HHsearch alignment for GI: 254780226 and conserved domain: pfam09439
>pfam09439 SRPRB Signal recognition particle receptor beta subunit. The beta subunit of the signal recognition particle receptor (SRP) is a transmembrane GTPase which anchors the alpha subunit to the endoplasmic reticulum membrane.
Probab=98.97 E-value=6.7e-09 Score=79.77 Aligned_cols=80 Identities=21% Similarity=0.383 Sum_probs=56.6
Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCC
Q ss_conf 48675288878889999874048987366686744883379976855587776421865023357999851223543222
Q gi|254780226|r 4 KCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGASK 83 (367)
Q Consensus 4 kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA~~ 83 (367)
T Consensus 5 tvLllGl~~sGKT~Lf~~L~~~~~~~----T~tS~~~n~~~~~~~~----------~~-----~~~~lvD~PGh~k---- 61 (181)
T pfam09439 5 AVIIAGLCDSGKTSLFTLLTTGSVRK----TVTSQEPSAAYKYMNN----------KG-----NSLTLIDFPGHVK---- 61 (181)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCC----EECCCCCCCEEEEECC----------CC-----CEEEEEECCCCHH----
T ss_conf 69998689998999999997599487----5888678640687516----------89-----6689998899689----
Q ss_pred CCCCHHHHHH---HHHCCCEEEEEECCCC
Q ss_conf 4663289999---8730374788501234
Q gi|254780226|r 84 GEGLGNQFLA---HIREVDAIIHVLRCFK 109 (367)
Q Consensus 84 G~GlGN~FL~---~ir~aDalihVVdaf~ 109 (367)
T Consensus 62 ---lR~~~~~~~~~~~~~~gIVfVVDS~~ 87 (181)
T pfam09439 62 ---LRYKLLETLKDSSSLRGLVFVVDSTA 87 (181)
T ss_pred ---HHHHHHHHHHHHCCCEEEEEEEECCC
T ss_conf ---99999986430026449999997866