RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|254780227|ref|YP_003064640.1| pyrophosphate--fructose-6-phosphate 1-phosphotransferase [Candidatus Liberibacter asiaticus str. psy62] (426 letters) >gnl|CDD|30554 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate transport and metabolism]. Length = 347 Score = 159 bits (404), Expect = 1e-39 Identities = 94/358 (26%), Positives = 145/358 (40%), Gaps = 71/358 (19%) Query: 31 KVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNA 90 K+A LT+GG AP ++++I ++ K E+ GY GLL D I R++ Sbjct: 4 KIAILTSGGDAPGMNAVIRAVVRTAIKE--GLEVFGIYNGYLGLLEGD---IKPLTREDV 58 Query: 91 EQLLSYGGSPIGNSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDDT 150 + L++ GG+ +G++R + K A +L + G+ L IGGD + Sbjct: 59 DDLINRGGTFLGSARFPEFKTEEGRKVA------------AENLKKLGIDALVVIGGDGS 106 Query: 151 NTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAAQVSACFFDNISNERSA 210 T A L I VVG+PKTIDNDI ++G TA + + DN+ + S+ Sbjct: 107 YTGAALLAEEGG-----IPVVGVPKTIDNDISGTDFTIGFDTALETAVEAIDNLRDTASS 161 Query: 211 TPRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDRNYIDGFIFSPDFKGIDGVYLPEMSFNL 270 R + I EVMGR+ GWL + G D + +PE +L Sbjct: 162 HER-IFIVEVMGRHAGWLALAAGLAT--------------------GADIILIPEEPADL 200 Query: 271 EVE-----IERLSKVMEKKGSVAIFVSEGACRDVIMDNRLSSGEKIKRDSFGHILLDKMN 325 +E I+ + KK ++ I V+EGA D I +N I+ Sbjct: 201 IIEELIAEIKAKREARGKKHAI-IVVAEGAI-DQIGENGAELLAAIEE------------ 246 Query: 326 VGSWFADKFANMIKAERSIVQKSGYFARSAPSGSEDLSLIKKMVVLAVDSAISGISGV 383 A R V G+ R + D L ++ AVD + G +G Sbjct: 247 -------LLALGDFETRVTVL--GHIQRGGTPSAFDRVLASRLGAAAVDLLLEGKTGY 295 >gnl|CDD|29437 cd00363, PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.. Length = 338 Score = 105 bits (264), Expect = 2e-23 Identities = 71/287 (24%), Positives = 123/287 (42%), Gaps = 45/287 (15%) Query: 31 KVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNA 90 K+ LT+GG AP +++ I ++ + I E+ GY GL+ D + + + Sbjct: 2 KIGVLTSGGDAPGMNAAIRGVVR--SAIAEGLEVYGIYEGYAGLVEGDIKELDWESVSD- 58 Query: 91 EQLLSYGGSPIGNSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDDT 150 +++ GG+ IG++R K + E +A +L + G+ L IGGD + Sbjct: 59 --IINRGGTIIGSARCK------------EFRTEEGRAKAAENLKKHGIDALVVIGGDGS 104 Query: 151 NTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAAQVSACFFDNISNERSA 210 T A L K V+GLP TIDNDI ++G TA + D I + S+ Sbjct: 105 YTGADLLTEEWPSKYQGFNVIGLPGTIDNDIKGTDYTIGFDTALKTIVEAIDRIRDTASS 164 Query: 211 TPRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDRNYIDGFIFSPDFKGIDGVYLPEMSFNL 270 R+ ++ EVMGR+CG + + + G D +++PE Sbjct: 165 HQRTFVV-EVMGRHCGDIALEAG------------LAT--------GADIIFIPEEPAAD 203 Query: 271 EVE---IERLSKVMEK-KGSVAIFVSEGACRDVIMDNRLSSGEKIKR 313 E E ++ + K E+ K + V+EGA + + + + + Sbjct: 204 EWEEEMVDVIKKRRERGKRHGIVIVAEGAIDF---IPKPITEKLLAK 247 >gnl|CDD|109425 pfam00365, PFK, Phosphofructokinase. Length = 279 Score = 92.0 bits (229), Expect = 2e-19 Identities = 74/272 (27%), Positives = 117/272 (43%), Gaps = 48/272 (17%) Query: 31 KVAFLTAGGIAPCLSSIIGMLIN--HYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQ 88 K+ LT+GG AP +++ I ++ E+ GY GL+ + I + + Sbjct: 2 KIGVLTSGGDAPGMNAAIRAVVRSAIAEG----LEVYGIYEGYAGLVAGN---IKQLDWE 54 Query: 89 NAEQLLSYGGSPIGNSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGD 148 + ++ GG+ IG++R F ++ +A +L + G+ L IGGD Sbjct: 55 SVSDIIQRGGTFIGSARCP--EF----------REREGRLKAAENLKKHGIDALVVIGGD 102 Query: 149 DTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAAQVSACFFDNISNER 208 + T A DLL + VGLP TIDNDI ++G TA D I + Sbjct: 103 GSYTGA-DLLT----SEHGFNCVGLPGTIDNDICGTDYTIGFDTALNTIVEAIDRIRDTA 157 Query: 209 SATPRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDRNYIDGFIFSPDFKGIDGVYLPEMSF 268 S+ R+ ++ EVMGR+CG L + I G G D +++PE F Sbjct: 158 SSHQRTFVV-EVMGRHCGDLALVAG------------IAG--------GADYIFIPEAPF 196 Query: 269 NLEVEIERLSKVMEK-KGSVAIFVSEGACRDV 299 E RL + E+ K + V+EGA + Sbjct: 197 WEEELCNRLKRGRERGKRHNIVIVAEGAIDPI 228 >gnl|CDD|29438 cd00763, Bacterial_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.. Length = 317 Score = 81.1 bits (200), Expect = 6e-16 Identities = 70/269 (26%), Positives = 114/269 (42%), Gaps = 49/269 (18%) Query: 31 KVAFLTAGGIAPCLSSIIGMLIN--HYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQ 88 ++ LT+GG AP +++ I ++ + E+ R GY GL+ D + + R Sbjct: 2 RIGVLTSGGDAPGMNAAIRGVVRSAIAEGL----EVYGIRDGYAGLIAGDIVPLD---RY 54 Query: 89 NAEQLLSYGGSPIGNSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGD 148 + +++ GG+ +G++R F KDE + L + G+ L IGGD Sbjct: 55 SVSDIINRGGTFLGSAR--FPEF----------KDEEGQAKAIEQLKKHGIDALVVIGGD 102 Query: 149 DTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAAQVSACFFDNISNER 208 + A L E + VGLP TIDNDI ++G TA D I + Sbjct: 103 GSYMGA----MRLTEHGFP--CVGLPGTIDNDIPGTDYTIGFDTALNTVVEAIDRIRDTS 156 Query: 209 SATPRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDRNYIDGFIFSPDFKGIDGVYLPEMSF 268 S+ R ++ EVMGR+CG + + I G G + + +PE F Sbjct: 157 SSHQRISVV-EVMGRHCGDIALAAG------------IAG--------GAEFIVIPEAEF 195 Query: 269 NLEVEIERLSKVMEK-KGSVAIFVSEGAC 296 + E R+ +E+ K + V+EG Sbjct: 196 DREEVANRIKAGIERGKKHAIVVVAEGVY 224 >gnl|CDD|29440 cd00765, Pyrophosphate_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include pyrophosphate-dependent phosphofructokinases. These are found in bacteria as well as plants. These may be dimeric nonallosteric enzymes as in bacteria or allosteric heterotetramers as in plants.. Length = 550 Score = 71.2 bits (174), Expect = 5e-13 Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 21/197 (10%) Query: 31 KVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNA 90 K+ + +GG AP ++I L ++ + + L ++ G G+L D I + + Q Sbjct: 74 KIGIVLSGGQAPGGHNVISGLFDYLKERAKGSTLYGFKGGPAGILKCDYIELNAEYIQPY 133 Query: 91 EQLLSYGGSPIGNSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDDT 150 + G I + R K+ D K+ + L+ L IGGDD+ Sbjct: 134 RN--TGGFDMICSGRTKIET-EDQFKQAEETAKKLDLDA------------LVVIGGDDS 178 Query: 151 NTTACDLLRYLKEKNYNITVVGLPKTIDNDI----IPIHQSLGALTAAQVSACFFDNISN 206 NT A L + K V+G+PKTID D+ I S G TA ++ + N+ Sbjct: 179 NTNAALLAENFRSKGLKTRVIGVPKTIDGDLKNKEIET--SFGFDTATKIYSELIGNVMR 236 Query: 207 ERSATPRSLIIHEVMGR 223 + +T + ++MGR Sbjct: 237 DARSTGKYWHFVKLMGR 253 >gnl|CDD|29439 cd00764, Eukaryotic_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.. Length = 762 Score = 68.5 bits (167), Expect = 3e-12 Identities = 74/303 (24%), Positives = 129/303 (42%), Gaps = 60/303 (19%) Query: 31 KVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNA 90 +A LT+GG A +++ + ++ I A++ + GY+GL+ I + ++ Sbjct: 5 AIAVLTSGGDAQGMNAAVRAVVR--MGIYVGAKVFFVYEGYEGLV-KGGDYIKQAEWESV 61 Query: 91 EQLLSYGGSPIGNSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDDT 150 L GG+ IG++R K F + + G ++ +A++L+Q G+T L IGGD + Sbjct: 62 SNWLQEGGTIIGSARCK--EFRE--REGRLQ--------AAYNLIQRGITNLCVIGGDGS 109 Query: 151 NTTA-------CDLLRYLKE----------KNYNITVVGLPKTIDNDIIPIHQSLGALTA 193 T A LL L + K ++ +VG+ +IDND ++G +A Sbjct: 110 LTGADLFRSEWPSLLEELVKDGKITEEEVAKYQHLNIVGMVGSIDNDFCGTDMTIGTDSA 169 Query: 194 AQVSACFFDNISNERSATPRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDRNYIDGFIFSP 253 D I+ + R+ ++ EVMGR+CG+L S Sbjct: 170 LHRICEVVDAITTTAQSHQRTFVL-EVMGRHCGYLALVSGLA------------------ 210 Query: 254 DFKGIDGVYLPEMSFNLEVE---IERLSKVMEKKGSVAI-FVSEGACRDVIMDNRLSSGE 309 G D +++PE E RLS+ + + I V+EGA D + + E Sbjct: 211 --TGADWIFIPERPPEDGWEDQMCRRLSEHRSRGKRLNIIIVAEGAIDD---QLKPITSE 265 Query: 310 KIK 312 +K Sbjct: 266 DVK 268 Score = 52.3 bits (125), Expect = 2e-07 Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 39/193 (20%) Query: 94 LSYGGSPIGNSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDDTNTT 153 GGS +G KR L KKD LE A++ + G+ L +GG + Sbjct: 449 TGRGGSELGT------------KRTLPKKD---LETIAYNFQKYGIDGLIIVGGFEAYKG 493 Query: 154 ACDLLRYLKE-KNYNITVVGLPKTIDNDIIPIHQSLGALTAAQVSACFFDNISNERSATP 212 L ++ + + I +V +P T+ N++ SLG+ TA + D I S T Sbjct: 494 LLQLREAREQYEEFCIPMVLIPATVSNNVPGTDFSLGSDTALNALMKYCDRIKQSASGTK 553 Query: 213 RSLIIHEVMGRNCGWLTAYSAHCYLNMIQDRNYIDGFIFSPDFKGIDGVYLPEMSFNLE- 271 R + I E MG CG+L + G D Y+ E FN+ Sbjct: 554 RRVFIVETMGGYCGYLATMTGLA--------------------VGADAAYVFEEPFNIRD 593 Query: 272 --VEIERLSKVME 282 +E L++ M+ Sbjct: 594 LQENVEHLTEKMK 606 >gnl|CDD|37651 KOG2440, KOG2440, KOG2440, Pyrophosphate-dependent phosphofructo-1-kinase [Carbohydrate transport and metabolism]. Length = 666 Score = 53.4 bits (128), Expect = 1e-07 Identities = 65/279 (23%), Positives = 110/279 (39%), Gaps = 57/279 (20%) Query: 35 LTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQNAEQLL 94 LT+GG + +++ + ++ K LIY GY+GL+ +I E +L Sbjct: 2 LTSGGDSQGMNAAVRAVVRMGIYRGCKVYLIYE--GYEGLV-RGGDSIKEAQWLRVSYIL 58 Query: 95 SYGGSPIGNSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDDTNTTA 154 S GG+ IG +R K + A +L+ G+ L IGGD + T A Sbjct: 59 SLGGTLIGTARCKAFRGREGRLAA------------ADNLIARGIPNLVVIGGDGSLTGA 106 Query: 155 CDLLR----YLKE--------------KNYNITVVGLPKTIDNDIIPIHQSLGALTAAQV 196 YL+E ++ +VG+ +IDND+ ++G +A Sbjct: 107 -RAFPREWIYLEEELVKAGIVTCGGLCPGGHLVIVGIVGSIDNDMYGTDMTIGIDSALHR 165 Query: 197 SACFFDNISNERSATPRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDRNYIDGFIFSPDFK 256 A D I++ + R + EVMGR+CG+L + I Sbjct: 166 EA--IDAITSTAQSHSRGFVA-EVMGRHCGYLA------LVAAIA--------------G 202 Query: 257 GIDGVYLPEMSFNLEVEIERLSKVMEKKGSVAIFVSEGA 295 G D +++PE ++ + + K+G + V GA Sbjct: 203 GADTIFIPERPGEDPEQLCEILDSIRKRGLNIVIVIGGA 241 Score = 51.1 bits (122), Expect = 7e-07 Identities = 45/219 (20%), Positives = 84/219 (38%), Gaps = 27/219 (12%) Query: 129 VSAHHLMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDI--IPIHQ 186 + + G+ I+ IGG NT A + +KE+ + VVG+PKTI D+ + Sbjct: 224 LDSIRKR--GLNIVIVIGGAIDNTGAPIIAEEVKERKLKVLVVGVPKTILGDVQRGGVPS 281 Query: 187 SLGALTAAQVSACFFDNISNERSATPRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDRNYI 246 + +TA ++ + E + I +MGR +T + +D+++ Sbjct: 282 AFDRITACEMGQEAINAALEEAESAENGNGIVRLMGRESVHITLEAT----LASRDKDFC 337 Query: 247 DG--------FIFSPDFKGIDGVYLPE--MSFNLE-----VEIERLSKVMEKKGSVAIFV 291 + +K +D V F E + + G + Sbjct: 338 LAPELRGRKFTLNLNTYKILDVVDPRAEQDPFYGEIPGAIGLFGAPAAGLNAAGHSVLRY 397 Query: 292 SEGACRDVIMDNRLSSGEKIKRDSFGHILLDKMNVGSWF 330 +EGA +DVI + G + +D+ G ++ +VG W Sbjct: 398 AEGAGQDVIAISNGFEG--LAKDALGELIW--KDVGLWL 432 Score = 36.1 bits (83), Expect = 0.019 Identities = 32/135 (23%), Positives = 47/135 (34%), Gaps = 24/135 (17%) Query: 165 NYNITVVGLPKTIDNDIIPIHQSLGALTAAQVSACFFDNISNERSATPRSLIIHEVMGRN 224 ++I +V +P T N++ SLG TA A D+ T R + + E MG Sbjct: 490 GFDIPMVNIPATYSNNVPGTEFSLGVDTALNAWARVCDSTKQSAFGTKRRVFVVETMGGY 549 Query: 225 CGWLTAYSAHCYLNMIQDRNYIDGFIFSPDFKGIDGVYLPEMSFN---LEVEIERL-SKV 280 G+L + G D Y+PE F+ L E L K+ Sbjct: 550 SGYLA--------------------TMTGLAPGADAAYVPEEGFSIKDLRENAEHLAEKM 589 Query: 281 MEKKGSVAIFVSEGA 295 +EGA Sbjct: 590 RYGNPRGLQLRNEGA 604 >gnl|CDD|30381 COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism]. Length = 300 Score = 33.2 bits (76), Expect = 0.14 Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 31/119 (26%) Query: 79 KITITEDMRQNAEQLL-SYGGSPIGNSRVKLTNFSDCIKRGLIKKD-------------- 123 I + E M Q +LL + G V LT + +G I++ Sbjct: 89 IIVMPETMSQERRKLLRALGA------EVILTPGAPGNMKGAIERAKELAAEIPGYAVWL 142 Query: 124 ---ENPLEVSAHH-------LMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVG 172 ENP AH+ Q+ + + G T T + RYLKE+N N+ +V Sbjct: 143 NQFENPANPEAHYETTGPEIWQQTDGKVDAFVAGVGTGGTITGVARYLKERNPNVRIVA 201 >gnl|CDD|33760 COG3980, spsG, Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]. Length = 318 Score = 29.5 bits (66), Expect = 1.7 Identities = 12/31 (38%), Positives = 18/31 (58%) Query: 141 ILHTIGGDDTNTTACDLLRYLKEKNYNITVV 171 IL T+GG D +L L++KN N+ +V Sbjct: 161 ILITLGGSDPKNLTLKVLAELEQKNVNLHIV 191 >gnl|CDD|107204 cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.. Length = 291 Score = 28.2 bits (64), Expect = 3.9 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 7/56 (12%) Query: 124 ENPLEVSAHH-------LMQSGVTILHTIGGDDTNTTACDLLRYLKEKNYNITVVG 172 ENP AH+ Q + + G T T + RYLKEKN N+ +VG Sbjct: 137 ENPANPEAHYETTAPEIWEQLDGKVDAFVAGVGTGGTITGVARYLKEKNPNVRIVG 192 >gnl|CDD|147763 pfam05788, Orbi_VP1, Orbivirus RNA-dependent RNA polymerase (VP1). This family consists of the RNA-dependent RNA polymerase protein VP1 from the Orbiviruses. VP1 may have both enzymatic and structural roles in the virus life cycle. Length = 1301 Score = 27.4 bits (61), Expect = 7.7 Identities = 8/27 (29%), Positives = 13/27 (48%) Query: 139 VTILHTIGGDDTNTTACDLLRYLKEKN 165 V +L + GGDD N+ + + N Sbjct: 274 VIVLTSGGGDDRNSKEVFYTGFRRIPN 300 >gnl|CDD|36850 KOG1637, KOG1637, KOG1637, Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]. Length = 560 Score = 27.2 bits (60), Expect = 10.0 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%) Query: 371 LAVDSAISGISGVTGEDER--ENNILRIIKFEDIRGGRVF 408 LA D+ I+ ++GV + +R E + L ++KF+D G VF Sbjct: 30 LADDAVIAKVNGVLWDLDRPLEGDCLELLKFDDDEGKDVF 69 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.321 0.138 0.402 Gapped Lambda K H 0.267 0.0657 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 5,095,160 Number of extensions: 271216 Number of successful extensions: 619 Number of sequences better than 10.0: 1 Number of HSP's gapped: 603 Number of HSP's successfully gapped: 21 Length of query: 426 Length of database: 6,263,737 Length adjustment: 96 Effective length of query: 330 Effective length of database: 4,189,273 Effective search space: 1382460090 Effective search space used: 1382460090 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 59 (26.7 bits)