HHsearch alignment for GI: 254780226 and conserved domain: TIGR03596
>TIGR03596 GTPase_YlqF ribosome biogenesis GTP-binding protein YlqF. Members of this protein family are GTP-binding proteins involved in ribosome biogenesis, including the essential YlqF protein of Bacillus subtilis, which is an essential protein. They are related to Era, EngA, and other GTPases of ribosome biogenesis, but are circularly permuted. This family is not universal, and is not present in Escherichia coli, and so is not as well studied as some other GTPases. This model is built for bacterial members.
Probab=98.86 E-value=3e-09 Score=82.13 Aligned_cols=59 Identities=31% Similarity=0.464 Sum_probs=45.7
Q ss_pred CCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCC
Q ss_conf 8248675288878889999874048987366686744883379976855587776421865023357999851223543
Q gi|254780226|r 2 GFKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRG 80 (367)
Q Consensus 2 ~~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~g 80 (367)
T Consensus 118 ~i~v~vVG~PNVGKSSlIN~L~~~k~~~v~~~PG~Tr~--~q~i~l~------------------~~i~llDtPGvl~P 176 (276)
T TIGR03596 118 PIRAMIVGIPNVGKSTLINRLAGKKVAKVGNRPGVTKG--QQWIKLS------------------DGLELLDTPGILWP 176 (276)
T ss_pred CEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCE--EEEEEEC------------------CCEEEECCCCCCCC
T ss_conf 63899972798758999998736725877796542102--5899957------------------97799668874578