HHsearch alignment for GI: 254780226 and conserved domain: cd04172
>cd04172 Rnd3_RhoE_Rho8 Rnd3/RhoE/Rho8 subfamily. Rnd3/RhoE/Rho8 is a member of the novel Rho subfamily Rnd, together with Rnd1/Rho6 and Rnd2/Rho7. Rnd3/RhoE is known to bind the serine-threonine kinase ROCK I. Unphosphorylated Rnd3/RhoE associates primarily with membranes, but ROCK I-phosphorylated Rnd3/RhoE localizes in the cytosol. Phosphorylation of Rnd3/RhoE correlates with its activity in disrupting RhoA-induced stress fibers and inhibiting Ras-induced fibroblast transformation. In cells that lack stress fibers, such as macrophages and monocytes, Rnd3/RhoE induces a redistribution of actin, causing morphological changes in the cell. In addition, Rnd3/RhoE has been shown to inhibit cell cycle progression in G1 phase at a point upstream of the pRb family pocket protein checkpoint. Rnd3/RhoE has also been shown to inhibit Ras- and Raf-induced fibroblast transformation. In mammary epithelial tumor cells, Rnd3/RhoE regulates the assembly of the apical junction complex and tight
Probab=95.88 E-value=0.094 Score=31.60 Aligned_cols=83 Identities=17% Similarity=0.216 Sum_probs=49.7
Q ss_pred CCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC
Q ss_conf 82486752888788899998740489873666867448833799768555877764218650233579998512235432
Q gi|254780226|r 2 GFKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGA 81 (367)
Q Consensus 2 ~~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA 81 (367)
T Consensus 5 k~KivlvGd~~VGKTsLi~r~~~~~--F~~~y~-pTi~~~~~-~~~----------~i~~---~~v~l~iwDTaGq---- 63 (182)
T cd04172 5 KCKIVVVGDSQCGKTALLHVFAKDC--FPENYV-PTVFENYT-ASF----------EIDT---QRIELSLWDTSGS---- 63 (182)
T ss_pred EEEEEEECCCCCCHHHHHHHHHHCC--CCCCCC-CEEEEEEE-EEE----------EECC---EEEEEEEEECCCC----
T ss_conf 4899999999989999999998399--999868-73532268-999----------9999---9999999968986----
Q ss_pred CCCCCCHHHHHHHHHCCCEEEEEECCC
Q ss_conf 224663289999873037478850123
Q gi|254780226|r 82 SKGEGLGNQFLAHIREVDAIIHVLRCF 108 (367)
Q Consensus 82 ~~G~GlGN~FL~~ir~aDalihVVdaf 108 (367)
T Consensus 64 e~f~~l~~~~---y~~~~~~ilvydit 87 (182)
T cd04172 64 PYYDNVRPLS---YPDSDAVLICFDIS 87 (182)
T ss_pred HHCCCCCHHH---HCCCCEEEEEEECC
T ss_conf 2012212555---12787899996489