HHsearch alignment for GI: 254780226 and conserved domain: cd03269
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=93.11 E-value=0.091 Score=31.69 Aligned_cols=33 Identities=30% Similarity=0.492 Sum_probs=26.3
Q ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 867528887888999987404898736668674488337997685
Q gi|254780226|r 5 CGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPD 49 (367)
Q Consensus 5 iGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d 49 (367)
T Consensus 29 ~gllG~NGaGKTTll~~i~Gl~------------~p~~G~i~i~G 61 (210)
T cd03269 29 FGLLGPNGAGKTTTIRMILGII------------LPDSGEVLFDG 61 (210)
T ss_pred EEEECCCCCCHHHHHHHHHCCC------------CCCCCEEEECC
T ss_conf 9999899984999999996002------------66899899999