HHsearch alignment for GI: 254780226 and conserved domain: cd04135

>cd04135 Tc10 TC10 subfamily. TC10 is a Rho family protein that has been shown to induce microspike formation and neurite outgrowth in vitro. Its expression changes dramatically after peripheral nerve injury, suggesting an important role in promoting axonal outgrowth and regeneration. TC10 regulates translocation of insulin-stimulated GLUT4 in adipocytes and has also been shown to bind directly to Golgi COPI coat proteins. GTP-bound TC10 in vitro can bind numerous potential effectors. Depending on its subcellular localization and distinct functional domains, TC10 can differentially regulate two types of filamentous actin in adipocytes. TC10 mRNAs are highly expressed in three types of mouse muscle tissues: leg skeletal muscle, cardiac muscle, and uterus; they were also present in brain, with higher levels in adults than in newborns. TC10 has also been shown to play a role in regulating the expression of cystic fibrosis transmembrane conductance regulator (CFTR) through interacti
Probab=97.81  E-value=0.00064  Score=46.20  Aligned_cols=82  Identities=20%  Similarity=0.240  Sum_probs=50.9

Q ss_pred             CEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEE-EEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC
Q ss_conf             24867528887888999987404898736668674488337-99768555877764218650233579998512235432
Q gi|254780226|r    3 FKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSG-EVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGA   81 (367)
Q Consensus         3 ~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g-~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA   81 (367)
T Consensus         1 ~Kiv~vGd~~VGKTsli~rf~~~-~-f~~~y~-pTi~~~~~~~i~v------------~~---~~~~l~i~DTaG~e~--   60 (174)
T cd04135           1 LKCVVVGDGAVGKTCLLMSYAND-A-FPEEYV-PTVFDHYAVSVTV------------GG---KQYLLGLYDTAGQED--   60 (174)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHC-C-CCCCCC-CEEEEEEEEEEEE------------CC---EEEEEEEEECCCCCC--
T ss_conf             98999998998599999999629-8-998868-8575202279999------------99---999999997976403--


Q ss_pred             CCCCCCHHHHHHHHHCCCEEEEEECCCC
Q ss_conf             2246632899998730374788501234
Q gi|254780226|r   82 SKGEGLGNQFLAHIREVDAIIHVLRCFK  109 (367)
Q Consensus        82 ~~G~GlGN~FL~~ir~aDalihVVdaf~  109 (367)
T Consensus        61 --~~~~---~~~~~~~a~~~ilvydi~~   83 (174)
T cd04135          61 --YDRL---RPLSYPMTDVFLICFSVVN   83 (174)
T ss_pred             --CHHH---HHHHHCCCCEEEEEEECCC
T ss_conf             --1556---5998557876789843797