HHsearch alignment for GI: 254780226 and conserved domain: cd04122

>cd04122 Rab14 Rab14 subfamily. Rab14 GTPases are localized to biosynthetic compartments, including the rough ER, the Golgi complex, and the trans-Golgi network, and to endosomal compartments, including early endosomal vacuoles and associated vesicles. Rab14 is believed to function in both the biosynthetic and recycling pathways between the Golgi and endosomal compartments. Rab14 has also been identified on GLUT4 vesicles, and has been suggested to help regulate GLUT4 translocation. In addition, Rab14 is believed to play a role in the regulation of phagocytosis. GTPase activating proteins (GAPs) interact with GTP-bound Rab and accelerate the hydrolysis of GTP to GDP. Guanine nucleotide exchange factors (GEFs) interact with GDP-bound Rabs to promote the formation of the GTP-bound state. Rabs are further regulated by guanine nucleotide dissociation inhibitors (GDIs), which facilitate Rab recycling by masking C-terminal lipid binding and promoting cytosolic localization. Most Rab GT
Probab=98.07  E-value=7.2e-05  Score=52.59  Aligned_cols=149  Identities=21%  Similarity=0.303  Sum_probs=86.9

Q ss_pred             CCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE--EECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCC
Q ss_conf             8248675288878889999874048987366686744883379--97685558777642186502335799985122354
Q gi|254780226|r    2 GFKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGE--VAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVR   79 (367)
Q Consensus         2 ~~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~--~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~   79 (367)
T Consensus         2 ~~KivlvGd~~VGKTsli~r~~~~--~f~~~~~-~Tig~~~~~k~i~~------------~~~---~~~l~iwDtaG~e-   62 (166)
T cd04122           2 IFKYIIIGDMGVGKSCLLHQFTEK--KFMADCP-HTIGVEFGTRIIEV------------NGQ---KIKLQIWDTAGQE-   62 (166)
T ss_pred             EEEEEEECCCCCCHHHHHHHHHCC--CCCCCCC-CCCCEEEEEEEEEE------------CCE---EEEEEEEECCCCC-
T ss_conf             499999999995799999999129--8899999-97446889999999------------999---9999999899985-


Q ss_pred             CCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
Q ss_conf             32224663289999873037478850123454211345776732157889888876433222457777787520320467
Q gi|254780226|r   80 GASKGEGLGNQFLAHIREVDAIIHVLRCFKDENIIHVEGRIDPINDIETIETELMLSDLERLERLFEKNKKYRNHKSEEI  159 (367)
Q Consensus        80 gA~~G~GlGN~FL~~ir~aDalihVVdaf~~~~v~~~~g~~DP~~Di~~i~~EL~l~dle~lek~~~k~~k~~~~~~~~~  159 (367)
T Consensus        63 ---~~~~~~~---~~~~~a~~~ilvydvt~~~-------S------f------------~~l~-~w--------------   96 (166)
T cd04122          63 ---RFRAVTR---SYYRGAAGALMVYDITRRS-------T------Y------------NHLS-SW--------------   96 (166)
T ss_pred             ---CCCCCCH---HHEECCCEEEEEECCCCHH-------H------H------------HHHH-HH--------------
T ss_conf             ---4442521---1143154659972587476-------7------9------------9999-99--------------


Q ss_pred             HHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCHHEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf             77899999889988758741034431326777621023576410100100343011101013467877886436984033
Q gi|254780226|r  160 VLLQSIISSSLRLIEEGKPVRSLLESLDSDAIPIFKSLNLLTAKPILYICNVSEHDCKKGNIYTEAVQRLASQQNAEMII  239 (367)
Q Consensus       160 ~~~~~~l~~~~~~Le~~~~~r~~~~~~~~de~~~l~~~~llt~KP~iivaNk~e~~~~~~n~~~e~i~~l~~~~~~~~i~  239 (367)
T Consensus        97 -------------~~~---~~~~-----------~~-----~~~~iilVGNK~DL~~~r-~V~~~e~~~~a~~~~~~~~E  143 (166)
T cd04122          97 -------------LTD---ARNL-----------TN-----PNTVIFLIGNKADLEAQR-DVTYEEAKQFADENGLLFLE  143 (166)
T ss_pred             -------------HHH---HHHH-----------CC-----CCCEEEECCCCCCHHHCC-CCCHHHHHHHHHHCCCEEEE
T ss_conf             -------------999---9985-----------69-----997587034015744438-99999999999986998999


Q ss_pred             CCCHHHHHH
Q ss_conf             210024665
Q gi|254780226|r  240 ISAAIEAEI  248 (367)
Q Consensus       240 isa~~E~ei  248 (367)
T Consensus       144 ~SAk~g~nV  152 (166)
T cd04122         144 CSAKTGENV  152 (166)
T ss_pred             ECCCCCCCH
T ss_conf             865878088