HHsearch alignment for GI: 254780226 and conserved domain: smart00178
>smart00178 SAR Sar1p-like members of the Ras-family of small GTPases. Yeast SAR1 is an essential gene required for transport of secretory proteins from the endoplasmic reticulum to the Golgi apparatus.
Probab=98.73 E-value=1.2e-07 Score=71.35 Aligned_cols=80 Identities=26% Similarity=0.417 Sum_probs=57.1
Q ss_pred CCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCC
Q ss_conf 82486752888788899998740489873666867448833799768555877764218650233579998512235432
Q gi|254780226|r 2 GFKCGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDLVPTRMSFVDIAGLVRGA 81 (367)
Q Consensus 2 ~~kiGlvG~pn~GKST~f~alT~~~~~~~~~ypFtTi~pn~g~~~v~d~~~~~l~~~~~~~~~~p~~i~~iDvaGLv~gA 81 (367)
T Consensus 17 e~~ililGLd~aGKTTil~~lk~-~~--~~-~~~PT~g~~~e~~~~~~-----------------~~~~~wDlgG----~ 71 (184)
T smart00178 17 HAKILFLGLDNAGKTTLLHMLKN-DR--LA-QHQPTQHPTSEELAIGN-----------------IKFTTFDLGG----H 71 (184)
T ss_pred CCEEEEECCCCCCHHHHHHHHHC-CC--CC-CCCCCCCCCEEEEEECC-----------------EEEEEEECCC----C
T ss_conf 14799996588988999999806-99--75-30578788648999999-----------------9999998898----7
Q ss_pred CCCCCCHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 2246632899998730374788501234
Q gi|254780226|r 82 SKGEGLGNQFLAHIREVDAIIHVLRCFK 109 (367)
Q Consensus 82 ~~G~GlGN~FL~~ir~aDalihVVdaf~ 109 (367)
T Consensus 72 ~~~R~lW~~Y---y~~~~~iIfVVDssD 96 (184)
T smart00178 72 QQARRLWKDY---FPEVNGIVYLVDAYD 96 (184)
T ss_pred HHHHHHHHHH---HCCCCEEEEEEECCC
T ss_conf 7788999988---216758999972686