HHsearch alignment for GI: 254780226 and conserved domain: PRK05306

>PRK05306 infB translation initiation factor IF-2; Validated.
Probab=96.85  E-value=0.041  Score=34.05  Aligned_cols=110  Identities=22%  Similarity=0.407  Sum_probs=68.9

Q ss_pred             EEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCC
Q ss_conf             86752888788899998740489873666867448833799768555877764218650233579998512235432224
Q gi|254780226|r    5 CGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGASKG   84 (367)
Q Consensus         5 iGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA~~G   84 (367)
T Consensus       344 vt~mghvdhgkt~lld~~r~~---~v~~~e~ggitq~iga~~v~~---------~~~-----~~itf~dtpg-----h~-  400 (839)
T PRK05306        344 VTIMGHVDHGKTSLLDAIRKT---KVAAGEAGGITQHIGAYQVET---------ENG-----KKITFLDTPG-----HE-  400 (839)
T ss_pred             EEEECCCCCCHHHHHHHHHCC---CCCCCCCCCCCCEEEEEEEEE---------CCC-----CEEEEECCCC-----HH-
T ss_conf             988577467731489998628---753556787552223499995---------699-----8799855885-----58-


Q ss_pred             CCCHHHHHHHH-----HCCCEEEEEECCCCCCCC--------CCCC----------CCCC-CCHHHHHHHHHHHHHHHHH
Q ss_conf             66328999987-----303747885012345421--------1345----------7767-3215788988887643322
Q gi|254780226|r   85 EGLGNQFLAHI-----REVDAIIHVLRCFKDENI--------IHVE----------GRID-PINDIETIETELMLSDLER  140 (367)
Q Consensus        85 ~GlGN~FL~~i-----r~aDalihVVdaf~~~~v--------~~~~----------g~~D-P~~Di~~i~~EL~l~dle~  140 (367)
T Consensus       401 -----af-~~mr~rga~~tdi~ilvvaa--ddgv~pqt~eai~~~~~a~vp~ivaink~d~~~a~~~~v~~~l~~--~~~  470 (839)
T PRK05306        401 -----AF-TAMRARGAQVTDIVVLVVAA--DDGVMPQTIEAINHAKAAGVPIIVAINKIDKPGANPDRVKQELTE--YGL  470 (839)
T ss_pred             -----HH-HHHHHCCCCCCCEEEEEEEC--CCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHH--CCC
T ss_conf             -----89-99986357654369999977--777567789999999974998899974046788988999999998--498


Q ss_pred             HHHHHHH
Q ss_conf             2457777
Q gi|254780226|r  141 LERLFEK  147 (367)
Q Consensus       141 lek~~~k  147 (367)
T Consensus       471 ~~e~~gg  477 (839)
T PRK05306        471 VPEEWGG  477 (839)
T ss_pred             CHHHCCC
T ss_conf             6454289