNIGF+ ++ + + + + QL+ + L+KP
Sbjct: 3 KIIIGLGNPGKEFQNTYHNIGFLALESFLKNNKHQMIPNSYQGHLYQIQLNNCISFLVKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q +MN SG+ + ++++ Y++ +E+ LVI DD+ L G ++L+ GG AGHNGL++I E
Sbjct: 63 QMYMNSSGKVVKKILDAYQIK-IEDILVILDDIYLPEGKIKLRPQGGHAGHNGLRNIIEC 121
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR-EDVS 179
C N +KRL+IG+G + + +++L F+ ++ +L ID I + + +
Sbjct: 122 CNTNKFKRLKIGVGYDSN-IPLNQYLLTPFNLHQKKQILQNIDKIHEIMSKFIQGISFNN 180
Query: 180 FLNHIVSVR 188
+N ++
Sbjct: 181 LMNQYNVIK 189
>gi|254442208|ref|ZP_05055684.1| peptidyl-tRNA hydrolase superfamily [Verrucomicrobiae bacterium
DG1235]
gi|198256516|gb|EDY80824.1| peptidyl-tRNA hydrolase superfamily [Verrucomicrobiae bacterium
DG1235]
Length = 175
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 5/169 (2%)
Query: 25 CIDRIHSFHFFPAWKK--KFHAEISEGQLDG-LRTILIKPQTFMNLSGQSLLEVMNFYKL 81
++ + + H AWKK K EI+ + IL+KP TFMN SG + ++ +FYK+
Sbjct: 1 MVEALAAKHGADAWKKDRKLKGEIATLSSSKLGKQILVKPTTFMNESGVCVQKLCSFYKI 60
Query: 82 PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTA- 140
P E +V++D+++L G ++L G GHNGL I + + R+R+GIG PD
Sbjct: 61 PP-EEVIVVYDEINLSVGEVKLSMSGSAGGHNGLADILGRIAPRFARIRVGIGAKPDKEV 119
Query: 141 HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVSVRK 189
+ +VLGNFS+ + + +D S+ LL +N I RK
Sbjct: 120 PLADYVLGNFSNDDASVVAASMDRYVESIELLLTLGPELAMNQINRKRK 168
>gi|315585884|gb|ADU40265.1| aminoacyl-tRNA hydrolase [Helicobacter pylori 35A]
Length = 160
Score = 164 bits (417), Expect = 5e-39, Method: Composition-based stats.
Identities = 67/170 (39%), Positives = 93/170 (54%), Gaps = 11/170 (6%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M ++ GLGNP Y RHN GF +D + S + K +A + + I +
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLISELDLSFTFSSKHNACLCVYK----DFIFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MNLSG+S+L NFYK + L++HDDLDLD G +R K GGG+ GHNGLKSI
Sbjct: 57 KPQTYMNLSGESVLSAKNFYK---TKELLIVHDDLDLDLGVVRFKNGGGNGGHNGLKSID 113
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
C +Y RLR+GI + ++ HVL F E + ++ +L
Sbjct: 114 LLCSNSYYRLRVGISK---GMGVVEHVLSKFHKNEEPLKNAVFEHAKNAL 160
>gi|262340830|ref|YP_003283685.1| aminoacyl-tRNA hydrolase [Blattabacterium sp. (Blattella germanica)
str. Bge]
gi|262272167|gb|ACY40075.1| aminoacyl-tRNA hydrolase [Blattabacterium sp. (Blattella germanica)
str. Bge]
Length = 188
Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats.
Identities = 67/182 (36%), Positives = 97/182 (53%), Gaps = 4/182 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG+ Y + RHN+GF+ +D+I HFF KKK ISE + +KP
Sbjct: 4 FLIIGLGNPGYLYKKTRHNLGFLILDQIAKKHFFSFSKKKL-GFISEFNFEKKLLFFLKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T++N SG S+ M K+ L N L+I DD+ L+FG RL+ G GHNGLKS+ ++
Sbjct: 63 STYVNHSGLSVKYWMKKEKIL-LRNILIISDDISLNFGNFRLRGKGRSGGHNGLKSVEKE 121
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + Y RLR GI + I +VL N+ + E L +D + +
Sbjct: 122 IGTSHYARLRFGIKNHLEK-RIDSYVLENWKNEEIDCLYSKLDVGIKIIFSFVTNGLQKT 180
Query: 181 LN 182
+N
Sbjct: 181 MN 182
>gi|119953562|ref|YP_945772.1| peptidyl-tRNA hydrolase [Borrelia turicatae 91E135]
gi|254783854|sp|A1R0L0|PTH_BORT9 RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119862333|gb|AAX18101.1| peptidyl-tRNA hydrolase [Borrelia turicatae 91E135]
Length = 188
Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats.
Identities = 61/188 (32%), Positives = 98/188 (52%), Gaps = 7/188 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG + RHN+GF ID++ H K K + E S+ + R +LIKP
Sbjct: 3 LLIVGLGNPGSNFFHTRHNVGFGLIDKLVVKHGLSLKKVK-NYEYSDFNFENKRIVLIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG V + + + N L++ D++DL G +L+ GG + HNGL+SIS
Sbjct: 62 LTYMNLSGNIFPSVFARFYMK-MTNLLIVVDNVDLPLGKCKLRKVGGTSTHNGLRSISGS 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y RL IG+G + + + VL FS E + + + ++ + ++ +F
Sbjct: 121 LGSTKYSRLYIGVGNN-NESSLRDFVLAKFSDSELKRIKNVFNFLS---EEILSIDECNF 176
Query: 181 LNHIVSVR 188
N I ++
Sbjct: 177 ENKIATIN 184
>gi|189184106|ref|YP_001937891.1| peptidyl-tRNA hydrolase [Orientia tsutsugamushi str. Ikeda]
gi|189180877|dbj|BAG40657.1| peptidyl-tRNA hydrolase [Orientia tsutsugamushi str. Ikeda]
Length = 186
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 111/186 (59%), Gaps = 3/186 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKP 61
+V GLGNPG EY +RHN G++ +++I ++ K K+ ++I++ L G + I IKP
Sbjct: 2 LVVGLGNPGKEYANSRHNAGYIVLEQIALYNDLSFSKSTKYKSDIAKILLLGKKIIFIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG ++ + +FYKL N + ++ D+DL G ++LK GGG GHNGLKSIS
Sbjct: 62 LTYMNLSGTAVCLIKDFYKLQNYDIIVIHD-DIDLPLGIVKLKVGGGSGGHNGLKSISSA 120
Query: 122 CGKNYKRLRIGIGRP-PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G +Y R++IGIGRP + + +VL +F E L I IA + L +++ F
Sbjct: 121 IGDSYLRIKIGIGRPLSEHLSVASYVLSDFLVTELTVLYSIARKIAENFELAVQKQFSEF 180
Query: 181 LNHIVS 186
+ I +
Sbjct: 181 MFKIKN 186
>gi|221091196|ref|XP_002156830.1| PREDICTED: similar to predicted protein, partial [Hydra
magnipapillata]
Length = 712
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 62/181 (34%), Positives = 94/181 (51%), Gaps = 18/181 (9%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG--LRTILIKP 61
+ GLGN + Y +RH+IG D+I S + WK F + QL I++K
Sbjct: 518 IVGLGN--YIYPNSRHSIGMSICDKIASQYNLS-WKYSFDYKAYTTQLSNITNDIIMLKS 574
Query: 62 QTFMNLSGQSLLEVMN---------FY---KLPNLENYLVIHDDLDLDFGTLRLKTGGGD 109
+ MN++G+S+ ++ F+ K +EN +V+HDDLD G L LKT G
Sbjct: 575 KYPMNMNGKSVKAIVKGLEVECFFSFFILVKGLEVENIIVVHDDLDRPLGKLSLKTCGSA 634
Query: 110 AGHNGLKSISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
GHNG+KSI G + ++RLRIGIGRP + + R+VL +F E+ L + +
Sbjct: 635 GGHNGVKSIISCLGTDKFRRLRIGIGRPINPNEVTRYVLADFDVSEKTNLEMVHKHALEI 694
Query: 169 L 169
+
Sbjct: 695 I 695
>gi|255634128|gb|ACU17427.1| unknown [Glycine max]
Length = 179
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 3/130 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG++Y RHN+GF ID + + A I G + + +L KP
Sbjct: 50 WLIIGLGNPGNKYHGTRHNVGFEIIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLAKP 109
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
QT+MN SG+S+ + +Y++P L + L++ D+ L G LRL+ GG HNGLK++
Sbjct: 110 QTYMNFSGESVGPLAAYYQVP-LRHILLVFDETSLPNGVLRLQPNGGHGHHNGLKNVMGH 168
Query: 122 CG--KNYKRL 129
+ RL
Sbjct: 169 LDGCSAFPRL 178
>gi|59711370|ref|YP_204146.1| peptidyl-tRNA hydrolase [Vibrio fischeri ES114]
gi|59479471|gb|AAW85258.1| peptidyl-tRNA hydrolase [Vibrio fischeri ES114]
Length = 156
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 53/154 (34%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 37 AWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDL 96
+ KF Q +G L+ P TFMNLSG+++ + FY++ E LV HD+LDL
Sbjct: 2 REEAKFFGLTGRIQSNGDDLRLLIPTTFMNLSGKAIAAMAKFYQIKP-EEILVAHDELDL 60
Query: 97 DFGTLRLKTGGGDAGHNGLKSISEKC--GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPE 154
G + K GGG GHNGL+ K K + RLRIGIG P + VLG + E
Sbjct: 61 PPGVAKFKKGGGHGGHNGLRDTISKLANTKEFYRLRIGIGHPGHKDKVAGFVLGKAPTKE 120
Query: 155 RYFLLPIIDNIARSLPLLAKREDVSFLNHIVSVR 188
+ + +D R L +L K N + + +
Sbjct: 121 QELIDAAVDESTRCLDILLKDGLSKAQNRLHTFK 154
>gi|157165704|ref|YP_001466457.1| lipoprotein [Campylobacter concisus 13826]
Length = 159
Score = 162 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 64/166 (38%), Positives = 90/166 (54%), Gaps = 11/166 (6%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
M ID + +F KF E+ + +G IL+KP TFMNLSGQS+ V +FYK
Sbjct: 1 MLIDLLKDSNFKDVSSAKFQGEV--FKFNG--IILLKPTTFMNLSGQSVKAVRDFYK--- 53
Query: 84 LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHII 143
+ +VIHDDLDL FG ++ K GG GHNG+KSI G +Y+R+R+GIG
Sbjct: 54 PDRIIVIHDDLDLSFGAVKFKKGGSSGGHNGIKSIDNLIGNDYERVRVGIGH---EGDAK 110
Query: 144 RHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVSVRK 189
VLG FS E+ L I+ ++ L K + ++ +V+K
Sbjct: 111 NFVLGEFSDEEKKALDEILAYTKNAVCELLKSDINE-ISQKFTVKK 155
>gi|218462408|ref|ZP_03502499.1| peptidyl-tRNA hydrolase [Rhizobium etli Kim 5]
Length = 101
Score = 162 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 57/102 (55%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M I+AGLGNPG +Y NRHNIGFM +D IH H F W KKF EI+EG+L G + +LIK
Sbjct: 1 MLIIAGLGNPGAKYAGNRHNIGFMAVDAIHRRHSFSPWSKKFRGEIAEGELAGEKVLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLR 102
PQT+MNLSG+++ E M FYKL + + I+D+LDL G R
Sbjct: 61 PQTYMNLSGEAVGEAMRFYKL-QPADLVAIYDELDLPAGKAR 101
>gi|254468539|ref|ZP_05081945.1| peptidyl-tRNA hydrolase [beta proteobacterium KB13]
gi|207087349|gb|EDZ64632.1| peptidyl-tRNA hydrolase [beta proteobacterium KB13]
Length = 191
Score = 162 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ GLGNPG EY RHN+GF I + + + D L+ P
Sbjct: 5 KLFIGLGNPGSEYEATRHNVGFWFNHLIANNIKQTLDENSKFLGFYKKIADLENIHLLNP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
TFMN SG S+ +++NFYK E L+IHD+LDL G +RLK GGG GHNGLKSI
Sbjct: 65 ATFMNESGLSVAKIVNFYKFKPHE-ILIIHDELDLMPGDIRLKNGGGHGGHNGLKSIIAN 123
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G N + RLRIGIG P D + +VL E + I ++L + E
Sbjct: 124 IGTNAFWRLRIGIGHPGDKNKVKSYVLNRPQKIEEDQINDAILKGYQNLSYMIHGEFEKA 183
Query: 181 LNHIVS 186
+ ++ +
Sbjct: 184 ILNLHT 189
>gi|308233681|ref|ZP_07664418.1| peptidyl-tRNA hydrolase [Atopobium vaginae DSM 15829]
gi|328943607|ref|ZP_08241072.1| aminoacyl-tRNA hydrolase [Atopobium vaginae DSM 15829]
gi|327491576|gb|EGF23350.1| aminoacyl-tRNA hydrolase [Atopobium vaginae DSM 15829]
Length = 201
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 3/166 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG-QLDGLRTILIKP 61
+ GLGNPG EY HNIGF D + WK + ++ + DG + KP
Sbjct: 18 CIIGLGNPGAEYARTPHNIGFEACDALARNLHASYWKSQAGCLVAAAPRGDGSMVYIAKP 77
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q +MN SG + +++ KL + LV+HDD D+D G ++LK GGG GHNGL+S+++K
Sbjct: 78 QGYMNTSGGPVSKLLRELKLTT-RDMLVLHDDCDMDLGNVKLKWGGGLNGHNGLRSLAQK 136
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
++ RL+ GIGRP + +VL ++ +D +
Sbjct: 137 LQTSDFARLKCGIGRPSGRMSLATYVLTPVRGKQQELFDFAVDAAS 182
>gi|39938638|ref|NP_950404.1| peptidyl-tRNA hydrolase [Onion yellows phytoplasma OY-M]
gi|68052967|sp|Q6YR64|PTH_ONYPE RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|39721747|dbj|BAD04237.1| peptidyl-tRNA hydrolase [Onion yellows phytoplasma OY-M]
Length = 188
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 57/134 (42%), Positives = 89/134 (66%), Gaps = 2/134 (1%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M ++ GLGNPG ++ RHN+GF +D S + + K+ I + + +++LIK
Sbjct: 1 MKLIVGLGNPGTKFVNTRHNVGFAVVDSFLSQNKYQILKEDKTDHIYQINFNHHQSLLIK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
PQT+MNLSG+ + +++N Y++ +EN LVI DD+ LD G L+LK GG GHNGL++I +
Sbjct: 61 PQTYMNLSGEVVKKIINKYRIK-IENILVIVDDIYLDEGKLKLKMQGGHGGHNGLRNIID 119
Query: 121 KCG-KNYKRLRIGI 133
+ G K +KRL+IG+
Sbjct: 120 RLGTKQFKRLKIGV 133
>gi|196229513|ref|ZP_03128378.1| Aminoacyl-tRNA hydrolase [Chthoniobacter flavus Ellin428]
gi|196226745|gb|EDY21250.1| Aminoacyl-tRNA hydrolase [Chthoniobacter flavus Ellin428]
Length = 157
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 9/164 (5%)
Query: 24 MCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLP 82
M +DR+ + +K + AE++ +L KP T+MNLSGQ++ + FYK+
Sbjct: 1 MLLDRLATRERVDFRVEKSWQAEVAR----SGDLLLCKPLTYMNLSGQAVRPLSQFYKIE 56
Query: 83 NLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK-NYKRLRIGIGRPPDTAH 141
LVI DD+ L G LR +T G GHNGL S+ E G RLRIGIG
Sbjct: 57 P-SQVLVILDDMALPLGKLRFRTNGSAGGHNGLASVIEHFGTPAVPRLRIGIG--GAERG 113
Query: 142 IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIV 185
++ HVLG F+ E+ + +D ++ R + +N
Sbjct: 114 VVDHVLGRFALEEQPAVEQSLDRALEAIDCARTRGLEAAMNAYN 157
>gi|23015981|ref|ZP_00055743.1| COG0193: Peptidyl-tRNA hydrolase [Magnetospirillum magnetotacticum
MS-1]
Length = 189
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 58/140 (41%), Positives = 95/140 (67%), Gaps = 1/140 (0%)
Query: 46 ISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKT 105
++EG ++G + I +KPQT+MNLSGQS+ F K+P +++ +V+HD+LD+ G L++K
Sbjct: 1 MAEGVIEGRKVIALKPQTYMNLSGQSVAAASRFLKVP-VDDIVVLHDELDIAPGRLKVKR 59
Query: 106 GGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
GGG GHNGLKSI G+NY+R+R+GIG P D + +VL +F+ + +L+P++D +
Sbjct: 60 GGGAGGHNGLKSIDSHLGQNYRRVRMGIGHPGDRDLVSGYVLHDFAKADEAWLIPVLDAV 119
Query: 166 ARSLPLLAKREDVSFLNHIV 185
A + P+L +D F+ +
Sbjct: 120 ADTFPMLVSGDDTGFMTRVA 139
>gi|88856043|ref|ZP_01130704.1| peptidyl-tRNA hydrolase [marine actinobacterium PHSC20C1]
gi|88814611|gb|EAR24472.1| peptidyl-tRNA hydrolase [marine actinobacterium PHSC20C1]
Length = 167
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 63/168 (37%), Positives = 96/168 (57%), Gaps = 4/168 (2%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQL--DGLRTILIKPQTFMNLSGQSLLEVMNFYKL 81
M + + K +A ++EG+ DG + IL KP +FMNLSG + +M FYK+
Sbjct: 1 MVLAHLADETSATFKNHKANAAVAEGRSFGDGPKLILAKPNSFMNLSGGPVSALMRFYKI 60
Query: 82 PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK-NYKRLRIGIGRPPDTA 140
P +E +V+HD+LD+DF T++LKTGGG GHNG++ I+ G ++ R+R+GIGRPP
Sbjct: 61 P-VERLIVVHDELDIDFDTVKLKTGGGHGGHNGIRDIAAAVGSPDFMRVRVGIGRPPGRQ 119
Query: 141 HIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVSVR 188
VL +FS ER L ++ + + ++ LLA + S R
Sbjct: 120 PAADFVLRDFSGEERSVLPNLLTDASDAVVLLASEGLEAAQQRFHSPR 167
>gi|27904680|ref|NP_777806.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|29611784|sp|P59490|PTH_BUCBP RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|27904077|gb|AAO26911.1| peptidyl-tRNA hydrolase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 207
Score = 161 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 5/172 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH-SFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NP +Y + RHN+G ++ + + KF +E + ++
Sbjct: 5 KLIVGLANPIKKYNDTRHNVGSWLVNSLVTQQNKKLKKNNKFLGYSTEINILSKNIHVLV 64
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
P TFMNLSG S+L + NFY + E LV+HD+LDL G ++ + GHNG++++
Sbjct: 65 PDTFMNLSGISVLAISNFYNIKLHE-ILVVHDELDLKPGNVKFRLRSSHNGHNGIRNVLA 123
Query: 121 KCGKN--YKRLRIGIGRPPDTA-HIIRHVLGNFSSPERYFLLPIIDNIARSL 169
G N + R++IGIGRP ++ I + VL + E+ + I R +
Sbjct: 124 VLGTNIKFLRIQIGIGRPINSGYKISKFVLSKPNVSEKLLINRAILCAIRVI 175
>gi|147676448|ref|YP_001210663.1| peptidyl-tRNA hydrolase [Pelotomaculum thermopropionicum SI]
gi|146272545|dbj|BAF58294.1| peptidyl-tRNA hydrolase [Pelotomaculum thermopropionicum SI]
Length = 165
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 56/161 (34%), Positives = 91/161 (56%), Gaps = 3/161 (1%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
M IDR+ K+ F A + +G++DG + +L KPQT+MNLSG+++ ++N+Y L
Sbjct: 1 MVIDRLAPALGITVGKRMFKALVGQGRIDGEKVVLAKPQTYMNLSGEAVGALLNWYGLTP 60
Query: 84 LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK-NYKRLRIGIGRPPDTA-H 141
+ +V++DDLDL G LRL+ GGG GH G++S+ G N+ R+R+GIGRP +
Sbjct: 61 A-DLIVVYDDLDLPPGKLRLRAGGGAGGHKGVQSVIRVLGTENFARVRVGIGRPAEPGLD 119
Query: 142 IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
+VL F E + +D A ++ + + +N
Sbjct: 120 PAGYVLSRFDRDEVEIMREALDLAAAAVLCMVRDGVDRAMN 160
>gi|330842881|ref|XP_003293397.1| hypothetical protein DICPUDRAFT_41953 [Dictyostelium purpureum]
gi|325076287|gb|EGC30086.1| hypothetical protein DICPUDRAFT_41953 [Dictyostelium purpureum]
Length = 184
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 5/166 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+I+ GLGNPG +Y + RHN+GF +DRI F K + I + + IL+KP
Sbjct: 1 YILVGLGNPGDKYLDTRHNVGFKVVDRICEL--FEQEKSQKKDNIIKPSKIIKQVILLKP 58
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
Q FMN SG S+ + + +P EN LV HD++ D G + +K GG + HNG+K I ++
Sbjct: 59 QNFMNRSGASIRNISTEFDVPT-ENILVFHDEITQDTGNIIMKANGGASNHNGVKDIIDR 117
Query: 122 C-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
+ + R ++G+G P + VL S+ + L I+ A
Sbjct: 118 LKTQKFSRFKLGVG-PKNNEPTHLFVLRRVSNENQPKLDSSIEKAA 162
>gi|150020071|ref|YP_001305425.1| aminoacyl-tRNA hydrolase [Thermosipho melanesiensis BI429]
gi|149792592|gb|ABR30040.1| Aminoacyl-tRNA hydrolase [Thermosipho melanesiensis BI429]
Length = 158
Score = 160 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 51/161 (31%), Positives = 83/161 (51%), Gaps = 13/161 (8%)
Query: 22 GFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKL 81
GFM +DRI + W+KK++ E S L+KP T+MNLSG E+ N+
Sbjct: 2 GFMFLDRIANN-----WRKKYNYEFSI----KENLFLVKPLTYMNLSG----EIFNYINP 48
Query: 82 PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAH 141
+ + +V++DD+ L G +R++ G GH G+KSI G ++ R+RIGIG PD
Sbjct: 49 KDFGDIIVVYDDVSLPLGKIRIRKKGSHGGHKGVKSIISHLGTDFNRIRIGIGPLPDNED 108
Query: 142 IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
++ VLG FS+ E + ++ +L + ++
Sbjct: 109 LVNFVLGEFSNRELEIVNKALNLSYEALKTIVNEGIDKAMS 149
>gi|145519768|ref|XP_001445745.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413211|emb|CAK78348.1| unnamed protein product [Paramecium tetraurelia]
Length = 188
Score = 160 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 8/149 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG Y RHN G + I + + I Q IL P
Sbjct: 23 LIVGLGNPGKIYENTRHNAGQLFIKHLAKEFNIKM-SDGQNGAIGSFQH----IILFNPL 77
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
+FMN SG + ++ + + N +++HDDLD G ++K GG GHNGLKSI +
Sbjct: 78 SFMNSSGHPIKKIADKANI-QTSNIIIVHDDLDNLPGRCKIKQGGSAEGHNGLKSIIQYM 136
Query: 123 GKNYKRLRIGIGRPPDTAH--IIRHVLGN 149
+ RL+IGIGRP + +V+
Sbjct: 137 DDKFIRLKIGIGRPNSKDPAIVSDYVMSK 165
>gi|289667604|ref|ZP_06488679.1| peptidyl-tRNA hydrolase [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 152
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Query: 40 KKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFG 99
K E ++ + G L+KP TFMNLSG+S+ + F+K+ E+ LV HD+LDL G
Sbjct: 3 SKLFGETAKVDIAGQPVWLLKPATFMNLSGKSVAAALRFWKIEP-EHLLVAHDELDLAPG 61
Query: 100 TLRLKTGGGDAGHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
T RLK GG G NGL+ G + RLR+GIG P ++ VLG + +
Sbjct: 62 TARLKFDGGHGGQNGLRDTIRLLGHGKFHRLRVGIGHPGHKDRVVSWVLGRAGREDDAAI 121
Query: 159 LPIIDNIARSLPLLAKREDVSFLNHIVSVRK 189
I LPL + + + + +K
Sbjct: 122 GTAIAAAIDVLPLAMEGNFSEAMKRLHTEKK 152
>gi|260772285|ref|ZP_05881201.1| peptidyl-tRNA hydrolase [Vibrio metschnikovii CIP 69.14]
gi|260611424|gb|EEX36627.1| peptidyl-tRNA hydrolase [Vibrio metschnikovii CIP 69.14]
Length = 161
Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats.
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Query: 41 KFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGT 100
KF ++G L+ P T+MNLSG+++ + FY++ E ++ HD+LDL G
Sbjct: 11 KFFGLTGRILVNGQDLRLLIPTTYMNLSGKAVAALAKFYQIKP-EEIMIAHDELDLPPGV 69
Query: 101 LRLKTGGGDAGHNGLKSISEKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFL 158
+ K GGG GHNGLK K G N + RLRIGIG P + +VL + E +
Sbjct: 70 AKFKQGGGHGGHNGLKDTISKLGNNKEFYRLRIGIGHPGHKDKVAGYVLSKAPNKEHECI 129
Query: 159 LPIIDNIARSLPLLAKREDVSFLNHIVSVR 188
L +D R L +L K N + + +
Sbjct: 130 LAAVDESVRCLDILLKDGLTKAQNRLHTFK 159
>gi|291225499|ref|XP_002732734.1| PREDICTED: peptidyl-tRNA hydrolase 1 homolog [Saccoglossus
kowalevskii]
Length = 228
Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats.
Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 10/172 (5%)
Query: 3 IVAGLGNPGHEYC--ENRHNIGFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDG-LRTIL 58
+V GLGN Y + RH++G ++RI + K +K +++ +DG IL
Sbjct: 40 LVVGLGN----YTMPDTRHSVGMTTVNRIANQMGLTWHKDRKCFGDVAVTTIDGDHHLIL 95
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP+ FMN++G S+++ Y+L + +IHDDLD FG +K G GHNG+KS
Sbjct: 96 LKPRLFMNVNGLSIVKCAKKYEL-QPSDIYLIHDDLDRSFGKYSIKLNGSARGHNGVKSA 154
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ R+RIGIGRP +I +VL F+ + L IID + +L
Sbjct: 155 MNCLKSDAMVRMRIGIGRPTTKNEVINYVLSQFTGEQLLILDGIIDGVVDTL 206
>gi|203288214|ref|YP_002223229.1| peptidyl-tRNA hydrolase [Borrelia recurrentis A1]
gi|226694248|sp|B5RQC4|PTH_BORRA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|201085434|gb|ACH95008.1| peptidyl-tRNA hydrolase [Borrelia recurrentis A1]
Length = 188
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 7/188 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG + RHN+GF ID++ + K K + E ++ +D R +LIKP
Sbjct: 3 LLIVGLGNPGSNFLHTRHNVGFGLIDKLVMKNALSLRKAK-NYEYADFNVDSRRIVLIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG V + + + + N LV+ D++DL G RL+ GG + HNGL+SISE
Sbjct: 62 LTYMNLSGNIFPCVFSKFYMK-INNLLVVVDNVDLPLGKCRLRKVGGASTHNGLRSISES 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y RL IG+G + VL F+ E + + + ++ + ++ SF
Sbjct: 121 LGSTKYGRLYIGVGNNSAFG-LKDFVLSKFNDSELVRVKNVFNFLS---EEILGIDEFSF 176
Query: 181 LNHIVSVR 188
+ I ++
Sbjct: 177 EHKIATIN 184
>gi|203284681|ref|YP_002222421.1| peptidyl-tRNA hydrolase [Borrelia duttonii Ly]
gi|226694247|sp|B5RMX9|PTH_BORDL RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|201084124|gb|ACH93715.1| peptidyl-tRNA hydrolase [Borrelia duttonii Ly]
Length = 188
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 7/188 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG + RHN+GF ID++ + K K + E ++ +D R +LIKP
Sbjct: 3 LLIVGLGNPGSNFLHTRHNVGFGLIDKLVMKNALSLRKAK-NYEYADFNIDSRRIVLIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG V + + + + N LV+ D++DL G RL+ GG + HNGL+SISE
Sbjct: 62 LTYMNLSGNIFPFVFSKFYMK-INNLLVVVDNVDLPLGKCRLRKVGGASTHNGLRSISES 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G Y RL IG+G + VL F+ E + + + ++ + ++ SF
Sbjct: 121 LGSTKYGRLYIGVGNN-SAFALKDFVLSKFNDSELVRVKNVFNFLS---EEILGIDEFSF 176
Query: 181 LNHIVSVR 188
+ I ++
Sbjct: 177 EHKIATIN 184
>gi|15639995|ref|NP_219448.1| peptidyl-tRNA hydrolase [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189026234|ref|YP_001934006.1| peptidyl-tRNA hydrolase [Treponema pallidum subsp. pallidum SS14]
gi|6647698|sp|O83975|PTH_TREPA RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|238689354|sp|B2S4P8|PTH_TREPS RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|3323339|gb|AAC65962.1| peptidyl-tRNA hydrolase (pth) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018809|gb|ACD71427.1| peptidyl-tRNA hydrolase [Treponema pallidum subsp. pallidum SS14]
gi|291060368|gb|ADD73103.1| peptidyl-tRNA hydrolase [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 202
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 65/192 (33%), Positives = 99/192 (51%), Gaps = 7/192 (3%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG---QLDGLRTILI 59
++ LGNPG EY E RHN ++ + + P W+ I+ + L+
Sbjct: 5 LIVFLGNPGAEYEETRHNAAWLLLTYLFPSIVLP-WRCGCRGSIARIEGFEGSSEEVWLL 63
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP T+MN SG+S+ F + + + LV+HD+L+L FG + LK GGG GHNGL+SI
Sbjct: 64 KPLTYMNRSGKSVGAACAFLQ-TDAKQLLVVHDELELPFGVVSLKQGGGLGGHNGLRSIK 122
Query: 120 EKCGK-NYKRLRIGIGRPP-DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
E G ++ RLRIGIGRPP ++ +I ++VL F E + L L +
Sbjct: 123 EVLGTADFWRLRIGIGRPPSESVNIAQYVLSAFYPAEMAAFPKLGRATRDLLCQLVVTDQ 182
Query: 178 VSFLNHIVSVRK 189
+ + + + RK
Sbjct: 183 AATVTLLSAWRK 194
>gi|32491099|ref|NP_871353.1| peptidyl-tRNA hydrolase [Wigglesworthia glossinidia endosymbiont of
Glossina brevipalpis]
gi|31340302|sp|Q8D2K4|PTH_WIGBR RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|25166306|dbj|BAC24496.1| pth [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 191
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 59/188 (31%), Positives = 94/188 (50%), Gaps = 4/188 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEIS-EGQLDGLRTILI 59
+ ++ GL NP + Y RHNIG I + + K K + + ++ + L+
Sbjct: 3 LKLIVGLSNPINLYYNTRHNIGSWYIKFLAKKYKKNLIKNKKYCFYYIDVKIGDYYSKLV 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T+MN++G + + NFYK+ + E L++HDDLDLD G R K ++ HNG+KSI
Sbjct: 63 IPDTYMNVNGTIIYNITNFYKIYSNE-MLIVHDDLDLDTGIARFKFNHKNSTHNGIKSIY 121
Query: 120 EKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+ G + LRIGIGRP +I ++L N S E + I + +L K+
Sbjct: 122 KSFGAKCIFNTLRIGIGRPKLNKNINSYLLNNPSPKEEILIKKTITKCIKCTDVLIKKNK 181
Query: 178 VSFLNHIV 185
+N +
Sbjct: 182 DHAMNILH 189
>gi|187918639|ref|YP_001884205.1| peptidyl-tRNA hydrolase [Borrelia hermsii DAH]
gi|238689298|sp|B2S1C9|PTH_BORHD RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|119861487|gb|AAX17282.1| peptidyl-tRNA hydrolase [Borrelia hermsii DAH]
Length = 188
Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 4/186 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG + RHN+GF +D + + K K + E S+ + R +LIKP
Sbjct: 3 LLIVGLGNPGSNFFHTRHNVGFELVDNLVIKNGLSLKKVK-NYEYSDFNFENKRIVLIKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T+MNLSG V + + + N LV+ D++DL G +L+ GG + HNGL+SIS
Sbjct: 62 LTYMNLSGNIFPSVFAKFYMK-IANLLVVVDNVDLPLGKCKLRKVGGTSTHNGLRSISLS 120
Query: 122 CG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G NY RL IG+G + + + VL F E + + + ++ + + +
Sbjct: 121 LGSTNYGRLYIGVGSN-NESSLREFVLAKFRGSELERIKSVFEFLSEEILGIDESNFEHK 179
Query: 181 LNHIVS 186
+ I S
Sbjct: 180 VATINS 185
>gi|223974357|gb|ACN31366.1| unknown [Zea mays]
Length = 166
Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 48/113 (42%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG Y RHN+GF ID I +F A + +G++ +L KP
Sbjct: 53 WLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDASIMLAKP 112
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
QTFMN SG+S+ ++++++K+P L +V++DDLDL F LRL GG GHNG
Sbjct: 113 QTFMNASGESVGQLVSYFKIP-LSQVVVMYDDLDLPFAKLRLLPKGGHGGHNG 164
>gi|33519805|ref|NP_878637.1| peptidyl-tRNA hydrolase [Candidatus Blochmannia floridanus]
gi|33504150|emb|CAD83412.1| peptidyl-tRNA hydrolase [Candidatus Blochmannia floridanus]
Length = 197
Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 5/188 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRI-HSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
++AG+GN G +Y RHN G I + F + I + Q+ L+
Sbjct: 4 KLIAGIGNIGAKYINTRHNCGHKYIYLLSQKFKVHLKYNNILCGYIGKFQILEHTVKLLI 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGG-DAGHNGLKSIS 119
P +++N SG S+ + +NFY L +L LV HD+LDL GT++++ G + H+G+++I
Sbjct: 64 PNSYVNNSGISVSKCVNFYGL-SLREILVAHDELDLYPGTIKIQLGKRRNESHHGIQNII 122
Query: 120 EKCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
+K G ++ RLRIGIGRP + II VL S E + I++ + +
Sbjct: 123 DKLGNRYDFYRLRIGIGRPCNKNEIINFVLNIPSVHEGIQIDFIVNKVVFFTEDIVLNNF 182
Query: 178 VSFLNHIV 185
V +N +
Sbjct: 183 VKVMNQLH 190
>gi|262361962|gb|ACY58683.1| peptidyl-tRNA hydrolase [Yersinia pestis D106004]
Length = 165
Score = 159 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 59/173 (34%), Positives = 84/173 (48%), Gaps = 16/173 (9%)
Query: 18 RHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMN 77
RHN + KF + L G L+ P TFMNLSG+++ + +
Sbjct: 4 RHN-------------QSLKEESKFFGYTARLNLAGQDIRLLVPATFMNLSGKAVAAMAS 50
Query: 78 FYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN--YKRLRIGIGR 135
FY++ E LV HD+LD+ G +LK GGG+ GHNGLK I K G N + RLRIGIG
Sbjct: 51 FYRILP-EEILVAHDELDILPGMAKLKLGGGNGGHNGLKDIQNKLGNNPNFYRLRIGIGH 109
Query: 136 PPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVSVR 188
P D + + VLG + E+ + ID R +L +N + + +
Sbjct: 110 PGDKSKVTGFVLGKPPASEQTLIDDAIDESIRCTEVLLNEGMTKAMNRLHAFK 162
>gi|194246618|ref|YP_002004257.1| peptidyl-tRNA hydrolase [Candidatus Phytoplasma mali]
gi|254783882|sp|B3QZM3|PTH_PHYMT RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|193806975|emb|CAP18410.1| Peptidyl-tRNA hydrolase [Candidatus Phytoplasma mali]
Length = 176
Score = 159 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 4/177 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILI 59
M ++ GLGNPG Y HNIGFM ID + + KK ++ I + + + +
Sbjct: 1 MKLIVGLGNPGQNYQFTLHNIGFMMIDYLLNTIITDKKIVKKHNSYIYKANVGSNLVLFV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KPQT+MN SG ++ +++N YK+ L + LV+ DD+ L G +LK GG GHNGL++I
Sbjct: 61 KPQTYMNSSGHAVKKILNEYKII-LNDLLVLSDDIYLPEGNYKLKLKGGHGGHNGLRNII 119
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+ K +KRL+IG+ + + ++L ++ + I+ + +
Sbjct: 120 DCLQTKKFKRLKIGVSQD-HNISLEDYLLTPIDDKKKLMVQKSFPIISNIIKNFIQD 175
>gi|213618786|ref|ZP_03372612.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 115
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L+G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
P TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG GHN
Sbjct: 64 PTTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHGGHN 115
>gi|115453001|ref|NP_001050101.1| Os03g0347800 [Oryza sativa Japonica Group]
gi|122247022|sp|Q10LI6|CRS2L_ORYSJ RecName: Full=CRS2-like protein, chloroplastic; AltName:
Full=Chloroplastic RNA splicing factor 2-like protein;
Flags: Precursor
gi|108708119|gb|ABF95914.1| Peptidyl-tRNA hydrolase, putative, expressed [Oryza sativa Japonica
Group]
gi|113548572|dbj|BAF12015.1| Os03g0347800 [Oryza sativa Japonica Group]
gi|215707163|dbj|BAG93623.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 186
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG +Y RHN+GF ID + F A EG ++G+ +L KP
Sbjct: 61 WLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLAKP 120
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
QT+MNLSG+S+ + +YKLP L LV DD+DL G LRL+ GG HNG
Sbjct: 121 QTYMNLSGESVGPLAAYYKLP-LNRVLVAFDDMDLPCGVLRLQPKGGYGRHNG 172
>gi|152993637|ref|YP_001359358.1| peptidyl-tRNA hydrolase [Sulfurovum sp. NBC37-1]
gi|166229462|sp|A6QBZ2|PTH_SULNB RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|151425498|dbj|BAF73001.1| peptidyl-tRNA hydrolase, PTH1 family [Sulfurovum sp. NBC37-1]
Length = 189
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 73/188 (38%), Positives = 105/188 (55%), Gaps = 10/188 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILI 59
M + GLGNPG +Y + RHNIGF ID + K F E+ T+ +
Sbjct: 1 MTLFVGLGNPGSKYEDTRHNIGFKVIDSLVDDLGARNISKNAFQGELYRI----ANTLFL 56
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
KP TFMNLSG+S+ V F+K+ LE+ +VIHDD+DL FG +R K GGG GHNGL+S+
Sbjct: 57 KPTTFMNLSGKSIETVKQFFKI-ELEDIIVIHDDIDLPFGAVRFKRGGGHGGHNGLRSLD 115
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
GK Y R+RIG+G+P + + +VL FS E + ++ +++ + L +
Sbjct: 116 AHIGKEYIRVRIGVGKPEHKSQVADYVLHRFSEEEEKEIERLVKHVSNACKALLCED--- 172
Query: 180 FLNHIVSV 187
LN + S
Sbjct: 173 -LNKVKSY 179
>gi|299473500|emb|CBN77896.1| peptidyl-tRNA hydrolase [Ectocarpus siliculosus]
Length = 175
Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 89/175 (50%), Gaps = 4/175 (2%)
Query: 17 NRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEV 75
RHN GF+ + + H K F E +++ +++P T+MN SG S +V
Sbjct: 2 TRHNAGFLVAEELARRHGGTLKIKTAFQGEYCSVRVNDKSVGILRPITYMNNSGMSARKV 61
Query: 76 MNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC-GKNYKRLRIGIG 134
M+F+KLP +++ D++ LDFG LRLK GG GHNGLKS+ Y RLRIG+G
Sbjct: 62 MDFFKLPMNAAIVLV-DEVALDFGQLRLKGKGGAGGHNGLKSLQAHLKTPEYTRLRIGVG 120
Query: 135 RPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED-VSFLNHIVSVR 188
+ + HVLG F+ E+ L +I + ++ + ED + S R
Sbjct: 121 ASKFSEALSDHVLGEFTRTEKKELDNVIADACDAVEHWVEEEDMAKVMTRFNSAR 175
>gi|150863914|ref|XP_001382560.2| hypothetical protein PICST_30021 [Scheffersomyces stipitis CBS
6054]
gi|149385170|gb|ABN64531.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 214
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 10/183 (5%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKF--HAEISEGQLDGLRTIL 58
+ +A +GNP +Y +HNIG +D++ + WK +
Sbjct: 25 LLFIASIGNPEPKYEGTKHNIGHRMLDQLVDIY----WKDHLVKDGPYYRSTKYSNIVLF 80
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRL-KTGGGDAGHNGLKS 117
+ MNL G+++ + ++ + +++HD+L + G ++ K GHNGLKS
Sbjct: 81 KSNDSLMNLQGKAVSK--HYRQFQKDSQLVILHDELQVPVGKYQIRKPSTSPRGHNGLKS 138
Query: 118 ISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL-PIIDNIARSLPLLAKRE 176
I++ NY ++ IGIGRP D H++ +V+ F E L ++ + L L + +
Sbjct: 139 INQHLPNNYTKVAIGIGRPSDKRHVVDYVMSKFKDSELEELDFEVLPKCVKELEKLVEMD 198
Query: 177 DVS 179
+
Sbjct: 199 KEA 201
>gi|294655226|ref|XP_457330.2| DEHA2B08602p [Debaryomyces hansenii CBS767]
gi|199429785|emb|CAG85334.2| DEHA2B08602p [Debaryomyces hansenii]
Length = 252
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 14/188 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT----- 56
++A +GNP +Y RHN+G +D + + H+ + + H I +G R
Sbjct: 47 LMIASIGNPEPQYQGTRHNVGHWALDELITNHWTSFNQFQNHKNIPDGVYSTSRVEDLSD 106
Query: 57 -ILIKP-QTFMNLSGQSL----LEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTG-GGD 109
L K +FMNL G + +V N+ K +V+HD+L + FG +++
Sbjct: 107 IFLFKSIYSFMNLQGAPVSKTWQKVSNYQKATRSPALVVLHDELQVPFGKFQIRKQLSSA 166
Query: 110 AGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL-PIIDNIARS 168
GHNGL+SI G Y ++ IGIG+P + +VL F+ E+ L ++ I
Sbjct: 167 RGHNGLRSIDSLMGGGYTKISIGIGKPTAK-DLSNYVLSPFTPLEQEVLTYDVMPQIVNV 225
Query: 169 LPLLAKRE 176
L + +
Sbjct: 226 LQEMKDGK 233
>gi|46447227|ref|YP_008592.1| peptidyl-tRNA hydrolase [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400868|emb|CAF24317.1| putative peptidyl-tRNA hydrolase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 198
Score = 157 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 4/167 (2%)
Query: 22 GFMCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYK 80
G++ I + + + + K+F+A IS+G ++ LI P T+MNLSG ++ ++F+K
Sbjct: 2 GYLVIKSLANKLGWSFKEDKRFNALISKGMVENKSVHLILPLTYMNLSGTAVKRYLDFFK 61
Query: 81 LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN-YKRLRIGIGRPPDT 139
P + N V+ DD+ L FG L+LKT G GHNGLKS+ G + Y RL++GIG P +
Sbjct: 62 FP-MTNLFVVTDDISLSFGKLKLKTMGSAGGHNGLKSVETHLGTSHYNRLKMGIGHPGEK 120
Query: 140 AHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVS 186
+ +VL F+ E L +D L L K +N + +
Sbjct: 121 -NFASYVLDVFTQEELQVLATFVDRGVEVLLRLIKESVSQVMNAVNT 166
>gi|256751656|ref|ZP_05492531.1| Aminoacyl-tRNA hydrolase [Thermoanaerobacter ethanolicus CCSD1]
gi|256749465|gb|EEU62494.1| Aminoacyl-tRNA hydrolase [Thermoanaerobacter ethanolicus CCSD1]
Length = 113
Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 52/106 (49%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
M+++AGLGNPG EY RHN+GFM ID + K KF + + +G G + IL+K
Sbjct: 1 MYVIAGLGNPGREYEGTRHNVGFMVIDELAKKLGMNVTKLKFKSLVGDGNFKGEKIILLK 60
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTG 106
PQTFMN SG++L + +NFYK+P LEN +VI+DD DLD G +R++
Sbjct: 61 PQTFMNSSGEALYDAVNFYKIP-LENVIVIYDDKDLDVGKIRIRKK 105
>gi|145531739|ref|XP_001451636.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419291|emb|CAK84239.1| unnamed protein product [Paramecium tetraurelia]
Length = 188
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG+ Y RHN G + + + I Q I+ P
Sbjct: 23 LIVGLGNPGNIYENTRHNAGQQFVKHLAKEFGIKM-SDGSNGSIGSFQH----IIVFNPL 77
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
+FMN SG ++ ++ + + N +++HDDL+ G ++K GG GHNGLKSI +
Sbjct: 78 SFMNSSGHAIKKIADKANI-QTSNIIIVHDDLENLPGRCKIKQGGSAEGHNGLKSIIQYM 136
Query: 123 GKNYKRLRIGIGRPPDTAH--IIRHVLGN 149
+ RL+IGIGRP + +V+
Sbjct: 137 DDKFIRLKIGIGRPNSKDPAIVSDYVMSK 165
>gi|217076516|ref|YP_002334232.1| peptidyl-tRNA hydrolase [Thermosipho africanus TCF52B]
gi|217036369|gb|ACJ74891.1| peptidyl-tRNA hydrolase [Thermosipho africanus TCF52B]
Length = 159
Score = 156 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 49/163 (30%), Positives = 87/163 (53%), Gaps = 9/163 (5%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
M IDR+ + +KK+ + + + L G + +KP T+MNLSG E+ + +
Sbjct: 1 MFIDRVCNN-----FKKQNNYKYCQKTLFGKDILFVKPFTYMNLSG----EIFRYLNKED 51
Query: 84 LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHII 143
+ +V++DD++L G +R++ G GHNG+KS+ G+++KR+RIGIG P+ +++
Sbjct: 52 FSDIIVVYDDVNLPLGKIRIRKSGSSGGHNGIKSLISYLGEDFKRIRIGIGPIPENVNLV 111
Query: 144 RHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVS 186
VLG F E L ++D +L + K ++ S
Sbjct: 112 DFVLGEFEEDELKVLDKVLDLSIDALYTIFKDGIDKAMSLYNS 154
>gi|313107334|ref|ZP_07793529.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa 39016]
gi|310880031|gb|EFQ38625.1| peptidyl-tRNA hydrolase [Pseudomonas aeruginosa 39016]
Length = 154
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 40 KKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFG 99
+K+ + + G L+ P T+MN SGQS+ + F+++ + LV HD+LD+ G
Sbjct: 4 RKYFGLVGKFSHQGKDVRLLIPTTYMNRSGQSVAALAGFFRIAP-DAILVAHDELDMPPG 62
Query: 100 TLRLKTGGGDAGHNGLKSISEKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYF 157
+LKTGGG GHNGL+ I + G + RLR+GIG P ++ + +VLG E+
Sbjct: 63 VAKLKTGGGHGGHNGLRDIIAQLGNQNSFHRLRLGIGHPGHSSLVSGYVLGRAPRSEQEL 122
Query: 158 LLPIIDNIARSLPLLAKREDVSFLNHIVSVR 188
L ID LP + + + + S +
Sbjct: 123 LDTSIDFALGVLPEMLAGDWTRAMQKLHSQK 153
>gi|224079331|ref|XP_002305824.1| predicted protein [Populus trichocarpa]
gi|222848788|gb|EEE86335.1| predicted protein [Populus trichocarpa]
Length = 161
Score = 154 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG +Y RHN+GF IDRI + A I G + + +L KP
Sbjct: 50 WLIVGLGNPGTKYHGTRHNVGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAKP 109
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
Q +MN SG+S+ + YK+P L + L+I+D+++L G LR++ GG HNG
Sbjct: 110 QAYMNFSGESVGPLAAHYKIP-LRHILLIYDEMNLPNGILRVQPKGGHGHHNG 161
>gi|254576859|ref|XP_002494416.1| ZYRO0A00946p [Zygosaccharomyces rouxii]
gi|238937305|emb|CAR25483.1| ZYRO0A00946p [Zygosaccharomyces rouxii]
Length = 191
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSF---HFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
G+GNP +Y RHN+G + +D + + +K + Q+ ++
Sbjct: 13 GIGNPEPKYAGTRHNVGLIILDLLKNRFDAEQIHPYKVSSLSPAKYCQISSQLVMIRSDG 72
Query: 63 TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRL-KTGGGDAGHNGLKSISEK 121
+MNLSG++++ + N + ++V+HD+L L G ++L K G GHNGLKSI
Sbjct: 73 DYMNLSGKTVVPMWNRLPHRDHVTHVVLHDELSLPLGKVQLRKPGTSLRGHNGLKSIQNC 132
Query: 122 -CGKNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLL 159
N+ RL +GIGRPP + +VL F E L
Sbjct: 133 WRNDNFYRLSVGIGRPPQRDSTVVSDYVLSKFDERELEILQ 173
>gi|118349377|ref|XP_001033565.1| peptidyl-tRNA hydrolase, putative [Tetrahymena thermophila]
gi|89287914|gb|EAR85902.1| peptidyl-tRNA hydrolase, putative [Tetrahymena thermophila SB210]
Length = 228
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD------------G 53
GLGNP Y + H+IG + I+ + + + + + G
Sbjct: 43 GLGNPSPNYDKTLHSIGKVYINHLARVYKAEFKQSRGKGFFAAFNFANRGEYALIRNSKG 102
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
+ L K +FMNLSG + + N ++HDDL+ G ++K GG GHN
Sbjct: 103 EQVALFKSDSFMNLSGVPYKQFLKNCDTIQYANQYIVHDDLESKPGKFKIKNGGSPEGHN 162
Query: 114 GLKSISEKCG-KNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPE----RYFLLPIIDN 164
GLKSI + G K+++RL+IGIGRP + +V N SS E + + P ID
Sbjct: 163 GLKSIIDSIGSKDFQRLKIGIGRPDSKDPEVVANYVTSNISSEEYRRYKEEIFPQIDE 220
>gi|301095928|ref|XP_002897063.1| peptidyl-tRNA hydrolase, putative [Phytophthora infestans T30-4]
gi|262108492|gb|EEY66544.1| peptidyl-tRNA hydrolase, putative [Phytophthora infestans T30-4]
Length = 320
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 93/251 (37%), Gaps = 65/251 (25%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKF--------HAEISEGQLDG 53
++ GLGNPG++Y RHNIGF + + K H +++ ++
Sbjct: 51 KLIVGLGNPGNKYTNTRHNIGFAAMRHFLETYASQVTGKNLELQHEAGNHGDVARFRVAF 110
Query: 54 LR-------------------------------------TILIKPQTFMNLSGQSLLEVM 76
+ ++ P T+MN SG ++ M
Sbjct: 111 QQNAADKDYSFPIDDLVNRSSKRAKERTLKEGVPHEEVNVAMLLPTTYMNCSGTAVRAFM 170
Query: 77 NFYK---------LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN-Y 126
++ L + LV+ DD+ L FG R K GG G NG++ I + G +
Sbjct: 171 QSHRWRLKKNPLSLNRQDELLVVTDDVALPFGECRFKAKGGPGGQNGVRDIIKCTGSERF 230
Query: 127 KRLRIGIGRP----------PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
RLRIG+G P P + ++VLG F+ E+ + ++ L L R
Sbjct: 231 ARLRIGVGAPYWFAGGNSGAPSGTAMDKYVLGRFNGDEQNAMPDLLRYTNELLRLYLHRG 290
Query: 177 DVSFLNHIVSV 187
+ S+
Sbjct: 291 VAQATTYANSM 301
>gi|323261010|gb|EGA44605.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
Length = 112
Score = 152 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L+G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWYVDLLAERLRAPLREEPKFFGYTSRITLEGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
P TFMNLSG+++ + +FY++ + LV HD+LDL G + K GGG
Sbjct: 64 PTTFMNLSGKAVGAMASFYRI-QPDEILVAHDELDLPPGVAKFKLGGGHG 112
>gi|171910046|ref|ZP_02925516.1| peptidyl-tRNA hydrolase [Verrucomicrobium spinosum DSM 4136]
Length = 175
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 10/164 (6%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
M +D + F +W + + + + G L+KP T+MN SG+++ V FYK+
Sbjct: 1 MVVDALAG-QFSASWGHEKRWDCALAKFSGG--WLLKPFTYMNASGEAVSSVCRFYKI-Q 56
Query: 84 LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK-NYKRLRIGI----GRPPD 138
E L ++DD+DL G++R + G AGHNG++S+ G + RL++GI GRP
Sbjct: 57 PEEVLAVYDDVDLSLGSMRFRMNGRPAGHNGVRSLISHLGTEEFPRLKVGIAGEQGRPAG 116
Query: 139 TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
++ HVLG FS E+ + + ++ + +N
Sbjct: 117 -DRMVGHVLGRFSEAEQPLVQTAVSRAVEAVRSALNTGLENAMN 159
>gi|24215049|ref|NP_712530.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str.
56601]
gi|45657470|ref|YP_001556.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|46576821|sp|Q8F3Q2|PTH_LEPIN RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|59798053|sp|Q72RZ0|PTH_LEPIC RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|24196101|gb|AAN49548.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str.
56601]
gi|45600709|gb|AAS70193.1| peptidyl tRNA hydrolase [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
Length = 190
Score = 151 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 65/181 (35%), Positives = 101/181 (55%), Gaps = 3/181 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ G+GNPG +Y NRHNIGF I +++ ++ DG+ +KP
Sbjct: 6 LLLVGIGNPGQKYVHNRHNIGF-VILDSLLDSSSVSYQTNSKYSLARTDEDGVTIFYLKP 64
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
FMNLSG+S+ E+ + + EN L+IHD++D +FG L+LK GGG AGHNGL++I EK
Sbjct: 65 LEFMNLSGKSVAEIAKKNGI-SPENILIIHDEIDFEFGKLKLKGGGGHAGHNGLRNIVEK 123
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G N + RLR G+G+P T+ + +VL NF E+ + ++ + + + F
Sbjct: 124 LGTNTFFRLRFGVGKPSITSEVPDYVLSNFLPNEKEKIPELVKVSLQKISDWIRERKNGF 183
Query: 181 L 181
Sbjct: 184 Q 184
>gi|320582847|gb|EFW97064.1| peptidyl-tRNA hydrolase [Pichia angusta DL-1]
Length = 214
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
+V +GNP +Y RH++G + + + F K + + D +L +
Sbjct: 28 LVVSIGNPEAQYHGTRHSVGHLILKNLCESQGFSQIK-QINGFKFRCNTDKPDVLLYQTP 86
Query: 63 TFMNLSG----QSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRL-KTGGGDAGHNGLKS 117
FMNLSG + +M + + +V+HD+LDLD G +R+ K GHNGLKS
Sbjct: 87 GFMNLSGKNLAKPWKALMAQPQWNPV--LVVLHDELDLDLGKVRVRKQNSSARGHNGLKS 144
Query: 118 ISEKCGKNYKRLRIGIGRPPDTAH----IIRHVLGNFSSPERYFL-LPIIDNIARSLPLL 172
I + GK Y ++IGIGR + + R+VL FS+ E L ++ +A + +
Sbjct: 145 IQQHIGKGYNAIQIGIGRDSNREKDPDAVSRYVLSKFSAQEAEQLHQQVVPQVAAIIEEM 204
>gi|218961880|ref|YP_001741655.1| peptidyl-tRNA hydrolase [Candidatus Cloacamonas acidaminovorans]
gi|167730537|emb|CAO81449.1| peptidyl-tRNA hydrolase [Candidatus Cloacamonas acidaminovorans]
Length = 198
Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 18/194 (9%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTI--- 57
M ++ GLGNPG E+ NRHN+GF+C+DR W ++G + +
Sbjct: 1 MKLIIGLGNPGKEFANNRHNLGFICLDR---------WALGRERNFAKGDVFDYIVLKRA 51
Query: 58 -LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
LIKP+T+MN SG+++ + + + + Y+VI+DD++L +R++ GGGD GHNG+K
Sbjct: 52 VLIKPKTWMNRSGEAIKQALKQWII---SEYMVIYDDIELPVAKIRIRQGGGDGGHNGIK 108
Query: 117 SISEKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
S+ + KR+RIGIGR + +VL + E L P +D + + L K
Sbjct: 109 SLLAVIPPEELKRIRIGIGRN-NEIDPQNYVLSDILPEEWELLNPALDQAGKFIDLYIKY 167
Query: 176 EDVSFLNHIVSVRK 189
+ + LN +K
Sbjct: 168 DFNAVLNEYSIWKK 181
>gi|330988613|gb|EGH86716.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 148
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
Query: 43 HAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLR 102
G L+ P T+MN SGQ++ + FY++P +E+ LV HD+LDL G +
Sbjct: 1 FGLTGRFTHQGQDVRLLIPTTYMNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAK 59
Query: 103 LKTGGGDAGHNGLKSISEKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLP 160
LK GGG GHNGL+ I + G + RLR+GIG P D + + VLG E+ L
Sbjct: 60 LKVGGGHGGHNGLRDIIAQLGNQNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDA 119
Query: 161 IIDNIARSLPLLAKREDVSFLNHIVSVR 188
ID LP + E + ++ S +
Sbjct: 120 SIDFALGVLPDIFAGEWNRAMKNLHSQK 147
>gi|38233496|ref|NP_939263.1| peptidyl-tRNA hydrolase [Corynebacterium diphtheriae NCTC 13129]
gi|68052966|sp|Q6NI78|PTH_CORDI RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|38199756|emb|CAE49416.1| Putative peptidyl tRNA hydrolase [Corynebacterium diphtheriae]
Length = 184
Score = 149 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 67/180 (37%), Positives = 105/180 (58%), Gaps = 6/180 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF----FPAWKKKFHAEISEGQLDGLRTI 57
+++ GLGN G EY + RHNIG+M ID + + KK + ++E +L + I
Sbjct: 5 YLIVGLGNLGPEYTKTRHNIGYMAIDELLTRTSPMPATLTVHKKTNTLVAETRLGTQKVI 64
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
+ KP+ FMN++G S+ ++ +F+ + + +V++DDLDL+FG ++ + GGGD GHNGLKS
Sbjct: 65 VAKPRAFMNVTGPSVRKLADFFTV-DRNRIVVLYDDLDLEFGAIKFRHGGGDHGHNGLKS 123
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
I++ G K+Y R IGIGRPP VL FS E+ L + + A + + E
Sbjct: 124 ITQALGTKDYIRGGIGIGRPPGRMAPKSFVLKPFSKIEQSELPIVCADAADEVEKITTSE 183
>gi|68464699|ref|XP_723427.1| hypothetical protein CaO19.4740 [Candida albicans SC5314]
gi|68465074|ref|XP_723236.1| hypothetical protein CaO19.12202 [Candida albicans SC5314]
gi|46445262|gb|EAL04531.1| hypothetical protein CaO19.12202 [Candida albicans SC5314]
gi|46445460|gb|EAL04728.1| hypothetical protein CaO19.4740 [Candida albicans SC5314]
Length = 210
Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 9/181 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+A +GNP +Y RHN G ++++ ++ KK +S + +L K
Sbjct: 24 LFIASIGNPEPQYANTRHNAGHRLMNQLIDVYWKDHVYKKGPYYLSTKYSN---LVLFKS 80
Query: 62 Q-TFMNLSGQSLLEVMNFYKLPNLEN-YLVIHDDLDLDFGTLRL-KTGGGDAGHNGLKSI 118
+ MNL G + + +F K ++ +V+HD+L +D G ++ K G GHNGLKSI
Sbjct: 81 NDSLMNLQGLPISK--HFGKHDQGKSALVVLHDELQVDLGKYQIRKPGTSSRGHNGLKSI 138
Query: 119 SEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL-PIIDNIARSLPLLAKRED 177
+ Y +L IGIGRPP + ++ +VL NFSS E + ++ + L + ++
Sbjct: 139 DKYLKNRYFKLGIGIGRPPASQSVVHYVLKNFSSQELDVIDWEVLPKCVKDLENMVIKDL 198
Query: 178 V 178
Sbjct: 199 E 199
>gi|317968636|ref|ZP_07970026.1| peptidyl-tRNA hydrolase [Synechococcus sp. CB0205]
Length = 184
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 24 MCIDRIHSFHFFPAWK-KKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLP 82
M ++++ + K HA +E R L+ PQT+MN SG+S+ ++++
Sbjct: 1 MALEQLAKRQNSSFKQQSKLHALAAEVGQGAERLRLLMPQTYMNDSGRSIRAALDWFGFE 60
Query: 83 NLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC-GKNYKRLRIGIGRP----- 136
L++ DD+DL G LRL+ GG GHNGL+S G+ + RLRIGIG P
Sbjct: 61 P-NQMLILVDDMDLPLGRLRLRLSGGAGGHNGLRSTIAHLGGQEFPRLRIGIGAPALNPV 119
Query: 137 PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVSV 187
+ HVLG F+ E+ L +ID + L L+ + N +
Sbjct: 120 ERKQRTVGHVLGRFAVAEQPVLEEVIDEVLAGLDLIQRLGFERAGNRLNGF 170
>gi|296415249|ref|XP_002837304.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633165|emb|CAZ81495.1| unnamed protein product [Tuber melanosporum]
Length = 188
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 55/182 (30%), Positives = 90/182 (49%), Gaps = 14/182 (7%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK--FHAEISEGQLDGLRTILIK 60
+V +GNPG +Y RH+ G + + FP ++K + +S G D T+
Sbjct: 7 LVCSIGNPG-QYLNTRHSAGHTLSNLLQGTLAFPPFRKSASYGGNVSMGGFDSTYTLFQS 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLEN------YLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
P + MN+SG+S+ + + E +V+HD+L+ G +++K GG GHNG
Sbjct: 66 P-SLMNVSGKSVKKAWKAFMAELSEEEKKNALLVVLHDELEAAPGRVKVKKGGSAKGHNG 124
Query: 115 LKSISEKCG-KNYKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLL-PIIDNIARSLP 170
+ S E G K++ R+ IGIGRP D + +VLG +S E+ L + + +L
Sbjct: 125 IVSCVESLGSKDFCRIGIGIGRPDSRDRETVSGYVLGKMTSHEKDTLKMESLPEVLAALE 184
Query: 171 LL 172
L
Sbjct: 185 KL 186
>gi|242220553|ref|XP_002476041.1| predicted protein [Postia placenta Mad-698-R]
gi|220724729|gb|EED78752.1| predicted protein [Postia placenta Mad-698-R]
Length = 184
Score = 148 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK----FHAEISEGQLDGLRTI 57
F++AGLGN Y RH++G + +D + + + A ++ +
Sbjct: 3 FLLAGLGN--SPYPLTRHSVGHLIVDSLATRLGISLRADRSTRGLLATKADVDIGSQIVT 60
Query: 58 LI--KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL 115
L KP+ MN+SG+ + + M F + E VIHD L ++ K GG GHNG+
Sbjct: 61 LTLYKPKALMNISGKPVADAMRFLSVSPSETI-VIHDSLSHKPMSMSPKFGGSANGHNGV 119
Query: 116 KSISEKCGK--NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERY 156
+SI G ++ RLR GIGR D + R+VLG S ER
Sbjct: 120 RSIVSALGNNMDFHRLRAGIGR--DESDAARYVLGPLSPAERE 160
>gi|325973181|ref|YP_004250245.1| peptidyl-tRNA hydrolase [Mycoplasma suis str. Illinois]
gi|323651783|gb|ADX97865.1| peptidyl-tRNA hydrolase [Mycoplasma suis str. Illinois]
Length = 194
Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQ-LDGLRTILI 59
M ++ LGNPG EY RHN+GF +D+ HS H ++ ++IS+G L+G + IL
Sbjct: 3 MKVIIALGNPGKEYENTRHNVGFHILDKFHSLHNCSPFENFLGSQISKGNFLNGNKFILC 62
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRL-KTGGGDAGHNGLKSI 118
KP FMN SG++ +++ +F KL ++ N L+I+D+LD+ G+ L K HNG++ +
Sbjct: 63 KPYEFMNNSGKTFIKLFHFLKL-DINNVLLIYDELDVPLGSYTLTKRKEKKISHNGVRDL 121
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHII--RHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+ ++++GI RP ++I V+ FS E + + N +
Sbjct: 122 ENFFPLDSILKIKVGI-RPQSGKNLIIKDFVMDKFSPEEEKQISSLEKNFFSIIEKFISL 180
Query: 176 EDVSFLNHIVSVRK 189
+ N I +++
Sbjct: 181 NEKEIQNPINYIKR 194
>gi|325989624|ref|YP_004249323.1| peptidyl-tRNA hydrolase (PTH) [Mycoplasma suis KI3806]
gi|323574709|emb|CBZ40365.1| Peptidyl-tRNA hydrolase (PTH) [Mycoplasma suis]
Length = 192
Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQ-LDGLRTILI 59
M ++ LGNPG EY RHN+GF +D+ HS H ++ ++IS+G L+G + IL
Sbjct: 1 MKVIIALGNPGKEYENTRHNVGFHILDKFHSLHNCSPFENFLGSQISKGNFLNGNKFILC 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRL-KTGGGDAGHNGLKSI 118
KP FMN SG++ +++ +F KL ++ N L+I+D+LD+ G+ L K HNG++ +
Sbjct: 61 KPYEFMNNSGKTFIKLFHFLKL-DINNVLLIYDELDVPLGSYTLTKRKEKKISHNGVRDL 119
Query: 119 SEKCGKN-YKRLRIGIGRPPDTAHII--RHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+ ++++GI RP ++I V+ FS E + + N +
Sbjct: 120 ENFFPLDSILKIKVGI-RPQSGKNLIIKDFVMDKFSPEEEKQISSLEKNFFSIIEKFISL 178
Query: 176 EDVSFLNHIVSVRK 189
+ N I +++
Sbjct: 179 NEKEIQNPINYIKR 192
>gi|119904150|ref|XP_001252706.1| PREDICTED: peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)-like
isoform 1 [Bos taurus]
gi|297480756|ref|XP_002691674.1| PREDICTED: peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)-like
isoform 2 [Bos taurus]
gi|296482110|gb|DAA24225.1| peptidyl-tRNA hydrolase 1 homolog-like isoform 2 [Bos taurus]
Length = 165
Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 25 CIDRIHSFHFFP-AWKK--KFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKL 81
+ ++ +W++ + A++++ L + +L++P+ MNL+G S+ + + + L
Sbjct: 3 VLGQLARRLGVAESWERDRRCAADLAQASLGDAQLVLLRPRRLMNLNGHSVAQAVELFGL 62
Query: 82 PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN-YKRLRIGIGRPPDTA 140
E ++HD+LD G + LK GG GHNG++S N RL++GIGRP
Sbjct: 63 -TAEEVYLVHDELDKPLGKVALKLGGSARGHNGVRSCMSCLNSNAMPRLQVGIGRPTHRD 121
Query: 141 HIIRHVLGNFSSPERYFLLPIIDNIAR 167
+ +VLG FS E+ L P+++
Sbjct: 122 AVQAYVLGRFSPAEQELLPPVLERAVD 148
>gi|309794295|ref|ZP_07688719.1| putative peptidyl-tRNA hydrolase [Escherichia coli MS 145-7]
gi|308122200|gb|EFO59462.1| putative peptidyl-tRNA hydrolase [Escherichia coli MS 145-7]
Length = 122
Score = 147 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KFHAEISEGQLDGLRTILIK 60
++ GL NPG EY RHN G +D + P ++ KF S L G L+
Sbjct: 4 KLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLV 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTG 106
P TFMNLSG+++ + +F+++ N + LV HD+LDL G + K G
Sbjct: 64 PTTFMNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLG 108
>gi|255728023|ref|XP_002548937.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133253|gb|EER32809.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 214
Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 56/183 (30%), Positives = 80/183 (43%), Gaps = 10/183 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+A +GNP EY RHN G ++ + H+ KK +S IL K
Sbjct: 25 LFIASIGNPEPEYQGTRHNAGHRLMNSLIEVHWKDHVYKKGDYYLSSKY---PNLILYKS 81
Query: 62 Q-TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLK-TGGGDAGHNGLKSIS 119
+ MN G+ L + YK +V+HD+L D G +++ G GHNGLKSI
Sbjct: 82 NDSLMNRQGRFLRRHIAHYKDTK---LVVLHDELQRDVGKFQIRGPGTSSRGHNGLKSID 138
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL-PIIDNIARSLPLLAKREDV 178
+ G Y +L IGIGRP + ++ +V+ F E L + AR L L E
Sbjct: 139 KHVGGKYTKLGIGIGRPQTKS-VVDYVMEEFQPQEAEILDWEVFPKCARELQKLVDEELK 197
Query: 179 SFL 181
Sbjct: 198 QMQ 200
>gi|306843117|ref|ZP_07475739.1| peptidyl-tRNA hydrolase [Brucella sp. BO2]
gi|306286722|gb|EFM58275.1| peptidyl-tRNA hydrolase [Brucella sp. BO2]
Length = 195
Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 64/134 (47%), Positives = 90/134 (67%), Gaps = 6/134 (4%)
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLK 116
+L+KPQTFMNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+K
Sbjct: 2 LLVKPQTFMNLSGQSIGEAMRFYKLTPA-DLVVIYDELDLVPGKLRIKTGGGSGGHNGIK 60
Query: 117 SISEKC-----GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPL 171
SI G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++
Sbjct: 61 SIDAHMQSFPGGQNYRRMRLGIGHPGARELVHNYVLGDFAKADNEWLDTLLGAVADNVAT 120
Query: 172 LAKREDVSFLNHIV 185
LA+RED SF+N I
Sbjct: 121 LARREDNSFMNRIA 134
>gi|308379937|ref|ZP_07488154.2| putative aminoacyl-tRNA hydrolase [Mycobacterium tuberculosis
SUMu011]
gi|308363124|gb|EFP51975.1| putative aminoacyl-tRNA hydrolase [Mycobacterium tuberculosis
SUMu011]
Length = 130
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 78/130 (60%), Gaps = 2/130 (1%)
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
+ KP+ +MN SG+ + + FY + N +VIHDDLDL+FG +RLK GGG+ GHNGL+S
Sbjct: 1 MAKPRCYMNESGRQIGPLAKFYSVAPA-NIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRS 59
Query: 118 ISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
+ G K+++R+RIGIGRPP VL NF+ ER + I + A + LL ++
Sbjct: 60 VVAALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQG 119
Query: 177 DVSFLNHIVS 186
N + +
Sbjct: 120 MEPAQNRVHA 129
>gi|156622394|emb|CAO98817.1| mitochondrial peptidyl-tRNA hydrolase [Nakaseomyces delphensis]
Length = 183
Score = 145 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 13/177 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ + G+GNP Y RHNIG +DR+ P + + G T +
Sbjct: 11 WCLTGIGNPEPRYRGTRHNIGLYVLDRLKDT-LAPGGQYTRQGCVH-VYTSGQFTFIRSD 68
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLEN---YLVIHDDLDLDFGTLRLK-TGGGDAGHNGLKS 117
++NLSG S+ ++ KL E+ ++V+HD+L L G ++L+ GHNGLKS
Sbjct: 69 IDYINLSGPSIRP--SWQKLLQNEHDTEFIVVHDELSLPLGKVQLRDHKTSHRGHNGLKS 126
Query: 118 ISEKCGKNYKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
I +K+L IGIGRP D + +VL + E + I A++L L+
Sbjct: 127 ILHHVHIPFKKLSIGIGRPQTTDPQQVADYVLSKTTDQELRSIDNSI---AKALQLI 180
>gi|314922166|gb|EFS85997.1| putative peptidyl-tRNA hydrolase [Propionibacterium acnes HL001PA1]
gi|314965249|gb|EFT09348.1| putative peptidyl-tRNA hydrolase [Propionibacterium acnes HL082PA2]
gi|314982386|gb|EFT26479.1| putative peptidyl-tRNA hydrolase [Propionibacterium acnes HL110PA3]
gi|315094009|gb|EFT65985.1| putative peptidyl-tRNA hydrolase [Propionibacterium acnes HL060PA1]
gi|327329539|gb|EGE71299.1| aminoacyl-tRNA hydrolase [Propionibacterium acnes HL103PA1]
Length = 136
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 46/137 (33%), Positives = 75/137 (54%), Gaps = 2/137 (1%)
Query: 51 LDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
+D IL++ +T+MN SG ++ +V +F + ++ +V+HD++DLD G LRLK GGGD
Sbjct: 1 MDAQTVILMRSRTYMNESGIAVSKVASFAGMTP-DHLIVVHDEIDLDPGRLRLKKGGGDN 59
Query: 111 GHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
GHNGLKS+ ++ R+R+G+GRPP VL +R + + A ++
Sbjct: 60 GHNGLKSVRAHMRTGDFIRVRVGVGRPPGRQDPADWVLARVPVRQRTDMDVQVALAADAV 119
Query: 170 PLLAKREDVSFLNHIVS 186
+ K+ N S
Sbjct: 120 ETIIKQGLTVAQNRFNS 136
>gi|149247454|ref|XP_001528139.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448093|gb|EDK42481.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 224
Score = 144 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK---KFHAEISEGQLDGLRTILI 59
+A +GNP Y RHN+G +D I + + WK K + +L
Sbjct: 42 FIASIGNPEPSYAGTRHNVGHRVMDHITNNY----WKDHVYKQGPFYLSTKYPN--IVLF 95
Query: 60 KPQ-TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGG-GDAGHNGLKS 117
K TFMN+ G+ + + +F + P LV+HD+L+ G +L+ G GHNGLKS
Sbjct: 96 KSDSTFMNIQGRVIQK--HFNQHPKGSQMLVLHDELERPLGKFQLRQAGTSSRGHNGLKS 153
Query: 118 ISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSP-ERYFLL-PIIDNIARSLPLLAK 174
I C K+Y++L IGIG+P + + +VL F S E L +I + + L + +
Sbjct: 154 IDGFC-KSYQKLGIGIGKPT-SGSVSDYVLKKFDSQIEIEELDLKVIPKVIKKLEEVIE 210
>gi|260591410|ref|ZP_05856868.1| aminoacyl-tRNA hydrolase [Prevotella veroralis F0319]
gi|260536602|gb|EEX19219.1| aminoacyl-tRNA hydrolase [Prevotella veroralis F0319]
Length = 165
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 55/166 (33%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
M +D ++ K + I+E + G + IL+KP TFMNLSG ++ +N +
Sbjct: 1 MVLDAFAKASNI-VFEDKRYGFIAETTIKGRKIILLKPTTFMNLSGNAVRYWLNKENIDQ 59
Query: 84 LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHII 143
LVI DD+ L G RLK G + GHNGL I + G+NY RLR+G+G I
Sbjct: 60 -SRLLVISDDVALPLGAFRLKGNGSNGGHNGLGHIQQLIGQNYARLRMGVGNDYPRGGQI 118
Query: 144 RHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVSVRK 189
VLG++S E L P ID + +N + K
Sbjct: 119 DWVLGHYSEDEMKVLQPAIDLGVDIIKSFVLAGIDITMNQFNKLGK 164
>gi|315179411|gb|ADT86325.1| peptidyl-tRNA hydrolase [Vibrio furnissii NCTC 11218]
Length = 147
Score = 143 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF-FPAWKKKFHAEISEGQLDGLRTILIK 60
++ GL NPG EY + RHN G ++ + H + KF ++G L+
Sbjct: 6 KLLVGLANPGPEYAKTRHNAGAWVVEELARIHNVVLKNEPKFFGLTGRIMVNGDDLRLLI 65
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKT 105
P TFMNLSG+++ + FY++ N E +V HD+LDL G + K
Sbjct: 66 PTTFMNLSGKAVGALAKFYQI-NPEEIMVAHDELDLPPGVAKFKK 109
>gi|114330910|ref|YP_747132.1| peptidyl-tRNA hydrolase [Nitrosomonas eutropha C91]
gi|114307924|gb|ABI59167.1| peptidyl-tRNA hydrolase [Nitrosomonas eutropha C91]
Length = 630
Score = 143 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 3/165 (1%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQT 63
+ GLGNPG E+ HNIG+ +D++ + W+ + + + L+G+ +L K
Sbjct: 448 IVGLGNPGKEFENTLHNIGYSVLDKLAVDYGG-IWQNEEEGQTAWIILNGVSVVLFKSDA 506
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG 123
+MN +G L + E+ L+I+DD+D++FGT++ K GGD GH GL+S +
Sbjct: 507 YMNKTGLRLKHYLARTGRLP-EHCLLIYDDMDIEFGTIKFKPDGGDGGHLGLRSCLKSLR 565
Query: 124 -KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
RLR G+ P +TA VL F+ E L I+D
Sbjct: 566 IYTLPRLRCGVRSPGNTAKAKEQVLAKFNKKELEQLPQILDQAVD 610
>gi|255716448|ref|XP_002554505.1| KLTH0F06930p [Lachancea thermotolerans]
gi|238935888|emb|CAR24068.1| KLTH0F06930p [Lachancea thermotolerans]
Length = 193
Score = 143 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 13/184 (7%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK---KFHAEISEGQLDGLRTILI 59
+ G+GNP +Y +RHN G + +D + + ++ + Q+D R +L+
Sbjct: 16 CITGIGNPEPQYAMSRHNAGLLMLDLLKQQLQPERKAYVPCNANPKVKKCQID--RLLLL 73
Query: 60 KPQ-TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLK-TGGGDAGHNGLKS 117
+ ++NLSG++++ + ++KL + ++V+HD+L L G ++L+ G GHNGLK
Sbjct: 74 RADGDYINLSGRTVVPL--WHKLGSNVKHVVVHDELSLPVGKVQLRNPGASVRGHNGLKD 131
Query: 118 ISEKCGKNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
I + G + RL IGIGRP D + +VL F E + D++ +L LL K
Sbjct: 132 IKTRYGDAFYRLAIGIGRPDDRDPNVVANYVLSRFPPHELAVIES--DSLVLALRLLQKA 189
Query: 176 EDVS 179
+
Sbjct: 190 GLSA 193
>gi|269219242|ref|ZP_06163096.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269211389|gb|EEZ77729.1| aminoacyl-tRNA hydrolase [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 168
Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISE----GQLDGLRTILIKPQTFMNLSGQSLLEVMNFY 79
M ID + S + K + G R +L +MN SG + ++ ++
Sbjct: 1 MVIDELASRARGKLSRLKNTGALGLECHVGPPPSRRAVLSVTTRYMNESGGPVAALLGYF 60
Query: 80 KLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-KNYKRLRIGIGRPPD 138
K+ +N +VIHD+LDL FGT+RLK GGG+ GHNGLKSI++ G K Y RLR GIGRPP
Sbjct: 61 KIAP-QNLIVIHDELDLPFGTIRLKRGGGEGGHNGLKSITQALGTKEYIRLRFGIGRPPG 119
Query: 139 TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVS 186
VL F+S + L +I A ++ + + + +
Sbjct: 120 RQDPADFVLSPFASSQTKELPLLISEAADAVEDVVLSGLEAAQLRLHT 167
>gi|241949511|ref|XP_002417478.1| peptidyl-tRNA hydrolase, putative [Candida dubliniensis CD36]
gi|223640816|emb|CAX45131.1| peptidyl-tRNA hydrolase, putative [Candida dubliniensis CD36]
Length = 210
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 7/178 (3%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+A +GNP +Y RHN G ++++ ++ KK +S +L K
Sbjct: 24 LFIASIGNPEPQYANTRHNAGHRLMNQLIDVYWKDHLYKKGLYYLSTKY---PNLVLFKS 80
Query: 62 Q-TFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRL-KTGGGDAGHNGLKSIS 119
+ MNL G + + +++HD+L + G ++ K G GHNGLKSI
Sbjct: 81 NDSLMNLQGLPISKHFTKQGYGKSA-LVILHDELQIHLGKYQIRKPGTSSRGHNGLKSID 139
Query: 120 EKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL-PIIDNIARSLPLLAKRE 176
+ Y + IGIGRPP + ++++VL FS + + ++ + L + ++
Sbjct: 140 KYLKNKYFKFGIGIGRPPASQSVVQYVLNEFSVEDLKVIDWKVLPKCVKDLENMVIQD 197
>gi|312221149|emb|CBY01090.1| similar to peptidyl-tRNA hydrolase 2 [Leptosphaeria maculans]
Length = 328
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 82/206 (39%), Gaps = 31/206 (15%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL---------- 51
++A +GNPG Y H+ G + + + + + K F IS+
Sbjct: 122 LLIASIGNPGPTYSNTLHSAGHIVTSHLATKKNYRPFTKGFSGLISQPDTSHYSFSVIGG 181
Query: 52 ------------DGLRTILIKPQTFMNLSGQSLLEVMNFYKLP-----NLENYLVIHDDL 94
+ + + MN+SG +L + +V+HD+L
Sbjct: 182 YTKVRDGAAPPPEDEDWTFWQSTSLMNISGIALKRAYTQWVQTKSLKREEARLVVVHDEL 241
Query: 95 DLDFGTLRLKTG-GGDAGHNGLKSISEKCGK-NYKRLRIGIGRPPDTAH--IIRHVLGNF 150
+ + G + +K G GHNG+KS ++ G + R+ +GIGRP + R+VLG
Sbjct: 242 ESELGKVTVKLGAASAKGHNGIKSCQQQLGSMKWWRVGVGIGRPESRDPQVVSRYVLGKM 301
Query: 151 SSPERYFLLPIIDNIARSLPLLAKRE 176
S +R L + +L +A E
Sbjct: 302 SGGQRKALEGSALAVFEALEAIASGE 327
>gi|322708497|gb|EFZ00075.1| mitochondrial peptidyl-tRNA hydrolase [Metarhizium anisopliae ARSEF
23]
Length = 198
Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F+V LGNP +Y + H+ G ++ + P +++ + G + L++
Sbjct: 6 FLVISLGNPLPKYE-SLHSAGHFALNGLAKALRHPPFREVKFGRQTCLVSQGPKYTLVQS 64
Query: 62 QTFMNLSGQSLLEVMN---FYKLPNLENYLVIHDDLDLDFGTLRLKTG-GGDAGHNGLKS 117
T MN+SG + +V P+ + +++HD+L+ FG +RL GHNGLKS
Sbjct: 65 PTLMNISGPFVAKVWQEIVRQHDPSSTSLVIVHDELEKAFGDVRLTPWDRSHRGHNGLKS 124
Query: 118 ISEKCGKN------YKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPI--IDNIAR 167
+ + ++ + R+ IGIGRP + + ++VL + +R L +D R
Sbjct: 125 VKKSLLQDKFPESPFARIAIGIGRPAERDAATVSKYVLDKITVEQRRVLEEAVPLDVAKR 184
Query: 168 SLPL 171
+ L
Sbjct: 185 LVEL 188
>gi|114626797|ref|XP_001150783.1| PREDICTED: similar to Peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae) isoform 3 [Pan troglodytes]
Length = 165
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 25 CIDRIHSFHFFP-AWKKKFH--AEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKL 81
+ ++ +W + H A+++ L + +L++P+ MN +G+S+ + L
Sbjct: 3 VLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVLLRPRRLMNANGRSVARAAELFGL 62
Query: 82 PNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN-YKRLRIGIGRPPDTA 140
E ++HD+LD G L LK GG GHNG++S N RLR+GIGRP
Sbjct: 63 -TAEEVYLVHDELDKPLGRLALKLGGSARGHNGVRSCISCLNSNAMPRLRVGIGRPAHPE 121
Query: 141 HIIRHVLGNFSSPERYFLLPIIDNIAR 167
+ HVLG FS E+ L ++D
Sbjct: 122 AVQAHVLGCFSPAEQELLPLLLDRATD 148
>gi|302680080|ref|XP_003029722.1| hypothetical protein SCHCODRAFT_16804 [Schizophyllum commune H4-8]
gi|300103412|gb|EFI94819.1| hypothetical protein SCHCODRAFT_16804 [Schizophyllum commune H4-8]
Length = 188
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 12/181 (6%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL----DGLRTI 57
+AGLG+ H RH++G + +D + + + + + G++ +
Sbjct: 9 LFIAGLGSMTHP--ATRHSVGQIIVDGLAARLGIRV-ESCRNGFVGTGRMSLGDNTGMVT 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
L K + MNLSG ++ M + + E +V+ D LD + +L +K GG GHNG+KS
Sbjct: 66 LYKTKFPMNLSGPPIVAKMQELNMRDPERLIVVQDSLDHEPLSLSVKKGGSANGHNGVKS 125
Query: 118 ISEKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER-YFLLPIIDNIARSLPLLAK 174
G N+ RLR GIGR I +VLG S+ ER Y+ ID + ++ +A+
Sbjct: 126 TIAALGGKSNFWRLRAGIGR--SGGDIPNYVLGRLSNHERTYWREEGIDEVIAAIERIAE 183
Query: 175 R 175
+
Sbjct: 184 K 184
>gi|257894169|ref|ZP_05673822.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,408]
gi|257830548|gb|EEV57155.1| peptidyl-tRNA hydrolase [Enterococcus faecium 1,231,408]
Length = 122
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK 124
MN SG+++ +M ++ + E +VI+DDLDL G +RL+ G GHNG+KSI
Sbjct: 1 MNESGRAVGPLMTYFGIYP-EELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIISHLNT 59
Query: 125 N-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE-DVSFLN 182
N + R+++GIGRP +++HVL FS + + + +++ L + V +N
Sbjct: 60 NVFDRIKVGIGRPEGKKTVVQHVLSPFSKENQPLIEESMCQSVKAVEYLIEGHSFVDAMN 119
Query: 183 HIV 185
Sbjct: 120 RFN 122
>gi|261749651|ref|YP_003257337.1| peptidyl-tRNA hydrolase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497744|gb|ACX84194.1| peptidyl-tRNA hydrolase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 198
Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 67/186 (36%), Positives = 99/186 (53%), Gaps = 3/186 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F++ GLGNPG Y + RHN+GF+ +D+I +F KK IS+ +KP
Sbjct: 10 FLITGLGNPGFLYQKTRHNLGFLILDKISEKYFLSFSIKKL-GFISKLIYKEKLLFFLKP 68
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
T++N SG+S+ MN K+ LEN LVI DD+ L+FG +RL+ GGD GHNGLKSI ++
Sbjct: 69 STYVNESGKSVKYWMNKKKIA-LENILVISDDIYLNFGNIRLRGKGGDGGHNGLKSIEKE 127
Query: 122 CGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
G + Y R+R GI + I +VLGN+ E L ++ +
Sbjct: 128 LGTSHYARMRFGIKNHFYQDNKIDYVLGNWKEEELKNLFNRLEISVEIIFSFVLNGLQKT 187
Query: 181 LNHIVS 186
++ +
Sbjct: 188 MDFFNN 193
>gi|147791610|emb|CAN77398.1| hypothetical protein VITISV_043931 [Vitis vinifera]
Length = 301
Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 47/164 (28%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++ GLGNPG++Y E RHNI +C+ S G + + +L KP
Sbjct: 52 WLIVGLGNPGNKYHETRHNI--ICV-------------------TSTGSIGEVPILLAKP 90
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG------L 115
Q +MN SG+S+ +D+++L G LRL GG HNG L
Sbjct: 91 QAYMNFSGESV------------------YDEMNLPNGVLRLAPRGGHGYHNGYIYNNTL 132
Query: 116 KSISEKCG--KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYF 157
K++ + + RL IGIG PP T + ++L FS ER
Sbjct: 133 KNVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQKFSFEERKQ 176
>gi|302205840|gb|ADL10182.1| Peptidyl-tRNA hydrolase [Corynebacterium pseudotuberculosis C231]
Length = 135
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 47/129 (36%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 47 SEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTG 106
+E ++ + IL P+ FMNLSG + + NF+ +P +V+ DDL+L+F ++ K G
Sbjct: 3 AETRIGNTKVILATPRCFMNLSGGPVRSIANFFNIPP-SRVIVLFDDLELNFSEVKAKIG 61
Query: 107 GGDAGHNGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNI 165
GGD GHNGL+S+++ G K+Y R+ IGIGRPP VL FS E + +
Sbjct: 62 GGDHGHNGLRSVTQSLGTKDYFRVGIGIGRPPGRMEPKTFVLKPFSKKELLEIPIACADA 121
Query: 166 ARSLPLLAK 174
A + +
Sbjct: 122 ADEVERIIT 130
>gi|290998726|ref|XP_002681931.1| predicted protein [Naegleria gruberi]
gi|284095557|gb|EFC49187.1| predicted protein [Naegleria gruberi]
Length = 270
Score = 140 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 96/257 (37%), Gaps = 81/257 (31%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDR------------------IHSFHFFPAW----- 38
++ GLGNPG +Y RHNIG+M ++ + W
Sbjct: 9 LVLIGLGNPGDKYKLTRHNIGWMIVNEFIKEYSFPALRESNNDAMLSQRENVSFWTPSEL 68
Query: 39 ------------------KKKF-----------------HAEISEGQLDGL--------- 54
+KK +A+I QL+
Sbjct: 69 RRSFVEKEIQRLRSKWYHEKKRELGANFDENNIQYPNFGNADIGMKQLEDRVKNIIAYPT 128
Query: 55 -RTILIKPQTFMNLSGQSLLEV--MNFYKLPNLEN---YLVIHDDLDLDFGTLRLKTGGG 108
+ P +FMNLSG + + MN K+ LE+ LVI DD+ FGT +LK G
Sbjct: 129 LDVHCMLPLSFMNLSGGPVKKYLDMNGMKINQLEDVNRILVITDDVSQPFGTFKLKAKGT 188
Query: 109 DAGHNGLKSISEKCGKN-YKRLRIGIG--RPPD-----TAHIIRHVLGNFSSPERYFLLP 160
GHNGL+ I K G + Y RL++GI + PD + VLGNF+ E+ L
Sbjct: 189 HGGHNGLRDIEAKLGTDKYHRLKVGIAPLKNPDMAKQAGQDLASFVLGNFTHEEQKDLPK 248
Query: 161 IIDNIARSLPLLAKRED 177
++ L +
Sbjct: 249 VVSRGVEILKDYISFDF 265
>gi|46110423|ref|XP_382269.1| hypothetical protein FG02093.1 [Gibberella zeae PH-1]
Length = 202
Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F+V LGNP +Y ++ H+ G ++ + + P++++K S G + L++
Sbjct: 6 FLVVSLGNPLPKY-QSLHSAGHFALNGLANVLRNPSFQEKTFGGQSCLVSQGPKYTLVQS 64
Query: 62 QTFMNLSGQSLLEVMN---FYKLPNLENYLVIHDDLDLDFGTLRLKTG-GGDAGHNGLKS 117
T MN+SG+ + N + P+ + +++HD+L+ G + L+ GHNG+K
Sbjct: 65 PTLMNISGRFVARAWNDMIKQQDPSSLSLIIVHDELEAKKGAVSLRAWDRSPRGHNGIKD 124
Query: 118 ISEKCGKN------YKRLRIGIGRPPDTAH----IIRHVLGNFSSPERYFLLP 160
+ K ++ + R+ +GIGRP D + +VL S+ ER
Sbjct: 125 VKNKLSQDKYPTSPFVRIAVGIGRPSDGERDRNTVSDYVLNRISNEERRIFEE 177
>gi|117623422|ref|YP_852335.1| peptidyl-tRNA hydrolase [Escherichia coli APEC O1]
gi|115512546|gb|ABJ00621.1| peptidyl-tRNA hydrolase [Escherichia coli APEC O1]
Length = 127
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK 124
MNLSG+++ + +F+++ N + LV HD+LDL G + K GGG GHNGLK I K G
Sbjct: 1 MNLSGKAVAAMASFFRI-NPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGN 59
Query: 125 N--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
N + RLRIGIG P D ++ VLG E+ + ID AR + N
Sbjct: 60 NPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLTKATN 119
Query: 183 HIVSVR 188
+ + +
Sbjct: 120 RLHAFK 125
>gi|281204723|gb|EFA78918.1| Peptidyl-tRNA hydrolase [Polysphondylium pallidum PN500]
Length = 369
Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
IL KP FMNLSG S+ + N Y +P + N L++ DD+ +D G ++L+T GG G NG
Sbjct: 238 EVILAKPMKFMNLSGGSVRSLHNHYNVP-IGNILIMVDDMAVDLGKVKLRTKGGSGGQNG 296
Query: 115 LKSISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
L+ I + G + RLRIGIG P I +VL F + I ++ AR +
Sbjct: 297 LEDIINRLGTEKFARLRIGIGSPRPGEDIASYVLRKFPLESVQQISMITEHAARVALMWL 356
Query: 174 KREDVSFLNHIV 185
+ + V +NH+
Sbjct: 357 ECDTVFTMNHVN 368
Score = 73.9 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG 49
++V GLGNPG EY RHNIGF+ ID++ H+ I+
Sbjct: 126 YLVVGLGNPGKEYQFTRHNIGFLAIDKLAQLLGTDINNDVKHSHITTT 173
>gi|169612189|ref|XP_001799512.1| hypothetical protein SNOG_09213 [Phaeosphaeria nodorum SN15]
gi|111062285|gb|EAT83405.1| hypothetical protein SNOG_09213 [Phaeosphaeria nodorum SN15]
Length = 316
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 33/208 (15%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG------------ 49
+V +GNPG Y H+ G + + + + K ++S
Sbjct: 108 LLVCSIGNPGSTYANTLHSAGHILTSYLAVHKSYKPFTKGLAGQVSTPDTSGMSFGIFSG 167
Query: 50 --QLDGLRTILIKPQTF------MNLSGQSLLEVMN--------FYKLPNLE-NYLVIHD 92
+ DG + + TF MN+SG+ + N Y P +E +V+HD
Sbjct: 168 FQRTDGAPITVAQDWTFWQSTSLMNVSGKGVGRAYNEWLKDVKRKYGDPAIEGRLVVVHD 227
Query: 93 DLDLDFGTLRLKTGG-GDAGHNGLKSISEKCGK-NYKRLRIGIGRPPDTAH--IIRHVLG 148
+L+ G + ++ G GHNGLKS GK + R+ +GIGRP + ++VL
Sbjct: 228 ELESQLGKVTVRDGTASAKGHNGLKSCQASLGKTKWWRVGVGIGRPDSREPDVVAKYVLK 287
Query: 149 NFSSPERYFLLPIIDNIARSLPLLAKRE 176
S E+ L + ++L +A +
Sbjct: 288 KMSPREKSALENSAVGVFKALEEIAAGQ 315
>gi|325181965|emb|CCA16419.1| peptidyltRNA hydrolase putative [Albugo laibachii Nc14]
Length = 306
Score = 138 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 56/238 (23%), Positives = 96/238 (40%), Gaps = 59/238 (24%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK-------------------- 41
++ GLGNP +Y + RHNIG + H + +
Sbjct: 46 KVLVGLGNPTEKYVDTRHNIGKRALTHFLKSHVSSSVNRSLQMLHDPSVHGDVIQAAIGY 105
Query: 42 ------------FHAEISEGQLD-------GLRTILIKPQTFMNLSGQSLLEVMNFYK-- 80
F +E S + ++ L+ P T+MN SG+S+ ++ ++
Sbjct: 106 TAEDSAGYDLVDFFSERSRAKTAATGVPHPTVQLTLLAPTTYMNASGKSVRGFLSHHRWR 165
Query: 81 -------LPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN-YKRLRIG 132
L + LV+ D++ L FGT+RLK+ G G NG+K + + G + + RL+IG
Sbjct: 166 LKRNPLSLNFQDEMLVLSDEVSLPFGTIRLKSRGSSGGQNGVKDVIQCVGTDRFARLKIG 225
Query: 133 IGR----------PPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
+G PP + ++VL F+S E+ L ++ I L + R
Sbjct: 226 VGASQWFTNGNTGPPSHFPLDKYVLSRFNSSEQDRLGDLLKYIQEVLRVYLHRGLQQA 283
>gi|289619118|emb|CBI54386.1| unnamed protein product [Sordaria macrospora]
Length = 199
Score = 138 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID----RIHSFHFFPAWKKKFHAEISEGQLDGLRTI 57
F+V LGNPG EY + H+ G M ++ ++ P++ + + + + G +
Sbjct: 7 FLVVSLGNPG-EYRDTYHSAGHMVLESFQKKLPEALGQPSFTSERYGKKAVRTSAGSKYT 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKL-----PNLENYLVIHDDLDLDFGTLRLK-TGGGDAG 111
L++ T MN++G L + + P +++HDDL+ + G ++++ G
Sbjct: 66 LLQSPTLMNITGPWLARAYKDFMVDQGLSPEEVGLVLVHDDLEEELGVVKVRQWKASHRG 125
Query: 112 HNGLKSISEKC----GKNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLP 160
HNG+KS+ + R+ IGIGRP D + VL + L
Sbjct: 126 HNGIKSVLASLPPMPDAKWARVSIGIGRPEDRDRTTVSDFVLSKVPRHAKGILQD 180
>gi|322696566|gb|EFY88356.1| mitochondrial peptidyl-tRNA hydrolase [Metarhizium acridum CQMa
102]
Length = 198
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F+V LGNP +Y + H+ G ++ + P +++ + + G + L++
Sbjct: 6 FLVVSLGNPLPKYE-SLHSAGHFALNGLVKALRQPPFREVKLGKQTCLVSQGPKYTLVQS 64
Query: 62 QTFMNLSGQSLLEVMN---FYKLPNLENYLVIHDDLDLDFGTLRLKTG-GGDAGHNGLKS 117
T MN+SG + + + + +++HD+L+ FG +RL GHNGLKS
Sbjct: 65 PTLMNISGPFVAKAWQEIVRQHDASSTSLVIVHDELEKAFGDVRLTPWDRSHRGHNGLKS 124
Query: 118 ISEKCGKN------YKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPII 162
+ + ++ + R+ IGIGRP + + ++VL + +R L +
Sbjct: 125 VKKSLLQDKFPESPFARIAIGIGRPAERDAATVSKYVLDKITVEQRRVLEEAV 177
>gi|330932252|ref|XP_003303710.1| hypothetical protein PTT_16032 [Pyrenophora teres f. teres 0-1]
gi|311320132|gb|EFQ88208.1| hypothetical protein PTT_16032 [Pyrenophora teres f. teres 0-1]
Length = 385
Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 31/206 (15%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE-------GQLDGL 54
+VA +GNPG Y H+ G + + + + + K ++S G
Sbjct: 179 LLVASIGNPGATYSNTLHSAGHIVTSALSTAKSYAPFTKGLSGQVSRPPPTHLAFSFTGF 238
Query: 55 RTI-----------LIKPQTFMNLSGQSLLEVMNFY--KLPNLE-------NYLVIHDDL 94
R + + + MN+SG + + N + + +V+HD+L
Sbjct: 239 RHVPTEHDATQDWTFWQSTSLMNVSGTGVKKAYNEWLRGIRQASGSNTLEGRLVVVHDEL 298
Query: 95 DLDFGTLRLKTGG-GDAGHNGLKSISEKCGK-NYKRLRIGIGRPPDTAH--IIRHVLGNF 150
+ G + ++ GG GHNG+KS ++ G + R+ +GIGRP + ++VLG
Sbjct: 299 ESALGKITIRDGGASAKGHNGIKSCQQQLGGIKWWRVGVGIGRPESRDPNVVSKYVLGKM 358
Query: 151 SSPERYFLLPIIDNIARSLPLLAKRE 176
+S +R L + R+L +A+ +
Sbjct: 359 TSFQRGALEKCTVPVYRALEEIAEGK 384
>gi|146283516|ref|YP_001173669.1| peptidyl-tRNA hydrolase [Pseudomonas stutzeri A1501]
gi|145571721|gb|ABP80827.1| peptidyl-tRNA hydrolase [Pseudomonas stutzeri A1501]
Length = 126
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK 124
MN SGQ++ + F+++P E+ LV HD+LD+ G +LK GGG GHNGL+ I K G
Sbjct: 1 MNRSGQAVAALAGFFRIPP-ESILVAHDELDMPPGVAKLKQGGGHGGHNGLRDIIAKLGN 59
Query: 125 N--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
+ RLR+GIG P + + +VLG ER L ID +P + + +
Sbjct: 60 QNSFHRLRLGIGHPGHASLVSGYVLGRAPQAEREKLDASIDFALDVVPEILTGDWTRAMQ 119
Query: 183 HIVSVR 188
+ S +
Sbjct: 120 RLHSQK 125
>gi|310790371|gb|EFQ25904.1| peptidyl-tRNA hydrolase [Glomerella graminicola M1.001]
Length = 200
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 18/197 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP---AWKKKFHAEISEGQLDGLRTIL 58
F++ LGNP Y H+ G ++ + + +F + G + +
Sbjct: 6 FLLISLGNPEP-YYNTLHSAGHHALNHLQKLLGPSQPAFHRGRFGGSPCLASI-GPKYAM 63
Query: 59 IKPQTFMNLSGQSLLEVMNFY---KLPNLENYLVIHDDLDLDFGTLRL-KTGGGDAGHNG 114
I+ MN+SG+ + + + P + L++HDDL+ + G ++ K GHNG
Sbjct: 64 IQSPAVMNVSGKWVAKAWKETLGSRDPTDLSLLLVHDDLEEELGVVKTRKWKSSHRGHNG 123
Query: 115 LKSISEKC------GKNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLP-IIDNI 165
+KS++ G + R+ IGIGRP + + +VL S +R +
Sbjct: 124 VKSVNACLRQADYPGSEWARICIGIGRPEEREKATVSNYVLKPMSRQQRSAIEDNAGPGA 183
Query: 166 ARSLPLLAKREDVSFLN 182
L +R + N
Sbjct: 184 YECLLAWEERLAAAAGN 200
>gi|294671342|ref|ZP_06736193.1| hypothetical protein NEIELOOT_03051 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291306974|gb|EFE48217.1| hypothetical protein NEIELOOT_03051 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 129
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
+KP T+MNLSG+++ + FYK+ E LV HD+LD+ G +R K GGG+ GHNGLK I
Sbjct: 1 MKPDTYMNLSGKAVAALAQFYKIRP-EEILVAHDELDIPCGQIRFKLGGGNGGHNGLKDI 59
Query: 119 SEKCGK-NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRED 177
K G ++ RLR+GIG P D ++ +VL S+ +R + I+ + LPL+ +
Sbjct: 60 QAKFGTPDFYRLRLGIGHPGDRNLVVGYVLNKPSAEDRALIDKAIEKSLQGLPLIMAGDR 119
Query: 178 VSF 180
+
Sbjct: 120 EAA 122
>gi|289829005|ref|ZP_06546705.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
Length = 149
Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 51/132 (38%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 29 IHSFHFFPAWKK-KFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENY 87
+ P ++ KF S L+G L+ P TFMNLSG+++ + +FY++ +
Sbjct: 18 LAERLRAPLREEPKFFGYTSRITLEGEDVRLLVPTTFMNLSGKAVGAMASFYRI-QPDEI 76
Query: 88 LVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK--NYKRLRIGIGRPPDTAHIIRH 145
LV HD+LDL G + K GGG GHNGLK I K G N+ RLR+GIG P D ++
Sbjct: 77 LVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGF 136
Query: 146 VLGNFSSPERYF 157
VLG E
Sbjct: 137 VLGKPPVSETKI 148
>gi|156051272|ref|XP_001591597.1| hypothetical protein SS1G_07043 [Sclerotinia sclerotiorum 1980]
gi|154704821|gb|EDO04560.1| hypothetical protein SS1G_07043 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 333
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 18/184 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW---KKKFHAEISEGQLDGLRTIL 58
++ +GNP Y H+ G + + S P + + + +S G + L
Sbjct: 152 LLICSIGNP-APYTNTLHSAGHTILTLLSSTLSQPNFIKSRSHGNGLLSPGPI----YTL 206
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLEN------YLVIHDDLDLDFGTLRLKTGG-GDAG 111
K + MN+SG + + + + +VIHD+++L G + +K G G
Sbjct: 207 WKSSSLMNISGTGVNAAWTTFLRESASSAAAECKLVVIHDEMELAPGKINVKPGSNSPKG 266
Query: 112 HNGLKSISEKC-GKNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARS 168
HNGLKSI + G+ Y R+ IGIGRP + +VL S+ E+ + + +
Sbjct: 267 HNGLKSIRDSLRGQPYTRIGIGIGRPESRDPRVVAGYVLRKMSAEEKRKIEGCVGKVVEE 326
Query: 169 LPLL 172
L L
Sbjct: 327 LARL 330
>gi|45198963|ref|NP_985992.1| AFR445Cp [Ashbya gossypii ATCC 10895]
gi|44985038|gb|AAS53816.1| AFR445Cp [Ashbya gossypii ATCC 10895]
Length = 199
Score = 134 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 73/168 (43%), Gaps = 13/168 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-----FFPAWKKKFHAEISEGQLDGLRT 56
+ GLGNP +Y RHN G + +D + + + + P + A L
Sbjct: 17 LCLTGLGNPEPQYRNTRHNAGLILLDLLKAHYAPGKPWMPCTVPRVAASYCHASRHDL-L 75
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLK-TGGGDAGHNGL 115
+L FMN SGQ+++ + +V+HD+L L G ++L+ G GHNGL
Sbjct: 76 LLRSDGAFMNRSGQNVVPLWQRIGGATR---VVVHDELSLPLGKVQLRAPGRSPRGHNGL 132
Query: 116 KSISEKCGK-NYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLP 160
KSI + Y L +GI RP I +VL FS E L
Sbjct: 133 KSIIAAGAQGTYYSLAVGIDRPETRKPAAIADYVLSRFSRAELSQLEQ 180
>gi|306837765|ref|ZP_07470631.1| peptidyl-tRNA hydrolase [Brucella sp. NF 2653]
gi|306407150|gb|EFM63363.1| peptidyl-tRNA hydrolase [Brucella sp. NF 2653]
Length = 186
Score = 133 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 58/126 (46%), Positives = 83/126 (65%), Gaps = 6/126 (4%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC-- 122
MNLSGQS+ E M FYKL + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 1 MNLSGQSIGEAMRFYKLTPA-DLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDAHMQS 59
Query: 123 ---GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+RED S
Sbjct: 60 FPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLLSAVADNVAMLARREDNS 119
Query: 180 FLNHIV 185
F+N I
Sbjct: 120 FMNRIA 125
>gi|302897591|ref|XP_003047674.1| hypothetical protein NECHADRAFT_50703 [Nectria haematococca mpVI
77-13-4]
gi|256728605|gb|EEU41961.1| hypothetical protein NECHADRAFT_50703 [Nectria haematococca mpVI
77-13-4]
Length = 198
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 15/189 (7%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
F+V LGNP +Y + H+ G ++ + +P++++ + + G + L++
Sbjct: 6 FLVVSLGNPLPQYE-SLHSAGHFALNGLAKVLRYPSFREVTLGKKACLVSQGPKYTLVQS 64
Query: 62 QTFMNLSGQSLLEVMN---FYKLPNLENYLVIHDDLDLDFGTLRLKTG-GGDAGHNGLKS 117
T MN+SG + P+ + +++HD+L+ D G +RL GHNG+KS
Sbjct: 65 PTLMNISGSFVARAWQDMVKQHDPSSLSLVIVHDELEKDLGIVRLTAWDRSHKGHNGIKS 124
Query: 118 ISEKCGKN------YKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARSL 169
+ + + R+ +GIGRP + + R+VL S +R L + +
Sbjct: 125 VKGSLSQGKYPDSPFVRIALGIGRPKERDPETVSRYVLDRISGEQRRILEE--EAPWKVA 182
Query: 170 PLLAKREDV 178
L + ED
Sbjct: 183 ERLVELEDE 191
>gi|254569914|ref|XP_002492067.1| One of two (see also PTH2) mitochondrially-localized peptidyl-tRNA
hydrolases [Pichia pastoris GS115]
gi|238031864|emb|CAY69787.1| One of two (see also PTH2) mitochondrially-localized peptidyl-tRNA
hydrolases [Pichia pastoris GS115]
gi|328351443|emb|CCA37842.1| peptidyl-tRNA hydrolase, PTH1 family [Pichia pastoris CBS 7435]
Length = 213
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 83/188 (44%), Gaps = 14/188 (7%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF----PAWKKKFHAEISEGQLDGLRT 56
+ ++A +GNP + RH+IG ++R+ + K KF+ + + +
Sbjct: 21 LLVLASIGNPESSFRGTRHSIGHHILNRLKQIYQADEQLTIDKNKFYYN----RREEPQV 76
Query: 57 ILIKPQTFMNLSGQSLLEVMN---FYKLPNLENYLVIHDDLDLDFGTLRLKTG-GGDAGH 112
+ + + MNLSG+ + + + +++HD+LD G + + GH
Sbjct: 77 LFYQSNSLMNLSGKPISKAFKSVHKWTDEYNPVLVILHDELDCPVGKFKTRRQMSSHRGH 136
Query: 113 NGLKSISEKCGKNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARSLP 170
NGL+SI++ G + + IGI RP + + +VL + + I +I +++
Sbjct: 137 NGLRSINQHMGGGFTTISIGIDRPESKSSNAVASYVLAKVPPHDLERIDRTIPSIQKTVE 196
Query: 171 LLAKREDV 178
+ + +
Sbjct: 197 DMKLGKLI 204
>gi|300120944|emb|CBK21186.2| unnamed protein product [Blastocystis hominis]
Length = 285
Score = 132 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 55/231 (23%), Positives = 86/231 (37%), Gaps = 53/231 (22%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA------WK----KKFHAEISEGQLD 52
++ GLGN G EY RHN+GF S + WK K + + +
Sbjct: 15 LIVGLGNMGSEYHRTRHNVGFGVCKTFASEYLPNMNSDDVEWKWRVAKSCKCSLLQTTIH 74
Query: 53 -------------------------------GLRTILIKPQTFMNLSGQSLL--EVMNFY 79
++ + P T+MN SGQS++ N Y
Sbjct: 75 FSQNSSLGLDLVDHVSDRACQKTVTNGVPFPNIQLSMSLPLTYMNNSGQSVVLFSKQNNY 134
Query: 80 KLPNL------ENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN-YKRLRIG 132
+L + L++HDD+ + FG +R GG G NG+KSI + RLR+G
Sbjct: 135 RLKAPSSKNNMDEILIVHDDISIPFGEIRFSPKGGSGGQNGVKSILKCMATEKIPRLRVG 194
Query: 133 IGRPPDTAHI---IRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSF 180
IG + R+V+G + + L +I L + R +
Sbjct: 195 IGASAGEGPMRADARYVIGRWDCTQLNILPYVIHFACEGLRVYLHRGINAA 245
>gi|295442870|ref|NP_596234.2| peptidyl-tRNA hydrolase Pth1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|259016322|sp|O74806|PTH_SCHPO RecName: Full=Probable peptidyl-tRNA hydrolase; Short=PTH
gi|254745601|emb|CAA21173.2| peptidyl-tRNA hydrolase Pth1 (predicted) [Schizosaccharomyces
pombe]
Length = 206
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
I+ GLGNPG + ++RH++G + + FP L+
Sbjct: 31 KIIYGLGNPGSAFVKSRHSLGKLMVSMYADSMAFPKN----------WPSTKENLTLVLS 80
Query: 62 QTFMNLSGQSLLEVMNFY--KLPNLENY--LVIHDDLDLDFGTLRLK-TGGGDAGHNGLK 116
++MN SG+ L ++ N + K+ L+ +V+HD+L+LD G ++L+ GG GHNG++
Sbjct: 81 TSYMNDSGKQLKKISNDFVRKVSPLDKIVYVVVHDELELDLGKVKLRLPGGSHRGHNGIR 140
Query: 117 SISEKCGKN-YKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLLPII 162
S E GK + R+ +GIGR + + +VL F+S E + I
Sbjct: 141 SCQEFLGKESFYRIGLGIGRCESRNREDVSDYVLSKFNSNEMKLIETDI 189
>gi|170092511|ref|XP_001877477.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647336|gb|EDR11580.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 184
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 13/181 (7%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK--FHAEISEGQLDGLRT--IL 58
+AGLGN H RH++G + +D + S ++ F S+ + L
Sbjct: 9 FIAGLGNISHPI--TRHSVGQLIVDALASRLGISMSSERGGFRGR-SDVLIGDTPVNLTL 65
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
K ++FMN+SG S+ + + + +VI D L L +K GG GHNG+KSI
Sbjct: 66 YKSKSFMNISGPSIAAEYRK-SVNSPSSMIVITDSLSHRVEALSVKLGGSANGHNGVKSI 124
Query: 119 SEKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPER-YFLLPIIDNIARSLPLLAKR 175
G + + R R+GIGR D +VL SS ER Y+ +D I + +A++
Sbjct: 125 ISALGGDLGFYRFRVGIGR--DDTDAATYVLQRLSSHERWYWTEDGLDLILTEIEKVARK 182
Query: 176 E 176
Sbjct: 183 N 183
>gi|189024650|ref|YP_001935418.1| Peptidyl-tRNA hydrolase [Brucella abortus S19]
gi|189020222|gb|ACD72944.1| Peptidyl-tRNA hydrolase [Brucella abortus S19]
Length = 186
Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 57/126 (45%), Positives = 83/126 (65%), Gaps = 6/126 (4%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC-- 122
MNLSGQS+ E M FYK+ + +VI+D+LDL G LR+KTGGG GHNG+KSI
Sbjct: 1 MNLSGQSIGEAMRFYKMTPA-DLVVIYDELDLVPGKLRIKTGGGSGGHNGIKSIDAHMQS 59
Query: 123 ---GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
G+NY+R+R+GIG P + +VLG+F+ + +L ++ +A ++ +LA+RED S
Sbjct: 60 FPGGQNYRRMRLGIGHPGAKELVHNYVLGDFAKADNEWLDTLMGAVADNVAMLARREDNS 119
Query: 180 FLNHIV 185
F+N I
Sbjct: 120 FMNRIA 125
>gi|85104158|ref|XP_961682.1| hypothetical protein NCU01070 [Neurospora crassa OR74A]
gi|18376205|emb|CAD21321.1| related to aminoacyl-tRNA hydrolase [Neurospora crassa]
gi|28923230|gb|EAA32446.1| predicted protein [Neurospora crassa OR74A]
Length = 228
Score = 131 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCID----RIHSFHFFPAWKKKFHAEISEGQLDGLRTI 57
F+V LGNPG EY + H+ G + ++ ++ P++ + + + + G +
Sbjct: 36 FLVVSLGNPG-EYRDTFHSAGHLVLESFQKKLPEDLGQPSFTSERYGKKAVRASAGSKYT 94
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKL-----PNLENYLVIHDDLDLDFGTLRLK-TGGGDAG 111
L++ T MN++G L Y + P +++HDDL+ + G ++++ G
Sbjct: 95 LLQSPTLMNITGPWLARAYKDYLVDHGLSPEEVGLVLVHDDLEEELGVVKVRQWKASHRG 154
Query: 112 HNGLKSISEKC----GKNYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLP 160
HNG+KS+ + R+ IGIGRP D + VL + L
Sbjct: 155 HNGIKSVLASLPPIPDAKWARVSIGIGRPDDRDRTTVSDFVLSKIPRHAKGILQD 209
>gi|171693449|ref|XP_001911649.1| hypothetical protein [Podospora anserina S mat+]
gi|170946673|emb|CAP73476.1| unnamed protein product [Podospora anserina S mat+]
Length = 198
Score = 130 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 14/172 (8%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF--FPAWKKKFHAEISEGQLDGLRTILIK 60
+V GLGNPG Y H+ G + ++ + + P++K H + S G + ++
Sbjct: 7 LVVGLGNPGEAYRNTYHSAGNIVLNALRNQMADTQPSFKVARHGKKSTEASIGPKYSFLQ 66
Query: 61 PQTFMNLSGQSLLEVMNFYKL-----PNLENYLVIHDDLDLDFGTLRLKTG-GGDAGHNG 114
MN++G + + P +++HDDL+ + G ++++ GHNG
Sbjct: 67 SPCVMNVTGTWFARAYREHLIDNGLSPAELGVVLVHDDLEEELGVVKIRDWARSHRGHNG 126
Query: 115 LKSISEKCGKN----YKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLP 160
+KS++ + + R+ IGIGRP + + +VL R L
Sbjct: 127 IKSVNASLKADPEGKWARVSIGIGRPVERERASVSDYVLSKIPRHARGILEE 178
>gi|307102711|gb|EFN50980.1| hypothetical protein CHLNCDRAFT_141630 [Chlorella variabilis]
Length = 238
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 51/82 (62%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+++V GLGNPG Y RHN+GFM +D++ + + A + G+ G + +L+K
Sbjct: 42 LWMVCGLGNPGPRYESTRHNVGFMAVDQLARQEGIAVNRLQETAVVGRGRFAGKKVLLVK 101
Query: 61 PQTFMNLSGQSLLEVMNFYKLP 82
P TFMN+SG+++ + FY++P
Sbjct: 102 PMTFMNVSGEAVGRLARFYRVP 123
>gi|50294488|ref|XP_449655.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528969|emb|CAG62631.1| unnamed protein product [Candida glabrata]
Length = 196
Score = 129 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 24/186 (12%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ G+GNP Y RHN+G +D + P + F E + +++
Sbjct: 19 LCLTGIGNPEPSYKGTRHNVGLTVLDLLIK-QLVPRDQHVFRRE--------GKVHVLRT 69
Query: 62 QT---------FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLK-TGGGDAG 111
T FMNLSG+S++ + + +Y VIHD+L L G L+L+ G
Sbjct: 70 PTITFIRSDIGFMNLSGRSVVPMWQKL-YTDHTDYAVIHDELSLRTGALQLRQPQASLRG 128
Query: 112 HNGLKSISEKCGKNYKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLLPIIDNIARSL 169
HNGL+ IS Y +L IGI RP D + +VL + ++ +++L
Sbjct: 129 HNGLRDISAHWRHQYYKLAIGIDRPESRDPQAVADYVLSKVPQRDATYIENT--TTSKAL 186
Query: 170 PLLAKR 175
LL ++
Sbjct: 187 ELLQRQ 192
>gi|213402863|ref|XP_002172204.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
gi|212000251|gb|EEB05911.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
Length = 160
Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 21/165 (12%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQ 62
++ GLGNPG ++RH++G + + + EI + ++ P
Sbjct: 6 LLIGLGNPGSVASKSRHSVGKLMLSLFAEKN-----------EIGQKWPAEHDGFVLVPS 54
Query: 63 T-FMNLSGQSLL----EVMNFYKLPNLENYL--VIHDDLDLDFGTLRLKTGGGDAGHNGL 115
T +MN SG+ + E++ Y + E L V+HDD++ G ++LK G GHNG+
Sbjct: 55 TVYMNESGKFVQRVRQEILRKYCHNDEEKLLCIVVHDDMESPLGKVKLKHGTSHRGHNGI 114
Query: 116 KSISEKCGKN-YKRLRIGIGRPPD--TAHIIRHVLGNFSSPERYF 157
KS G + R+ IGIGR + + + VLGNF E
Sbjct: 115 KSCQAFLGNEAFFRISIGIGRCESHLSKDVSKFVLGNFHQAEFET 159
>gi|315185671|gb|EFU19439.1| Aminoacyl-tRNA hydrolase [Spirochaeta thermophila DSM 6578]
Length = 164
Score = 128 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 26 IDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLE 85
++RI S H +K+K + G + G +LIKP T+MN SG ++
Sbjct: 1 MERIASTHLHAPFKEKALWAEARGTIKGREVVLIKPLTYMNRSGAIFSHLLVDRTWLPW- 59
Query: 86 NYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK-NYKRLRIGIGRPPDTAHIIR 144
+ +V+ D +DL G RL+ GGG AGHNGLKSI + G ++ R +G+GRPP+ +
Sbjct: 60 HLVVVCDQVDLTPGNGRLRIGGGHAGHNGLKSIIQHLGSPDFVRYYVGVGRPPEGEDLAD 119
Query: 145 HVLG 148
+VL
Sbjct: 120 YVLS 123
>gi|320325683|gb|EFW81744.1| peptidyl-tRNA hydrolase [Pseudomonas syringae pv. glycinea str.
B076]
Length = 126
Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 3/126 (2%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK 124
MN SGQ++ + FY++P +E+ LV HD+LDL G +LK GGG GHNGL+ I + G
Sbjct: 1 MNRSGQAVAALAGFYRIP-VESILVAHDELDLPPGVAKLKVGGGHGGHNGLRDIIAQLGN 59
Query: 125 N--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
+ RLR+GIG P D + + VLG E+ L ID LP + E +
Sbjct: 60 QNTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNRAMK 119
Query: 183 HIVSVR 188
++ S +
Sbjct: 120 NLHSQK 125
>gi|320588213|gb|EFX00688.1| peptidyl-tRNA hydrolase 2 [Grosmannia clavigera kw1407]
Length = 201
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 17/172 (9%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEIS---EGQLDGLRTILI 59
+V LGNP Y H+ G + ++ + P + + + R L
Sbjct: 8 LVVSLGNP-APYRNTLHSAGHLALEALRRELQLPPFASRRIGRQAAQVSPVSAASRYTLA 66
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLEN----YLVIHDDLDLDFGTLRLKTG-GGDAGHNG 114
+ T MN+SG + + + +V+HDDL+ G ++++ GHNG
Sbjct: 67 QSPTLMNVSGPWVARAWEEVLRGSSDATGAGLIVLHDDLEEALGVVKIRPWERSHRGHNG 126
Query: 115 LKSISEKCGKN------YKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFL 158
LKSI+ ++ + +L +GIGRP D + + +VL E+ L
Sbjct: 127 LKSINASLRRSVHPAARWAKLSVGIGRPDTRDRSSVSDYVLRPLDGHEKTVL 178
>gi|156836054|ref|XP_001642267.1| hypothetical protein Kpol_237p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156112750|gb|EDO14409.1| hypothetical protein Kpol_237p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 192
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 22/189 (11%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISE---GQLDGLRT 56
M + G+GNP +Y RHN+G I+++ +KK E E G R
Sbjct: 1 MILF-GIGNP-VKYKGTRHNVGKYIIEQLRRELCPNIEYKKGKRYEYVECDGGDTRSERL 58
Query: 57 ILIKP-QTFMNLSGQSLLEVM--NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGD-AGH 112
+L + TFMN SG S+ E + +L+ +V+HD+L+L G ++++ GG GH
Sbjct: 59 VLCRSVDTFMNHSGLSIKEYLRGRHGGAGSLQRMVVVHDELELSIGKIKMRDGGSSNRGH 118
Query: 113 NGLKSISEKCGKNYKRLRIGIGRP---------PDTAHIIRHVLGNFSSPERYFLLPIID 163
NGLKS+ + G +L IGIGRP ++ +VL S ER + +
Sbjct: 119 NGLKSVYGEVGP-VTKLGIGIGRPSRSVSAGKGGGDDDVVEYVLSEMSETERRIIRE--E 175
Query: 164 NIARSLPLL 172
+ R L LL
Sbjct: 176 TVPRVLMLL 184
>gi|307718727|ref|YP_003874259.1| peptidyl-tRNA hydrolase [Spirochaeta thermophila DSM 6192]
gi|306532452|gb|ADN01986.1| peptidyl-tRNA hydrolase [Spirochaeta thermophila DSM 6192]
Length = 164
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 26 IDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLE 85
++RI S H +K+K + G + G +LIKP T+MN SG ++
Sbjct: 1 MERIASTHLHAPFKEKALWAEARGTIKGREVVLIKPLTYMNRSGAIFSHLLVDRTWLP-R 59
Query: 86 NYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG-KNYKRLRIGIGRPPDTAHIIR 144
+ +V+ D +DL G RL+ GGG AGHNGLKSI + G ++ R +G+GRPP+ +
Sbjct: 60 HLVVVCDQVDLTPGNGRLRIGGGHAGHNGLKSIIQHLGSPHFVRYYVGVGRPPEGEDLAD 119
Query: 145 HVLG 148
+VL
Sbjct: 120 YVLS 123
>gi|66814068|ref|XP_641213.1| hypothetical protein DDB_G0280507 [Dictyostelium discoideum AX4]
gi|60469238|gb|EAL67233.1| hypothetical protein DDB_G0280507 [Dictyostelium discoideum AX4]
Length = 452
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
+ IL+KP T+MN SG L + Y +P L+N LV+ DD+ D G ++++T GG AG
Sbjct: 320 NQVILLKPMTYMNASGNPLRTIQQKYNVP-LQNILVLVDDISTDIGVIKMRTKGGSAGQK 378
Query: 114 GLKSISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G++S+ + G + R++ G+G P VL FS + + L ID +R +
Sbjct: 379 GIESVISRLGTEKFSRIKFGVGVPNAGEIRSNFVLKKFSREKEHLLKESIDKASRYSIMW 438
Query: 173 AKREDVSFLNHIV 185
++ +N I
Sbjct: 439 LEKGSDFTMNLIN 451
Score = 71.2 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 27/59 (45%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+I+ GLGNPG EY RHNIGF ID + + H+ + L + K
Sbjct: 166 YIIVGLGNPGTEYVNTRHNIGFSAIDHLCELLDCNLDQNAKHSLYTTVYLKLDEKLSSK 224
>gi|254796687|ref|YP_003081523.1| peptidyl-tRNA hydrolase [Neorickettsia risticii str. Illinois]
gi|254589913|gb|ACT69275.1| peptidyl-tRNA hydrolase [Neorickettsia risticii str. Illinois]
Length = 168
Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 63/150 (42%), Positives = 85/150 (56%), Gaps = 3/150 (2%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
M ID I FP + KF +S G++ L KP FMN SG+ L++++NFYK+
Sbjct: 1 MLIDYIRCTFSFPEFLPKFSGLLSSGRVSSSLLYLFKPVAFMNNSGRPLVQLVNFYKVEP 60
Query: 84 LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHII 143
EN +V HDD+DLDF +++K GGG GHNGLKS+ G++Y R R G+GR
Sbjct: 61 -ENVIVFHDDIDLDFAKVKIKRGGGSGGHNGLKSLDANLGRDYWRFRFGVGR--GVGEPA 117
Query: 144 RHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
HVL F+S E L + I +LPLL
Sbjct: 118 EHVLSCFTSLELERLNKLFGFIGTNLPLLL 147
>gi|6321983|ref|NP_012059.1| Pth1p [Saccharomyces cerevisiae S288c]
gi|731759|sp|P38876|PTH_YEAST RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH
gi|458935|gb|AAB68361.1| Yhr189wp [Saccharomyces cerevisiae]
gi|151944133|gb|EDN62426.1| peptidyl-tRNA hydrolase [Saccharomyces cerevisiae YJM789]
gi|190405964|gb|EDV09231.1| peptidyl-tRNA hydrolase [Saccharomyces cerevisiae RM11-1a]
gi|256271508|gb|EEU06556.1| Pth1p [Saccharomyces cerevisiae JAY291]
gi|259146948|emb|CAY80204.1| Pth1p [Saccharomyces cerevisiae EC1118]
gi|285810094|tpg|DAA06881.1| TPA: Pth1p [Saccharomyces cerevisiae S288c]
gi|323308713|gb|EGA61952.1| Pth1p [Saccharomyces cerevisiae FostersO]
gi|323337372|gb|EGA78625.1| Pth1p [Saccharomyces cerevisiae Vin13]
gi|323348205|gb|EGA82455.1| Pth1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354714|gb|EGA86549.1| Pth1p [Saccharomyces cerevisiae VL3]
Length = 190
Score = 124 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 53/186 (28%), Positives = 79/186 (42%), Gaps = 25/186 (13%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT--------- 56
G+GNP +Y RHN+G ++ + S G +
Sbjct: 11 GIGNPEPQYAGTRHNVGLYMLELLRKRLGLQGRT------YSPVPNTGGKVHYIEDEHCT 64
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLK-TGGGDAGHNGL 115
IL +MNLSG+ + +V Y + VIHD+L + G ++L+ GHNGL
Sbjct: 65 ILRSDGQYMNLSGEQVCKVWARYAKYQARHV-VIHDELSVACGKVQLRAPSTSIRGHNGL 123
Query: 116 KSISEKCGKN--YKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIA-R 167
+S+ + G + +L IGIGR P D A + R VLG + E LL + A R
Sbjct: 124 RSLLKCSGGRVPFAKLAIGIGREPGSRSRDPASVSRWVLGALTPQELQTLLTQSEPAAWR 183
Query: 168 SLPLLA 173
+L
Sbjct: 184 ALTQYI 189
>gi|115465271|ref|NP_001056235.1| Os05g0549600 [Oryza sativa Japonica Group]
gi|113579786|dbj|BAF18149.1| Os05g0549600 [Oryza sativa Japonica Group]
Length = 128
Score = 124 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 70 QSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC--GKNYK 127
Q + ++++++K+P L LVI+DDLD+ F LRL GG GHNG++SI +++
Sbjct: 2 QVVAQLVSYFKIP-LSQVLVIYDDLDIPFAKLRLLPKGGHGGHNGMRSIINHLKQSRDFP 60
Query: 128 RLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
RLRIGIGRP I VL +F+ E+ L I+ +++ ++
Sbjct: 61 RLRIGIGRPTGKLDAIGFVLRSFTKEEQEELNLTINRSLQAVRIMLLEGFNK 112
>gi|302404974|ref|XP_003000324.1| predicted protein [Verticillium albo-atrum VaMs.102]
gi|261360981|gb|EEY23409.1| predicted protein [Verticillium albo-atrum VaMs.102]
Length = 194
Score = 123 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ LGNP Y H+ G + + PA K HA + L++
Sbjct: 7 LLFSLGNPSP-YLNTLHSAGHHALAALIPLLPSQPALAKTRHAAKAPLASLSPAYALLQS 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRL-KTGGGDAGHNGLKSISE 120
+ MN+SG+ ++ P L LV+HDDL+ D G +R+ K GHNG+KS+ +
Sbjct: 66 PSLMNVSGKYAAAAYRAFEDPTLS-LLVVHDDLEEDLGVVRIRKWNSSHRGHNGVKSVGK 124
Query: 121 KCGKN------YKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFL-LPIIDNIARSLPL 171
+ R+ +GIGRP + + +VL + ER L + + R L
Sbjct: 125 LLRPADFPAARFARISVGIGRPEAREREAVSEYVLREMTGVERSVLAEKAGEGVLRCLRE 184
Query: 172 L 172
Sbjct: 185 W 185
>gi|269214289|ref|ZP_06158478.1| aminoacyl-tRNA hydrolase [Neisseria lactamica ATCC 23970]
gi|269210125|gb|EEZ76580.1| aminoacyl-tRNA hydrolase [Neisseria lactamica ATCC 23970]
Length = 123
Score = 123 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK 124
MN SGQS+ + FYK+ E LV+HD+LD+ G ++ K GGG+ GHNGLK I + G
Sbjct: 1 MNRSGQSVAALAQFYKIKP-EEILVVHDELDIPCGRIKFKLGGGNGGHNGLKDIQARLGT 59
Query: 125 -NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNH 183
+Y RLR+GIG P D ++ +VL S+ R + + +++P + +
Sbjct: 60 ADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHRRQIDDAVAKSLQAIPDILAGKWEEATRF 119
Query: 184 IVS 186
+ S
Sbjct: 120 LHS 122
>gi|118387769|ref|XP_001026987.1| hypothetical protein TTHERM_00689840 [Tetrahymena thermophila]
gi|89308757|gb|EAS06745.1| hypothetical protein TTHERM_00689840 [Tetrahymena thermophila
SB210]
Length = 182
Score = 123 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 24/183 (13%)
Query: 18 RHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGL--RTILIKPQTFMNLSGQSLLEV 75
RHN+G + I + K ++ D + L +MN+SG+S+ EV
Sbjct: 2 RHNVGKLFISYTANKFNAQLKKIN-QGYLAILNEDTNLPKIGLFNTYCYMNISGKSISEV 60
Query: 76 MN----------------FYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+ F K +EN +V+HDDLD FG +++K GG GHNGLKSI
Sbjct: 61 IKKHQVFQNFYLTLLLNKFEKKVKVENIIVVHDDLDNAFGKVKIKEGGSAEGHNGLKSII 120
Query: 120 EKC-GKNYKRLRIGIGRPPDTAHII--RHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
E K + RL+IGI RP I+ +VLGNFS+ ++ L I + + +L +
Sbjct: 121 EYLDTKEFLRLKIGIDRPNSRDPIVISPYVLGNFSTDQQTRLNTEI--FEKGIEILKNKN 178
Query: 177 DVS 179
+
Sbjct: 179 FIQ 181
>gi|323333207|gb|EGA74606.1| Pth1p [Saccharomyces cerevisiae AWRI796]
Length = 190
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 53/186 (28%), Positives = 79/186 (42%), Gaps = 25/186 (13%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT--------- 56
G+GNP +Y RHN+G ++ + S G +
Sbjct: 11 GIGNPESQYAGTRHNVGLYMLELLRKRLGLQGRT------YSPVPNTGGKVHYIEDEHCT 64
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLK-TGGGDAGHNGL 115
IL +MNLSG+ + +V Y + VIHD+L + G ++L+ GHNGL
Sbjct: 65 ILRSDGQYMNLSGEQVCKVWARYAKYQARHV-VIHDELSVACGKVQLRAPSTSIRGHNGL 123
Query: 116 KSISEKCGKN--YKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIA-R 167
+S+ + G + +L IGIGR P D A + R VLG + E LL + A R
Sbjct: 124 RSLLKCSGGRVPFAKLAIGIGREPGSRSRDPASVSRWVLGALTPQELQTLLTQSEPAAWR 183
Query: 168 SLPLLA 173
+L
Sbjct: 184 ALTQYI 189
>gi|323304651|gb|EGA58414.1| Pth1p [Saccharomyces cerevisiae FostersB]
Length = 190
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 52/186 (27%), Positives = 78/186 (41%), Gaps = 25/186 (13%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT--------- 56
G+GNP +Y RHN+G ++ + S G +
Sbjct: 11 GIGNPEPQYAGTRHNVGLYMLELLRKRLGLQGRT------YSPVPNTGGKVHYIEDEHCT 64
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLK-TGGGDAGHNGL 115
IL +MNLSG+ + +V Y + VIHD+L + G ++ + GHNGL
Sbjct: 65 ILRSDGQYMNLSGEQVCKVWARYAKYQARHV-VIHDELSVACGKVQXRAPSTSIRGHNGL 123
Query: 116 KSISEKCGKN--YKRLRIGIGRPP-----DTAHIIRHVLGNFSSPERYFLLPIIDNIA-R 167
+S+ + G + +L IGIGR P D A + R VLG + E LL + A R
Sbjct: 124 RSLLKCSGGRVPFAKLAIGIGREPGSRSRDPASVSRWVLGALTPQELQTLLTQSEPAAWR 183
Query: 168 SLPLLA 173
+L
Sbjct: 184 ALTQYI 189
>gi|169835714|ref|ZP_02868902.1| peptidyl-tRNA hydrolase [candidate division TM7 single-cell
isolate TM7a]
Length = 99
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPA-WKKKFHAEISEGQLDGLRTILI 59
M I+ GNPG++Y + RHNIG+M ID++ K KF A I+E L+G + +L+
Sbjct: 1 MKIIFAQGNPGNQYEKTRHNIGWMIIDKLAKQLNAAFIHKPKFSASIAESSLNGEKILLV 60
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDF 98
KP TF N +G S +++FYK+ N ++ LV+HDD + F
Sbjct: 61 KPLTFYNDTGVSARALIDFYKI-NTKDILVLHDDFNDRF 98
>gi|116198633|ref|XP_001225128.1| hypothetical protein CHGG_07472 [Chaetomium globosum CBS 148.51]
gi|88178751|gb|EAQ86219.1| hypothetical protein CHGG_07472 [Chaetomium globosum CBS 148.51]
Length = 197
Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF--FPAWKKKFHAEISEGQLDGLRTILI 59
+V LGNPG E H+ G + ++ + P++ + +++ G + L+
Sbjct: 6 LVVISLGNPG-EMRNTYHSAGHIVLEALQRALGPSQPSFSAQRIGKLNTLASIGSQYSLL 64
Query: 60 KPQTFMNLSGQSLLEVMNFYKLPN-----LENYLVIHDDLDLDFGTLRLK-TGGGDAGHN 113
+ MN++G + + +++HDDL+ + G ++++ GHN
Sbjct: 65 QSPAVMNVTGPWAAAAYRQQLVDSRLGAAEVGVVLVHDDLEEELGVIKVREWKRSPRGHN 124
Query: 114 GLKSISEKCGKN-----YKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLLP 160
G+KS+ G N + R+ +GIGRP D A + VL R L
Sbjct: 125 GVKSVHAALGANPAVGKWARVSVGIGRPDARDKAAVSNFVLSKVPRATRSVLED 178
>gi|114626793|ref|XP_001150584.1| PREDICTED: similar to Peptidyl-tRNA hydrolase 1 homolog (S.
cerevisiae) isoform 1 [Pan troglodytes]
Length = 183
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFH--AEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W + H A+++ L + +L
Sbjct: 31 WMVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 88
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN +G+S+ + L E ++HD+LD G L LK GG GHNG++S
Sbjct: 89 LRPRRLMNANGRSVARAAELFGL-TAEEVYLVHDELDKPLGRLALKLGGSARGHNGVRSC 147
Query: 119 SEKCGKN 125
N
Sbjct: 148 ISCLNSN 154
>gi|50305049|ref|XP_452482.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641615|emb|CAH01333.1| KLLA0C06380p [Kluyveromyces lactis]
Length = 186
Score = 120 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 7 LGNPGHEYCENRHNIGFMCI---------DRIHSFHFFPAWKKKFHAEISEGQLDGLRTI 57
LGNP Y RHN G + + D + + H E +L+ +
Sbjct: 12 LGNPEPLYRSTRHNAGVIMLRMLKNEFCPDAVLKTSNVSPHIQYCH----EPRLN--LLM 65
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRL-KTGGGDAGHNGLK 116
L FMNLSG +++ V KLP+ ++V+HD+L++ G ++L K G GHNGL+
Sbjct: 66 LFNKSQFMNLSGHAMIPVWR--KLPHDALHVVLHDELNIPIGNVQLRKPGTSFRGHNGLR 123
Query: 117 SISEKCGKN-YKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLL-PIIDNIARSLPLL 172
+ + G + + +L IGI RP + +VL NF+ E L + L
Sbjct: 124 DMIKMKGDDKFHKLGIGIDRPNSRDPRIVADYVLANFTKGEMETLQYDSFQKAVEHVRKL 183
Query: 173 A 173
Sbjct: 184 L 184
>gi|153879453|ref|ZP_02004828.1| Aminoacyl-tRNA hydrolase [Beggiatoa sp. PS]
gi|152064083|gb|EDN65172.1| Aminoacyl-tRNA hydrolase [Beggiatoa sp. PS]
Length = 106
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 88 LVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN-YKRLRIGIGRPPDTAHIIRHV 146
+VIHDDLD G R+K G D HNGLKSI G N + RLRIGIG P + +V
Sbjct: 1 MVIHDDLDFPPGIARIKKSGSDCRHNGLKSIIAHLGSNQFLRLRIGIGHPGHRDEVTSYV 60
Query: 147 LGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVS 186
L + ++ + I +PL+ E + + +
Sbjct: 61 LNAPTRDDQIAIDIAIKVSLEVMPLILTGEVDKAMQQLHT 100
>gi|144513|gb|AAA23133.1| putative heat shock protein [Chlamydia muridarum]
Length = 168
Score = 118 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 6/153 (3%)
Query: 26 IDRIHSF-HFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNL 84
+D + S + + + + +LIKP T++NL+G+++L F+ + ++
Sbjct: 1 LDMLASRFSGAFREAPRLFSSFMKVETSCGVIVLIKPSTYVNLTGKAVLAAKRFFGV-SV 59
Query: 85 ENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN-YKRLRIGIGRP--PDTAH 141
E L++ DD++ +FG++R + G GHNGLK+ ++ N Y +LR+G+GRP P++
Sbjct: 60 EGILIVADDINREFGSIRFRQDCGAGGHNGLKNTTQVLQSNHYWQLRLGVGRPSNPESEG 119
Query: 142 IIRHVLGNFSSPERYFLLPIIDNIARSL-PLLA 173
+VL NFS ER L + + P LA
Sbjct: 120 GADYVLSNFSFNERKGLNGFFEKGIEEISPWLA 152
>gi|259482957|tpe|CBF77926.1| TPA: carboxylesterase, putative (AFU_orthologue; AFUA_5G05940)
[Aspergillus nidulans FGSC A4]
Length = 202
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 43/188 (22%), Positives = 72/188 (38%), Gaps = 30/188 (15%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDR---IHSFHFFPAWKKKFHAEISEGQLDGLRTIL 58
+A +GNPG Y RH+ G + +D + H P +K + D R ++
Sbjct: 9 LFIASIGNPG-RYRNTRHSAGHVLLDAITPLLPNHLPPRYKTWQSPSLMN---DSGRKLV 64
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGG----GDAGHNG 114
+ +TF L + + +++HD+L+ G + ++ GG GHNG
Sbjct: 65 RELETFKRLETSTTMNA-------KPLTLVILHDELEKPLGKIVVRRGGPEKYSLRGHNG 117
Query: 115 LKSISEKCGKN--YK--------RLRIGIGRPPDT--AHIIRHVLGNFSSPERYFLLPII 162
LK I + K Y R+ +GIGRP + ++VL E +
Sbjct: 118 LKDIFQWLDKKKMYPHDPALSILRIGVGIGRPSSRNSDEVSKYVLTAMGLKELDAINRAA 177
Query: 163 DNIARSLP 170
L
Sbjct: 178 GYAVDVLA 185
>gi|294655063|ref|XP_457140.2| DEHA2B04114p [Debaryomyces hansenii CBS767]
gi|199429661|emb|CAG85134.2| DEHA2B04114p [Debaryomyces hansenii]
Length = 210
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFHAEISEGQLDGLRTILIK 60
FI+ +GNPG NRH+ G + + + + +K ++ S ++D L+K
Sbjct: 9 FIIFSIGNPGST---NRHSTGHIVMKALIEYFGAKQLFKPSSNSMYSMTEVDN--IALVK 63
Query: 61 PQTFMNLSGQSLLEVMNFYKLP-NLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
+MN S +SL + + K+ +V++D+ DLD G +++ + HNG++SI
Sbjct: 64 SNNYMNDSNKSLKQYIEQEKIGLRQAVLIVVYDEFDLDLGKVKISPFKKNESHNGIRSIK 123
Query: 120 EKCGKN-----YKRLRIGIGRPPDT---AHIIRHVLGNFSSPERYFLLP-----IIDNIA 166
E + +L IGIG P + + VL NF ER + ID I
Sbjct: 124 EYISRQSADSTVYKLGIGIGPKPSNATTSTMSSWVLSNFKPDERQIIDNLSIPLAIDYID 183
Query: 167 RSLPLLAKREDVSFLNHIVSVRK 189
+ + + +D S LN S K
Sbjct: 184 HVIDVNGEIQDCSKLN--ASFTK 204
>gi|67903690|ref|XP_682101.1| hypothetical protein AN8832.2 [Aspergillus nidulans FGSC A4]
gi|40740930|gb|EAA60120.1| hypothetical protein AN8832.2 [Aspergillus nidulans FGSC A4]
Length = 211
Score = 117 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 43/188 (22%), Positives = 72/188 (38%), Gaps = 30/188 (15%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDR---IHSFHFFPAWKKKFHAEISEGQLDGLRTIL 58
+A +GNPG Y RH+ G + +D + H P +K + D R ++
Sbjct: 9 LFIASIGNPG-RYRNTRHSAGHVLLDAITPLLPNHLPPRYKTWQSPSLMN---DSGRKLV 64
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGG----GDAGHNG 114
+ +TF L + + +++HD+L+ G + ++ GG GHNG
Sbjct: 65 RELETFKRLETSTTMNA-------KPLTLVILHDELEKPLGKIVVRRGGPEKYSLRGHNG 117
Query: 115 LKSISEKCGKN--YK--------RLRIGIGRPPDT--AHIIRHVLGNFSSPERYFLLPII 162
LK I + K Y R+ +GIGRP + ++VL E +
Sbjct: 118 LKDIFQWLDKKKMYPHDPALSILRIGVGIGRPSSRNSDEVSKYVLTAMGLKELDAINRAA 177
Query: 163 DNIARSLP 170
L
Sbjct: 178 GYAVDVLA 185
>gi|119608091|gb|EAW87685.1| peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae), isoform CRA_a
[Homo sapiens]
Length = 195
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP-AWKKKFH--AEISEGQLDGLRTIL 58
++VAGLGNPG RH++G + ++ +W + H A+++ L + +L
Sbjct: 44 WMVAGLGNPGLP--GTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVL 101
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI 118
++P+ MN +G+S+ + L E ++HD+LD G L LK GG G +
Sbjct: 102 LRPRRLMNANGRSVARAAELFGL-TAEEVYLVHDELDKPLGRLALKLGGSARQCQGCGWV 160
Query: 119 SEKCGKNYKRLR 130
S + +R R
Sbjct: 161 SGAR-RTLRRFR 171
>gi|320165961|gb|EFW42860.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 230
Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 49/223 (21%), Positives = 72/223 (32%), Gaps = 85/223 (38%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE-------GQLDGLR 55
++ GLGNPG +Y RHN G + ++ + K E + Q+ G+R
Sbjct: 7 MIVGLGNPGAQYAGTRHNAGELFVNHLAMLAGVRFAKIGQAGEAATIPSLLELIQIAGVR 66
Query: 56 T--------------ILIK----------------------------------------- 60
+L+K
Sbjct: 67 IPAPPRVNKQPRLAPLLVKTAAAAGDAVHSPAGLQPTSPLASPPVTPPVSPPALADVAVV 126
Query: 61 ---PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKS 117
P +FMN G ++ +L+ +LK GG GHNG++S
Sbjct: 127 LFKPSSFMNECGGNVASA-------------------ELNLAEFKLKAGGSAKGHNGVRS 167
Query: 118 ISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLP 160
I ++ RLRIGIGRP + VL F S E L
Sbjct: 168 IGQRVSLEIPRLRIGIGRPSG-GDVGDFVLKKFRSDELARLND 209
>gi|226329838|ref|ZP_03805356.1| hypothetical protein PROPEN_03750 [Proteus penneri ATCC 35198]
gi|225200633|gb|EEG82987.1| hypothetical protein PROPEN_03750 [Proteus penneri ATCC 35198]
Length = 85
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-KKKFHAEISEGQLDGLRTILIK 60
++ GL NPG +Y + RHN G +D + H + KF + L+G L+
Sbjct: 5 KLIVGLANPGADYAQTRHNAGAWYVDLLAQRHQQSLKEESKFFGYTARINLNGNDVRLLV 64
Query: 61 PQTFMNLSGQSLLEVMNF 78
P TFMNLSG+++ + NF
Sbjct: 65 PTTFMNLSGKAVQAMANF 82
>gi|189190068|ref|XP_001931373.1| peptidyl-tRNA hydrolase 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972979|gb|EDU40478.1| peptidyl-tRNA hydrolase 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 370
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 29/169 (17%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISE-------GQLDGL 54
+VA +GNPG Y H+ G + + + + + K ++S G
Sbjct: 168 LLVASIGNPGATYSNTLHSAGHIVTSALSTAKSYAPFTKGLSGQVSRPPPTHLAFSFTGF 227
Query: 55 RTI-----------LIKPQTFMNLSGQSLLEVMNFY--KLPNLE-------NYLVIHDDL 94
R + + + MN+SG + + N + + +V+HD+L
Sbjct: 228 RHVPTEHDATQDWTFWQSTSLMNVSGTGVKKAYNEWLRGIRQASGSNTLEGRLVVVHDEL 287
Query: 95 DLDFGTLRLKTGG-GDAGHNGLKSISEKCGK-NYKRLRIGIGRPPDTAH 141
+ G + ++ GG GHNG+KS ++ G + R+ +GIGRP
Sbjct: 288 ESALGKITIRDGGVSAKGHNGIKSCQQQLGGIKWWRVGVGIGRPESRDP 336
>gi|39941232|ref|XP_360153.1| hypothetical protein MGG_05527 [Magnaporthe oryzae 70-15]
gi|145022200|gb|EDK06220.1| hypothetical protein MGG_05527 [Magnaporthe oryzae 70-15]
Length = 215
Score = 115 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/200 (21%), Positives = 82/200 (41%), Gaps = 18/200 (9%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH----FFPAWKKKFHAEISEGQLDGLRTI 57
++ +GNP E H+ G M + ++ + P + + + G +
Sbjct: 11 MLIVSVGNP-PPLHETLHSAGHMVLRKLQQHLDATDYQPGFSSQRFGTKNCIASIGPKYT 69
Query: 58 LIKPQTFMNLSGQSLLEVMNFYKLPNLEN---YLVIHDDLDLDFGTLRLKTGGG-DAGHN 113
L++ T MN+ G L + + +V+ D+L+L+FG + GHN
Sbjct: 70 LLQSPTQMNIVGPWLASAWKQHSRLPSDQHPALVVLQDELELEFGKALTREWSSSHKGHN 129
Query: 114 GLKSISEKCGKNYK------RLRIGIGRPP--DTAHIIRHVLGNFSSPERYFL-LPIIDN 164
G++S + + R+RIGIGRP D + + +VL + E+ L +
Sbjct: 130 GIRSAQQSLPPSIHKDERLARVRIGIGRPHERDRSAVSDYVLRRATRDEKDMLEDQTTPS 189
Query: 165 IARSLPLLAKREDVSFLNHI 184
+ L L K+ +++ +
Sbjct: 190 VVTILGELEKKWRRAYMQSL 209
>gi|71899974|ref|ZP_00682120.1| Aminoacyl-tRNA hydrolase [Xylella fastidiosa Ann-1]
gi|71730261|gb|EAO32346.1| Aminoacyl-tRNA hydrolase [Xylella fastidiosa Ann-1]
Length = 94
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFF-PAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG EY + RHN GF +D + A + K A ++ + G L++P
Sbjct: 6 LIVGLGNPGSEYIKTRHNAGFRFVDGLVQREGQCWALESKLFAYVARVFIAGQWVWLLRP 65
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLE 85
TFMNLSG+S+ +NF+K+ +
Sbjct: 66 VTFMNLSGKSICAGLNFWKIKPEQ 89
>gi|328872200|gb|EGG20567.1| Peptidyl-tRNA hydrolase [Dictyostelium fasciculatum]
Length = 419
Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Query: 55 RTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
IL+KP +MNLSG + + + + +P +EN L++ DD L+ G +RL+ G G NG
Sbjct: 281 ELILVKPMKYMNLSGGVVRAMRSQFDVP-IENILIMVDDTHLELGFVRLRGKGSAGGQNG 339
Query: 115 LKSISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
+ I ++ G + RLRIG+G + HVL F + + + +
Sbjct: 340 MADIIKRLGTDKVSRLRIGVGHQYPGGSLATHVLSKFPIDSMRDVAKSCELSSLIALMWI 399
Query: 174 KREDVSFLNHIVSVRK 189
++ ++ +V K
Sbjct: 400 EQGVDRTMSLTNNVSK 415
Score = 58.5 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH 33
F++ GLGNP E+ RHN+GF+ +D++
Sbjct: 149 FMIVGLGNPDKEHLTTRHNMGFLAVDQLAKLL 180
>gi|194693948|gb|ACF81058.1| unknown [Zea mays]
Length = 135
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 45/73 (61%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG++Y RHN+GF +DRI + + + + G + + +++KP
Sbjct: 62 WLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKP 121
Query: 62 QTFMNLSGQSLLE 74
Q++MN SG+++
Sbjct: 122 QSYMNYSGEAVSY 134
>gi|327300933|ref|XP_003235159.1| hypothetical protein TERG_04211 [Trichophyton rubrum CBS 118892]
gi|326462511|gb|EGD87964.1| hypothetical protein TERG_04211 [Trichophyton rubrum CBS 118892]
Length = 255
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 50/237 (21%), Positives = 84/237 (35%), Gaps = 63/237 (26%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK---FHAEISEGQLDGL--RT 56
F +A +GNPG Y H+ G + + + + +E L R
Sbjct: 7 FFIASIGNPGQTYYNTLHSAGHILLRSFAELMNAGPFHPDPTLSNGLTTETYLPKTRSRL 66
Query: 57 ILIKPQTFMNLSGQSLLEVMNFY----------KLPNLE------------------NYL 88
L + ++MN SG SL + +P + N +
Sbjct: 67 TLWQSPSYMNTSGPSLARAYKLWLARENLASDIPIPPPDIGKKKARGMQPMVHVRATNLI 126
Query: 89 VIHDDLDLDFGTLRLKTGG---GDAGHNGLKSISEKCGK-----------------NYKR 128
++HD+L+ +G L ++ GG GHNG+KS+ E K R
Sbjct: 127 LLHDELERSYGNLYIRYGGPEMSSRGHNGIKSVVESLVKARLLSSGCGALSSTNPTALIR 186
Query: 129 LRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARSLPL--LAKREDVSFL 181
L IG+GRP + ++L + S + + A+ + L L +RE
Sbjct: 187 LAIGVGRPMSRERDAVSDYLLKSISKGQHDAI------AAKGIDLRQLLEREISRIQ 237
>gi|296808913|ref|XP_002844795.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238844278|gb|EEQ33940.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 250
Score = 110 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 51/234 (21%), Positives = 85/234 (36%), Gaps = 65/234 (27%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK---FHAEISEGQLDGL--RT 56
F +A +GNPG Y H+ G + + + + +E L R
Sbjct: 7 FFIASIGNPGQTYYNTLHSAGHILLRSFAELMNAGPFNPDPSLSNGLTTETYLPKTQSRL 66
Query: 57 ILIKPQTFMNLSGQSLLEVMNFY----------KLPNLE------------------NYL 88
L + ++MN SG SL+ + +P L+ N +
Sbjct: 67 TLWQSPSYMNTSGPSLVRAYKSWLARENLASDIPVPPLDVGKRKARGMQPMTHTRATNLI 126
Query: 89 VIHDDLDLDFGTLRLKTGG---GDAGHNGLKSISEKCGK----------------NYKRL 129
++HD+L+ +G L ++ GG GHNG+KS+ E K RL
Sbjct: 127 LLHDELERSYGNLHIRYGGPEMSSRGHNGIKSVVESLVKAKLLSSGGGLSLASPTALMRL 186
Query: 130 RIGIGRP--PDTAHIIRHVLGNFSSPE-----------RYFLLPIIDNIARSLP 170
IG+GRP D + ++L + S + R L I I +++
Sbjct: 187 AIGVGRPLSRDRDAVSDYLLKSISKSQHDVLAAKGTDLRQLLEKEISRIQKAME 240
>gi|303311711|ref|XP_003065867.1| hypothetical protein CPC735_050920 [Coccidioides posadasii C735
delta SOWgp]
gi|240105529|gb|EER23722.1| hypothetical protein CPC735_050920 [Coccidioides posadasii C735
delta SOWgp]
Length = 240
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 43/231 (18%), Positives = 81/231 (35%), Gaps = 63/231 (27%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW--KKKFHAEISE---GQLDGLRT 56
+A LGNP +Y + H+ G + + + ++ ++ R
Sbjct: 4 LFIASLGNPPPKYHKTLHSAGHILLRAVAEHLSANSFALSPHLKGALATEAYLPHSQTRL 63
Query: 57 ILIKPQTFMNLSGQSLLEVMNFY-----------------------KLPNLENYLVIHDD 93
L + T MN+SG +++ + + +++HD+
Sbjct: 64 TLWQSPTLMNISGPTMVRAYKSWLAREGADPVLPLAANTPGRKKNADHRPPLSLILVHDE 123
Query: 94 LDLDFGTLRLKTGG---GDAGHNGLKSISEKC---------------------GKN---- 125
L+L G LR++ GG GHNG+KS+++ G++
Sbjct: 124 LELHPGELRIRRGGAELSARGHNGVKSVTQSLVEAGLLPASSSLTKARGKGAAGEDAALP 183
Query: 126 --YKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
R+ IGIGRP D + +VL + + R + +L
Sbjct: 184 PIVLRVGIGIGRPASRDPGTVADYVLREMRPAQY---QETCNLAGRVVEML 231
>gi|119193889|ref|XP_001247548.1| hypothetical protein CIMG_01319 [Coccidioides immitis RS]
Length = 240
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 49/232 (21%), Positives = 87/232 (37%), Gaps = 65/232 (28%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCI----DRIHSFHFFPAWKKKFHAEISEGQLD--GLR 55
+A LGNP +Y + H+ G + + + + + F P+ K A +E L R
Sbjct: 4 LFIASLGNPPPKYHKTLHSAGHIILRAVAEHLSANSFAPSPHLK-GALATEAYLPRSQTR 62
Query: 56 TILIKPQTFMNLSGQSLLEVMNFY-----------------------KLPNLENYLVIHD 92
L + T MN+SG +++ + + +++HD
Sbjct: 63 LTLWQSPTLMNISGPTMVRAYKSWLAREGADPVLPLAANTPGRKKNADHRPPLSLILVHD 122
Query: 93 DLDLDFGTLRLKTGG---GDAGHNGLKSISEKC---------------------GKN--- 125
+L+L G LR++ GG GHNG+KS+++ G++
Sbjct: 123 ELELHPGELRIRRGGAELSARGHNGVKSVTQSLVEAGLLPASSSLTKARGKGAAGEDAAL 182
Query: 126 ---YKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
R+ IGIGRP D + +VL + + R + +L
Sbjct: 183 PPIVLRVGIGIGRPASRDPGTVADYVLREMRPTQY---QETCNLAGRVVEML 231
>gi|320039776|gb|EFW21710.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 240
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/231 (18%), Positives = 81/231 (35%), Gaps = 63/231 (27%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW--KKKFHAEISEGQL---DGLRT 56
+A LGNP +Y + H+ G + + + ++ ++ R
Sbjct: 4 LFIASLGNPPPKYHKTLHSAGHILLRAVAEHLSANSFALSPHLKGALATEAYLPRSQTRL 63
Query: 57 ILIKPQTFMNLSGQSLLEVMNFY-----------------------KLPNLENYLVIHDD 93
L + T MN+SG +++ + + +++HD+
Sbjct: 64 TLWQSPTLMNISGPTMVRAYKSWLAREGADPVLPLAANTPGRKKNADHRPPLSLILVHDE 123
Query: 94 LDLDFGTLRLKTGG---GDAGHNGLKSISEKC---------------------GKN---- 125
L+L G LR++ GG GHNG+KS+++ G++
Sbjct: 124 LELHPGELRIRRGGAELSARGHNGVKSVTQSLVEAGLLPASSSLTKARGKGAAGEDAALP 183
Query: 126 --YKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
R+ IGIGRP D + +VL + + R + +L
Sbjct: 184 PIVLRVGIGIGRPASRDPGTVADYVLREMRPAQY---QETCNLAGRVVEML 231
>gi|326468719|gb|EGD92728.1| hypothetical protein TESG_00297 [Trichophyton tonsurans CBS 112818]
Length = 255
Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/237 (21%), Positives = 86/237 (36%), Gaps = 63/237 (26%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK---FHAEISEGQLDGL--RT 56
F +A +GNPG Y H+ G + + + + +E L R
Sbjct: 7 FFIASIGNPGQTYYNTLHSAGHILLRSFAELMNAAPFHVDPILSNGLTTETYLPKTRSRL 66
Query: 57 ILIKPQTFMNLSGQSLLEVMNFY----------KLPNLE------------------NYL 88
L + ++MN SG SL + +P+ + N +
Sbjct: 67 TLWQSPSYMNTSGPSLARAYKSWLARENLSSDIPIPSPDIGKKKARGMQPMVHVRATNLI 126
Query: 89 VIHDDLDLDFGTLRLKTGG---GDAGHNGLKSISEKC---------GKNY--------KR 128
++HD+L+ +G L ++ GG GHNG+KS+ E G + R
Sbjct: 127 LLHDELERSYGNLYIRYGGPEMSSRGHNGIKSVVESLVKARLLSSGGGAFSSTNPTALIR 186
Query: 129 LRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARSLPL--LAKREDVSFL 181
L IG+GRP + ++L + S + + A+ + L L +RE
Sbjct: 187 LAIGVGRPMSRERDAVSDYLLKSISKGQHDAI------AAKGIDLRQLLEREISRIQ 237
>gi|326481329|gb|EGE05339.1| peptidyl-tRNA hydrolase [Trichophyton equinum CBS 127.97]
Length = 255
Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/237 (21%), Positives = 86/237 (36%), Gaps = 63/237 (26%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK---FHAEISEGQLDGL--RT 56
F +A +GNPG Y H+ G + + + + +E L R
Sbjct: 7 FFIASIGNPGQTYYNTLHSAGHILLRSFAELMNAAPFHVDPILSNGLTTETYLPKTRSRL 66
Query: 57 ILIKPQTFMNLSGQSLLEVMNFY----------KLPNLE------------------NYL 88
L + ++MN SG SL + +P+ + N +
Sbjct: 67 TLWQSPSYMNTSGPSLARAYKSWLARENLASDIPIPSPDIGKKKARGMQPMVHVRATNLI 126
Query: 89 VIHDDLDLDFGTLRLKTGG---GDAGHNGLKSISEKC---------GKNY--------KR 128
++HD+L+ +G L ++ GG GHNG+KS+ E G + R
Sbjct: 127 LLHDELERSYGNLYIRYGGPEMSSRGHNGIKSVVESLVKARLLSSGGGAFSSTNPTALIR 186
Query: 129 LRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARSLPL--LAKREDVSFL 181
L IG+GRP + ++L + S + + A+ + L L +RE
Sbjct: 187 LAIGVGRPMSRERDAVSDYLLKSISKGQHDAI------AAKGIDLRQLLEREISRIQ 237
>gi|150864568|ref|XP_001383437.2| hypothetical protein PICST_30737 [Scheffersomyces stipitis CBS
6054]
gi|149385824|gb|ABN65408.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 186
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 11/154 (7%)
Query: 17 NRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVM 76
NRH+ G + + + F A + + S + + +L+K T+MN SG+ + +
Sbjct: 2 NRHSTGHFILKHLVEY--FSAKQLVRRGDYSVTRTNDYSVVLVKSNTYMNESGRGFRQFV 59
Query: 77 NFYKLPNLENYLVI-HDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGK-----NYKRLR 130
+ ++ +VI +DD D G ++L + HNG+ IS +L
Sbjct: 60 DNEDFQPSQSIVVILYDDFDNKLGKVKLSELKKNESHNGIGDISRALHGIKSDVKIYKLG 119
Query: 131 IGIGRPPDTAH---IIRHVLGNFSSPERYFLLPI 161
IGIG P A + VL F+ E L
Sbjct: 120 IGIGPKPSKASGAIVSNWVLSKFTDEELTILRET 153
>gi|315048657|ref|XP_003173703.1| hypothetical protein MGYG_03876 [Arthroderma gypseum CBS 118893]
gi|311341670|gb|EFR00873.1| hypothetical protein MGYG_03876 [Arthroderma gypseum CBS 118893]
Length = 255
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 50/237 (21%), Positives = 86/237 (36%), Gaps = 63/237 (26%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK---FHAEISEGQLDGL--RT 56
F +A +GNPG Y H+ G + + + + +E L R
Sbjct: 7 FFIASIGNPGQAYYNTLHSAGHILLRSFAEVMNAAPFHPDPNLSNGLTTETYLPKTQSRL 66
Query: 57 ILIKPQTFMNLSGQSLLEVMNFY----------KLPNLE------------------NYL 88
L + ++MN SG SL + +P+ + N +
Sbjct: 67 TLWQSPSYMNTSGPSLARAYKAWLARENIASDIPIPSQDVGKKKARGMQPMTHVRATNLI 126
Query: 89 VIHDDLDLDFGTLRLKTGG---GDAGHNGLKSISEKCGK-----------------NYKR 128
++HD+L+ +G L ++ GG GHNG+KS+ E K R
Sbjct: 127 LLHDELERSYGNLYIRYGGPEMSSRGHNGIKSVVESLVKAKLLSSSGGALSSTNPTALIR 186
Query: 129 LRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARSLPL--LAKREDVSFL 181
L IG+GRP + ++L + S + + A+ + L L +RE +
Sbjct: 187 LAIGVGRPMSRERDAVSDYLLKSISKGQHDAI------AAKGIDLRQLLEREILRIQ 237
>gi|260945179|ref|XP_002616887.1| hypothetical protein CLUG_02331 [Clavispora lusitaniae ATCC 42720]
gi|238848741|gb|EEQ38205.1| hypothetical protein CLUG_02331 [Clavispora lusitaniae ATCC 42720]
Length = 196
Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 17/192 (8%)
Query: 4 VA--GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ +GNPG NRH+ G + + S KK + S LD + +K
Sbjct: 3 IVFFSIGNPGR---MNRHSTGHYVLQHLVSDFGATQLVKK--GKYSITSLDN--VMFVKS 55
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSI--- 118
+MN SG+SL + K+ +V+ DD +L +RL+ + HNG+KSI
Sbjct: 56 NAYMNESGESLRAFLGNEKIRQC-ILVVLFDDFELVMPKVRLQRLKQNESHNGIKSIGRE 114
Query: 119 SEKCGKNYKRLRIGIGRPPD---TAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
+ +L +GIG P + VL +F E+ L + I + + +
Sbjct: 115 IQSQNIEALKLGVGIGPKPQNASRDSMASWVLSDFKLEEKQLLSTSLQTIYKYVEHIISS 174
Query: 176 E-DVSFLNHIVS 186
+ ++ N + S
Sbjct: 175 DGEIGDCNKLNS 186
>gi|10802767|gb|AAG23605.1|AF244656_1 peptidyl-tRNA hydrolase [Carboxydothermus hydrogenoformans]
Length = 90
Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 16 ENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEV 75
RHN G + D + H K+KF + ++ G++ G+ +L+KPQT+MNLSG ++ E
Sbjct: 1 NTRHNAGLLVSDELGKKHGILITKRKFKSLVAAGEILGVXVLLLKPQTYMNLSGTAVQEA 60
Query: 76 MNFYKLPNLENYLVIHDDLDLDF 98
++F KLP L +V++DD DL
Sbjct: 61 VSFNKLP-LSRLVVVYDDEDLPL 82
>gi|169765233|ref|XP_001817088.1| peptidyl-tRNA hydrolase [Aspergillus oryzae RIB40]
gi|83764942|dbj|BAE55086.1| unnamed protein product [Aspergillus oryzae]
Length = 257
Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 46/242 (19%), Positives = 81/242 (33%), Gaps = 80/242 (33%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF--HFFPAWKKKFHAEISEGQLDGLRTILI 59
+A +GNP Y + RH+ G + +D + + FP K
Sbjct: 15 LFIASIGNP-RPYRQTRHSAGHILLDALIPLLPNRFPLISTKHQPSTGPLF-----YRTW 68
Query: 60 KPQTFMNLSG-QSLLEVMNFYKLPNLE--------------------------------- 85
++MN SG + + ++ N+ E
Sbjct: 69 YSPSYMNESGPKLVRQLKNWISTTQTEVLEKVIMQGNVALSETTEVADPENHEWQHRGTD 128
Query: 86 ---------NYLVIHDDLDLDFGTLRLKTGG----GDAGHNGLKSISEKC---------- 122
+++HD+L+ G +R+K GG GH GL SI E
Sbjct: 129 PQSLKILAPTLVILHDELEAPLGKVRVKRGGPETASLRGHRGLTSIMESLRGKGLHPPRT 188
Query: 123 ---------GKNYKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLL----PIIDNIAR 167
G + R+ +GIGRP + + +VL ++ E + P++D +A
Sbjct: 189 RPGETRSHEGLSVLRIGVGIGRPSTRNRGDVADYVLTEMNAIELAAVRAAAGPVLDILAD 248
Query: 168 SL 169
+
Sbjct: 249 EI 250
>gi|23009177|ref|ZP_00050323.1| COG0193: Peptidyl-tRNA hydrolase [Magnetospirillum magnetotacticum
MS-1]
Length = 101
Score = 103 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 111 GHNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLP 170
GHNGL+SI+ CG +Y+R+R+GIG P D A + +VL +F+ E ++ + A P
Sbjct: 1 GHNGLRSITALCGNDYRRVRLGIGHPGDKALVHAYVLNDFAKSEEPWVEDLCRATADHAP 60
Query: 171 LLAKREDVSFLNHIV 185
LLA ED SF N +
Sbjct: 61 LLAAGEDASFQNKVH 75
>gi|164661699|ref|XP_001731972.1| hypothetical protein MGL_1240 [Malassezia globosa CBS 7966]
gi|159105873|gb|EDP44758.1| hypothetical protein MGL_1240 [Malassezia globosa CBS 7966]
Length = 281
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/219 (21%), Positives = 77/219 (35%), Gaps = 73/219 (33%)
Query: 4 VAGLGNPGHEYCE--NRHNIGFMCID---RIHSFHFFPAWK------------------- 39
V GLGN Y RH+IG C+ R+ H +
Sbjct: 30 VVGLGN----YTHPKTRHSIGQYCLSPLMRLAESHDQALRREIARRVSRLPPDAPTFELP 85
Query: 40 -----------KKFHAEIS--------------------EGQLDGLRTILI-----KPQT 63
+ ++ + +L +L P+
Sbjct: 86 ETTPLQSFRHVRASKGWLACVSVLLDSAPSKGSALRRAPDFRLGKYPYVLFDLVFYIPRV 145
Query: 64 FMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC- 122
MN++G + + Y LE+ +++HD+L FG + K GG AGHNG++S+ +
Sbjct: 146 LMNVNGTGVASALRMYPDVTLEHAILVHDELQRPFGKVAFKAGGSAAGHNGVRSVQQVLR 205
Query: 123 -------GKNYKRLRIGIGRPPDTA-HIIRHVLGNFSSP 153
+ R+RIGI RP D + + +VLG
Sbjct: 206 CSGRSMNQPDIARIRIGIDRPQDPSHDVGAYVLGAMPPA 244
>gi|294876857|ref|XP_002767825.1| Peptidyl-tRNA hydrolase, putative [Perkinsus marinus ATCC 50983]
gi|239869695|gb|EER00543.1| Peptidyl-tRNA hydrolase, putative [Perkinsus marinus ATCC 50983]
Length = 204
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLEN--YLVIHDDLDLDFGTLRLKTGGGDAG 111
L+KP+TFMN SG + ++ +L + LV+ DDL + G LR+K GG G
Sbjct: 55 ESVNLLKPRTFMNRSGLAAGPALSDLRLRADDRNSVLVVCDDLTIPLGQLRMKPGGSSGG 114
Query: 112 HNGLKSISE-KCGKNYKRLRIGIGRPPDTAHIIRHV-----LGNFSSPERYFLLPIIDNI 165
NGL SI + + RLRIG+G+ + + V LG ++ E+ +
Sbjct: 115 QNGLDSIIKVTRTEEVARLRIGMGKRMIGGSLEK-VKPSLALGKLNAEEQALFYEVSKYA 173
Query: 166 ARSLPLLAKREDVSFLNHIVSVR 188
A+ + + R +N +++
Sbjct: 174 AQVIRVWLFRGFDLAVNLANTIK 196
>gi|238878698|gb|EEQ42336.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 163
Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 56 TILIKPQ-TFMNLSGQSLLEVMNFYKLPNLEN-YLVIHDDLDLDFGTLRL-KTGGGDAGH 112
+L K + MNL G + + +F K ++ +V+HD+L +D G ++ K G GH
Sbjct: 28 LVLFKSNDSLMNLQGLPISK--HFGKHDQGKSALVVLHDELQVDLGKYQIRKPGTSSRGH 85
Query: 113 NGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLL-PIIDNIARSLPL 171
NGLKSI + Y +L IGIGRPP + ++ +VL FSS E + ++ + L
Sbjct: 86 NGLKSIDKYLKNRYFKLGIGIGRPPASQSVVHYVLKKFSSQELDVIDWEVLPKCVKDLEN 145
Query: 172 LAKREDV 178
+ ++
Sbjct: 146 MVIKDLE 152
>gi|225549826|ref|ZP_03770789.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 118a]
gi|225369583|gb|EEG99033.1| peptidyl-tRNA hydrolase [Borrelia burgdorferi 118a]
Length = 95
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
++ GLGNPG E+ RHN+GF +D+I S + +KK E SE ++ R IL+KP
Sbjct: 3 LLILGLGNPGLEFSLTRHNVGFSLLDKIVSKNGLFLKRKK-KYEYSELKMISGRVILVKP 61
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLD 95
T+MNLSG + + + + ++N LV+ D++D
Sbjct: 62 LTYMNLSGSLFPSIFSDFYMC-IKNLLVVLDNVD 94
>gi|299753529|ref|XP_001833333.2| hypothetical protein CC1G_04312 [Coprinopsis cinerea okayama7#130]
gi|298410343|gb|EAU88606.2| hypothetical protein CC1G_04312 [Coprinopsis cinerea okayama7#130]
Length = 215
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 26/177 (14%)
Query: 3 IVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLD------GLRT 56
VAGLGN RH+IG + + HF A + I G +D ++
Sbjct: 17 FVAGLGN--APMPNTRHSIGQYIVSSL-GTHFGIALRSTRGGHIGSGVVDLPSASGPVKI 73
Query: 57 ILIKPQTFMNLSGQSLLEVMNFY------KLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
L K + MN SG S+++ N++V+ D + L + GG
Sbjct: 74 TLFKSKQLMNASGPSIVQAYRAVLSQTGGAPKGSSNFVVLGDSISHTALKLSARLGGSAQ 133
Query: 111 GHNGLKSISEKCG--KNYKRLRIGIGRPPDTA---------HIIRHVLGNFSSPERY 156
GHNGLKSIS G K++ + R+G+GR D V+G S E+
Sbjct: 134 GHNGLKSISNALGRAKDFWQFRVGVGRGVDEDGASIIDKNIDAAEWVMGRLSEAEKE 190
>gi|312601161|gb|ADQ90416.1| Peptidyl-tRNA hydrolase [Mycoplasma hyopneumoniae 168]
Length = 124
Score = 98.9 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC-G 123
MN SG + E++ FYK+ N ++ ++I+DD++ + G +KT G G G+ I EKC
Sbjct: 1 MNKSGDFVEELIKFYKI-NTQDLMIIYDDMNFEVGQAAIKTTGSAGGQRGMAHIIEKCKT 59
Query: 124 KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNH 183
K KRL+IGI R + +VL F + + +I+ A L ++ +
Sbjct: 60 KEIKRLKIGISR---GENAKEYVLSPFLPKDNAKIKLVIEEAANILIFYLSNSFITTIEK 116
Query: 184 IVSVR 188
+ +
Sbjct: 117 FNANK 121
>gi|149038989|gb|EDL93209.1| rCG45678, isoform CRA_a [Rattus norvegicus]
Length = 310
Score = 98.9 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP---AWKKKFHAEISEGQLDGLRTILIK 60
VAGLGNPG RH++G + +I A + A+++ + +L++
Sbjct: 140 VAGLGNPG--MPGTRHSVGMAVLGQIAQRLGVAENWARDSRCAADLALAPFGDAQLVLLR 197
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGG 107
P+ MN++G+S+ + + L + E ++HD+LD G L LK GG
Sbjct: 198 PRRLMNVNGRSVAKAAELFGL-SAEEIYLVHDELDKPLGKLALKLGG 243
>gi|225466188|ref|XP_002265105.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 317
Score = 97.4 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 26 IDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLE 85
+D + P + +G + L KP T+M+LSG+S + + KLP L+
Sbjct: 132 VDTLQE---IPMDTVHYKEFFRQGCAGDVPVFLAKPWTYMDLSGKSAGPLAAYCKLP-LD 187
Query: 86 NYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS--EKCGKNYKRLRIGIGRP 136
+ +V HDD+ L +G LRL GG HNGL S+ + + + R R+ +G+P
Sbjct: 188 SVVVFHDDIGLPWGLLRLHHKGGRRNHNGLMSVILYFRGNREFLRPRVDVGKP 240
>gi|126640882|ref|YP_001083866.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii ATCC 17978]
gi|126386766|gb|ABO11264.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii ATCC 17978]
Length = 95
Score = 97.0 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 51/93 (54%)
Query: 96 LDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
++ G +RLKTGGG GHNGL+ I G N+ RLRIGIG P + HVLG S E+
Sbjct: 1 MNPGVIRLKTGGGHGGHNGLRDIVPHIGPNFHRLRIGIGHPGSKERVSGHVLGKAPSSEQ 60
Query: 156 YFLLPIIDNIARSLPLLAKREDVSFLNHIVSVR 188
+ ID+ + LL + + +N I + +
Sbjct: 61 SLMDGAIDHALSKVKLLVQGQVPQAMNQINAYK 93
>gi|328772280|gb|EGF82318.1| hypothetical protein BATDEDRAFT_86574 [Batrachochytrium
dendrobatidis JAM81]
Length = 222
Score = 96.6 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
L+KP MN+SG S+L+ + L + ++ D+D FGT+ LKTGG GHN
Sbjct: 94 RTITLLKPAALMNISGISVLKAIKKLHLKPSDCIIIHD-DIDRKFGTISLKTGGSANGHN 152
Query: 114 GLKSISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII 162
G+KS+ + + RLR+G+GRP + AH+ R VL F S E+ L +
Sbjct: 153 GIKSVMSSMASDAFLRLRVGVGRPENKAHVARFVLEPFDSIEQVALHDSV 202
>gi|74205061|dbj|BAE20993.1| unnamed protein product [Mus musculus]
Length = 209
Score = 96.2 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW---KKKFHAEISEGQLDGLRTIL 58
++VAGLGN G RH++G + +I + A+++ L + +L
Sbjct: 35 WLVAGLGNHG--MPGTRHSVGMAVLGQIARRLGVAENWTRNSRCAADLALAPLGDAQLVL 92
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGG 107
++P+ MN++G+S+ + L E ++HD+LD G L LK GG
Sbjct: 93 LRPRRLMNVNGRSVARAAELFGL-TAEEIYLVHDELDKPLGKLALKLGG 140
>gi|237750265|ref|ZP_04580745.1| predicted protein [Helicobacter bilis ATCC 43879]
gi|229374159|gb|EEO24550.1| predicted protein [Helicobacter bilis ATCC 43879]
Length = 472
Score = 96.2 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 29 IHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYL 88
+ S +++K + +E ++ + I P TFMN SG +L + + +
Sbjct: 126 LDSLELQKIFREKLGSLSNEYEI-----LCIAPTTFMNRSGIALQSIEKKCNIAQ---MI 177
Query: 89 VIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGR 135
VI+DDLD FG L + GG GHNGLKSI E ++Y R+++GIG
Sbjct: 178 VIYDDLDTRFGNLSFRYKGGSGGHNGLKSIHEYVKRDYLRVKLGIGN 224
Score = 53.9 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 4 VAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP 36
+ GLGN G +Y RHN+GF+ + I P
Sbjct: 20 IVGLGNIGTKYAMTRHNMGFLSLYAITQMLNNP 52
>gi|212535760|ref|XP_002148036.1| peptidyl-tRNA hydrolase, putative [Penicillium marneffei ATCC
18224]
gi|210070435|gb|EEA24525.1| peptidyl-tRNA hydrolase, putative [Penicillium marneffei ATCC
18224]
Length = 270
Score = 96.2 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/259 (18%), Positives = 76/259 (29%), Gaps = 84/259 (32%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+A +GNP Y E RH+ G + +D + H + + K
Sbjct: 13 LFIASIGNP-APYTETRHSAGHLLLDALQP-HLHERIGLSTPGSNGQNLSKSIFYSTWKS 70
Query: 62 QTFMNLSGQSLLEV-----------------------------------MNFYKLPNLEN 86
+ MN+SG +L M K + E
Sbjct: 71 PSLMNVSGPPVLRQLKSWLSDRKKYFDTLIHLNNNSYSSTAETGSSSSNMQLLKSSSSEP 130
Query: 87 Y---------------LVIHDDLDLDFGTLRLKTGG----GDAGHNGLKSISEKC-GK-- 124
+++HD+L+ G ++++ GG GH GL SI E G
Sbjct: 131 ITIDTRALTQRFRPTLVILHDELEAKPGQIKIRRGGPQQASLRGHKGLISIMESLRGAGL 190
Query: 125 ---------------------NYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPI 161
R+ +GIGRP + +VL E L
Sbjct: 191 LSSSSATTAATTAAKSATSSMAILRIGVGIGRPTSRERNAVADYVLSKMGPQEMQALRET 250
Query: 162 IDNIARSL--PLLAKREDV 178
+ + L + + ED
Sbjct: 251 VPEVVEVLVQEMYRRDEDE 269
>gi|153217684|ref|ZP_01951365.1| peptidyl-tRNA hydrolase [Vibrio cholerae 1587]
gi|124113371|gb|EAY32191.1| peptidyl-tRNA hydrolase [Vibrio cholerae 1587]
Length = 93
Score = 94.3 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 115 LKSISEKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
LK K G N + RLR+GIG P + +VLG + E+ L +D R L +L
Sbjct: 16 LKDTISKLGNNKEFYRLRLGIGHPGHKDKVAGYVLGKAPAKEQECLDAAVDESVRCLEIL 75
Query: 173 AKREDVSFLNHIVSVR 188
K N + + +
Sbjct: 76 MKDGLTKAQNRLHTFK 91
>gi|122890586|emb|CAM14094.1| novel protein similar to human and mouse peptidyl-tRNA hydrolase 1
homolog (S. cerevisiae) (PTRH1; zgc:112961) [Danio
rerio]
Length = 154
Score = 93.9 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFP---AWKKKFHAEISEGQLDGLRTIL 58
+V GLGNPG +RH++G + + P +K E+ QL ++ +L
Sbjct: 57 KMVVGLGNPG--MTGSRHSVGMAVLTTLAERLGAPDGWRSDRKVSGEVVVTQLQDVQLVL 114
Query: 59 IKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFG 99
++P+ MN++G S+ + + Y + E+ L+IHD+LD G
Sbjct: 115 LRPKLLMNVNGVSVAKAASRYLI-QPEHILLIHDELDKPLG 154
>gi|253730937|ref|ZP_04865102.1| possible aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253725326|gb|EES94055.1| possible aminoacyl-tRNA hydrolase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
Length = 74
Score = 93.1 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 118 ISEKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
I K G N + RLRIGIG P D ++ VLG E+ + ID AR +
Sbjct: 1 IISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTD 60
Query: 176 EDVSFLNHIVSVR 188
N + + +
Sbjct: 61 GLTKATNRLHAFK 73
>gi|115438418|ref|XP_001218061.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114188876|gb|EAU30576.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 292
Score = 92.8 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/251 (17%), Positives = 76/251 (30%), Gaps = 81/251 (32%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTIL--I 59
+A +GNP Y RH+ G + +D + H P +S
Sbjct: 44 LFIASIGNP-RPYRTTRHSAGHLLLDALIP-HLLPRI-----PLVSAATSAPQPLFYKTW 96
Query: 60 KPQTFMNLSGQS-LLEVMNFYKLPNLENY------------------------------- 87
+ MN+SG+ + E+ + +
Sbjct: 97 HSPSLMNVSGRKLVRELQRWMATAQTDILERVVQAGHVRVEQPESDVSVPDPATSSWQRR 156
Query: 88 --------------LVIHDDLDLDFGTLRLKTGG----GDAGHNGLKSISEKCGKN--YK 127
+++HD+L+ G +R+K GG GH GL S+ E+ Y
Sbjct: 157 GIDPRTLRQLEPTLVILHDELEAPLGKVRVKRGGPEAASLRGHRGLISVMEQLKAKKLYP 216
Query: 128 ------------------RLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
R+ +GIGRP + + +VL + E + + +
Sbjct: 217 PAQTRGGGGGGAGGLSVVRIGVGIGRPDSREKGSVADYVLTEMNPRELAAVRAAVGPVLD 276
Query: 168 SLPLLAKREDV 178
L RE
Sbjct: 277 ILEDELYREPE 287
>gi|294921825|ref|XP_002778733.1| Peptidyl-tRNA hydrolase, putative [Perkinsus marinus ATCC 50983]
gi|239887453|gb|EER10528.1| Peptidyl-tRNA hydrolase, putative [Perkinsus marinus ATCC 50983]
Length = 160
Score = 92.0 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 23/141 (16%)
Query: 54 LRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHN 113
L+KP+TFMN SGQ LV+ DDL + G LR+K GG G N
Sbjct: 29 ESVNLLKPRTFMNRSGQ----------------VLVVCDDLTIPLGQLRMKPGGSSGGQN 72
Query: 114 GLKSISE-KCGKNYKRLRIGIGRPPDTAHIIRHV-----LGNFSSPERYFLLPIIDNIAR 167
GL SI + + RLRIG+G+ + + V LG ++ E+ + A+
Sbjct: 73 GLDSIIKVTRTEEVARLRIGMGKRMIGGSLEK-VKPSLALGKLNAEEQALFYEVSKYAAQ 131
Query: 168 SLPLLAKREDVSFLNHIVSVR 188
+ + R N +++
Sbjct: 132 VIRVWLFRGFDLAANLANTIK 152
>gi|159126228|gb|EDP51344.1| peptidyl-tRNA hydrolase, putative [Aspergillus fumigatus A1163]
Length = 256
Score = 91.2 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/224 (18%), Positives = 72/224 (32%), Gaps = 79/224 (35%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK- 60
+A LGN Y + RH+ G + +D + A + + I K
Sbjct: 15 LFIASLGNM-RLYRQTRHSAGHILLDALVPLLPS-------RAPLVSSRQPSAGPIFYKT 66
Query: 61 --PQTFMNLSG-QSLLEVMNFYKLPNLE-------------------------------- 85
++MN SG + + ++ ++ E
Sbjct: 67 WYSPSYMNESGPKLVRQLSSWLSTTQSEVLGRVVRQGDVALPANFGDASGANAEWQLRGV 126
Query: 86 ----------NYLVIHDDLDLDFGTLRLKTGG----GDAGHNGLKSISEKC--------- 122
+++HD+L+ G +R+K GG GH GL S+ E
Sbjct: 127 DPRSLKSFRPTLVILHDELEAPLGKVRVKRGGPEKASLRGHRGLISVMESLRGKGLYPPR 186
Query: 123 ----------GKNYKRLRIGIGRPP--DTAHIIRHVLGNFSSPE 154
G + R+ +GIGRP + +VL ++ E
Sbjct: 187 TGQAAQGANAGLSILRVGVGIGRPSTRTRNDVADYVLTEMNASE 230
>gi|313611261|gb|EFR86032.1| peptidyl-tRNA hydrolase [Listeria monocytogenes FSL F2-208]
Length = 78
Score = 90.8 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 110 AGHNGLKSISEKC-GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARS 168
GHNG+KSI + + + R+R+G+ RP +I +VLG+F E+ ++ I A +
Sbjct: 1 GGHNGMKSIIQHVKTQEFNRIRVGVSRPL-KGEVIHYVLGDFPKAEQPEIIAAIQKSADA 59
Query: 169 LPLLAKREDVSFLNHIVS 186
+ AK + +N
Sbjct: 60 IEDFAKTPFIEVMNKYNQ 77
>gi|70998632|ref|XP_754038.1| peptidyl-tRNA hydrolase [Aspergillus fumigatus Af293]
gi|66851674|gb|EAL92000.1| peptidyl-tRNA hydrolase, putative [Aspergillus fumigatus Af293]
Length = 256
Score = 90.8 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 41/224 (18%), Positives = 72/224 (32%), Gaps = 79/224 (35%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK- 60
+A LGN Y + RH+ G + +D + A + + I K
Sbjct: 15 LFIASLGNM-RLYRQTRHSAGHILLDALVPLLPS-------RAPLVSSRQPSAGPIFYKT 66
Query: 61 --PQTFMNLSG-QSLLEVMNFYKLPNLE-------------------------------- 85
++MN SG + + ++ ++ E
Sbjct: 67 WYSPSYMNESGPKLVRQLSSWLSTTQFEVLGRVVRQGDVALPANFGDASGANAEWQLRGV 126
Query: 86 ----------NYLVIHDDLDLDFGTLRLKTGG----GDAGHNGLKSISEKC--------- 122
+++HD+L+ G +R+K GG GH GL S+ E
Sbjct: 127 DPRSLKSFRPTLVILHDELEAPLGKVRVKRGGPEKASLRGHRGLISVMESLRGKGLYPPR 186
Query: 123 ----------GKNYKRLRIGIGRPP--DTAHIIRHVLGNFSSPE 154
G + R+ +GIGRP + +VL ++ E
Sbjct: 187 TGQAAQGANAGLSILRVGVGIGRPSTRTRNDVADYVLTEMNASE 230
>gi|119498569|ref|XP_001266042.1| peptidyl-tRNA hydrolase, putative [Neosartorya fischeri NRRL 181]
gi|119414206|gb|EAW24145.1| peptidyl-tRNA hydrolase, putative [Neosartorya fischeri NRRL 181]
Length = 256
Score = 90.8 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 44/243 (18%), Positives = 79/243 (32%), Gaps = 83/243 (34%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK- 60
+A LGN Y + RH+ G + +D + + + I K
Sbjct: 15 LFIASLGNM-RPYRQTRHSAGHILLDALVPLLPSRVP-------LVSSRQPSAGPIFYKT 66
Query: 61 --PQTFMNLSG-QSLLEVMNFYKLPNLE-------------------------------- 85
++MN SG + + ++ ++ E
Sbjct: 67 WYSPSYMNESGPKLVRQLGSWLLTTQSEVLGRVVRQGDVALPANFGDASAANAEWQLRGV 126
Query: 86 ----------NYLVIHDDLDLDFGTLRLKTGG----GDAGHNGLKSISEKC-GK------ 124
+++HD+L+ G +++K GG GH GL S+ E GK
Sbjct: 127 DPRSLKSFRPTLVILHDELEAPLGKVKVKRGGPEKASLRGHRGLISVMESLRGKGLYPPR 186
Query: 125 ------------NYKRLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLL----PIIDNIA 166
+ R+ +GIGRP + +VL + E + P++D +A
Sbjct: 187 AGQAAQGANAGLSILRVGVGIGRPSTRTRNDVADYVLTEMDASELAAVRAASVPVLDILA 246
Query: 167 RSL 169
L
Sbjct: 247 DEL 249
>gi|309794294|ref|ZP_07688718.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|308122199|gb|EFO59461.1| conserved hypothetical protein [Escherichia coli MS 145-7]
Length = 71
Score = 90.4 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 28/66 (42%)
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLN 182
N+ RLRIGIG P D ++ VLG E+ + ID AR + N
Sbjct: 4 NPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLTKATN 63
Query: 183 HIVSVR 188
+ + +
Sbjct: 64 RLHAFK 69
>gi|134083997|emb|CAK49152.1| unnamed protein product [Aspergillus niger]
Length = 353
Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 48/251 (19%), Positives = 80/251 (31%), Gaps = 82/251 (32%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT--ILI 59
+A +GNP Y RH+ G + ++ + + + +G +
Sbjct: 97 LFIASIGNP-RPYRTTRHSAGHILLEALTPLL------PRRLPLVGASPNNGNIVNPLFY 149
Query: 60 K---PQTFMNLSG----QSLLEVMN------FYKLPNLENYL------------------ 88
K T+MN SG ++ ++ + K+ N L
Sbjct: 150 KTYTSPTYMNESGPKLLRNFQSWLSSTQTEIYQKIVQPGNVLSTNTTPHDAASDAVAEWH 209
Query: 89 -----------------VIHDDLDLDFGTLRLKTGG----GDAGHNGLKSISEKC-GKNY 126
++HD+L+ G +R+K GG GH GL S E GK
Sbjct: 210 LRGTDPTTLRNFSPTLVILHDELEAPLGKVRVKRGGPEKASLRGHRGLISSFESLRGKGL 269
Query: 127 K------------------RLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
R+ +GIGRP D + ++VL S E + +
Sbjct: 270 YPPNPKKNVVGAGVDLSVLRIGVGIGRPETRDRGGVAKYVLEEMSDRELKAVKAAAGPVL 329
Query: 167 RSLPLLAKRED 177
L R+D
Sbjct: 330 EVLMDELYRDD 340
>gi|218681501|ref|ZP_03529388.1| peptidyl-tRNA hydrolase [Rhizobium etli CIAT 894]
Length = 143
Score = 89.3 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 43/71 (60%)
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAK 174
+KS+ CGK Y+RL +GIG P + HVLG+F+ +R +L P+++ +A + +L +
Sbjct: 14 IKSLDAHCGKEYRRLHLGIGHPGVREMVHNHVLGDFAKADRAWLEPLLETLADNADMLVR 73
Query: 175 REDVSFLNHIV 185
ED +N I
Sbjct: 74 NEDSQLMNKIA 84
>gi|121712632|ref|XP_001273927.1| peptidyl-tRNA hydrolase, putative [Aspergillus clavatus NRRL 1]
gi|119402080|gb|EAW12501.1| peptidyl-tRNA hydrolase, putative [Aspergillus clavatus NRRL 1]
Length = 253
Score = 88.9 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 69/221 (31%), Gaps = 79/221 (35%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK- 60
+A +GNP Y + RH+ G + +D + + + I K
Sbjct: 12 LFIASIGNP-RPYRQTRHSAGHILLDALVPLLPTRMP-------LVSARQPSAGPIFYKT 63
Query: 61 --PQTFMNLSG-QSLLEVMNFYKLPNLE-------------------------------- 85
++MN SG + + ++ N+ +
Sbjct: 64 WYSPSYMNESGTKLVRQLKNWMSATQTDVLRGAVQPGDVALPRNLAVPSPEKAEWQVRGV 123
Query: 86 ----------NYLVIHDDLDLDFGTLRLKTGG----GDAGHNGLKSISEKC--------- 122
+++HD+L+ G +++K GG GH GL S E
Sbjct: 124 DPSSLKTFQPTLVILHDELEAPLGKVKVKRGGPEKASLRGHRGLISAMESLRGKGLYPPR 183
Query: 123 ----------GKNYKRLRIGIGRPP--DTAHIIRHVLGNFS 151
G + R+ +GIGRP + +VL +
Sbjct: 184 TGQAAQGVDGGLSVLRVGVGIGRPSTRTRNDVADYVLTEMN 224
>gi|225433776|ref|XP_002268699.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 518
Score = 88.5 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 41 KFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGT 100
A +G + + L P T+MNLSG+S+ + +YKLP L +V HDD L G
Sbjct: 5 HHKAIFGQGFVGDVLVFLANPHTYMNLSGESVGPLAAYYKLP-LNRMVVFHDDKSLPCGV 63
Query: 101 LRLKTGGGDAGHNGLKSISEKCGKNYKRLRIG 132
L L GG HNG + + + R+ G
Sbjct: 64 LCLHHKGGHGSHNGRRIVGFMLIFGFLRVFFG 95
>gi|317036962|ref|XP_001398424.2| peptidyl-tRNA hydrolase [Aspergillus niger CBS 513.88]
Length = 319
Score = 87.8 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 47/253 (18%), Positives = 79/253 (31%), Gaps = 82/253 (32%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRT--ILI 59
+A +GNP Y RH+ G + ++ + + + +G +
Sbjct: 74 LFIASIGNP-RPYRTTRHSAGHILLEALTPLL------PRRLPLVGASPNNGNIVNPLFY 126
Query: 60 K---PQTFMNLSG----QSLLEVMN------FYKLPNLENYL------------------ 88
K T+MN SG ++ ++ + K+ N L
Sbjct: 127 KTYTSPTYMNESGPKLLRNFQSWLSSTQTEIYQKIVQPGNVLSTNTTPHDAASDAVAEWH 186
Query: 89 -----------------VIHDDLDLDFGTLRLKTGG----GDAGHNGLKSISEKC-GKNY 126
++HD+L+ G +R+K GG GH GL S E GK
Sbjct: 187 LRGTDPTTLRNFSPTLVILHDELEAPLGKVRVKRGGPEKASLRGHRGLISSFESLRGKGL 246
Query: 127 K------------------RLRIGIGRPP--DTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
R+ +GIGRP D + ++VL S E + +
Sbjct: 247 YPPNPKKNVVGAGVDLSVLRIGVGIGRPETRDRGGVAKYVLEEMSDRELKAVKAAAGPVL 306
Query: 167 RSLPLLAKREDVS 179
L R+
Sbjct: 307 EVLMDELYRDGAE 319
>gi|71024435|ref|XP_762447.1| hypothetical protein UM06300.1 [Ustilago maydis 521]
gi|46097696|gb|EAK82929.1| hypothetical protein UM06300.1 [Ustilago maydis 521]
Length = 721
Score = 87.8 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 44/192 (22%), Positives = 67/192 (34%), Gaps = 61/192 (31%)
Query: 42 FHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMN----FYKLP--------------N 83
F + S+ + + L KP MNLSG L + ++ N
Sbjct: 527 FSSHPSDSTIFSVNLCLFKPSHAMNLSGVGLKAFLQTRHPYFASTSHSTPSEHASTGTWN 586
Query: 84 LENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC--------------------- 122
++ LV+ D+LDLDFG+++ K G GHNG++ I +
Sbjct: 587 TDDILVLQDELDLDFGSVKRKDAGSARGHNGVRDIVARLEIPAVSSTTCASTKRTASNGA 646
Query: 123 ---GKNYKRLRIGIGRPPDTA----------------HIIRHVLGNFSSPERYFLLPII- 162
G RLRIGIGRP + + R VL + E
Sbjct: 647 EASGPKLTRLRIGIGRPSHSTPKDIWLPASLQSKKAPRVDRWVLSPLTPAELESCRNASQ 706
Query: 163 --DNIARSLPLL 172
D++ + L
Sbjct: 707 RHDSVIDHVETL 718
Score = 36.5 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 9/36 (25%)
Query: 2 FIVAGLGN----PGHEYCENRHNIGFMCIDRIHSFH 33
++ GLGN P RH+IG + +D +
Sbjct: 395 LVIVGLGNATTHP-----LTRHSIGQVVLDPLLQRL 425
>gi|254429300|ref|ZP_05043007.1| hypothetical protein ADG881_2530 [Alcanivorax sp. DG881]
gi|196195469|gb|EDX90428.1| hypothetical protein ADG881_2530 [Alcanivorax sp. DG881]
Length = 112
Score = 86.6 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 65 MNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCG- 123
MN GQ+ ++NF+ +P + L+ HD+LDL G R GGG GHNGL+ I + G
Sbjct: 1 MNRGGQATAALVNFFPIP-VTQMLIAHDELDLPPGCARFNQGGGHGGHNGLRDIISRHGN 59
Query: 124 -KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYF 157
+++ RLR+GI P + HVL S +R
Sbjct: 60 SRDFYRLRVGIRHPGSADRVTPHVLNKPSKADRDL 94
>gi|207110550|ref|ZP_03244712.1| peptidyl-tRNA hydrolase [Helicobacter pylori HPKX_438_CA4C1]
Length = 98
Score = 85.8 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/102 (46%), Positives = 63/102 (61%), Gaps = 7/102 (6%)
Query: 34 FFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDD 93
A+ K +A + + I +KPQT+MNLSG+S+L NFYK + L++HDD
Sbjct: 1 LSFAFSPKHNAYLCVYK----DFIFLKPQTYMNLSGESVLSAKNFYK---TKELLIVHDD 53
Query: 94 LDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGR 135
LDL G +R K GGG+ GHNGLKSI C +Y RLR+GI +
Sbjct: 54 LDLPLGVVRFKNGGGNGGHNGLKSIDLLCSNSYYRLRVGISK 95
>gi|225685031|gb|EEH23315.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 276
Score = 85.1 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 49/261 (18%), Positives = 79/261 (30%), Gaps = 94/261 (36%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF--------------FPAWKKKFHAEIS 47
+A +GNP + + H+ G + + RI S H P + +
Sbjct: 7 LFLASIGNPPPRWHKTLHSAGHILL-RILSQHLKAPLQPLSPYSIPSHPPPRDYPGPYTA 65
Query: 48 EGQLDGLRTIL--IKPQTFMNLSGQSLLEVMNFYKL------------------------ 81
QL T L + T MN+SG +L+ +
Sbjct: 66 RAQLPNSDTHLTLWQSPTVMNVSGPALVRAYEKWCAQNGGRGPIVGAVANANASITNPDR 125
Query: 82 ----------PNLENYLVIHDDLDLDFGTLRLKTGG---GDAGHNGLKSISEKCGK---- 124
P N +++HDDL+L G L ++ GG GHNG+KS+ K
Sbjct: 126 QKDNARDESNPIPLNLVLLHDDLELSPGKLSVRRGGASLSARGHNGVKSVVNSLVKAGML 185
Query: 125 ----------------------------------NYKRLRIGIGRPPDTAH--IIRHVLG 148
R+ +GIGRP + +VLG
Sbjct: 186 ASTRGPGKEKGTGVGMSGILGAGSSASAFDPTRFQLTRIGVGIGRPASREPAEVAEYVLG 245
Query: 149 NFSSPERYFLLPIIDNIARSL 169
+ ++ + L
Sbjct: 246 RMPDRQVEVTEGLVGKLVEIL 266
>gi|297745170|emb|CBI39162.3| unnamed protein product [Vitis vinifera]
Length = 92
Score = 83.9 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 41 KFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGT 100
A +G + + L P T+MNLSG+S+ + +YKLP L +V HDD L G
Sbjct: 5 HHKAIFGQGFVGDVLVFLANPHTYMNLSGESVGPLAAYYKLP-LNRMVVFHDDKSLPCGV 63
Query: 101 LRLKTGGGDAGHNGLK 116
L L GG HNG +
Sbjct: 64 LCLHHKGGHGSHNGYE 79
>gi|226294342|gb|EEH49762.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 282
Score = 83.5 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/261 (18%), Positives = 81/261 (31%), Gaps = 94/261 (36%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHF--------------FPAWKKKFHAEIS 47
+A +GNP + + H+ G + + RI S H P + +
Sbjct: 7 LFLASIGNPPPRWHKTLHSAGHILL-RILSQHLKAPLQPLSPYSIPSHPPPRDYPGPYTA 65
Query: 48 EGQLDGLRTIL--IKPQTFMNLSGQSLLEVMNFYK-------------------LPNLE- 85
QL T L + T MN+SG +L+ + + N +
Sbjct: 66 RAQLPNSDTHLTLWQSPTVMNVSGPTLVRAYEKWCAQNGGRGPIVGAVANANASITNPDR 125
Query: 86 --------------NYLVIHDDLDLDFGTLRLKTGG---GDAGHNGLKSISEKCGK---- 124
N +++HDDL+L G L ++ GG GHNG+KS+ K
Sbjct: 126 QKDNARDESNSIPLNLILLHDDLELSPGKLSVRRGGASLSARGHNGVKSVVNSLVKAGML 185
Query: 125 ----------------------------------NYKRLRIGIGRPPDTAH--IIRHVLG 148
R+ +GIGRP + +VLG
Sbjct: 186 ASTRGAGKEKGTGVGMSGILGAGSSASAFDPTRFQLTRIGVGIGRPASREPAEVAEYVLG 245
Query: 149 NFSSPERYFLLPIIDNIARSL 169
+ ++ + L
Sbjct: 246 RMPDRQVEVTEGLVGKLVEIL 266
>gi|239608962|gb|EEQ85949.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 285
Score = 82.7 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 79/271 (29%), Gaps = 102/271 (37%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH-------------SFHFFPAWKKKFHAEISE 48
+A +GNP + + H+ G + + + S P + S
Sbjct: 6 LFLASIGNPPPRWHKTLHSAGHILLRALAQHLDAPLQPIPPYSLTSNPPPRDHPGPYTSR 65
Query: 49 GQLDGLR--TILIKPQTFMNLSGQSLLEVMNFYK-------------------------- 80
QL R L + + MN+SG +L+ ++
Sbjct: 66 TQLPRTRTPLTLWQSPSLMNVSGPTLIRTYEKWRAERGGGIGGDVGLSLKSSAATTNIIH 125
Query: 81 -----------------------LPNLENYLVIHDDLDLDFGTLRLKTGG---GDAGHNG 114
P N +++HDDL+L G L ++ GG GHNG
Sbjct: 126 EDGLGQTQSQSQSETKRTAKDTNKPIPLNLILLHDDLELSPGKLSVRRGGASLSARGHNG 185
Query: 115 LKSISEKCGK---------------------------------NYKRLRIGIGRPPDTAH 141
+KS+ K R+ +GIGRP
Sbjct: 186 IKSVVSSLVKAGMLAPARGAAKKMKGGGGSAVSSAGALDPTRFQLTRIGVGIGRPASREP 245
Query: 142 --IIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ +VLG + +++ + L
Sbjct: 246 EEVAEYVLGRMPDRQVEVTEGLVEELVGILE 276
>gi|261189472|ref|XP_002621147.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239591724|gb|EEQ74305.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
Length = 285
Score = 82.7 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 79/271 (29%), Gaps = 102/271 (37%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH-------------SFHFFPAWKKKFHAEISE 48
+A +GNP + + H+ G + + + S P + S
Sbjct: 6 LFLASIGNPPPRWHKTLHSAGHILLRALAQHLDAPLQPIPPYSLTSNPPPRDHPGPYTSR 65
Query: 49 GQLDGLR--TILIKPQTFMNLSGQSLLEVMNFYK-------------------------- 80
QL R L + + MN+SG +L+ ++
Sbjct: 66 TQLPRTRTPLTLWQSPSLMNVSGPTLIRTYEKWRAERGGGIGGDVGLSLKSSATTTNIIH 125
Query: 81 -----------------------LPNLENYLVIHDDLDLDFGTLRLKTGG---GDAGHNG 114
P N +++HDDL+L G L ++ GG GHNG
Sbjct: 126 EDGLGQTQSQSQSETKRTAKDTNKPIPLNLILLHDDLELSPGKLSVRRGGASLSARGHNG 185
Query: 115 LKSISEKCGK---------------------------------NYKRLRIGIGRPPDTAH 141
+KS+ K R+ +GIGRP
Sbjct: 186 IKSVVSSLVKAGMLAPARGAAKKMKGGGGSAVSSAGALDPTRFQLTRIGVGIGRPASREP 245
Query: 142 --IIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ +VLG + +++ + L
Sbjct: 246 EEVAEYVLGRMPDRQVEVTEGLVEELVGILE 276
>gi|241950859|ref|XP_002418152.1| peptidyl-tRNA hydrolase, putative [Candida dubliniensis CD36]
gi|223641491|emb|CAX43452.1| peptidyl-tRNA hydrolase, putative [Candida dubliniensis CD36]
Length = 242
Score = 82.7 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 71/177 (40%), Gaps = 26/177 (14%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFM 65
+GNPG RH++G + R+ F + ++ S I IK T+M
Sbjct: 12 SIGNPGPI---TRHSVGHFMLKRLMEFSNSSIKQLHNYSLYSLSIDSLNNIIYIKSNTYM 68
Query: 66 NLSGQSLLEV-----MNFYKLPNLENYLVIHDDLDLDFGTLRL-------KTGGGDAGHN 113
N S ++ + + + +V++DD + + GT++L + HN
Sbjct: 69 NESSKAWNKFKSSKEYKSFLKQQVVTVIVLYDDFENNLGTIKLKQFKKNKSNKNNNESHN 128
Query: 114 GLKSIS-EKCGKNY-----KRLRIGIG-RP---PDTAHIIRHVLGNFSS-PERYFLL 159
GLK + N+ L IGIG +P P+ + + +L F+ E+ L
Sbjct: 129 GLKDLKFAMIDNNFNDETIYLLGIGIGPKPSSNPNGEIMKQWILSPFNKQSEKIKLE 185
>gi|327354020|gb|EGE82877.1| hypothetical protein BDDG_05821 [Ajellomyces dermatitidis ATCC
18188]
Length = 285
Score = 82.0 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 78/271 (28%), Gaps = 102/271 (37%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIH-------------SFHFFPAWKKKFHAEISE 48
+A +GNP + + H+ G + + + S P + S
Sbjct: 6 LFLASIGNPPPRWHKTLHSAGHILLRALAQHLDAPLQPIPPYSLTSNPPPRDHPGPYTSR 65
Query: 49 GQLDGLR--TILIKPQTFMNLSGQSLLEVMNFYK-------------------------- 80
L R L + + MN+SG +L+ ++
Sbjct: 66 THLPRTRTPLTLWQSPSLMNVSGPTLIRTYEKWRAERGGGIGGDVGLSLKSSAATTNIIH 125
Query: 81 -----------------------LPNLENYLVIHDDLDLDFGTLRLKTGG---GDAGHNG 114
P N +++HDDL+L G L ++ GG GHNG
Sbjct: 126 EDGLGQIQSQSQSETKRTAKDTNKPIPLNLILLHDDLELSPGKLSVRRGGASLSARGHNG 185
Query: 115 LKSISEKCGK---------------------------------NYKRLRIGIGRPPDTAH 141
+KS+ K R+ +GIGRP
Sbjct: 186 IKSVVSSLVKAGMLAPARGAAKKMKGGGGSAVSSAGALDPTRFQLTRIGVGIGRPASREP 245
Query: 142 --IIRHVLGNFSSPERYFLLPIIDNIARSLP 170
+ +VLG + +++ + L
Sbjct: 246 EEVAEYVLGRMPDRQVEVTEGLVEELVGILE 276
>gi|295660499|ref|XP_002790806.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
gi|226281359|gb|EEH36925.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
Length = 280
Score = 82.0 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 46/266 (17%), Positives = 77/266 (28%), Gaps = 98/266 (36%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEI--------------- 46
+A +GNP + + H+ G + + RI S H + I
Sbjct: 7 LFLASIGNPPPRWHKTLHSAGHILL-RILSQHLKAPLQPVSPYSIPSHPPPRDYPGPYTA 65
Query: 47 -SEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKL------------------------ 81
++ L + T MN+SG +L+ +
Sbjct: 66 GAKLPNTDTHLTLWQSPTLMNVSGPTLVRTYEKWCARRGGRGPIVGAVANASANASANIT 125
Query: 82 --------------PNLENYLVIHDDLDLDFGTLRLKTGG---GDAGHNGLKSISEKCGK 124
P N +++HDDL+L G L ++ GG GHNG+KS+ K
Sbjct: 126 NPDRQKDNARDESNPIPLNLILLHDDLELSPGKLSVRRGGASLSARGHNGIKSVVNSLVK 185
Query: 125 --------------------------------------NYKRLRIGIGRPPDTA--HIIR 144
R+ +GIGRP +
Sbjct: 186 AGMLASTRGAGKKKGAGVGMGGILGAGLSASAVDPTRFQLTRIGVGIGRPASREPADVAE 245
Query: 145 HVLGNFSSPERYFLLPIIDNIARSLP 170
+VLG + ++ + L
Sbjct: 246 YVLGRMPDRQVEVTEGLVGKLVEILE 271
>gi|331226414|ref|XP_003325877.1| hypothetical protein PGTG_07079 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309304867|gb|EFP81458.1| hypothetical protein PGTG_07079 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 252
Score = 82.0 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 50/218 (22%), Positives = 75/218 (34%), Gaps = 68/218 (31%)
Query: 3 IVAGLGNPGHEYCE--NRHNIGFMCIDRIHSFHFF------------------------- 35
+V GLGN Y RH+I + ++ IH+
Sbjct: 7 LVVGLGN----YTHPLTRHSISQLTLENIHNLLNHHHRYNVNSVASAFPSSPSSHEEALS 62
Query: 36 ---------------------PAW--KKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSL 72
AW K F + ++ L L+KP+ MN+SG +
Sbjct: 63 RLQSVQSGSDLSNHLKLSKPNSAWIAKHDFQSFNGTSPIN-LTLHLLKPRAAMNISGPIV 121
Query: 73 LEV-MNFYKLPNLENYLVIHDDLDLDFGTLRLK---TGGGDAGHNGLKSISEKCG----K 124
K + ++IHD+LDL +RLK GHNGL+S+ +
Sbjct: 122 QSYHSQLSKSGHPTKLIIIHDELDLKPLVVRLKRPPQSSKHKGHNGLRSVFASLRAYSPQ 181
Query: 125 NYKRLRIGIGRP-----PDTAHIIRHVLGNFSSPERYF 157
N + IG+GR D + R VL + PE
Sbjct: 182 NLYTIGIGVGRDVSNPSKDPGDVGRWVLSPLTRPEIEA 219
>gi|289609005|emb|CBI60512.1| unnamed protein product [Sordaria macrospora]
Length = 87
Score = 80.8 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 31 SFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVI 90
H F A K+ F I EG++ + +L+KP T+MN SG+S+ E M FYKL + V
Sbjct: 17 QVHGFAAPKRAFQGWIQEGRIGTQKILLLKPGTYMNESGRSVGEAMRFYKL-TAADVTVF 75
Query: 91 HDDLDLDFGTLR 102
HD+LDL L+
Sbjct: 76 HDELDLAPLKLK 87
>gi|294671341|ref|ZP_06736192.1| hypothetical protein NEIELOOT_03050 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291306973|gb|EFE48216.1| hypothetical protein NEIELOOT_03050 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 61
Score = 79.7 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK 41
++ GLGNPG EY RHN GF +D + +K
Sbjct: 4 KLIVGLGNPGTEYEHTRHNAGFWFLDELARQWKAVWKHEK 43
>gi|269214290|ref|ZP_06158479.1| aminoacyl-tRNA hydrolase [Neisseria lactamica ATCC 23970]
gi|269210126|gb|EEZ76581.1| aminoacyl-tRNA hydrolase [Neisseria lactamica ATCC 23970]
Length = 69
Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKK 41
+V GLGNPG EY + RHN GF +D + ++K
Sbjct: 6 KMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEEK 45
>gi|71899975|ref|ZP_00682121.1| peptidyl tRNA hydrolase [Xylella fastidiosa Ann-1]
gi|71730262|gb|EAO32347.1| peptidyl tRNA hydrolase [Xylella fastidiosa Ann-1]
Length = 75
Score = 78.1 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 115 LKSISEKCGKN-YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
++ I++ G + RLR+GIG P ++ VLG + E + ++ + LPL
Sbjct: 1 MRDITKLLGHGRFHRLRVGIGHPGHKDRVVSWVLGCPTCDENIAIDAALERASVVLPLAV 60
Query: 174 KREDVSFLNHIVSV 187
+ + + +V
Sbjct: 61 AGDFDGAMKKLHTV 74
>gi|68466705|ref|XP_722548.1| hypothetical protein CaO19.1502 [Candida albicans SC5314]
gi|46444531|gb|EAL03805.1| hypothetical protein CaO19.1502 [Candida albicans SC5314]
Length = 255
Score = 77.7 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 38/189 (20%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG-LRTILIKPQTF 64
+GNPG RH++G + R+ + K+ + +D I IK T+
Sbjct: 13 SIGNPGPI---TRHSVGHFMLKRLMESSSTTSIKQLSNYSSYSLSVDSFNNIIYIKSNTY 69
Query: 65 MNLSGQSL------LEVMNFYK----------LPNLENYLVIHDDLDLDFGTLRLK--TG 106
MN S ++ E +F K + + ++++DD + + GT++LK
Sbjct: 70 MNESSKAWNKFKLSKEYRSFIKEQDQDQDQDHHDQIVSVIILYDDFENNLGTIKLKQFKK 129
Query: 107 GGDA--GHNGLKSI---------SEKCGKNYKRLRIGIGRPPDTAH----IIRHVLGNFS 151
+ HNGLK++ S G+ L IGIG P+ + + +L F+
Sbjct: 130 KSNNNESHNGLKNLKLSMIDGNSSNATGEAIYLLGIGIGPKPNNNPSGEIMRQWILSPFN 189
Query: 152 S-PERYFLL 159
E+Y L
Sbjct: 190 KQSEKYKLE 198
>gi|238881992|gb|EEQ45630.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 255
Score = 77.7 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/189 (22%), Positives = 76/189 (40%), Gaps = 38/189 (20%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG-LRTILIKPQTF 64
+GNPG RH++G + R+ + K+ + +D I IK T+
Sbjct: 13 SIGNPGPI---TRHSVGHFMLKRLMESSSTTSIKQLSNYSSYSLSVDSFNNIIYIKSNTY 69
Query: 65 MNLSGQSL------LEVMNFYK----------LPNLENYLVIHDDLDLDFGTLRLK--TG 106
MN S ++ E +F K + + ++++DD + + GT++LK
Sbjct: 70 MNESSKAWNKFKLSKEYRSFIKEQDQDQDQDHHDQIVSVIILYDDFENNLGTIKLKQFKK 129
Query: 107 GGDA--GHNGLKSIS---------EKCGKNYKRLRIGIGRPPDTAH----IIRHVLGNFS 151
+ HNGLK++ G+ L IGIG P+ + + +L F+
Sbjct: 130 KSNNNESHNGLKNLKLSMIDGNSNNATGEAMYLLGIGIGPKPNNNPSGEIMRQWILSPFN 189
Query: 152 S-PERYFLL 159
E+Y L
Sbjct: 190 KQSEKYKLE 198
>gi|255724094|ref|XP_002546976.1| predicted protein [Candida tropicalis MYA-3404]
gi|240134867|gb|EER34421.1| predicted protein [Candida tropicalis MYA-3404]
Length = 217
Score = 77.4 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/189 (22%), Positives = 70/189 (37%), Gaps = 29/189 (15%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFH-FFPAWKKKFHAEISEGQLDGLRTILIKPQTF 64
+GNPG RH++G + + I SF + P KK IS +K ++
Sbjct: 10 SIGNPGPI---TRHSVGHLMLKHILSFIPYTPGLIKKSIYSISSTD----SITYLKSNSY 62
Query: 65 MNLSGQSLLEVM--NFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC 122
MN S +S + N + +I+DD + + G +R+ + HNGLK +
Sbjct: 63 MNESFKSWNKFKIDNKRLINAGPIIFIIYDDFEKNLGNIRISKFKKNESHNGLKGLKNVF 122
Query: 123 GK-------------NYKRLRIGIGRPP---DTAHIIRHVLGNFSSPERYFLLPIIDNIA 166
+ L IGIG P + + +L F E+ L +
Sbjct: 123 NNDNNNNNNSNNDNIDVYLLGIGIGPKPQGANKETMSNWILSGFKMEEKMKLE---NETV 179
Query: 167 RSLPLLAKR 175
L L +
Sbjct: 180 ELLELYIRE 188
>gi|218197382|gb|EEC79809.1| hypothetical protein OsI_21248 [Oryza sativa Indica Group]
gi|222632792|gb|EEE64924.1| hypothetical protein OsJ_19784 [Oryza sativa Japonica Group]
Length = 125
Score = 77.0 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 40/105 (38%), Gaps = 1/105 (0%)
Query: 72 LLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRI 131
+ + +YKLP L LV D DL G LRL+ GG HNG C
Sbjct: 21 VGPLAAYYKLP-LNRVLVAFDGTDLPCGILRLQPKGGFGRHNGSVDFVTMCFNEVICHSK 79
Query: 132 GIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKRE 176
GIG PP VL F+ + I+ L L+ +
Sbjct: 80 GIGCPPGQMDPKAFVLQKFNKTSLERIDSAIEEGVEILKLVVTKG 124
>gi|406431|gb|AAD12470.1| unknown [Mycoplasma genitalium]
Length = 116
Score = 77.0 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 73 LEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKC-GKNYKRLRI 131
+ + +++P L N +++HD++ D G +RLK G HNG+KS+ + + RLR
Sbjct: 1 KWLQDHFQIP-LANIMIVHDEIAFDLGVIRLKMQGSANNHNGIKSVIRHLDTEQFNRLRF 59
Query: 132 GIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVS 179
GI + + V+ F + E L I L + E++
Sbjct: 60 GIKSQNTSNILHEQVMSEFQNSELTKLEVAITKSVELLKRYIEGEELQ 107
>gi|68466990|ref|XP_722410.1| hypothetical protein CaO19.9078 [Candida albicans SC5314]
gi|46444384|gb|EAL03659.1| hypothetical protein CaO19.9078 [Candida albicans SC5314]
Length = 255
Score = 77.0 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/189 (22%), Positives = 76/189 (40%), Gaps = 38/189 (20%)
Query: 6 GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDG-LRTILIKPQTF 64
+GNPG RH++G + R+ + K+ + +D I IK T+
Sbjct: 13 SIGNPGPI---TRHSVGHFMLKRLMESSSTTSIKQLSNYSSYSLSVDSFNNIIYIKSNTY 69
Query: 65 MNLSGQSL------LEVMNFYK----------LPNLENYLVIHDDLDLDFGTLRLK--TG 106
MN S ++ E +F K + + ++++DD + + GT++LK
Sbjct: 70 MNESSKAWNKFKLSKEYRSFIKEQDQDQDQDHHDQIVSVIILYDDFENNLGTIKLKQFKK 129
Query: 107 GGDA--GHNGLKSIS---------EKCGKNYKRLRIGIGRPPDTAH----IIRHVLGNFS 151
+ HNGLK++ G+ L IGIG P+ + + +L F+
Sbjct: 130 KSNNNESHNGLKNLKLSMIDGNSNNATGEAIYLLGIGIGPKPNNNPSGEIMRQWILSPFN 189
Query: 152 S-PERYFLL 159
E+Y L
Sbjct: 190 KQSEKYKLE 198
>gi|330955812|gb|EGH56072.1| peptidyl-tRNA hydrolase [Pseudomonas syringae Cit 7]
Length = 69
Score = 76.2 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 124 KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNH 183
+ RLR+GIG P D + + VLG E+ L ID LP + E + +
Sbjct: 4 NTFHRLRLGIGHPGDASKVSGFVLGRAPRAEQEKLDASIDFALGVLPDIFAGEWNRAMKN 63
Query: 184 IVSVR 188
+ S +
Sbjct: 64 LHSQK 68
>gi|222632463|gb|EEE64595.1| hypothetical protein OsJ_19447 [Oryza sativa Japonica Group]
Length = 90
Score = 75.4 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEG 49
+++ GLGNPG Y RHN+GF ID I K+F + + +
Sbjct: 41 WLLIGLGNPGRMYKGTRHNVGFEMIDAIAEAEGISVSSKQFKSMVGKV 88
>gi|87122996|ref|ZP_01078856.1| peptidyl-tRNA hydrolase [Marinomonas sp. MED121]
gi|86161733|gb|EAQ63038.1| peptidyl-tRNA hydrolase [Marinomonas sp. MED121]
Length = 59
Score = 75.4 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSF-HFFPAWKKKFHAEISEGQLDGLR 55
++ GLGNPG EY RHN G I+ + +KKF + + + G
Sbjct: 5 KLLVGLGNPGSEYENTRHNAGAQLIETLAQQSQCTLKNEKKFFGQFGKVYIGGQE 59
>gi|256751657|ref|ZP_05492532.1| peptidyl-tRNA hydrolase [Thermoanaerobacter ethanolicus CCSD1]
gi|256749466|gb|EEU62495.1| peptidyl-tRNA hydrolase [Thermoanaerobacter ethanolicus CCSD1]
Length = 71
Score = 74.3 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 115 LKSISEKCG-KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
+ SI + + R+RIGIG+P ++ HVLG F E+ + + A ++ +
Sbjct: 1 MNSIIYLLNSEEFPRVRIGIGKP--QKDLVSHVLGKFEESEKKLIDEAVIKAADAVIDII 58
Query: 174 KREDVSFLNHIV 185
+ ++
Sbjct: 59 ENGIEHAMSKFN 70
>gi|238503468|ref|XP_002382967.1| peptidyl-tRNA hydrolase, putative [Aspergillus flavus NRRL3357]
gi|220690438|gb|EED46787.1| peptidyl-tRNA hydrolase, putative [Aspergillus flavus NRRL3357]
Length = 166
Score = 73.5 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 87 YLVIHDDLDLDFGTLRLKTGG----GDAGHNGLKSISEKC-GKNYKRLRIGIGRPP--DT 139
+++HD+L+ G +R+K GG GH GL SI E GK R+GIGRP +
Sbjct: 66 LVILHDELEAPLGKVRVKRGGPETASLRGHRGLTSIMESLRGKGLHPPRVGIGRPSTRNR 125
Query: 140 AHIIRHVLGNFSSPERYFLL----PIIDNIARSL 169
+ +VL ++ E + P++D +A +
Sbjct: 126 GDVADYVLTEMNAIELAAVRAAAGPVLDILADEI 159
>gi|213615579|ref|ZP_03371405.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 85
Score = 72.3 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 111 GHNGLKSISEKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYF 157
GHNGLK I K G N + RLR+GIG P D ++ VLG E+
Sbjct: 1 GHNGLKDIISKLGNNPNFHRLRVGIGHPGDKNKVVGFVLGKPPVSEQKI 49
>gi|323706687|ref|ZP_08118195.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323533967|gb|EGB23810.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 38
Score = 71.6 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW 38
M+IV GLGNPG EY + RHN+GF ID +
Sbjct: 1 MYIVVGLGNPGKEYEKTRHNVGFEVIDSLSKKLDIAVK 38
>gi|242793855|ref|XP_002482250.1| peptidyl-tRNA hydrolase, putative [Talaromyces stipitatus ATCC
10500]
gi|218718838|gb|EED18258.1| peptidyl-tRNA hydrolase, putative [Talaromyces stipitatus ATCC
10500]
Length = 258
Score = 70.4 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 23/118 (19%)
Query: 87 YLVIHDDLDLDFGTLRLKTGG----GDAGHNGLKSISEKCGK---------------NYK 127
+++HD+L+ G ++++ G GH GL SI E
Sbjct: 141 LVILHDELEARPGQIKIRREGPQQASVRGHKGLISIMESLRGAGLLSSSSSASKKSMAIL 200
Query: 128 RLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARSL--PLLAKREDVSFL 181
R+ +GIGRP + +VL N E L + + L + + +D +
Sbjct: 201 RIGVGIGRPESRERNAVADYVLSNMGVQEMQALREAVPEVVEVLVQEMYRRDDDEIAI 258
>gi|325091808|gb|EGC45118.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 303
Score = 69.6 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 46/134 (34%), Gaps = 39/134 (29%)
Query: 76 MNFYKLPNLENYLVIHDDLDLDFGTLRLKTGG---GDAGHNGLKSISEKCGK-------- 124
P N +++HDDL+L G L ++ GG GHNG+KS+ K
Sbjct: 161 AKDSHKPIPLNLILLHDDLELSPGKLSVRRGGASLSARGHNGIKSVVNSLVKAGMLSPAR 220
Query: 125 --------------------------NYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERY 156
R+ +GIGRP + +VLG +
Sbjct: 221 GAGKKKGGSSGGVVVGNVGALDPTRFQLTRIGVGIGRPASREPEEVAEYVLGRMPDRQME 280
Query: 157 FLLPIIDNIARSLP 170
+++ + R L
Sbjct: 281 VTAGLVEELVRILE 294
Score = 45.8 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 15/97 (15%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-------------KKKFHAEISE 48
VA +GNP + + H+ G + + + P + S
Sbjct: 7 LFVASIGNPPPRWHKTLHSAGHILLRALAEHLDAPLQPMAPYSLPANPPPRDYPGPFTSP 66
Query: 49 GQLDG--LRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
QL L + T MN+SG +L+ + +
Sbjct: 67 TQLPSTHTPLFLWQSPTLMNISGPTLVRAYEKWCVEK 103
>gi|240277276|gb|EER40785.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 301
Score = 69.6 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 46/134 (34%), Gaps = 39/134 (29%)
Query: 76 MNFYKLPNLENYLVIHDDLDLDFGTLRLKTGG---GDAGHNGLKSISEKCGK-------- 124
P N +++HDDL+L G L ++ GG GHNG+KS+ K
Sbjct: 159 AKDSHKPIPLNLILLHDDLELSPGKLSVRRGGASLSARGHNGIKSVVNSLVKAGMLSPAR 218
Query: 125 --------------------------NYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERY 156
R+ +GIGRP + +VLG +
Sbjct: 219 GAGKKKGGSSGGVVVGNVGALDPTRFQLTRIGVGIGRPASREPEEVAEYVLGRMPDRQME 278
Query: 157 FLLPIIDNIARSLP 170
+++ + R L
Sbjct: 279 VTAGLVEELVRILE 292
Score = 45.8 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 15/97 (15%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-------------KKKFHAEISE 48
VA +GNP + + H+ G + + + P + S
Sbjct: 7 LFVASIGNPPPRWHKTLHSAGHILLRALAEHLDAPLQPMAPYSLPANPPPRDYPGPFTSP 66
Query: 49 GQLDG--LRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
QL L + T MN+SG +L+ + +
Sbjct: 67 TQLPSTHTPLFLWQSPTLMNISGPTLVRAYEKWCVEK 103
>gi|225562189|gb|EEH10469.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 305
Score = 69.6 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 46/134 (34%), Gaps = 39/134 (29%)
Query: 76 MNFYKLPNLENYLVIHDDLDLDFGTLRLKTGG---GDAGHNGLKSISEKCGK-------- 124
P N +++HDDL+L G L ++ GG GHNG+KS+ K
Sbjct: 163 AKDSHKPIPLNLILLHDDLELSPGKLSVRRGGASLSARGHNGIKSVVNSLVKAGMLSPAR 222
Query: 125 --------------------------NYKRLRIGIGRPPDTAH--IIRHVLGNFSSPERY 156
R+ +GIGRP + +VLG +
Sbjct: 223 GAGKKKGGSSGGVVVGNVGALDPTRFQLTRIGVGIGRPASREPEEVAEYVLGRMPDRQME 282
Query: 157 FLLPIIDNIARSLP 170
+++ + R L
Sbjct: 283 VTAGLVEELVRILE 296
Score = 45.8 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 15/97 (15%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAW-------------KKKFHAEISE 48
VA +GNP + + H+ G + + + P + S
Sbjct: 7 LFVASIGNPPPRWHKTLHSAGHILLRALAEHLDAPLQPMAPYSLPANPPPRDYPGPFTSP 66
Query: 49 GQLDG--LRTILIKPQTFMNLSGQSLLEVMNFYKLPN 83
QL L + T MN+SG +L+ + +
Sbjct: 67 TQLPSTHTPLFLWQSPTLMNISGPTLVRAYEKWCVEK 103
>gi|169835715|ref|ZP_02868903.1| peptidyl-tRNA hydrolase [candidate division TM7 single-cell isolate
TM7a]
Length = 93
Score = 68.5 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 97 DFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGI-GRPPDTAHIIRHVLGNFSSPER 155
DFG LR++ G DAG+NG+KS++ GK++ RLRIGI + H VL F+ E
Sbjct: 3 DFGKLRIRLSGRDAGNNGVKSLNAHLGKDFARLRIGIYTILRNKIHDKDFVLKKFTKDEI 62
Query: 156 YFLLP-IIDNIARSLPLLAKREDV 178
+ II + +
Sbjct: 63 QLIEEKIIPQSIKIIHDFINDNLE 86
>gi|255943795|ref|XP_002562665.1| Pc20g01040 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587400|emb|CAP85433.1| Pc20g01040 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 264
Score = 67.0 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/233 (19%), Positives = 73/233 (31%), Gaps = 77/233 (33%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ +A +GNP Y RH+ G + GL +
Sbjct: 38 LLFIASIGNP-APYYNTRHSAGH------------LLLDALKPLLETTLPNTGLYHETWQ 84
Query: 61 PQTFMNLSGQSLLEVMNFYKLPNLENY--------------------------------- 87
T MN++G L+ + +
Sbjct: 85 SPTQMNITGPKLVRRLEQWATERASRLERIANVAATRASTSSSSSQPPNLPAQTTYPTTL 144
Query: 88 LVIHDDLDLDFGTLRLKTGG----GDAGHNGLKSISEKCGKN--YKR------------- 128
+++HD+L + G +R+ GG GH GL SI + K Y R
Sbjct: 145 IILHDELSIAQGKVRVVRGGPESLSLRGHRGLISICDTLRKKGLYPRSSGASKGVTGPLA 204
Query: 129 ----LRI--GIGRPP--DTAHIIRHVLGNFSSPERYFL----LPIIDNIARSL 169
LR+ GIGRP +TA + +VL + E P+++ I L
Sbjct: 205 DLSILRVGLGIGRPSSHETAAVSDYVLKTVTDKELKAYHAAAAPVVETIRDEL 257
>gi|51854332|gb|AAU10712.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 154
Score = 66.6 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 42/125 (33%), Gaps = 21/125 (16%)
Query: 72 LLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRI 131
+ + +YKLP L LV D DL G LRL+ GG HNG C
Sbjct: 30 VGPLAAYYKLP-LNRVLVAFDGTDLPCGILRLQPKGGFGRHNGSVDFVTMCFNEVICHSK 88
Query: 132 GIGRPPDTAHIIRHVLGNFSSP--ERY------------------FLLPIIDNIARSLPL 171
GIG PP VL F+ ER + I+ L L
Sbjct: 89 GIGCPPGQMDPKAFVLQKFNKTSLERIHMTNSLKPWLYPAYVKTLKIDSAIEEGVEILKL 148
Query: 172 LAKRE 176
+ +
Sbjct: 149 VVTKG 153
>gi|126640883|ref|YP_001083867.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii ATCC 17978]
gi|126386767|gb|ABO11265.1| peptidyl-tRNA hydrolase [Acinetobacter baumannii ATCC 17978]
Length = 44
Score = 64.6 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 8 GNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKK-KF 42
GNPG EY + RHN GF ++++ + KF
Sbjct: 2 GNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKF 37
>gi|258575097|ref|XP_002541730.1| predicted protein [Uncinocarpus reesii 1704]
gi|237901996|gb|EEP76397.1| predicted protein [Uncinocarpus reesii 1704]
Length = 160
Score = 63.9 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 40/134 (29%)
Query: 83 NLENYLVIHDDLDLDFGTLRLKTGG---GDAGHNGLKSISEKC----------------G 123
+ +++HD+L+L G LR++ GG GHNG+KS+++ G
Sbjct: 33 PPLSLILVHDELELAPGELRIRRGGAELSARGHNGIKSVTQSLVKANLLPASSALSKGGG 92
Query: 124 KN-----------YKRLRIGIGRPPDTAH--IIRHVLGNFSSPERYFLLPIIDNIARSLP 170
KN R+ IGIGRP + +VL + + + A++ P
Sbjct: 93 KNGAAEDVGLPPILIRVGIGIGRPASRDPNTVADYVLREMRAAQYQ------ETCAQAAP 146
Query: 171 L--LAKREDVSFLN 182
+ + E V +
Sbjct: 147 FAEILEAEMVRIQS 160
>gi|328908366|gb|EGG28125.1| aminoacyl-tRNA hydrolase [Propionibacterium sp. P08]
Length = 58
Score = 63.9 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 25/58 (43%)
Query: 129 LRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVS 186
+R+G+GRPP VL + +R + + A ++ ++ + + N S
Sbjct: 1 MRVGVGRPPGRQDPADWVLARVPARQRADMDARVALAADAVEMIITQGLAATQNRFNS 58
>gi|323263294|gb|EGA46830.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
Length = 54
Score = 62.7 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 19/52 (36%)
Query: 137 PDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVSVR 188
D ++ VLG E+ + ID AR L K + + + +
Sbjct: 1 GDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTELWFKEGLAKATSRLHTFK 52
>gi|207111342|ref|ZP_03245504.1| peptidyl-tRNA hydrolase [Helicobacter pylori HPKX_438_CA4C1]
Length = 34
Score = 62.3 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCIDRIHSFH 33
M ++ GLGNP Y RHN GF +D + S
Sbjct: 1 MTLLVGLGNPTLRYAHTRHNAGFDILDSLVSEL 33
>gi|238595751|ref|XP_002393859.1| hypothetical protein MPER_06341 [Moniliophthora perniciosa FA553]
gi|215461964|gb|EEB94789.1| hypothetical protein MPER_06341 [Moniliophthora perniciosa FA553]
Length = 120
Score = 61.2 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 3 IVAGLGN---PGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQL----DGLR 55
IV GLGN PG RH++G + ID + + I + ++
Sbjct: 9 IVVGLGNLPLPG-----TRHSLGQLVIDALSDRLGIQMSSDR-KGVIGRDIVTVGETNVQ 62
Query: 56 TILIKPQTFMNLSGQSLL-EVMNFYKLPNLENYLVIHD 92
L K + MN+SG S+ N K N +V+ D
Sbjct: 63 LTLYKSKAAMNISGPSIADAFRNSIKQGTTHNLIVLQD 100
>gi|323706688|ref|ZP_08118196.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum LX-11]
gi|323533968|gb|EGB23811.1| peptidyl-tRNA hydrolase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 45
Score = 60.4 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 57 ILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLR 102
+L KPQTFMN SG+++ ++++FYKLP L N +V++DD DLD G +R
Sbjct: 1 MLQKPQTFMNSSGEAVYDIVDFYKLP-LSNLIVVYDDKDLDVGKIR 45
>gi|76664642|emb|CAI77473.1| peptidyl-tRNA hydrolase [Lactobacillus reuteri]
Length = 26
Score = 58.9 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 1 MFIVAGLGNPGHEYCENRHNIGFMCI 26
M ++ GLGN G Y E RHN GFM +
Sbjct: 1 MKMIVGLGNIGTRYDETRHNTGFMVV 26
>gi|226329837|ref|ZP_03805355.1| hypothetical protein PROPEN_03749 [Proteus penneri ATCC 35198]
gi|225200632|gb|EEG82986.1| hypothetical protein PROPEN_03749 [Proteus penneri ATCC 35198]
Length = 58
Score = 57.3 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 115 LKSISEKCGKN--YKRLRIGIGRPPDTAHIIRHVLGNFSSPERYF 157
LK I K N + RLRIGIG P D ++ VLG E+
Sbjct: 13 LKDIQSKFSNNPNFYRLRIGIGHPGDKNKVVGFVLGKPPMSEQKI 57
>gi|331251156|ref|XP_003338179.1| hypothetical protein PGTG_19787 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309317169|gb|EFP93760.1| hypothetical protein PGTG_19787 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 310
Score = 54.6 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 19/117 (16%)
Query: 53 GLRTILIKPQTFMNLSGQSLLEVMNFY-----KLPNLENYLVIHDDLDLDFGTLRLK--- 104
L L++P+ MN+ L ++ FY K + ++IHD+L+L +++K
Sbjct: 162 DLTLHLLQPRAAMNI----LGPIIQFYHSELSKSGDRTKLIIIHDELELKPLVVQIKRPL 217
Query: 105 TGGGDAGHNGLKSISEKCG----KNYKRLRIGIG---RPPDTAHIIRHVLGNFSSPE 154
G +GL S+ +N + IGIG P R VL + PE
Sbjct: 218 HSSKHKGPHGLGSVFASLRAYSPQNLFHIGIGIGPVVSNPSKDPGKRWVLSPLTRPE 274
>gi|328767654|gb|EGF77703.1| hypothetical protein BATDEDRAFT_91466 [Batrachochytrium
dendrobatidis JAM81]
Length = 350
Score = 51.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 51 LDGLRTILIKP----QTFMNLSGQSLLEVMNFYKLPNLE-NYLVIHDDLDLDFGTLRLKT 105
+ R +++KP M+ + +L +++ + + + +V DD++ + G + + +
Sbjct: 119 MKSYRIVIVKPHKAISGAMDEAVTTLKNILDKFHVEDPSKQLIVCADDVNTNRGGISIHS 178
Query: 106 GGGDAG---HNGLKSISEKC-GKNYKRLRIGIGRPPD--TAHIIRHVLGNFSS--PERYF 157
GG HNG+ ++ ++ + R+G+G+P I R++ NFS E
Sbjct: 179 GGDSRQAHDHNGIGRLATALKSHDFIQFRMGVGKPYSLKGEDIQRYMHTNFSELNREVDL 238
Query: 158 LLPIIDNIARSLPLLAKREDVS 179
+D + ++L A D+
Sbjct: 239 FGYSLDILGQALQDYAAFSDIK 260
>gi|281203890|gb|EFA78086.1| hypothetical protein PPL_08734 [Polysphondylium pallidum PN500]
Length = 246
Score = 50.4 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 58/178 (32%), Gaps = 22/178 (12%)
Query: 4 VA--GLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+ G+GN G +R+++G +D + W +L+KP
Sbjct: 22 IVVFGVGNYGT--ISSRNSVGARTVDYLAKNLKMD-WIDFQDCSTKITYSPENHLLLVKP 78
Query: 62 QTFMNLSGQSL-LEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE 120
T++ + ++ +N+L IH + G + GG + GL ++
Sbjct: 79 DTYLVKDNHEVLSRLIRLMPNIKADNFLAIHYEHLFKLGVVERTHGGRTKHNPGLAGLTN 138
Query: 121 KCGKN-YKRLRIGIGRPPD---------------TAHIIRHVLGNFSSPERYFLLPII 162
Y R+ +GI P + +L F + + ++
Sbjct: 139 VFQTEHYYRVSMGINHPLNDVTFEHTIYSMGSVYGDLQTPFLLNRFPDVQLELVDRVV 196
>gi|262166271|ref|ZP_06034008.1| peptidyl-tRNA hydrolase [Vibrio mimicus VM223]
gi|262025987|gb|EEY44655.1| peptidyl-tRNA hydrolase [Vibrio mimicus VM223]
Length = 45
Score = 49.2 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 147 LGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVSVR 188
LG + E+ L +D R L +L K N + + +
Sbjct: 2 LGKAPAKEQECLDAAVDESVRCLEILMKDGLTKAQNRLHTFK 43
>gi|227509323|ref|ZP_03939372.1| conserved hypothetical protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227191207|gb|EEI71274.1| conserved hypothetical protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 54
Score = 48.5 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 95 DLDFGTLRLKTGGGDAGHNGLKSISEKCGK--NYKRLRIGIGRPPDTAHIIRHVL 147
DL G + K GGG GHNGLK I K G N+ RLRIGIG P D + VL
Sbjct: 1 DLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKIKLS--VL 53
>gi|315179410|gb|ADT86324.1| peptidyl-tRNA hydrolase [Vibrio furnissii NCTC 11218]
Length = 45
Score = 48.1 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 147 LGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVSVR 188
LG + E+ L ++D R L +L K N + + +
Sbjct: 2 LGKAPAKEQECLDAVVDESVRCLDILFKDGLTKAQNRLHTFK 43
>gi|213585142|ref|ZP_03366968.1| peptidyl-tRNA hydrolase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 42
Score = 47.7 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 2 FIVAGLGNPGHEYCENRH 19
++ GL NPG EY RH
Sbjct: 25 KLIVGLANPGAEYAATRH 42
>gi|167945273|ref|ZP_02532347.1| hypothetical protein Epers_01630 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 35
Score = 47.7 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 154 ERYFLLPIIDNIARSLPLLAKREDVSFLNHIVSVR 188
+R + ID A L LL + E +N + S R
Sbjct: 1 QRSEIEDAIDKAADCLELLIQGELPQAMNRLHSSR 35
>gi|207109664|ref|ZP_03243826.1| peptidyl-tRNA hydrolase [Helicobacter pylori HPKX_438_CA4C1]
Length = 54
Score = 46.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 21/48 (43%)
Query: 142 IIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVSVRK 189
+I HVL F E + ++ +L + D + + + +++K
Sbjct: 1 MIEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFNAMQNRFTLKK 48
>gi|169841878|ref|ZP_02874987.1| hypothetical protein cdivTM_32265 [candidate division TM7
single-cell isolate TM7a]
Length = 18
Score = 45.0 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 1 MFIVAGLGNPGHEYCENR 18
M ++ GLGNPG +Y R
Sbjct: 1 MKLIVGLGNPGEQYKLTR 18
>gi|328867420|gb|EGG15802.1| hypothetical protein DFA_09470 [Dictyostelium fasciculatum]
Length = 241
Score = 42.3 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 27/202 (13%), Positives = 64/202 (31%), Gaps = 29/202 (14%)
Query: 4 VA--GLGNPGHEYCEN-RHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIK 60
+ G+GN G R +IG I+ + W + I+
Sbjct: 22 IVVFGVGNYGS---LTCRSSIGSRTIEYLLKGLNM-KWMDFKECSTRIAYNQENHLLFIQ 77
Query: 61 PQTFMNLSGQSL-LEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSIS 119
P T++ + + ++++ +H + G + GG + + GL ++
Sbjct: 78 PDTYLVKDNHEVLRRCIKLMPNIRADSFVALHYEHLYKLGVVDRVIGGRTSHNPGLTGLT 137
Query: 120 EKC-GKNYKRLRIGIGRPPDT---------------AHIIRHVLGNFSSPERYFLLPII- 162
+ Y R+ +G+ P D +L F + + ++
Sbjct: 138 SVFQTEQYHRVSMGVAHPVDDITFEHTLYSMSEVYADLQTPFLLNRFPDVQMDLVDKVVL 197
Query: 163 ----DNIARSLPLLAKREDVSF 180
+ ++ + +R D+
Sbjct: 198 PYACNEALIAISEIKQRNDLEA 219
>gi|169842241|ref|ZP_02875346.1| hypothetical protein cdivTM_34062 [candidate division TM7
single-cell isolate TM7a]
Length = 34
Score = 41.9 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 101 LRLKTGGGDAGHNGLKSISEKCGKNYKRLRI 131
LR++ G DAG+NG+KS++ GK++ RLRI
Sbjct: 4 LRIRLSGRDAGNNGVKSLNAHLGKDFARLRI 34
>gi|156100895|ref|XP_001616141.1| hypothetical protein [Plasmodium vivax SaI-1]
gi|148805015|gb|EDL46414.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 234
Score = 41.9 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 12/105 (11%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNL-SGQSLLEVMNFYKLP 82
M ++ + + W + ++ + ILIKP T + SG ++ ++N+
Sbjct: 31 MYVNYLRQRYSMDEWNHVSN--VNSFICEKNNIILIKPVTSLEKNSGLAIKNILNYLNCE 88
Query: 83 NLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYK 127
+L+N +I DL G + K+ I EK G ++
Sbjct: 89 DLKNVCIILPDLYRSIGKFKYKS---------YTKIYEKLGPDFY 124
>gi|221058078|ref|XP_002261547.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|194247552|emb|CAQ40952.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 234
Score = 41.5 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 12/105 (11%)
Query: 24 MCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNL-SGQSLLEVMNFYKLP 82
M ++ + + W + ++ + ILIKP T + SG + ++N+
Sbjct: 31 MYVNYLRQRYNMDEWHHASN--VNSFICEKNNIILIKPVTSLEKNSGLVIKNILNYLNCE 88
Query: 83 NLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYK 127
+L+N +I DL G + K I EK G ++
Sbjct: 89 DLKNVCIILPDLYRSIGKFKYKN---------YTKIYEKLGPDFY 124
>gi|207093637|ref|ZP_03241424.1| peptidyl-tRNA hydrolase [Helicobacter pylori HPKX_438_AG0C1]
Length = 43
Score = 41.5 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 74 EVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAG 111
NFYK+ L++HDDLDL G +R K GGG+
Sbjct: 2 SAKNFYKIK---ELLIVHDDLDLPLGVVRFKNGGGNGQ 36
>gi|91776024|ref|YP_545780.1| nitrite and sulphite reductase 4Fe-4S region [Methylobacillus
flagellatus KT]
gi|91710011|gb|ABE49939.1| sulfite reductase (NADPH) beta subunit [Methylobacillus flagellatus
KT]
Length = 558
Score = 40.0 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 19/138 (13%)
Query: 36 PAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLD 95
W+K A ++ + L I+ P G + N +P E + DDLD
Sbjct: 391 SLWEKARAAGLATPNIGLLTDIICCP-------GGDFCALANAKSIPIAEAIQMQFDDLD 443
Query: 96 --LDFGTLRLKTGG--GDAGHNGLKSI----SEKCGKNYKRLRIGIGRPPDTAHIIRHVL 147
D G + L G GH+ + I +K G + ++ +G G+ + A I VL
Sbjct: 444 YLYDIGEIELNISGCMNACGHHHVGHIGILGVDKDGSEWYQVTLG-GKQGNDAS-IGTVL 501
Query: 148 GN-FSSPERY-FLLPIID 163
G F++ E + +ID
Sbjct: 502 GPSFAAEEMPGVIQKLID 519
>gi|169839420|ref|ZP_02872608.1| hypothetical protein cdivTM_20262 [candidate division TM7
single-cell isolate TM7a]
Length = 53
Score = 39.6 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 116 KSISEKCGKNYKRLRIGIGRPPDTAH 141
KSI G + R++ GIG+P
Sbjct: 3 KSIISHVGNEFVRIKFGIGKPKTKEE 28
>gi|66815443|ref|XP_641738.1| hypothetical protein DDB_G0279227 [Dictyostelium discoideum AX4]
gi|60469775|gb|EAL67762.1| hypothetical protein DDB_G0279227 [Dictyostelium discoideum AX4]
Length = 244
Score = 39.2 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 55/158 (34%), Gaps = 33/158 (20%)
Query: 52 DGLRTILIKPQTFMNLSG-QSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDA 110
+L+K T++ + L ++ + + IH + G + GG
Sbjct: 69 PDNNLLLVKCDTYLAKDNFEVLKRLLILMPNIRSDTFCAIHYEHLFKLGIVESVFGGRTR 128
Query: 111 GHN----GLKSISEKCGKNYKRLRIGIGRPPD---------------TAHIIRHVLGNFS 151
HN G+ S+ + +NY R+ IGI P D V+ F
Sbjct: 129 -HNEALLGISSVFQ--TENYHRVPIGIAHPVDDISFKTNPYTMHSVYQDTTRPFVVNRFP 185
Query: 152 SPERYFLLPIIDNIARSLPLLAKREDVSFLNHIVSVRK 189
+ + ++ +P AK +N I +++K
Sbjct: 186 DIQMEMVDKVV------VPQAAKE----IMNSISTIKK 213
>gi|226366266|ref|YP_002784049.1| threonyl-tRNA synthetase [Rhodococcus opacus B4]
gi|254783533|sp|C1B4B5|SYT_RHOOB RecName: Full=Threonyl-tRNA synthetase; AltName:
Full=Threonine--tRNA ligase; Short=ThrRS
gi|226244756|dbj|BAH55104.1| threonyl-tRNA synthetase [Rhodococcus opacus B4]
Length = 685
Score = 38.8 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 37/114 (32%), Gaps = 17/114 (14%)
Query: 69 GQSLLEVMNFYKLPNLENYLVIHD--------------DLDLDFGTLRLKTGGGDAGHNG 114
G ++ E Y + +V+ D D+D++ G H+
Sbjct: 22 GTAVREA--GYPSKGPDVVVVVRDAEGGLRDLSWVPDADVDVEPVAANTDDGRSVIRHSA 79
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRH-VLGNFSSPERYFLLPIIDNIAR 167
+++ + + ++GIG P V F+ + L + I +
Sbjct: 80 AHVLAQAVQQEFPEAKLGIGPPIKDGFYYDFAVERPFTPEDLANLEKRMKKIVK 133
>gi|86741833|ref|YP_482233.1| threonyl-tRNA synthetase [Frankia sp. CcI3]
gi|86568695|gb|ABD12504.1| Ser-tRNA(Thr) hydrolase [Frankia sp. CcI3]
Length = 701
Score = 38.4 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 8/76 (10%)
Query: 94 LDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRH-VLGNFSS 152
+D G ++ H+ +++ + + + R+GIG P D V F+
Sbjct: 103 IDSPAGRAIVR-------HSTAHVVAQAVQELFPKARLGIGPPIDDGFYYDFDVESPFTP 155
Query: 153 PERYFLLPIIDNIARS 168
+ + I R+
Sbjct: 156 DDLRAIEKRAQAIIRA 171
>gi|226306390|ref|YP_002766350.1| threonyl-tRNA synthetase [Rhodococcus erythropolis PR4]
gi|259516659|sp|C0ZZ26|SYT_RHOE4 RecName: Full=Threonyl-tRNA synthetase; AltName:
Full=Threonine--tRNA ligase; Short=ThrRS
gi|226185507|dbj|BAH33611.1| threonyl-tRNA synthetase [Rhodococcus erythropolis PR4]
Length = 685
Score = 38.4 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 17/114 (14%)
Query: 69 GQSLLEVMNFYKLPNLENYLVIHD--------------DLDLDFGTLRLKTGGGDAGHNG 114
G ++ E Y + +V+ D D+D++ + G H+
Sbjct: 22 GTAVREA--GYPTKGPDVIVVVRDGEGTLKDLSWTPEVDVDVEPVAASTEDGRSVIRHSA 79
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRH-VLGNFSSPERYFLLPIIDNIAR 167
+++ K + ++GIG P V F+ + L + I +
Sbjct: 80 AHVLAQAVQKEFPDAKLGIGPPIKDGFYYDFAVDRPFTPEDLAKLEKRMKQIIK 133
>gi|126733081|ref|ZP_01748836.1| hydrolase, alpha/beta hydrolase fold family protein [Sagittula
stellata E-37]
gi|126706458|gb|EBA05540.1| hydrolase, alpha/beta hydrolase fold family protein [Sagittula
stellata E-37]
Length = 657
Score = 38.4 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Query: 124 KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII-----DNIARSLPLLAKR 175
++Y RLR G P I V+ +FS P+ L ++ D++AR+ + A
Sbjct: 444 QDYARLRTG---PETRQAITGWVVAHFSGPDAEALQALVAAMSDDDVARTFEIAATD 497
>gi|152990490|ref|YP_001356212.1| UDP-glucose 6-dehydrogenase [Nitratiruptor sp. SB155-2]
gi|151422351|dbj|BAF69855.1| UDP-glucose 6-dehydrogenase [Nitratiruptor sp. SB155-2]
Length = 455
Score = 38.1 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 10/82 (12%)
Query: 113 NGLKSISEKCGKNYKRLRIGIGRPPDTA-----HIIRHVLGNFSSP----ERYFLLPIID 163
N + I+E G + ++R+GIG + + F E+ + ++
Sbjct: 236 NEMAKIAEAVGADINKVRVGIGSDSRIGYSFIYPGVGYGGSCFPKDVKALEKIAIDAGVE 295
Query: 164 -NIARSLPLLAKREDVSFLNHI 184
I +++ + K + V FLN I
Sbjct: 296 PKIIKAVEAVNKEQRVYFLNKI 317
>gi|330795316|ref|XP_003285720.1| hypothetical protein DICPUDRAFT_29739 [Dictyostelium purpureum]
gi|325084351|gb|EGC37781.1| hypothetical protein DICPUDRAFT_29739 [Dictyostelium purpureum]
Length = 244
Score = 37.7 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 17/124 (13%)
Query: 56 TILIKPQTFMNLSG-QSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG 114
+L+K T++ + L ++ +++ IH + G + GG ++G
Sbjct: 73 LLLVKCDTYITKDNFEVLKRLITLMPNIKTDSFCAIHYEHLYKLGIVESVFGGRTRHNDG 132
Query: 115 LKSISEKC-GKNYKRLRIGIGRPPD---------------TAHIIRHVLGNFSSPERYFL 158
L I+ ++Y R+ IGI P D V+ F + +
Sbjct: 133 LLGITSVFQTEDYHRVPIGIANPIDDISFKMTPYSIDNVYQDTTKPFVVNRFPEVQLEMV 192
Query: 159 LPII 162
++
Sbjct: 193 DKVV 196
>gi|302384313|ref|YP_003820136.1| pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase
family [Brevundimonas subvibrioides ATCC 15264]
gi|302194941|gb|ADL02513.1| pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase
family [Brevundimonas subvibrioides ATCC 15264]
Length = 333
Score = 37.3 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 86 NYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAH 141
+V D+LDL + T G H GL + G + L IG+ P +
Sbjct: 172 EIVVQADELDLAIDRIVTAT-GSAGTHAGLVAGLAVLGADIPVLGIGVRAPKEKQE 226
>gi|16264180|ref|NP_436972.1| putative regulatory protein [Sinorhizobium meliloti 1021]
gi|307299969|ref|ZP_07579754.1| protein serine/threonine phosphatase [Sinorhizobium meliloti
BL225C]
gi|15140305|emb|CAC48832.1| putative regulatory protein [Sinorhizobium meliloti 1021]
gi|306904858|gb|EFN35441.1| protein serine/threonine phosphatase [Sinorhizobium meliloti
BL225C]
Length = 786
Score = 37.3 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 12/64 (18%)
Query: 124 KNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLAKREDVSFLNH 183
++ KRL+IGIG + H L E L+ ++ ++AR+L + + E FLN
Sbjct: 589 QDGKRLKIGIG------DVTGHGL------ESGVLMLMVQSVARALQEMGEMEPAQFLNR 636
Query: 184 IVSV 187
+
Sbjct: 637 VNRA 640
>gi|312195608|ref|YP_004015669.1| threonyl-tRNA synthetase [Frankia sp. EuI1c]
gi|311226944|gb|ADP79799.1| threonyl-tRNA synthetase [Frankia sp. EuI1c]
Length = 662
Score = 36.9 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 27/76 (35%), Gaps = 8/76 (10%)
Query: 94 LDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRH-VLGNFSS 152
+D G ++ H+ +++ + + R+GIG P V FS+
Sbjct: 62 VDSPDGRAIVR-------HSTAHVVAQAVQDLFPKARLGIGPPIQNGFYYDFDVEKPFSA 114
Query: 153 PERYFLLPIIDNIARS 168
+ + I ++
Sbjct: 115 EDLKAIEKRAREIVKA 130
>gi|158426329|ref|YP_001527621.1| ribosomal-protein-alanine acetyltransferase [Azorhizobium
caulinodans ORS 571]
gi|158333218|dbj|BAF90703.1| ribosomal-protein-alanine acetyltransferase [Azorhizobium
caulinodans ORS 571]
Length = 160
Score = 36.9 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Query: 123 GKNYKRL---RIGIGR---PPDTAHIIRHVLGNFSSPERYFLLPIIDNIAR 167
G+ ++RL R G+G ++ VL + PE L ++D +R
Sbjct: 40 GQEFERLLSERAGVGHVVTAGPGGRLLGFVLSHAVPPESEILSIVMDRASR 90
>gi|111023830|ref|YP_706802.1| threonyl-tRNA synthetase [Rhodococcus jostii RHA1]
gi|123339593|sp|Q0S1E2|SYT_RHOSR RecName: Full=Threonyl-tRNA synthetase; AltName:
Full=Threonine--tRNA ligase; Short=ThrRS
gi|110823360|gb|ABG98644.1| threonine--tRNA ligase [Rhodococcus jostii RHA1]
Length = 685
Score = 36.9 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 37/114 (32%), Gaps = 17/114 (14%)
Query: 69 GQSLLEVMNFYKLPNLENYLVIHD--------------DLDLDFGTLRLKTGGGDAGHNG 114
G ++ E Y + +V+ D D++++ G H+
Sbjct: 22 GTAVREA--GYPSKGPDVVVVVRDAEGQLKDLSWVPDTDVEVEPVAANTDDGRSVIRHSA 79
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRH-VLGNFSSPERYFLLPIIDNIAR 167
+++ + + ++GIG P V F+ + L + I +
Sbjct: 80 AHVLAQAVQQEFPEAKLGIGPPIKDGFYYDFAVDRPFTPEDLASLEKRMKKIIK 133
>gi|189463850|ref|ZP_03012635.1| hypothetical protein BACINT_00183 [Bacteroides intestinalis DSM
17393]
gi|189438800|gb|EDV07785.1| hypothetical protein BACINT_00183 [Bacteroides intestinalis DSM
17393]
Length = 665
Score = 36.5 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Query: 125 NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
+Y R R GIG P I S E+ + +++
Sbjct: 60 DYYRQRTGIGHPDIDMKNI-----KISKEEQKWADDALEH 94
>gi|239626011|ref|ZP_04669042.1| alkylglycerone-phosphate synthase [Clostridiales bacterium
1_7_47_FAA]
gi|239520241|gb|EEQ60107.1| alkylglycerone-phosphate synthase [Clostridiales bacterium
1_7_47FAA]
Length = 480
Score = 36.5 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 16/130 (12%)
Query: 12 HEY---CENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILI---KPQTFM 65
EY + HN+GF I + + I + + ++ ++M
Sbjct: 333 EEYKLIEKT-HNVGFTT--EISANW--SNIHDIYENVIMRIKNEIPDITMVGGHSSHSYM 387
Query: 66 NLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNG-----LKSISE 120
N + + N E H+ ++ LK GG H+G ++ I +
Sbjct: 388 NGTNLYFMYYYNVVDCDVTEEITKYHNPINTIIVEETLKRGGSMCHHHGVGKYRVRWIKQ 447
Query: 121 KCGKNYKRLR 130
+ G Y L+
Sbjct: 448 EHGSAYPVLK 457
>gi|300787200|ref|YP_003767491.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32]
gi|299796714|gb|ADJ47089.1| threonyl-tRNA synthetase [Amycolatopsis mediterranei U32]
Length = 675
Score = 36.5 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 41/128 (32%), Gaps = 17/128 (13%)
Query: 69 GQSLLEVMNFYKLPN--LENYLVIHD--------------DLDLDFGTLRLKTGGGDAGH 112
G + + LP + +V+ D D +++ + G H
Sbjct: 20 GTTAGAAVREAGLPTKGEDTVVVVRDAEGKLRDLAWVPEADAEVEPVAANTEDGRSVIRH 79
Query: 113 NGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRH-VLGNFSSPERYFLLPIIDNIARSLPL 171
+ +++ + + ++GIG P V F+ + L + I +
Sbjct: 80 SAAHVLAQAVQQQFPDAKLGIGPPVKDGFYYDFAVDKPFTPEDLQALEKRMKQIVKGAQQ 139
Query: 172 LAKREDVS 179
++R S
Sbjct: 140 FSRRVFDS 147
>gi|261416782|ref|YP_003250465.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373238|gb|ACX75983.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327266|gb|ADL26467.1| radical SAM domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 467
Score = 36.1 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 45/131 (34%), Gaps = 33/131 (25%)
Query: 73 LEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGL----------KSISEKC 122
+ +F ++ + DD G L ++ G D G + I
Sbjct: 196 GRLHSFAPQTIVDQVQALVDD-----GCLEIQLTGQDCACYGFDIGTNLAELTQRILTHV 250
Query: 123 GKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPII--DNIARSLPLLAK---RED 177
NY R+R+G+G P RHVL + LL D I + + + +
Sbjct: 251 NGNY-RIRLGMGNP-------RHVLSY-----QEALLNCFTDDRIYKFIHIPVQSGSENV 297
Query: 178 VSFLNHIVSVR 188
+ +N + R
Sbjct: 298 LKAMNRRHTAR 308
>gi|54025682|ref|YP_119924.1| threonyl-tRNA synthetase [Nocardia farcinica IFM 10152]
gi|54017190|dbj|BAD58560.1| putative threonyl-tRNA synthetase [Nocardia farcinica IFM 10152]
Length = 703
Score = 36.1 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 50/148 (33%), Gaps = 20/148 (13%)
Query: 59 IKPQTFMNL-SGQSLLEVMNFYKLPN--LENYLVIHD------------DLDLDFGTL-- 101
I P T + + +G + + LP + +V+ D D D++ +
Sbjct: 24 ISPSTLVRVPAGTTAGAAVREAGLPTKGPDTIVVVRDAEGALRDLSWTPDTDVEVEAVPA 83
Query: 102 RLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRH-VLGNFSSPERYFLLP 160
+ G H+ +++ + + ++GIG P V F+ + L
Sbjct: 84 STEAGRSVIRHSAAHVLAQAVQQEFPEAKLGIGPPIKDGFYYDFQVERPFTPEDLARLES 143
Query: 161 IIDNIARSLPLLAKR--EDVSFLNHIVS 186
+ I + ++R E + +
Sbjct: 144 RMKKIIKGAQRFSRRVVEIEEARAELAN 171
>gi|325677412|ref|ZP_08157076.1| 3-hydroxyisobutyrate dehydrogenase [Rhodococcus equi ATCC 33707]
gi|325551659|gb|EGD21357.1| 3-hydroxyisobutyrate dehydrogenase [Rhodococcus equi ATCC 33707]
Length = 304
Score = 36.1 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 1 MFI-VAGLGNPGHEYCENRHNIGFMCI 26
M I GLGN G N H+ GF +
Sbjct: 1 MKIGWIGLGNMGLPMAANLHSAGFELV 27
>gi|319901477|ref|YP_004161205.1| Heparinase II/III family protein [Bacteroides helcogenes P 36-108]
gi|319416508|gb|ADV43619.1| Heparinase II/III family protein [Bacteroides helcogenes P 36-108]
Length = 665
Score = 36.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Query: 125 NYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDN 164
+Y R RIGIG P I S E+ + +++
Sbjct: 60 DYYRQRIGIGHPDINLKNI-----KISKKEQKWADDALEH 94
>gi|325000692|ref|ZP_08121804.1| threonyl-tRNA synthetase [Pseudonocardia sp. P1]
Length = 682
Score = 36.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 15/100 (15%), Positives = 31/100 (31%), Gaps = 15/100 (15%)
Query: 84 LENYLVIHD------DLDLDFGT--------LRLKTGGGDAGHNGLKSISEKCGKNYKRL 129
E +V+ D DL G H+ +++ + + +
Sbjct: 35 PEAIVVVRDAGGTLRDLAWAPEADTEVVAVAANTDEGRSVIRHSAAHVLAQAVQQLFPKA 94
Query: 130 RIGIGRPPDTAHIIRH-VLGNFSSPERYFLLPIIDNIARS 168
R+GIG P V F+ + + + I ++
Sbjct: 95 RLGIGPPVTDGFYYDFDVDTPFTPEDLKKIESAMKKIVKA 134
>gi|312137615|ref|YP_004004951.1| 3-hydroxyisobutirate dehydrogenase/tartronate semialdehyde
reductase [Rhodococcus equi 103S]
gi|311886954|emb|CBH46263.1| 3-hydroxyisobutirate dehydrogenase/tartronate semialdehyde
reductase [Rhodococcus equi 103S]
Length = 323
Score = 35.7 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 1 MFI-VAGLGNPGHEYCENRHNIGFMCI 26
M I GLGN G N H+ GF +
Sbjct: 20 MKIGWIGLGNMGLPMAANLHSAGFELV 46
>gi|328861077|gb|EGG10181.1| hypothetical protein MELLADRAFT_71078 [Melampsora larici-populina
98AG31]
Length = 165
Score = 35.7 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 45/121 (37%), Gaps = 17/121 (14%)
Query: 52 DGLRTILIKPQTFMNLSGQSLLEVMN--FYKLPNLENYLVIHDDLDLDFGTLRLKTGGGD 109
D L LIKP+ MN+ G + + + F P+ + L+ D R
Sbjct: 14 DELTLHLIKPRALMNVLGPFVHDYHSNVFRSQPDTKLILLHDDLDLQPLAVRRRSPHKSL 73
Query: 110 A--GHNGLKSISEKCGKNYKR------LRIGIGRPP-----DTAHIIRHVLGNFSSPERY 156
GHNGL+S+ R + IGIGR P D++ + V+ E
Sbjct: 74 KPYGHNGLRSVLSAVPS--PRHKLIHTIGIGIGRDPDNTSKDSSAVGNWVMSPLKRAEIE 131
Query: 157 F 157
Sbjct: 132 A 132
>gi|149374730|ref|ZP_01892503.1| Sulfite reductase, beta subunit (hemoprotein) [Marinobacter
algicola DG893]
gi|149360619|gb|EDM49070.1| Sulfite reductase, beta subunit (hemoprotein) [Marinobacter
algicola DG893]
Length = 550
Score = 35.7 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 11/106 (10%)
Query: 69 GQSLLEVMNFYKLPNLENYLVIHDDLD--LDFGTLRLKTGG--GDAGHNGLKSI----SE 120
G + N +P E+ DD+D D G + L G GH+ + +I +
Sbjct: 418 GGDYCALANAKSIPVAESIQRQFDDMDYLYDIGNIDLNISGCMNACGHHHVGNIGVLGVD 477
Query: 121 KCGKNYKRLRIGIGRPPDTAHIIRHVLGN-FSSPERYFLLPIIDNI 165
K G+ + ++ +G G I +LG F+ + ++ I N+
Sbjct: 478 KKGQEFYQISLG-GS-SHHDAAIGKILGPSFAREDMPEVMQKIINV 521
>gi|257055522|ref|YP_003133354.1| threonyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
gi|256585394|gb|ACU96527.1| threonyl-tRNA synthetase /Ser-tRNA(Thr) hydrolase
[Saccharomonospora viridis DSM 43017]
Length = 692
Score = 35.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 41/122 (33%), Gaps = 17/122 (13%)
Query: 69 GQSLLEVMNFYKLPNLENYLVIHD--------------DLDLDFGTLRLKTGGGDAGHNG 114
G ++ E Y E +V+ D +++++ + G H+
Sbjct: 24 GAAVREA--GYPSKGAEAIVVVRDPEGTLRDLAWVPDVNVEVEPVAANSEDGRSVIRHSA 81
Query: 115 LKSISEKCGKNYKRLRIGIGRPPDTAHIIRH-VLGNFSSPERYFLLPIIDNIARSLPLLA 173
+++ + + ++GIG P V F+ + L + I + +
Sbjct: 82 AHVLAQAVQQQFPEAKLGIGPPIKDGFYYDFAVDRPFTPEDLQALEKRMKQIIKGAQQFS 141
Query: 174 KR 175
+R
Sbjct: 142 RR 143
>gi|268374490|gb|ACZ04460.1| immunoglobulin E heavy chain variable region [Homo sapiens]
Length = 108
Score = 35.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 9/81 (11%)
Query: 22 GFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKL 81
GF + I+ ++ +KF ++ + +T+ +M+LS + FY
Sbjct: 19 GFEWVGTINPRGGGTSYAQKFQGRVTMTRDTSTKTV------YMDLSSLRSDDTAVFYCA 72
Query: 82 PN---LENYLVIHDDLDLDFG 99
+ ++ VI DD+D +G
Sbjct: 73 RDRITMDGVDVIPDDVDFYYG 93
>gi|311897203|dbj|BAJ29611.1| putative chaperone protein DnaK [Kitasatospora setae KM-6054]
Length = 615
Score = 35.4 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Query: 115 LKSISEKCGKNYKRLRIGI-GRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLLA 173
++S+ G ++ +IGI G+ I VL +L + + ++P
Sbjct: 66 IRSVKRHMGTDW---KIGIDGKDFTPQQISAFVLQKLKRDAESYLGETVTDAVITVPAYF 122
Query: 174 KREDVSF 180
+
Sbjct: 123 NDSERQA 129
>gi|158313600|ref|YP_001506108.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec]
gi|238686857|sp|A8LE67|SYT_FRASN RecName: Full=Threonyl-tRNA synthetase; AltName:
Full=Threonine--tRNA ligase; Short=ThrRS
gi|158109005|gb|ABW11202.1| threonyl-tRNA synthetase [Frankia sp. EAN1pec]
Length = 658
Score = 35.4 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 28/84 (33%), Gaps = 10/84 (11%)
Query: 94 LDLDFGTLRLKTGGGDAGHNGLKSISEKCGKN-YKRLRIGIGRPPDTAHIIRH-VLGNFS 151
+D G ++ + + ++ + + R+GIG P V F+
Sbjct: 62 VDSPDGRAIVRHS--------CAHVVAQAVQDLFPKARLGIGPPIQDGFYYDFDVERPFT 113
Query: 152 SPERYFLLPIIDNIARSLPLLAKR 175
+ + I ++ A+R
Sbjct: 114 PEDLKAVEKRAQEIIKAGQRFARR 137
>gi|220934082|ref|YP_002512981.1| Adenylosuccinate synthase [Thioalkalivibrio sp. HL-EbGR7]
gi|254788725|sp|B8GND3|PURA_THISH RecName: Full=Adenylosuccinate synthetase; Short=AMPSase;
Short=AdSS; AltName: Full=IMP--aspartate ligase
gi|219995392|gb|ACL71994.1| Adenylosuccinate synthase [Thioalkalivibrio sp. HL-EbGR7]
Length = 430
Score = 35.0 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 54/171 (31%), Gaps = 27/171 (15%)
Query: 19 HNIGF-MCIDRIHS-FHFFPA--WKKKFHAEISEGQLDGLRTILIKPQTFM------NLS 68
HN G + ID + H P+ ++ I G +++ P+ M
Sbjct: 38 HNAGHTLVIDGKKTVLHLIPSGILREGVECMIGNG-------VVLSPEALMKEMAQLEAE 90
Query: 69 GQSLLEVMNFYKLPNLENYLVIHDDLD----LDFGTLRLKTGG---GDAGHNGLKSISEK 121
G + + + + L L H LD G + T G G A + + +
Sbjct: 91 GVPVRDRLRLSESCQL--ILPYHVSLDLAREQARGKAAIGTTGRGIGPAYEDKVSRRGLR 148
Query: 122 CGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPERYFLLPIIDNIARSLPLL 172
G + R R + + VL ++ E ++D L
Sbjct: 149 LGDLFHRERFA-AKLGEVLDYHNFVLQHYFKSEAVDFQQVLDQSLALAETL 198
>gi|312139482|ref|YP_004006818.1| threonine-tRNA ligase thrs [Rhodococcus equi 103S]
gi|311888821|emb|CBH48133.1| threonine-tRNA ligase ThrS [Rhodococcus equi 103S]
Length = 683
Score = 35.0 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 37/109 (33%), Gaps = 15/109 (13%)
Query: 82 PNLENYLVIHD------------DLDLDFGTLRLKT--GGGDAGHNGLKSISEKCGKNYK 127
+ +V+ D D+D++ + T G H+ +++ + +
Sbjct: 33 KGPDAIVVVRDADGNLKDLSWTPDVDVEVEAVAADTEDGRSVIRHSAAHVLAQAVQQEFP 92
Query: 128 RLRIGIGRPPDTAHIIRH-VLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
++GIG P V F+ + L + I + ++R
Sbjct: 93 EAKLGIGPPIKDGFYYDFQVERPFTPEDLAKLEKRMKKIVKDAQRFSRR 141
>gi|325672628|ref|ZP_08152324.1| threonine--tRNA ligase [Rhodococcus equi ATCC 33707]
gi|325556505|gb|EGD26171.1| threonine--tRNA ligase [Rhodococcus equi ATCC 33707]
Length = 683
Score = 35.0 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 37/109 (33%), Gaps = 15/109 (13%)
Query: 82 PNLENYLVIHD------------DLDLDFGTLRLKT--GGGDAGHNGLKSISEKCGKNYK 127
+ +V+ D D+D++ + T G H+ +++ + +
Sbjct: 33 KGPDAIVVVRDADGNLKDLSWTPDVDVEVEAVAADTEDGRSVIRHSAAHVLAQAVQQEFP 92
Query: 128 RLRIGIGRPPDTAHIIRH-VLGNFSSPERYFLLPIIDNIARSLPLLAKR 175
++GIG P V F+ + L + I + ++R
Sbjct: 93 EAKLGIGPPIKDGFYYDFQVERPFTPEDLAKLEKRMKKIVKDAQRFSRR 141
>gi|183982102|ref|YP_001850393.1| threonyl-tRNA synthetase ThrS [Mycobacterium marinum M]
gi|238690929|sp|B2HM74|SYT_MYCMM RecName: Full=Threonyl-tRNA synthetase; AltName:
Full=Threonine--tRNA ligase; Short=ThrRS
gi|183175428|gb|ACC40538.1| threonyl-tRNA synthetase ThrS [Mycobacterium marinum M]
Length = 691
Score = 35.0 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 31/99 (31%), Gaps = 15/99 (15%)
Query: 84 LENYLVIHD--------------DLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRL 129
+ +V+ D D ++ G H+ +++ + +
Sbjct: 43 PDAIVVVRDAEGKLRDLSWVPDADAEVTPIAANTDDGRSVIRHSTAHVLAQAVQDLFPQA 102
Query: 130 RIGIGRPPDTAHIIRH-VLGNFSSPERYFLLPIIDNIAR 167
++GIG P VL F+ + L + I +
Sbjct: 103 KLGIGPPITDGFYYDFEVLEPFTPDDLQALEKRMRQIVK 141
>gi|118618602|ref|YP_906934.1| threonyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
gi|166225468|sp|A0PSZ4|SYT_MYCUA RecName: Full=Threonyl-tRNA synthetase; AltName:
Full=Threonine--tRNA ligase; Short=ThrRS
gi|118570712|gb|ABL05463.1| threonyl-tRNA synthetase ThrS [Mycobacterium ulcerans Agy99]
Length = 691
Score = 35.0 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 31/99 (31%), Gaps = 15/99 (15%)
Query: 84 LENYLVIHD--------------DLDLDFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRL 129
+ +V+ D D ++ G H+ +++ + +
Sbjct: 43 PDAIVVVRDAEGKLRDLSWVPDADAEVTPIAANTDDGRSVIRHSTAHVLAQAVQDLFPQA 102
Query: 130 RIGIGRPPDTAHIIRH-VLGNFSSPERYFLLPIIDNIAR 167
++GIG P VL F+ + L + I +
Sbjct: 103 KLGIGPPITDGFYYDFEVLEPFTPDDLQALEKRMRQIVK 141
>gi|111224550|ref|YP_715344.1| threonyl-tRNA synthetase [Frankia alni ACN14a]
gi|111152082|emb|CAJ63808.1| Threonyl-tRNA synthetase (Threonine--tRNA ligase) [Frankia alni
ACN14a]
Length = 692
Score = 35.0 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 25/73 (34%), Gaps = 8/73 (10%)
Query: 97 DFGTLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRH-VLGNFSSPER 155
G ++ H+ +++ + + R+GIG P D V F+ +
Sbjct: 93 PAGRAIVR-------HSAAHVVAQAVQDLFPKARLGIGPPIDNGFYYDFDVETPFTPEDL 145
Query: 156 YFLLPIIDNIARS 168
+ I ++
Sbjct: 146 KAIEKKAQAIIKA 158
>gi|289664065|ref|ZP_06485646.1| putative signal transduction protein [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 682
Score = 35.0 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 68 SGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISEK 121
S +S Y+ E LV+ D G+L + GGG AG N + +
Sbjct: 222 SDESWSAAQASYQCAAREKILVLELDALTQLGSLASRVGGGAAGDNETEDYLQH 275
>gi|262404383|ref|ZP_06080938.1| ribosomal large subunit pseudouridine synthase C [Vibrio sp. RC586]
gi|262349415|gb|EEY98553.1| ribosomal large subunit pseudouridine synthase C [Vibrio sp. RC586]
Length = 315
Score = 34.2 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 10/94 (10%)
Query: 25 CIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKPQTFMNLSGQSLLEVMNFYKLPNL 84
+ RI KK+ AE +L+ + + P T ++ K+ L
Sbjct: 37 VVYRILRKGEVRVNKKRVKAEY---KLEAGDVVRVPPVTVEVKENEATPPSTKLNKVAEL 93
Query: 85 ENYLVIHDD----LDLDFGTLRLKTGGGDAGHNG 114
E+ +V DD L+ GT GG H G
Sbjct: 94 EHCIVYEDDHLLILNKPSGTAVH---GGSGLHFG 124
>gi|302527884|ref|ZP_07280226.1| threonyl-tRNA synthetase [Streptomyces sp. AA4]
gi|302436779|gb|EFL08595.1| threonyl-tRNA synthetase [Streptomyces sp. AA4]
Length = 678
Score = 34.2 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 38/128 (29%), Gaps = 17/128 (13%)
Query: 69 GQSLLEVMNFYKLPN--LENYLVIHD------DLDLDFGTLRLKT--------GGGDAGH 112
G + + LP + +V+ D DL G H
Sbjct: 20 GTTAGAAVREAGLPTKGPDTIVVVRDADGKLRDLAWAPEAEAQVEAVAANTEDGRSVIRH 79
Query: 113 NGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRH-VLGNFSSPERYFLLPIIDNIARSLPL 171
+ +++ + + ++GIG P V F+ + L + I +
Sbjct: 80 SAAHVLAQAVQQEFPDAKLGIGPPVRDGFYYDFAVEKPFTPEDLQKLEKRMKQIVKGAQQ 139
Query: 172 LAKREDVS 179
++R S
Sbjct: 140 FSRRVFAS 147
>gi|271967410|ref|YP_003341606.1| threonyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
gi|270510585|gb|ACZ88863.1| threonyl-tRNA synthetase [Streptosporangium roseum DSM 43021]
Length = 659
Score = 34.2 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 55/150 (36%), Gaps = 18/150 (12%)
Query: 48 EGQLDGLRTILIKPQTF---MNLSGQSLLEVMNFYKLPNLENYLVIHDDLD-----LDFG 99
L G ++ + T+ + G+S++ +L +L + D+++ G
Sbjct: 8 RITLAGAERVVAEGTTYGEALQADGRSVVAARANGELRDLAARVAEGDEVEPVEVGSPDG 67
Query: 100 TLRLKTGGGDAGHNGLKSISEKCGKNYKRLRIGIGRPPDTAHIIRH-VLGNFSSPERYFL 158
++ H+ +++ + + ++GIG P D V F+ + +
Sbjct: 68 RAIVR-------HSTAHVMAQAVQELFPEAKLGIGPPVDNGFYYDFDVKNPFTPEDLKRV 120
Query: 159 LPIIDNIARSLPLLAKR--EDVSFLNHIVS 186
+ I + + ++R D L + +
Sbjct: 121 EKRMREIVKQGQIFSRRPVSDEDALEELAA 150
>gi|147777577|emb|CAN73690.1| hypothetical protein VITISV_034834 [Vitis vinifera]
Length = 818
Score = 34.2 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 38 WKKKFHAEISEGQLDGLRTILIK-PQTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDL 96
WK F + + + L P TFM L +L ++ + + ++ LV +LD
Sbjct: 710 WKIAFKTKYGLYEWLAMPFGLTNAPSTFMRLMNHALRAFISRFVVVYFDDILVYSKNLDE 769
Query: 97 DFGTLRL 103
L
Sbjct: 770 HINHLHC 776
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.313 0.182 0.640
Lambda K H
0.267 0.0559 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,340,674,457
Number of Sequences: 13984884
Number of extensions: 201614741
Number of successful extensions: 743951
Number of sequences better than 10.0: 2384
Number of HSP's better than 10.0 without gapping: 4508
Number of HSP's successfully gapped in prelim test: 174
Number of HSP's that attempted gapping in prelim test: 727509
Number of HSP's gapped (non-prelim): 4900
length of query: 189
length of database: 4,792,584,752
effective HSP length: 131
effective length of query: 58
effective length of database: 2,960,564,948
effective search space: 171712766984
effective search space used: 171712766984
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.5 bits)
S2: 78 (34.2 bits)