RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780227|ref|YP_003064640.1| pyrophosphate--fructose-6-phosphate 1-phosphotransferase [Candidatus Liberibacter asiaticus str. psy62] (426 letters) >3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A (A:1-148,A:302-364) Length = 211 Score = 115 bits (290), Expect = 9e-27 Identities = 34/160 (21%), Positives = 58/160 (36%), Gaps = 10/160 (6%) Query: 27 MVAHKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIY-YRFGYQGLLLDDKITITED 85 M A + +GG+ +++ +I K K IY R G G L +D I ++ Sbjct: 1 MAAKNAFYAQSGGVTAVINASAAGVIEAARKQSGKIGRIYAGRNGIIGALTEDLIDTGQE 60 Query: 86 MRQNAEQLLSYGGSPIGNSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTI 145 L G+ R KL + ++++ E + Sbjct: 61 SDAAISALRYTPSGAFGSCRYKLKS---------LEQNRREYERLIEVFKAHDIGYFFYN 111 Query: 146 GGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDIIPIH 185 GG D+ T + + Y I + +PKT+DND+ H Sbjct: 112 GGGDSADTCLKVSQLSGTLGYPIQAIHVPKTVDNDLPARH 151 >2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* (A:28-234,A:388-429) Length = 249 Score = 106 bits (266), Expect = 6e-24 Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 17/159 (10%) Query: 23 LEKDMVAHKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITI 82 + + + +T GGI P L+ +I + + +I +RFGY GL T Sbjct: 64 IHFNPTETTIGIVTCGGICPGLNDVIRSITLTGINVYNVKRVIGFRFGYWGLSKKGSQTA 123 Query: 83 TEDMRQNAEQLLSYGGSPIGNSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTIL 142 E R + YGG+ +G+SR + L + GV IL Sbjct: 124 IELHRGRVTNIHHYGGTILGSSR-----------------GPQDPKEMVDTLERLGVNIL 166 Query: 143 HTIGGDDTNTTACDLLRYLKEKNYNITVVGLPKTIDNDI 181 T+GGD T A + + K + +I+V G+PKTIDND+ Sbjct: 167 FTVGGDGTQRGALVISQEAKRRGVDISVFGVPKTIDNDL 205 >2f48_A Diphosphate--fructose-6-phosphate 1- phosphotransferase; HET: FBP; 2.11A {Borrelia burgdorferi B31} (A:1-211,A:433-504) Length = 283 Score = 102 bits (255), Expect = 1e-22 Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 15/153 (9%) Query: 29 AHKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQ 88 A + + +GG AP ++I + + K P ++L ++ G GLL +DKI +TE + Sbjct: 72 ALNIGIILSGGPAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLENDKIELTESLIN 131 Query: 89 NAEQLLSYGGSPIGNSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGD 148 + + GG I +S + E + ++ + + IGGD Sbjct: 132 S---YRNTGGFDIVSSGRTKI------------ETEEHYNKALFVAKENNLNAIIIIGGD 176 Query: 149 DTNTTACDLLRYLKEKNYNITVVGLPKTIDNDI 181 D+NT A L Y K+ NI V+G+PKTID D+ Sbjct: 177 DSNTNAAILAEYFKKNGENIQVIGVPKTIDADL 209 >1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} (A:1-132,A:254-306) Length = 185 Score = 89.5 bits (222), Expect = 7e-19 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 23/152 (15%) Query: 30 HKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQN 89 K+ LT+GG AP +++ I ++ + + E++ GY GL D + + R + Sbjct: 3 KKIGVLTSGGDAPGMNAAIRGVV--RSALTEGLEVMGIYDGYLGLYEDRMVQLD---RYS 57 Query: 90 AEQLLSYGGSPIGNSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDD 149 +++ GG+ +G++R +DEN V+ +L + G+ L IGGD Sbjct: 58 VSDMINRGGTFLGSARFPE------------FRDENIRAVAIENLKKRGIDALVVIGGDG 105 Query: 150 TNTTACDLLRYLKEKNYNITVVGLPKTIDNDI 181 + A L +GLP TIDNDI Sbjct: 106 SYMGAMRL------TEMGFPCIGLPGTIDNDI 131 >3pfk_A Phosphofructokinase; transferase(phosphotransferase); 2.40A {Bacillus stearothermophilus} (A:1-131,A:251-305) Length = 186 Score = 89.5 bits (222), Expect = 8e-19 Identities = 35/152 (23%), Positives = 60/152 (39%), Gaps = 23/152 (15%) Query: 30 HKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQN 89 ++ LT+GG +P +++ I ++ I E+ GY GL+ + + + Sbjct: 2 KRIGVLTSGGDSPGMNAAIRSVVRK--AIYHGVEVYGVYHGYAGLIAGNIKKLE---VGD 56 Query: 90 AEQLLSYGGSPIGNSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDD 149 ++ GG+ + +R K E + L + G+ L IGGD Sbjct: 57 VGDIIHRGGTILYTARCPE------------FKTEEGQKKGIEQLKKHGIQGLVVIGGDG 104 Query: 150 TNTTACDLLRYLKEKNYNITVVGLPKTIDNDI 181 + A L + VG+P TIDNDI Sbjct: 105 SYQGAKKL------TEHGFPCVGVPGTIDNDI 130 >1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus bulgaricus, transferase; 1.85A {Lactobacillus delbrueckii subsp} (A:1-131,A:253-303) Length = 182 Score = 89.1 bits (221), Expect = 1e-18 Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 23/152 (15%) Query: 30 HKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELIYYRFGYQGLLLDDKITITEDMRQN 89 ++ LT+GG AP +++ + + I E+ R+G+ GL+ D + ++ Sbjct: 2 KRIGILTSGGDAPGMNAAVRAVT--RVAIANGLEVFGIRYGFAGLVAGDIFPLE---SED 56 Query: 90 AEQLLSYGGSPIGNSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQSGVTILHTIGGDD 149 L++ G+ + ++R +E L + G+ + IGGD Sbjct: 57 VAHLINVSGTFLYSARYPE------------FAEEEGQLAGIEQLKKHGIDAVVVIGGDG 104 Query: 150 TNTTACDLLRYLKEKNYNITVVGLPKTIDNDI 181 + A L + +GLP TIDNDI Sbjct: 105 SYHGALQL------TRHGFNSIGLPGTIDNDI 130 >2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* (A:235-387,A:441-487) Length = 200 Score = 88.6 bits (219), Expect = 1e-18 Identities = 32/180 (17%), Positives = 61/180 (33%), Gaps = 35/180 (19%) Query: 186 QSLGALTAAQVSACFFDNISNERSATPRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDRNY 245 ++ G TA + + E + + + ++MGR+ G++ A +A Sbjct: 3 RTFGFQTAVEKAVQAIRAAYAEAVSANYGVGVVKLMGRDSGFIAAQAAVA---------- 52 Query: 246 IDGFIFSPDFKGIDGVYLPEMSFNLEVEIERLSKVMEKKGSVAIFVSEGACRDVIMDNRL 305 + +PE + + + L + S I V+EG +D Sbjct: 53 ---------SAQANICLVPENPISEQEVMSLLERRFCHSRSCVIIVAEGFGQDWGR---- 99 Query: 306 SSGEKIKRDSFGHILLDKMNVGSWFADKFANMIKAERSIV----QKSG---YFARSAPSG 358 D+ G+ L ++G +K +KA +S K Y R+ P G Sbjct: 100 ---GSGGYDASGNKKLI--DIGVILTEKVKAFLKANKSRYPDSTVKYIDPSYMIRACPPG 154 >3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A (A:149-301) Length = 153 Score = 76.2 bits (187), Expect = 8e-15 Identities = 37/172 (21%), Positives = 67/172 (38%), Gaps = 27/172 (15%) Query: 187 SLGALTAAQVSACFFDNISNERSAT---PRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDR 243 G + A+ A S + ++ + + EVMGR+ GW+ A Sbjct: 5 CPGFGSVAKYIAVSTLEASFDVASMSATSTKVFVLEVMGRHAGWIAAAG----------- 53 Query: 244 NYIDGFIFSPDFKGIDGVYLPEMSFNLEVEIERLSKVMEKKGSVAIFVSEGACRDVIMDN 303 G SP+ + + PE+SF+ + + ++ ++K G ++ VSEG D+ Sbjct: 54 ----GLASSPEREIPVVILFPEISFDKQKFLAKVDSCVKKFGYCSVVVSEGV----KGDD 105 Query: 304 RLSSGEKIKRDSFGHILLDKMNVGSWFADKFANMIKAE-RSIVQKSGYFARS 354 ++ RD+FGH L V A + + V + Y R+ Sbjct: 106 GKFLSDQGVRDAFGHAQLG--GVAPVVASMVKEGLGLKYHWGV--ADYLQRA 153 >2f48_A Diphosphate--fructose-6-phosphate 1- phosphotransferase; HET: FBP; 2.11A {Borrelia burgdorferi B31} (A:212-315,A:388-432,A:505-555) Length = 200 Score = 75.3 bits (185), Expect = 1e-14 Identities = 15/122 (12%), Positives = 33/122 (27%), Gaps = 29/122 (23%) Query: 184 IHQSLGALTAAQVSACFFDNISNERSATPRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDR 243 I S G +A ++ + N+ + +T + ++MGR+ + A Sbjct: 3 IEISFGFDSATKIYSELIGNLCRDAMSTKKYWHFVKLMGRSASHVALECALK-------- 54 Query: 244 NYIDGFIFSPDFKGIDGVYLPEMSFNLEVEIERLSKVM---------EKKGSVAIFVSEG 294 + + E + + + M + V EG Sbjct: 55 ------------THPNICIVSEEVLAKKKTLSEIIDEMVSVILKRSLNGDNFGVVIVPEG 102 Query: 295 AC 296 Sbjct: 103 LI 104 >3pfk_A Phosphofructokinase; transferase(phosphotransferase); 2.40A {Bacillus stearothermophilus} (A:132-250,A:306-319) Length = 133 Score = 74.9 bits (184), Expect = 2e-14 Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 24/141 (17%) Query: 187 SLGALTAAQVSACFFDNISNERSATPRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDRNYI 246 ++G TA D I + ++ R+ +I EVMGR+ G + +S Sbjct: 5 TIGFDTALNTVIDAIDKIRDTATSHERTYVI-EVMGRHAGDIALWSGLA----------- 52 Query: 247 DGFIFSPDFKGIDGVYLPEMSFNLEVEIERLSKVMEK-KGSVAIFVSEGACRDVIMDNRL 305 G + + +PE +++ I RL + E+ K I V+EG V ++ Sbjct: 53 ---------GGAETILIPEADYDMNDVIARLKRGHERGKKHSIIIVAEGVGSGVDFGRQI 103 Query: 306 S--SGEKIKRDSFGHILLDKM 324 +G + + GH++ +M Sbjct: 104 QEATGFETRVTVLGHVIDQRM 124 >1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} (A:133-253,A:307-320) Length = 135 Score = 74.1 bits (182), Expect = 3e-14 Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 24/136 (17%) Query: 187 SLGALTAAQVSACFFDNISNERSATPRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDRNYI 246 ++G TA D + + S+ R ++ EVMGR CG LT +A Sbjct: 5 TIGFFTALSTVVEAIDRLRDTSSSHQRISVV-EVMGRYCGDLTLAAAIA----------- 52 Query: 247 DGFIFSPDFKGIDGVYLPEMSFNLEVEIERLSKVMEK-KGSVAIFVSEGACRDVIMDNRL 305 G + V +PE+ F+ E + + + K K + ++E C + + + Sbjct: 53 ---------GGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAIVAITEHMCDVDELAHFI 103 Query: 306 S--SGEKIKRDSFGHI 319 +G + + GHI Sbjct: 104 EKETGRETRATVLGHI 119 >1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus bulgaricus, transferase; 1.85A {Lactobacillus delbrueckii subsp} (A:132-252) Length = 121 Score = 68.8 bits (168), Expect = 1e-12 Identities = 30/139 (21%), Positives = 49/139 (35%), Gaps = 24/139 (17%) Query: 184 IHQSLGALTAAQVSACFFDNISNERSATPRSLIIHEVMGRNCGWLTAYSAHCYLNMIQDR 243 ++G TA + D I + S+ R I+ VMGRNCG + Sbjct: 2 TDATIGYDTACMTAMDAIDKIRDTASSHHRVFIV-NVMGRNCGDIAMRVGVA-------- 52 Query: 244 NYIDGFIFSPDFKGIDGVYLPEMSFNLEVEIERLSKVMEK-KGSVAIFVSEGACRDVIMD 302 G D + +PE +++E RL + E K + V+EG Sbjct: 53 ------------CGADAIVIPERPYDVEEIANRLKQAQESGKDHGLVVVAEGVMTADQFM 100 Query: 303 NRLS--SGEKIKRDSFGHI 319 L ++ + GH+ Sbjct: 101 AELKKYGDFDVRANVLGHM 119 >2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2} (A:550-614) Length = 65 Score = 32.0 bits (72), Expect = 0.15 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 269 NLEVEIE 275 N+EV+IE Sbjct: 1 NVEVKIE 7 >2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2} (B:550-611) Length = 62 Score = 31.6 bits (71), Expect = 0.20 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 269 NLEVEIE 275 N+EV+IE Sbjct: 1 NVEVKIE 7 >2pff_B Fatty acid synthase subunit beta; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} (B:1772-1800,B:1916-2006) Length = 120 Score = 30.5 bits (69), Expect = 0.40 Identities = 7/37 (18%), Positives = 13/37 (35%), Gaps = 18/37 (48%) Query: 57 KILP---KAELIYYRFGYQGLLLDDKITITEDMRQNA 90 ++ E+++YR G+ M Q A Sbjct: 4 DVMSIESLVEVVFYR----GMT----------M-QVA 25 >1n8i_A Probable malate synthase G; glyoxylate pathway, acetyl coenzyme A, isocitrate lyase, persistence, GLCB, structural genomics, PSI; 2.10A {Mycobacterium tuberculosis} (A:580-741) Length = 162 Score = 29.1 bits (65), Expect = 0.96 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 6/58 (10%) Query: 81 TITEDMRQNAEQLLSYGGSPI--GNSRVKLTNFSDCIKRGLIKKDENPLEVSAHHLMQ 136 I E++ N + +L Y + G K+ + D L+ +D L +S+ L Sbjct: 14 EIREEVDNNCQSILGYVVRWVDQGVGCSKVPDIHDV---ALM-EDRATLRISSQLLAN 67 >3hl3_A Glucose-1-phosphate thymidylyltransferase; IDP01254, sucrose, structural genomics, center for structural genomics of infectious diseases; HET: SUC; 2.76A {Bacillus anthracis} (A:) Length = 269 Score = 29.1 bits (63), Expect = 1.2 Identities = 18/127 (14%), Positives = 34/127 (26%) Query: 173 LPKTIDNDIIPIHQSLGALTAAQVSACFFDNISNERSATPRSLIIHEVMGRNCGWLTAYS 232 ++ ++ I + F N +S+ E G Sbjct: 118 EDFVGNDRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQSVDDPERFGVANIQNRKII 177 Query: 233 AHCYLNMIQDRNYIDGFIFSPDFKGIDGVYLPEMSFNLEVEIERLSKVMEKKGSVAIFVS 292 +Y I+ D K + + S E+EI ++ K+G + Sbjct: 178 EIEEKPKEPKSSYAVTGIYLYDSKVFSYIKELKPSARGELEITDINNWYLKRGVLTYNEM 237 Query: 293 EGACRDV 299 G D Sbjct: 238 SGWWTDA 244 >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} (A:147-257) Length = 111 Score = 27.8 bits (61), Expect = 2.7 Identities = 12/86 (13%), Positives = 28/86 (32%), Gaps = 1/86 (1%) Query: 87 RQNAEQLLSYGGSPIGNSRVKLTNFSDCIKR-GLIKKDENPLEVSAHHLMQSGVTILHTI 145 R+ +E+LL +P G V+ + + + D H+ ++ + I Sbjct: 11 RRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYI 70 Query: 146 GGDDTNTTACDLLRYLKEKNYNITVV 171 + L+ Y + + Sbjct: 71 TSRTQFNSLQQLVAYYSKHADGLCHR 96 >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} (A:64-174) Length = 111 Score = 27.8 bits (61), Expect = 2.7 Identities = 12/86 (13%), Positives = 28/86 (32%), Gaps = 1/86 (1%) Query: 87 RQNAEQLLSYGGSPIGNSRVKLTNFSDCIKR-GLIKKDENPLEVSAHHLMQSGVTILHTI 145 R+ +E+LL +P G V+ + + + D H+ ++ + I Sbjct: 11 RRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYI 70 Query: 146 GGDDTNTTACDLLRYLKEKNYNITVV 171 + L+ Y + + Sbjct: 71 TSRTQFNSLQQLVAYYSKHADGLCHR 96 >1gef_A Holliday junction resolvase; HJC, hydrolase; 2.00A {Pyrococcus furiosus} (A:) Length = 123 Score = 27.1 bits (60), Expect = 3.9 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 7/73 (9%) Query: 340 AERSIVQK---SGYFA-RSAPSGSEDLSLIKKMVVLAVDSAISGISGVTGEDERENNILR 395 AER +++ G+ RSA S DL L ++ ++ + ++ R Sbjct: 8 AERELIKLLEKHGFAVVRSAGSKKVDLVAGNGKKYLCIEVKVTKKDHLYVGKR---DMGR 64 Query: 396 IIKFEDIRGGRVF 408 +I+F GG Sbjct: 65 LIEFSRRFGGIPV 77 >2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis} (A:1-113,A:263-319) Length = 170 Score = 27.0 bits (59), Expect = 5.5 Identities = 16/142 (11%), Positives = 42/142 (29%), Gaps = 19/142 (13%) Query: 11 LDMWILTGVLSFLEKDMVAHKVAFLTAGGIAPCLSSIIGMLINHYNKILPKAELI---YY 67 + +++ + + + + L+ G + + ++ K + +LI Sbjct: 44 IALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQV-TNVDPETKTIKVKDLITNEEK 102 Query: 68 RFGYQGLLLDDKITITEDMRQNAEQLLSYGGSPIGNSRVKLTNFSDCIKRGLIKKDENPL 127 Y L++ I E M + + + G D + N Sbjct: 103 TEAYDKLIMTTAIITDEYMHSSNRDIFAAG---------------DSAAVHYNPTNSNAY 147 Query: 128 EVSAHHLMQSGVTILHTIGGDD 149 A + ++ G + + D Sbjct: 148 IPLATNAVRQGRLVGLNLTEDK 169 >2is6_A DNA helicase II; hydrolase/DNA complex; HET: DNA ADP; 2.20A {Escherichia coli} PDB: 2is2_A* 2is1_A* 2is4_A* (A:1-106,A:189-283) Length = 201 Score = 26.3 bits (57), Expect = 7.9 Identities = 17/105 (16%), Positives = 30/105 (28%), Gaps = 14/105 (13%) Query: 87 RQNAEQLLSYGGSPIGNSRVKLTNFSDC---IKRGLIKKDENPLEVSAHHLMQSGVTILH 143 + ++ G+ G V T ++ + + L + AH L + IL Sbjct: 68 AEMRHRIGQLMGTSQGGMWVG-TFHGLAHRLLRAHHMDANFAELLLRAHELWLNKPHILQ 126 Query: 144 TIGGD----------DTNTTACDLLRYLKEKNYNITVVGLPKTID 178 DTN +R L + +VG Sbjct: 127 HYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSI 171 >2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus} (A:) Length = 189 Score = 26.2 bits (57), Expect = 8.7 Identities = 6/62 (9%), Positives = 17/62 (27%) Query: 154 ACDLLRYLKEKNYNITVVGLPKTIDNDIIPIHQSLGALTAAQVSACFFDNISNERSATPR 213 LL+ L+E ++++ +V + + + + Sbjct: 17 GIKLLQVLEELDFSVDLVISRNAKVVLKEEHSLTFEEVLKGLKNVRIHEENDFTSPLASG 76 Query: 214 SL 215 S Sbjct: 77 SR 78 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.321 0.138 0.402 Gapped Lambda K H 0.267 0.0634 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 3,191,160 Number of extensions: 142669 Number of successful extensions: 420 Number of sequences better than 10.0: 1 Number of HSP's gapped: 398 Number of HSP's successfully gapped: 26 Length of query: 426 Length of database: 4,956,049 Length adjustment: 91 Effective length of query: 335 Effective length of database: 1,879,794 Effective search space: 629730990 Effective search space used: 629730990 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 56 (25.5 bits)