HHsearch alignment for GI: 254780226 and conserved domain: cd03224

>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=94.14  E-value=0.051  Score=33.37  Aligned_cols=32  Identities=25%  Similarity=0.504  Sum_probs=25.7

Q ss_pred             EEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf             86752888788899998740489873666867448833799768
Q gi|254780226|r    5 CGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVP   48 (367)
Q Consensus         5 iGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~   48 (367)
T Consensus        29 ~~liG~nGaGKSTLl~~i~Gl~------------~p~~G~I~~~   60 (222)
T cd03224          29 VALLGRNGAGKTTLLKTIMGLL------------PPRSGSIRFD   60 (222)
T ss_pred             EEEECCCCCCHHHHHHHHHCCC------------CCCCEEEEEC
T ss_conf             9999999985999999997798------------8996099999