HHsearch alignment for GI: 254780226 and conserved domain: cd04143
>cd04143 Rhes_like Rhes_like subfamily. This subfamily includes Rhes (Ras homolog enriched in striatum) and Dexras1/AGS1 (activator of G-protein signaling 1). These proteins are homologous, but exhibit significant differences in tissue distribution and subcellular localization. Rhes is found primarily in the striatum of the brain, but is also expressed in other areas of the brain, such as the cerebral cortex, hippocampus, inferior colliculus, and cerebellum. Rhes expression is controlled by thyroid hormones. In rat PC12 cells, Rhes is farnesylated and localizes to the plasma membrane. Rhes binds and activates PI3K, and plays a role in coupling serpentine membrane receptors with heterotrimeric G-protein signaling. Rhes has recently been shown to be reduced under conditions of dopamine supersensitivity and may play a role in determining dopamine receptor sensitivity. Dexras1/AGS1 is a dexamethasone-induced Ras protein that is expressed primarily in the brain, with low expression l
Probab=98.15 E-value=0.00024 Score=49.06 Aligned_cols=157 Identities=16% Similarity=0.225 Sum_probs=88.1
Q ss_pred CEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC-EEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC
Q ss_conf 248675288878889999874048987366686744883-3799768555877764218650233579998512235432
Q gi|254780226|r 3 FKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPN-SGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGA 81 (367)
Q Consensus 3 ~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn-~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA 81 (367)
T Consensus 1 yKIvvlGdsgVGKTSLi~Rf~~~~--F~~~y~-pTi~d~~~k~i~i------------~g~---~v~L~IwDTaGq---- 58 (247)
T cd04143 1 YRMVVLGASKVGKTAIVSRFLGGR--FEEQYT-PTIEDFHRKLYSI------------RGE---VYQLDILDTSGN---- 58 (247)
T ss_pred CEEEEECCCCCCHHHHHHHHHCCC--CCCCCC-CCHHHEEEEEEEE------------CCE---EEEEEEEECCCC----
T ss_conf 979999989978999999996496--899878-8835318899999------------999---999999967665----
Q ss_pred CCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 22466328999987303747885012345421134577673215788988887643322245777778752032046777
Q gi|254780226|r 82 SKGEGLGNQFLAHIREVDAIIHVLRCFKDENIIHVEGRIDPINDIETIETELMLSDLERLERLFEKNKKYRNHKSEEIVL 161 (367)
Q Consensus 82 ~~G~GlGN~FL~~ir~aDalihVVdaf~~~~v~~~~g~~DP~~Di~~i~~EL~l~dle~lek~~~k~~k~~~~~~~~~~~ 161 (367)
T Consensus 59 e~f~sl~~~y---~~~a~~~IlVYDITnr~-------S---Fe~v-------~~w~~~I~e~k~~~-------------- 104 (247)
T cd04143 59 HPFPAMRRLS---ILTGDVFILVFSLDNRE-------S---FEEV-------CRLREQILETKSCL-------------- 104 (247)
T ss_pred CCCCCCHHHH---HHCCCEEEEEEECCCHH-------H---HHHH-------HHHHHHHHHHHCCC--------------
T ss_conf 3687442013---12177899999799878-------9---9989-------99999999864001--------------
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCHHEECCCHHHHCCCHHHHHHHHHH-HHHCCCCCCCC
Q ss_conf 89999988998875874103443132677762102357641010010034301110101346787788-64369840332
Q gi|254780226|r 162 LQSIISSSLRLIEEGKPVRSLLESLDSDAIPIFKSLNLLTAKPILYICNVSEHDCKKGNIYTEAVQRL-ASQQNAEMIII 240 (367)
Q Consensus 162 ~~~~l~~~~~~Le~~~~~r~~~~~~~~de~~~l~~~~llt~KP~iivaNk~e~~~~~~n~~~e~i~~l-~~~~~~~~i~i 240 (367)
T Consensus 105 ------------~~----~------~~-------~---~~~vpiiLVGNK~DL~~~R-~Vs~eEa~~~~A~~~~~~f~Et 151 (247)
T cd04143 105 ------------KN----K------TK-------E---NVKIPMVICGNKADRDFPR-EVQRDEVEQLVGGDENCAYFEV 151 (247)
T ss_pred ------------CC----C------CC-------C---CCCCCEEEEEECCCCHHCC-CCCHHHHHHHHHHHCCCEEEEC
T ss_conf ------------00----1------35-------7---8887589986655432017-8799999999997689879988
Q ss_pred CCHHHHHH
Q ss_conf 10024665
Q gi|254780226|r 241 SAAIEAEI 248 (367)
Q Consensus 241 sa~~E~ei 248 (367)
T Consensus 152 SAKt~~NV 159 (247)
T cd04143 152 SAKKNSNL 159 (247)
T ss_pred CCCCCCCH
T ss_conf 78999498