HHsearch alignment for GI: 254780226 and conserved domain: smart00173
>smart00173 RAS Ras subfamily of RAS small GTPases. Similar in fold and function to the bacterial EF-Tu GTPase. p21Ras couples receptor Tyr kinases and G protein receptors to protein kinase cascades
Probab=98.10 E-value=5.5e-05 Score=53.38 Aligned_cols=148 Identities=19% Similarity=0.242 Sum_probs=83.3
Q ss_pred CEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCC
Q ss_conf 24867528887888999987404898736668674488337997685558777642186502335799985122354322
Q gi|254780226|r 3 FKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGAS 82 (367)
Q Consensus 3 ~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA~ 82 (367)
T Consensus 1 fKiv~vGd~~vGKTsli~r~~~~-~-f~~~y~-~Ti----~~~~~k~------i-~~~~~---~~~l~iwDt~G~e~--- 60 (164)
T smart00173 1 YKLVVLGSGGVGKSALTIQFVQG-H-FVDDYD-PTI----EDSYRKQ------I-EIDGE---VCLLDILDTAGQEE--- 60 (164)
T ss_pred CEEEEECCCCCCHHHHHHHHHHC-C-CCCCCC-CCE----EEEEEEE------E-EECCE---EEEEEEEECCCCCC---
T ss_conf 98999999997899999999729-7-998778-813----6789999------9-99999---99999998999710---
Q ss_pred CCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 24663289999873037478850123454211345776732157889888876433222457777787520320467778
Q gi|254780226|r 83 KGEGLGNQFLAHIREVDAIIHVLRCFKDENIIHVEGRIDPINDIETIETELMLSDLERLERLFEKNKKYRNHKSEEIVLL 162 (367)
Q Consensus 83 ~G~GlGN~FL~~ir~aDalihVVdaf~~~~v~~~~g~~DP~~Di~~i~~EL~l~dle~lek~~~k~~k~~~~~~~~~~~~ 162 (367)
T Consensus 61 -~~~~~~---~~~~~a~~~ilvydi~~~~S-------------f~------------~~~-~~----------------- 93 (164)
T smart00173 61 -FSAMRD---QYMRTGEGFLLVYSITDRQS-------------FE------------EIK-KF----------------- 93 (164)
T ss_pred -HHHHHH---HHCCCCCEEEEEEECCCHHH-------------HH------------HHH-HH-----------------
T ss_conf -356777---75379877999830798899-------------99------------999-99-----------------
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCHHEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99999889988758741034431326777621023576410100100343011101013467877886436984033210
Q gi|254780226|r 163 QSIISSSLRLIEEGKPVRSLLESLDSDAIPIFKSLNLLTAKPILYICNVSEHDCKKGNIYTEAVQRLASQQNAEMIIISA 242 (367)
Q Consensus 163 ~~~l~~~~~~Le~~~~~r~~~~~~~~de~~~l~~~~llt~KP~iivaNk~e~~~~~~n~~~e~i~~l~~~~~~~~i~isa 242 (367)
T Consensus 94 -----------------------~~-~i~~-~~~---~~~~piilvgnK~DL~~~-r~V~~~e~~~~a~~~~~~~~E~SA 144 (164)
T smart00173 94 -----------------------RE-QILR-VKD---RDDVPIVLVGNKCDLESE-RVVSTEEGKELARQWGCPFLETSA 144 (164)
T ss_pred -----------------------HH-HHHH-HCC---CCCCCEEEEEECCCCHHC-CCCCHHHHHHHHHHCCCEEEEECC
T ss_conf -----------------------99-9998-618---888866877753463011-789999999999983998999858
Q ss_pred HHHH
Q ss_conf 0246
Q gi|254780226|r 243 AIEA 246 (367)
Q Consensus 243 ~~E~ 246 (367)
T Consensus 145 k~g~ 148 (164)
T smart00173 145 KERV 148 (164)
T ss_pred CCCC
T ss_conf 9881