HHsearch alignment for GI: 254780226 and conserved domain: cd04172

>cd04172 Rnd3_RhoE_Rho8 Rnd3/RhoE/Rho8 subfamily. Rnd3/RhoE/Rho8 is a member of the novel Rho subfamily Rnd, together with Rnd1/Rho6 and Rnd2/Rho7. Rnd3/RhoE is known to bind the serine-threonine kinase ROCK I. Unphosphorylated Rnd3/RhoE associates primarily with membranes, but ROCK I-phosphorylated Rnd3/RhoE localizes in the cytosol. Phosphorylation of Rnd3/RhoE correlates with its activity in disrupting RhoA-induced stress fibers and inhibiting Ras-induced fibroblast transformation. In cells that lack stress fibers, such as macrophages and monocytes, Rnd3/RhoE induces a redistribution of actin, causing morphological changes in the cell. In addition, Rnd3/RhoE has been shown to inhibit cell cycle progression in G1 phase at a point upstream of the pRb family pocket protein checkpoint. Rnd3/RhoE has also been shown to inhibit Ras- and Raf-induced fibroblast transformation. In mammary epithelial tumor cells, Rnd3/RhoE regulates the assembly of the apical junction complex and tight
Probab=95.88  E-value=0.094  Score=31.60  Aligned_cols=83  Identities=17%  Similarity=0.216  Sum_probs=49.7

Q ss_pred             CCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC
Q ss_conf             82486752888788899998740489873666867448833799768555877764218650233579998512235432
Q gi|254780226|r    2 GFKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGA   81 (367)
Q Consensus         2 ~~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA   81 (367)
T Consensus         5 k~KivlvGd~~VGKTsLi~r~~~~~--F~~~y~-pTi~~~~~-~~~----------~i~~---~~v~l~iwDTaGq----   63 (182)
T cd04172           5 KCKIVVVGDSQCGKTALLHVFAKDC--FPENYV-PTVFENYT-ASF----------EIDT---QRIELSLWDTSGS----   63 (182)
T ss_pred             EEEEEEECCCCCCHHHHHHHHHHCC--CCCCCC-CEEEEEEE-EEE----------EECC---EEEEEEEEECCCC----
T ss_conf             4899999999989999999998399--999868-73532268-999----------9999---9999999968986----


Q ss_pred             CCCCCCHHHHHHHHHCCCEEEEEECCC
Q ss_conf             224663289999873037478850123
Q gi|254780226|r   82 SKGEGLGNQFLAHIREVDAIIHVLRCF  108 (367)
Q Consensus        82 ~~G~GlGN~FL~~ir~aDalihVVdaf  108 (367)
T Consensus        64 e~f~~l~~~~---y~~~~~~ilvydit   87 (182)
T cd04172          64 PYYDNVRPLS---YPDSDAVLICFDIS   87 (182)
T ss_pred             HHCCCCCHHH---HCCCCEEEEEEECC
T ss_conf             2012212555---12787899996489