HHsearch alignment for GI: 254780226 and conserved domain: cd04138

>cd04138 H_N_K_Ras_like H-Ras/N-Ras/K-Ras subfamily. H-Ras, N-Ras, and K-Ras4A/4B are the prototypical members of the Ras family. These isoforms generate distinct signal outputs despite interacting with a common set of activators and effectors, and are strongly associated with oncogenic progression in tumor initiation. Mutated versions of Ras that are insensitive to GAP stimulation (and are therefore constitutively active) are found in a significant fraction of human cancers. Many Ras guanine nucleotide exchange factors (GEFs) have been identified. They are sequestered in the cytosol until activation by growth factors triggers recruitment to the plasma membrane or Golgi, where the GEF colocalizes with Ras. Active (GTP-bound) Ras interacts with several effector proteins that stimulate a variety of diverse cytoplasmic signaling activities. Some are known to positively mediate the oncogenic properties of Ras, including Raf, phosphatidylinositol 3-kinase (PI3K), RalGEFs, and Tiam1.
Probab=98.20  E-value=3.3e-05  Score=54.90  Aligned_cols=147  Identities=18%  Similarity=0.225  Sum_probs=84.2

Q ss_pred             CEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCC
Q ss_conf             24867528887888999987404898736668674488337997685558777642186502335799985122354322
Q gi|254780226|r    3 FKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGAS   82 (367)
Q Consensus         3 ~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA~   82 (367)
T Consensus         2 ~KvvlvGd~~VGKTsli~r~~~~-~-F~~~y~-~T----i~~~~~k~~-------~i~~~---~~~l~iwDtaG~e~~--   62 (162)
T cd04138           2 YKLVVVGAGGVGKSALTIQLIQN-H-FVDEYD-PT----IEDSYRKQV-------VIDGE---TCLLDILDTAGQEEY--   62 (162)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHC-C-CCCCCC-CC----CCCEEEEEE-------EECCE---EEEEEEEECCCCCCC--
T ss_conf             39999899998899999999839-2-887568-85----552799999-------99999---999999979986011--


Q ss_pred             CCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf             24663289999873037478850123454211345776732157889888876433222457777787520320467778
Q gi|254780226|r   83 KGEGLGNQFLAHIREVDAIIHVLRCFKDENIIHVEGRIDPINDIETIETELMLSDLERLERLFEKNKKYRNHKSEEIVLL  162 (367)
Q Consensus        83 ~G~GlGN~FL~~ir~aDalihVVdaf~~~~v~~~~g~~DP~~Di~~i~~EL~l~dle~lek~~~k~~k~~~~~~~~~~~~  162 (367)
T Consensus        63 --~~l~~---~~~~~a~~~ilvydvt~~~S----------f~~---------------v~~w~~~i--------------   98 (162)
T cd04138          63 --SAMRD---QYMRTGEGFLCVFAINSRKS----------FED---------------IHTYREQI--------------   98 (162)
T ss_pred             --CHHHH---HHHCCCCEEEEEEECCCHHH----------HHH---------------HHHHHHHH--------------
T ss_conf             --14789---87157877999961798899----------998---------------99999999--------------


Q ss_pred             HHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCHHEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             99999889988758741034431326777621023576410100100343011101013467877886436984033210
Q gi|254780226|r  163 QSIISSSLRLIEEGKPVRSLLESLDSDAIPIFKSLNLLTAKPILYICNVSEHDCKKGNIYTEAVQRLASQQNAEMIIISA  242 (367)
Q Consensus       163 ~~~l~~~~~~Le~~~~~r~~~~~~~~de~~~l~~~~llt~KP~iivaNk~e~~~~~~n~~~e~i~~l~~~~~~~~i~isa  242 (367)
T Consensus        99 -----------~~------------------~~~---~~~~piilVgNK~Dl~~--r~V~~~e~~~~a~~~~~~f~E~SA  144 (162)
T cd04138          99 -----------KR------------------VKD---SDDVPMVLVGNKCDLAA--RTVSSRQGQDLAKSYGIPYIETSA  144 (162)
T ss_pred             -----------HH------------------HCC---CCCCEEEEEEEECCHHH--CCCCHHHHHHHHHHCCCEEEEECC
T ss_conf             -----------98------------------548---88854999976535645--558899999999980998999738


Q ss_pred             HHHH
Q ss_conf             0246
Q gi|254780226|r  243 AIEA  246 (367)
Q Consensus       243 ~~E~  246 (367)
T Consensus       145 k~~~  148 (162)
T cd04138         145 KTRQ  148 (162)
T ss_pred             CCCC
T ss_conf             9985