HHsearch alignment for GI: 254780226 and conserved domain: TIGR02788
>TIGR02788 VirB11 P-type DNA transfer ATPase VirB11; InterPro: IPR014155 This entry contains VirB11, a protein that is found in the vir locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for DNA transfer . VirB11 is believed to be an ATPase and is a homologue of the P-like conjugation system TrbB protein and the Flp pilus system protein TadA ..
Probab=93.25 E-value=0.065 Score=32.66 Aligned_cols=21 Identities=33% Similarity=0.412 Sum_probs=17.2
Q ss_pred EEEEECCCCCHHHHHHHHHCC
Q ss_conf 867528887888999987404
Q gi|254780226|r 5 CGIIGLPNVGKSTLFNALTRT 25 (367)
Q Consensus 5 iGlvG~pn~GKST~f~alT~~ 25 (367)
T Consensus 161 Iii~GGTgSGKTTf~kal~~~ 181 (328)
T TIGR02788 161 IIISGGTGSGKTTFLKALVKE 181 (328)
T ss_pred EEEEECCCCHHHHHHHHHHHC
T ss_conf 999906897189999999732