HHsearch alignment for GI: 254780226 and conserved domain: cd04143

>cd04143 Rhes_like Rhes_like subfamily. This subfamily includes Rhes (Ras homolog enriched in striatum) and Dexras1/AGS1 (activator of G-protein signaling 1). These proteins are homologous, but exhibit significant differences in tissue distribution and subcellular localization. Rhes is found primarily in the striatum of the brain, but is also expressed in other areas of the brain, such as the cerebral cortex, hippocampus, inferior colliculus, and cerebellum. Rhes expression is controlled by thyroid hormones. In rat PC12 cells, Rhes is farnesylated and localizes to the plasma membrane. Rhes binds and activates PI3K, and plays a role in coupling serpentine membrane receptors with heterotrimeric G-protein signaling. Rhes has recently been shown to be reduced under conditions of dopamine supersensitivity and may play a role in determining dopamine receptor sensitivity. Dexras1/AGS1 is a dexamethasone-induced Ras protein that is expressed primarily in the brain, with low expression l
Probab=98.15  E-value=0.00024  Score=49.06  Aligned_cols=157  Identities=16%  Similarity=0.225  Sum_probs=88.1

Q ss_pred             CEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC-EEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC
Q ss_conf             248675288878889999874048987366686744883-3799768555877764218650233579998512235432
Q gi|254780226|r    3 FKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPN-SGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGA   81 (367)
Q Consensus         3 ~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn-~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA   81 (367)
T Consensus         1 yKIvvlGdsgVGKTSLi~Rf~~~~--F~~~y~-pTi~d~~~k~i~i------------~g~---~v~L~IwDTaGq----   58 (247)
T cd04143           1 YRMVVLGASKVGKTAIVSRFLGGR--FEEQYT-PTIEDFHRKLYSI------------RGE---VYQLDILDTSGN----   58 (247)
T ss_pred             CEEEEECCCCCCHHHHHHHHHCCC--CCCCCC-CCHHHEEEEEEEE------------CCE---EEEEEEEECCCC----
T ss_conf             979999989978999999996496--899878-8835318899999------------999---999999967665----


Q ss_pred             CCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf             22466328999987303747885012345421134577673215788988887643322245777778752032046777
Q gi|254780226|r   82 SKGEGLGNQFLAHIREVDAIIHVLRCFKDENIIHVEGRIDPINDIETIETELMLSDLERLERLFEKNKKYRNHKSEEIVL  161 (367)
Q Consensus        82 ~~G~GlGN~FL~~ir~aDalihVVdaf~~~~v~~~~g~~DP~~Di~~i~~EL~l~dle~lek~~~k~~k~~~~~~~~~~~  161 (367)
T Consensus        59 e~f~sl~~~y---~~~a~~~IlVYDITnr~-------S---Fe~v-------~~w~~~I~e~k~~~--------------  104 (247)
T cd04143          59 HPFPAMRRLS---ILTGDVFILVFSLDNRE-------S---FEEV-------CRLREQILETKSCL--------------  104 (247)
T ss_pred             CCCCCCHHHH---HHCCCEEEEEEECCCHH-------H---HHHH-------HHHHHHHHHHHCCC--------------
T ss_conf             3687442013---12177899999799878-------9---9989-------99999999864001--------------


Q ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCHHEECCCHHHHCCCHHHHHHHHHH-HHHCCCCCCCC
Q ss_conf             89999988998875874103443132677762102357641010010034301110101346787788-64369840332
Q gi|254780226|r  162 LQSIISSSLRLIEEGKPVRSLLESLDSDAIPIFKSLNLLTAKPILYICNVSEHDCKKGNIYTEAVQRL-ASQQNAEMIII  240 (367)
Q Consensus       162 ~~~~l~~~~~~Le~~~~~r~~~~~~~~de~~~l~~~~llt~KP~iivaNk~e~~~~~~n~~~e~i~~l-~~~~~~~~i~i  240 (367)
T Consensus       105 ------------~~----~------~~-------~---~~~vpiiLVGNK~DL~~~R-~Vs~eEa~~~~A~~~~~~f~Et  151 (247)
T cd04143         105 ------------KN----K------TK-------E---NVKIPMVICGNKADRDFPR-EVQRDEVEQLVGGDENCAYFEV  151 (247)
T ss_pred             ------------CC----C------CC-------C---CCCCCEEEEEECCCCHHCC-CCCHHHHHHHHHHHCCCEEEEC
T ss_conf             ------------00----1------35-------7---8887589986655432017-8799999999997689879988


Q ss_pred             CCHHHHHH
Q ss_conf             10024665
Q gi|254780226|r  241 SAAIEAEI  248 (367)
Q Consensus       241 sa~~E~ei  248 (367)
T Consensus       152 SAKt~~NV  159 (247)
T cd04143         152 SAKKNSNL  159 (247)
T ss_pred             CCCCCCCH
T ss_conf             78999498