HHsearch alignment for GI: 254780226 and conserved domain: COG1160

Probab=99.75  E-value=1.5e-17  Score=138.13  Aligned_cols=92  Identities=34%  Similarity=0.398  Sum_probs=78.9

Q ss_pred             CC-CEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCC
Q ss_conf             98-24867528887888999987404898736668674488337997685558777642186502335799985122354
Q gi|254780226|r    1 MG-FKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVR   79 (367)
Q Consensus         1 m~-~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~   79 (367)
T Consensus         1 m~~~~VAIVGRPNVGKSTLFNRL~g~r~AIV~D~pGvTRDr~y~~~~~~~-----------------~~f~lIDTgGl~~   63 (444)
T COG1160           1 MSTPVVAIVGRPNVGKSTLFNRLTGRRIAIVSDTPGVTRDRIYGDAEWLG-----------------REFILIDTGGLDD   63 (444)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEECC-----------------CEEEEEECCCCCC
T ss_conf             99778999899987589999887577026760699975577545069838-----------------6079997899776


Q ss_pred             CC--CCCCCCHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             32--2246632899998730374788501234
Q gi|254780226|r   80 GA--SKGEGLGNQFLAHIREVDAIIHVLRCFK  109 (367)
Q Consensus        80 gA--~~G~GlGN~FL~~ir~aDalihVVdaf~  109 (367)
T Consensus        64 ~~~~~l~~~i~~Qa~~Ai~eADvilfvVD~~~   95 (444)
T COG1160          64 GDEDELQELIREQALIAIEEADVILFVVDGRE   95 (444)
T ss_pred             CCCHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_conf             88128999999999999976799999984887