HHsearch alignment for GI: 254780226 and conserved domain: PRK11092
>PRK11092 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; Provisional.
Probab=98.56 E-value=8.6e-08 Score=72.32 Aligned_cols=62 Identities=23% Similarity=0.235 Sum_probs=50.4
Q ss_pred CCEEEECCCCCCCCCEECCCCCCHHHHHHCCCCHHCCCCEEEEECCHHHHHHCCCHHHHHHCCCEECCCCEEEECCCCEE
Q ss_conf 96466105787545401278676778511001210348369997368887744996888874965315760796549889
Q gi|254780226|r 282 DLITYFTVGPKETRAWTIPRGTNAQKAAGVIHTDFEKGFIRALTISYKDYVAMGGENAAKEAGKARDEGKEYIVKDGDIL 361 (367)
Q Consensus 282 ~li~~~tvg~~e~~aw~i~~GstA~d~A~~IHtDi~kgFi~A~v~~~~~~~~~~~~~~~k~~g~~r~~Gkdy~v~DGDVi 361 (367)
T Consensus 386 deIyVFTP---kGdii~LP~GsTplDFAYaIHTeiG~~c~GAkV-----------------NG--~~vPL~t~LknGD~V 443 (702)
T PRK11092 386 DEIYVFTP---EGRIVELPAGATPVDFAYAVHTDIGHACVGARV-----------------DR--QPYPLSQPLTSGQTV 443 (702)
T ss_pred CEEEEECC---CCCEEECCCCCCEEHHHHHHCCHHCCEEEEEEE-----------------CC--EECCCCCCCCCCCEE
T ss_conf 64999879---996798889981001134316410121678999-----------------99--988998716789888
Q ss_pred EEEC
Q ss_conf 9963
Q gi|254780226|r 362 HFRF 365 (367)
Q Consensus 362 ~~~f 365 (367)
T Consensus 444 EIiT 447 (702)
T PRK11092 444 EIIT 447 (702)
T ss_pred EEEE
T ss_conf 9983