HHsearch alignment for GI: 254780226 and conserved domain: CHL00071

Probab=94.22  E-value=0.12  Score=30.82  Aligned_cols=89  Identities=24%  Similarity=0.282  Sum_probs=46.2

Q ss_pred             CEEEEEECCCCCHHHHHHHHHCCCCCCCCC---CCCCCC-----CCCEEEE-ECCCHHHHHHHHHCCCCEEEEEEEEEEE
Q ss_conf             248675288878889999874048987366---686744-----8833799-7685558777642186502335799985
Q gi|254780226|r    3 FKCGIIGLPNVGKSTLFNALTRTASAQAAN---YPFCTI-----EPNSGEV-AVPDPRMHKLAEIAESKDLVPTRMSFVD   73 (367)
Q Consensus         3 ~kiGlvG~pn~GKST~f~alT~~~~~~~~~---ypFtTi-----~pn~g~~-~v~d~~~~~l~~~~~~~~~~p~~i~~iD   73 (367)
T Consensus        13 vni~~~GHVD~GKSTL~g~L~~~-~~~~~~~~~~~~~~~D~~~eEr~rGiTid~-------~~~~~et~~---~~~~~iD   81 (409)
T CHL00071         13 VNIGTIGHVDHGKTTLTAAITMT-LAANGGAKGKKYDEIDSAPEEKARGITINT-------AHVEYETEN---RHYAHVD   81 (409)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHH-HHHCCCHHHHHHHHCCCCHHHHHCCCEEEE-------CEEEEECCC---EEEEEEE
T ss_conf             99999954588399999998645-300451334315532379768736944880-------248996287---5999986


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             122354322246632899998730374788501234
Q gi|254780226|r   74 IAGLVRGASKGEGLGNQFLAHIREVDAIIHVLRCFK  109 (367)
Q Consensus        74 vaGLv~gA~~G~GlGN~FL~~ir~aDalihVVdaf~  109 (367)
T Consensus        82 ~PG-----H~--~fv~nmi~Gas~aD~alLVV~A~~  110 (409)
T CHL00071         82 CPG-----HA--DYVKNMITGAAQMDGAILVVSAAD  110 (409)
T ss_pred             CCC-----HH--HHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             796-----78--999998752301581289998687