RPSBLAST alignment for GI: 254780225 and conserved domain: cd02406
>gnl|CDD|48347 cd02406, CRS2, Chloroplast RNA splicing 2 (CRS2) is a nuclear-encoded protein required for the splicing of group II introns in the chloroplast. CRS2 forms stable complexes with two CRS2-associated factors, CAF1 and CAF2, which are required for the splicing of distinct subsets of CRS2-dependent introns. CRS2 is closely related to bacterial peptidyl-tRNA hydrolases (PTH).. Length = 191
Score = 135 bits (342), Expect = 5e-33
Identities = 64/156 (41%), Positives = 92/156 (58%), Gaps = 3/156 (1%)
Query: 2 FIVAGLGNPGHEYCENRHNIGFMCIDRIHSFHFFPAWKKKFHAEISEGQLDGLRTILIKP 61
+++AGLGNPG++Y RHN+GF +DRI +F + + G + + +L KP
Sbjct: 3 WLIAGLGNPGNKYKGTRHNVGFEMVDRIAEAEGITMNTIQFKSLLGIGSIGDVPVLLAKP 62
Query: 62 QTFMNLSGQSLLEVMNFYKLPNLENYLVIHDDLDLDFGTLRLKTGGGDAGHNGLKSISE- 120
QT+MN SG+S+ + +YK+P L + LVI+DD+ L G LRL+ GG HNGL+S+ E
Sbjct: 63 QTYMNYSGESVGPLAAYYKVP-LRHILVIYDDMSLPNGVLRLQPKGGHGRHNGLQSVIEH 121
Query: 121 -KCGKNYKRLRIGIGRPPDTAHIIRHVLGNFSSPER 155
+ + RL IGIG PP +L FSS ER
Sbjct: 122 LDGSREFPRLSIGIGSPPGKMDPRAFLLQKFSSEER 157