HHsearch alignment for GI: 254780226 and conserved domain: TIGR03598
>TIGR03598 GTPase_YsxC ribosome biogenesis GTP-binding protein YsxC/EngB. Members of this protein family are a GTPase associated with ribosome biogenesis, typified by YsxC from Bacillus subutilis. The family is widely but not universally distributed among bacteria. Members commonly are called EngB based on homology to EngA, one of several other GTPases of ribosome biogenesis. Cutoffs as set find essentially all bacterial members, but also identify large numbers of eukaryotic (probably organellar) sequences. This protein is found in about 80 percent of bacterial genomes.
Probab=99.49 E-value=1e-13 Score=112.18 Aligned_cols=55 Identities=36% Similarity=0.377 Sum_probs=40.9
Q ss_pred CEEEEEECCCCCHHHHHHHHHCCCC-CCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCC
Q ss_conf 2486752888788899998740489-87366686744883379976855587776421865023357999851223
Q gi|254780226|r 3 FKCGIIGLPNVGKSTLFNALTRTAS-AQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGL 77 (367)
Q Consensus 3 ~kiGlvG~pn~GKST~f~alT~~~~-~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGL 77 (367)
T Consensus 19 p~IaivGrpNvGKSTL~N~L~g~k~~a~vs~~pGtTr~i~~~~~--------------------~~~~~lvDtpGy 74 (179)
T TIGR03598 19 PEIAFAGRSNVGKSSLINALTNRKKLARTSKTPGRTQLINFFEV--------------------NDGFRLVDLPGY 74 (179)
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEE--------------------CCCEEEEECCCH
T ss_conf 78999869998889999998689855897089973660232010--------------------473699977760