HHsearch alignment for GI: 254780229 and conserved domain: COG0514

Probab=96.25  E-value=0.042  Score=36.83  Aligned_cols=84  Identities=24%  Similarity=0.406  Sum_probs=61.2

Q ss_pred             HHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH
Q ss_conf             89999985148955994287877038999999999967982899601058999999864435844136540266110899
Q gi|254780229|r  409 QHSAVIDVINGKNLIIEGPPGTGKSQTITNIIAAAMLHGKKILFCAQKMAAIEVVRHRLEKAGLGEFCLELHSHKVHKRA  488 (1775)
Q Consensus       409 Q~~av~~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVaeK~aALdVV~~RL~~~gLg~~cleLHs~ka~k~~  488 (1775)
T Consensus        22 Q~evI~~~l~g~d~lvvmPTGgGKS--lCyQiPAll~~G-~TLVVSPLiSLM~DQV~~l~~~Gi~A~~lnS~l~~~e~~~   98 (590)
T COG0514          22 QQEIIDALLSGKDTLVVMPTGGGKS--LCYQIPALLLEG-LTLVVSPLISLMKDQVDQLEAAGIRAAYLNSTLSREERQQ   98 (590)
T ss_pred             HHHHHHHHHCCCCEEEECCCCCCCC--HHHHHHHHHCCC-CEEEECCHHHHHHHHHHHHHHCCCEEEHHHCCCCHHHHHH
T ss_conf             8999999965886799853898710--674367886599-7899785688899999999975965204424367877999


Q ss_pred             HHHHHHH
Q ss_conf             9999999
Q gi|254780229|r  489 ILDDLRK  495 (1775)
Q Consensus       489 vl~~L~~  495 (1775)
T Consensus        99 v~~~l~~  105 (590)
T COG0514          99 VLNQLKS  105 (590)
T ss_pred             HHHHHHC
T ss_conf             9999864