HHsearch alignment for GI: 254780226 and conserved domain: cd04135
>cd04135 Tc10 TC10 subfamily. TC10 is a Rho family protein that has been shown to induce microspike formation and neurite outgrowth in vitro. Its expression changes dramatically after peripheral nerve injury, suggesting an important role in promoting axonal outgrowth and regeneration. TC10 regulates translocation of insulin-stimulated GLUT4 in adipocytes and has also been shown to bind directly to Golgi COPI coat proteins. GTP-bound TC10 in vitro can bind numerous potential effectors. Depending on its subcellular localization and distinct functional domains, TC10 can differentially regulate two types of filamentous actin in adipocytes. TC10 mRNAs are highly expressed in three types of mouse muscle tissues: leg skeletal muscle, cardiac muscle, and uterus; they were also present in brain, with higher levels in adults than in newborns. TC10 has also been shown to play a role in regulating the expression of cystic fibrosis transmembrane conductance regulator (CFTR) through interacti
Probab=97.81 E-value=0.00064 Score=46.20 Aligned_cols=82 Identities=20% Similarity=0.240 Sum_probs=50.9
Q ss_pred CEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEE-EEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC
Q ss_conf 24867528887888999987404898736668674488337-99768555877764218650233579998512235432
Q gi|254780226|r 3 FKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSG-EVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGA 81 (367)
Q Consensus 3 ~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g-~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA 81 (367)
T Consensus 1 ~Kiv~vGd~~VGKTsli~rf~~~-~-f~~~y~-pTi~~~~~~~i~v------------~~---~~~~l~i~DTaG~e~-- 60 (174)
T cd04135 1 LKCVVVGDGAVGKTCLLMSYAND-A-FPEEYV-PTVFDHYAVSVTV------------GG---KQYLLGLYDTAGQED-- 60 (174)
T ss_pred CEEEEECCCCCCHHHHHHHHHHC-C-CCCCCC-CEEEEEEEEEEEE------------CC---EEEEEEEEECCCCCC--
T ss_conf 98999998998599999999629-8-998868-8575202279999------------99---999999997976403--
Q ss_pred CCCCCCHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 2246632899998730374788501234
Q gi|254780226|r 82 SKGEGLGNQFLAHIREVDAIIHVLRCFK 109 (367)
Q Consensus 82 ~~G~GlGN~FL~~ir~aDalihVVdaf~ 109 (367)
T Consensus 61 --~~~~---~~~~~~~a~~~ilvydi~~ 83 (174)
T cd04135 61 --YDRL---RPLSYPMTDVFLICFSVVN 83 (174)
T ss_pred --CHHH---HHHHHCCCCEEEEEEECCC
T ss_conf --1556---5998557876789843797