HHsearch alignment for GI: 254780226 and conserved domain: TIGR02729
>TIGR02729 Obg_CgtA GTP-binding protein Obg/CgtA; InterPro: IPR014100 This entry describes a universal, mostly one-gene-per-genome GTP-binding protein that associates with ribosomal subunits and appears to play a role in ribosomal RNA maturation. Mutations in this gene are pleiotropic, but it appears that effects on cellular functions such as chromosome partition may be secondary to the effect on ribosome structure..
Probab=100.00 E-value=9.5e-39 Score=281.04 Aligned_cols=115 Identities=42% Similarity=0.737 Sum_probs=97.6
Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCC
Q ss_conf 48675288878889999874048987366686744883379976855587776421865023357999851223543222
Q gi|254780226|r 4 KCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGASK 83 (367)
Q Consensus 4 kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA~~ 83 (367)
T Consensus 160 DVGLvGfPNAGKSTLLs~~S-~AkPKiAdYPFTTL~P~LGvv~~~~~~Y-------------~~~fviADIPGLIEGAs~ 225 (296)
T TIGR02729 160 DVGLVGFPNAGKSTLLSAIS-NAKPKIADYPFTTLEPNLGVVRVDDNKY-------------ERSFVIADIPGLIEGASE 225 (296)
T ss_pred EEEEECCCCCCHHHHHHHHH-CCCCEECCCCCCCCCCCEEEEEECCCCE-------------EEEEEEEECCCCHHHHHC
T ss_conf 02103578874688888876-2788223878745653112898748741-------------688999856861566626
Q ss_pred CCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 466328999987303747885012345421134577673215788988887
Q gi|254780226|r 84 GEGLGNQFLAHIREVDAIIHVLRCFKDENIIHVEGRIDPINDIETIETELM 134 (367)
Q Consensus 84 G~GlGN~FL~~ir~aDalihVVdaf~~~~v~~~~g~~DP~~Di~~i~~EL~ 134 (367)
T Consensus 226 G~GLG~~FLKHIERt~~L~hviD~~~~-qlS-kh~~~~p~~~y~~l~~EL~ 274 (296)
T TIGR02729 226 GKGLGHKFLKHIERTRLLLHVIDASGI-QLS-KHDGRDPIEDYETLRNELE 274 (296)
T ss_pred CCCCCHHHHHHHHHEEEEEEEEECCCC-EEE-ECCCCCHHHHHHHHHHHHH
T ss_conf 887533554575202668879806875-342-4289888999999999997