HHsearch alignment for GI: 254780226 and conserved domain: cd03264
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=92.86 E-value=0.096 Score=31.53 Aligned_cols=34 Identities=29% Similarity=0.574 Sum_probs=27.1
Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 4867528887888999987404898736668674488337997685
Q gi|254780226|r 4 KCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPD 49 (367)
Q Consensus 4 kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d 49 (367)
T Consensus 27 i~gllGpNGAGKSTll~~i~Gl~------------~p~sG~i~i~g 60 (211)
T cd03264 27 MYGLLGPNGAGKTTLMRILATLT------------PPSSGTIRIDG 60 (211)
T ss_pred EEEEECCCCCHHHHHHHHHHCCC------------CCCCEEEEECC
T ss_conf 59999999823999999997596------------68962999999