HHsearch alignment for GI: 254780226 and conserved domain: COG1100
>COG1100 GTPase SAR1 and related small G proteins [General function prediction only].
Probab=97.78 E-value=0.00011 Score=51.23 Aligned_cols=82 Identities=24% Similarity=0.302 Sum_probs=53.1
Q ss_pred CEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCC
Q ss_conf 24867528887888999987404898736668674488337997685558777642186502335799985122354322
Q gi|254780226|r 3 FKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGAS 82 (367)
Q Consensus 3 ~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA~ 82 (367)
T Consensus 6 ~kivv~G~~g~GKTtl~~~l~~~-~-~~~~~~~t~~~~~~~~~~~~~~~--------------~~~~~~~Dt~gq~~~~- 68 (219)
T COG1100 6 FKIVVLGDGGVGKTTLLNRLVGD-E-FPEGYPPTIGNLDPAKTIEPYRR--------------NIKLQLWDTAGQEEYR- 68 (219)
T ss_pred EEEEEECCCCCCHHHHHHHHHCC-C-CCCCCCCCEEECCCCCEEECCCC--------------CEEEEEEECCCHHHHH-
T ss_conf 79999999999889999999647-6-76556761454043203622666--------------0026767679869999-
Q ss_pred CCCCCHHHHH-HHHHCCCEEEEEECCC
Q ss_conf 2466328999-9873037478850123
Q gi|254780226|r 83 KGEGLGNQFL-AHIREVDAIIHVLRCF 108 (367)
Q Consensus 83 ~G~GlGN~FL-~~ir~aDalihVVdaf 108 (367)
T Consensus 69 -------~~~~~y~~~~~~~l~~~d~~ 88 (219)
T COG1100 69 -------SLRPEYYRGANGILIVYDST 88 (219)
T ss_pred -------HHHHHCCCCCCEEEEEEECC
T ss_conf -------98875043897899999762