HHsearch alignment for GI: 254780226 and conserved domain: cd03256
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=93.29 E-value=0.077 Score=32.16 Aligned_cols=33 Identities=39% Similarity=0.622 Sum_probs=26.3
Q ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 867528887888999987404898736668674488337997685
Q gi|254780226|r 5 CGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPD 49 (367)
Q Consensus 5 iGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d 49 (367)
T Consensus 30 ~~iiGpsGsGKSTLl~~i~gl~------------~p~~G~I~~~g 62 (241)
T cd03256 30 VALIGPSGAGKSTLLRCLNGLV------------EPTSGSVLIDG 62 (241)
T ss_pred EEEECCCCCHHHHHHHHHHCCC------------CCCCEEEEECC
T ss_conf 9999999833999999997499------------99855999999