>gnl|CDD|133300 cd01900, YchF, YchF subfamily. YchF is a member of the Obg family, which includes four other subfamilies of GTPases: Obg, DRG, Ygr210, and NOG1. Obg is an essential gene that is involved in DNA replication in C. crescentus and Streptomyces griseus and is associated with the ribosome. Several members of the family, including YchF, possess the TGS domain related to the RNA-binding proteins. Experimental data and genomic analysis suggest that YchF may be part of a nucleoprotein complex and may function as a GTP-dependent translational factor. Length = 274

Score = 412 bits (1061), Expect = e-115 Identities = 165/281 (58%), Positives = 207/281 (73%), Gaps = 11/281 (3%) Query: 5 CGIIGLPNVGKSTLFNALTRTASAQAANYPFCTIEPNSGEVAVPDPRMHKLAEIAESKDL 64 GI+GLPNVGKSTLFNALT+ A A+AANYPFCTIEPN G V VPD R+ KLAEI + K + Sbjct: 1 IGIVGLPNVGKSTLFNALTK-AGAEAANYPFCTIEPNVGIVPVPDERLDKLAEIVKPKKI 59 Query: 65 VPTRMSFVDIAGLVRGASKGEGLGNQFLAHIREVDAIIHVLRCFKDENIIHVEGRIDPIN 124 VP + FVDIAGLV+GASKGEGLGN+FL+HIREVDAI HV+RCF+D++I HVEG +DP+ Sbjct: 60 VPATIEFVDIAGLVKGASKGEGLGNKFLSHIREVDAIAHVVRCFEDDDITHVEGSVDPVR 119 Query: 125 DIETIETELMLSDLERLERLFEK-NKKYRNHKSE---EIVLLQSIISSSLRLIEEGKPVR 180 DIE I TEL+L+DLE +E+ E+ KK ++ E E+ LL+ I +EEGKP R Sbjct: 120 DIEIINTELILADLETVEKRLERLEKKAKSGDKEAKAELELLEKIKE----HLEEGKPAR 175 Query: 181 SLLESLDSDAIPIFKSLNLLTAKPILYICNVSEHDCKKGNIYTEAVQRLASQQNAEMIII 240 SL L + I I SL LLTAKP+LY+ NVSE D GN V+ +A+++ AE+I I Sbjct: 176 SL--ELTEEEIEILNSLQLLTAKPVLYVANVSEDDLANGNNKVLKVREIAAKEGAEVIPI 233 Query: 241 SAAIEAEISQLPEEERALFMEELDISISGLELLIRSGYRLL 281 SA IEAE+++L EEE A F+EEL + SGL+ LIR+GY LL Sbjct: 234 SAKIEAELAELDEEEAAEFLEELGLEESGLDRLIRAGYELL 274

RPSBLAST alignment for GI: 254780226 and conserved domain: cd01900