HHsearch alignment for GI: 254780226 and conserved domain: cd03254
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=94.51 E-value=0.038 Score=34.23 Aligned_cols=36 Identities=33% Similarity=0.595 Sum_probs=27.7
Q ss_pred CCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 824867528887888999987404898736668674488337997685
Q gi|254780226|r 2 GFKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPD 49 (367)
Q Consensus 2 ~~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d 49 (367)
T Consensus 29 Ge~vaivG~sGsGKSTLl~ll~gl~------------~p~~G~I~idg 64 (229)
T cd03254 29 GETVAIVGPTGAGKTTLINLLMRFY------------DPQKGQILIDG 64 (229)
T ss_pred CCEEEEECCCCCHHHHHHHHHHCCC------------CCCCCEEEECC
T ss_conf 9999999999980999999996686------------67873899999