HHsearch alignment for GI: 254780226 and conserved domain: cd04138
>cd04138 H_N_K_Ras_like H-Ras/N-Ras/K-Ras subfamily. H-Ras, N-Ras, and K-Ras4A/4B are the prototypical members of the Ras family. These isoforms generate distinct signal outputs despite interacting with a common set of activators and effectors, and are strongly associated with oncogenic progression in tumor initiation. Mutated versions of Ras that are insensitive to GAP stimulation (and are therefore constitutively active) are found in a significant fraction of human cancers. Many Ras guanine nucleotide exchange factors (GEFs) have been identified. They are sequestered in the cytosol until activation by growth factors triggers recruitment to the plasma membrane or Golgi, where the GEF colocalizes with Ras. Active (GTP-bound) Ras interacts with several effector proteins that stimulate a variety of diverse cytoplasmic signaling activities. Some are known to positively mediate the oncogenic properties of Ras, including Raf, phosphatidylinositol 3-kinase (PI3K), RalGEFs, and Tiam1.
Probab=98.20 E-value=3.3e-05 Score=54.90 Aligned_cols=147 Identities=18% Similarity=0.225 Sum_probs=84.2
Q ss_pred CEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCC
Q ss_conf 24867528887888999987404898736668674488337997685558777642186502335799985122354322
Q gi|254780226|r 3 FKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGAS 82 (367)
Q Consensus 3 ~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA~ 82 (367)
T Consensus 2 ~KvvlvGd~~VGKTsli~r~~~~-~-F~~~y~-~T----i~~~~~k~~-------~i~~~---~~~l~iwDtaG~e~~-- 62 (162)
T cd04138 2 YKLVVVGAGGVGKSALTIQLIQN-H-FVDEYD-PT----IEDSYRKQV-------VIDGE---TCLLDILDTAGQEEY-- 62 (162)
T ss_pred EEEEEECCCCCCHHHHHHHHHHC-C-CCCCCC-CC----CCCEEEEEE-------EECCE---EEEEEEEECCCCCCC--
T ss_conf 39999899998899999999839-2-887568-85----552799999-------99999---999999979986011--
Q ss_pred CCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 24663289999873037478850123454211345776732157889888876433222457777787520320467778
Q gi|254780226|r 83 KGEGLGNQFLAHIREVDAIIHVLRCFKDENIIHVEGRIDPINDIETIETELMLSDLERLERLFEKNKKYRNHKSEEIVLL 162 (367)
Q Consensus 83 ~G~GlGN~FL~~ir~aDalihVVdaf~~~~v~~~~g~~DP~~Di~~i~~EL~l~dle~lek~~~k~~k~~~~~~~~~~~~ 162 (367)
T Consensus 63 --~~l~~---~~~~~a~~~ilvydvt~~~S----------f~~---------------v~~w~~~i-------------- 98 (162)
T cd04138 63 --SAMRD---QYMRTGEGFLCVFAINSRKS----------FED---------------IHTYREQI-------------- 98 (162)
T ss_pred --CHHHH---HHHCCCCEEEEEEECCCHHH----------HHH---------------HHHHHHHH--------------
T ss_conf --14789---87157877999961798899----------998---------------99999999--------------
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCHHEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99999889988758741034431326777621023576410100100343011101013467877886436984033210
Q gi|254780226|r 163 QSIISSSLRLIEEGKPVRSLLESLDSDAIPIFKSLNLLTAKPILYICNVSEHDCKKGNIYTEAVQRLASQQNAEMIIISA 242 (367)
Q Consensus 163 ~~~l~~~~~~Le~~~~~r~~~~~~~~de~~~l~~~~llt~KP~iivaNk~e~~~~~~n~~~e~i~~l~~~~~~~~i~isa 242 (367)
T Consensus 99 -----------~~------------------~~~---~~~~piilVgNK~Dl~~--r~V~~~e~~~~a~~~~~~f~E~SA 144 (162)
T cd04138 99 -----------KR------------------VKD---SDDVPMVLVGNKCDLAA--RTVSSRQGQDLAKSYGIPYIETSA 144 (162)
T ss_pred -----------HH------------------HCC---CCCCEEEEEEEECCHHH--CCCCHHHHHHHHHHCCCEEEEECC
T ss_conf -----------98------------------548---88854999976535645--558899999999980998999738
Q ss_pred HHHH
Q ss_conf 0246
Q gi|254780226|r 243 AIEA 246 (367)
Q Consensus 243 ~~E~ 246 (367)
T Consensus 145 k~~~ 148 (162)
T cd04138 145 KTRQ 148 (162)
T ss_pred CCCC
T ss_conf 9985