HHsearch alignment for GI: 254780226 and conserved domain: cd04134

>cd04134 Rho3 Rho3 subfamily. Rho3 is a member of the Rho family found only in fungi. Rho3 is believed to regulate cell polarity by interacting with the diaphanous/formin family protein For3 to control both the actin cytoskeleton and microtubules. Rho3 is also believed to have a direct role in exocytosis that is independent of its role in regulating actin polarity. The function in exocytosis may be two-pronged: first, in the transport of post-Golgi vesicles from the mother cell to the bud, mediated by myosin (Myo2); second, in the docking and fusion of vesicles to the plasma membrane, mediated by an exocyst (Exo70) protein. Most Rho proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for membrane attachment, a key feature of most Rho proteins.
Probab=96.10  E-value=0.055  Score=33.17  Aligned_cols=81  Identities=25%  Similarity=0.250  Sum_probs=50.0

Q ss_pred             EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCC
Q ss_conf             48675288878889999874048987366686744883379976855587776421865023357999851223543222
Q gi|254780226|r    4 KCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGASK   83 (367)
Q Consensus         4 kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA~~   83 (367)
T Consensus         2 KivlvGd~~VGKTsli~r~~~~~--F~~~y~-~Ti----~~~~~~~-------~~v~~~---~v~l~iwDTaGqe~~---   61 (189)
T cd04134           2 KVVVLGDGACGKTSLLNVFTRGY--FPQVYE-PTV----FENYVHD-------IFVDGL---HIELSLWDTAGQEEF---   61 (189)
T ss_pred             EEEEECCCCCCHHHHHHHHHCCC--CCCCCC-CCE----EEEEEEE-------EEECCE---EEEEEEEECCCCCCC---
T ss_conf             89999979976999999997099--999868-837----8999999-------999999---999999847785000---


Q ss_pred             CCCCHHHHHHHHHCCCEEEEEECCC
Q ss_conf             4663289999873037478850123
Q gi|254780226|r   84 GEGLGNQFLAHIREVDAIIHVLRCF  108 (367)
Q Consensus        84 G~GlGN~FL~~ir~aDalihVVdaf  108 (367)
T Consensus        62 -~~i~~~---~y~~a~~~ilvydi~   82 (189)
T cd04134          62 -DRLRSL---SYADTDVIMLCFSVD   82 (189)
T ss_pred             -CHHHHH---HHCCCCEEEEEEECC
T ss_conf             -035567---643786459999789