HHsearch alignment for GI: 254780229 and conserved domain: KOG1806
>KOG1806 consensus.
Probab=98.45 E-value=1.1e-06 Score=84.67 Aligned_cols=232 Identities=22% Similarity=0.345 Sum_probs=157.6
Q ss_pred CCCCCCEEEECCHHHCCHHHHHHHH---------HHCCEEEEEECCCCCCCCHHHHHCCCCCCCCCCHHHCCCCCHHHHH
Q ss_conf 2254107886063236989988988---------6118289960778668620110001344443201101440007999
Q gi|254780229|r 1358 KDVKFDLVIMDESSQIKPEDALGVI---------ARGKQIVVVGDPKQLPPTRFFDHDNDQEDYDEEVAAVSQTESILDA 1428 (1775)
Q Consensus 1358 ~~~~FD~VI~DEASQ~~~~~al~al---------~rakqvvvvGD~kQlpPt~ff~~~~~~~~~~~~~~~~~~~eSild~ 1428 (1775)
T Consensus 988 lgf~ydnl~mEesaqile~etfiplLlq~p~dg~~rlkr~iligdhhqlPPv~---~n~af----qky--snm~qslf~r 1058 (1320)
T KOG1806 988 LGFKYDNLLMEESAQILEIETFIPLLLQNPQDGHNRLKRWILIGDHHQLPPVV---KNQAF----QKY--SNMEQSLFTR 1058 (1320)
T ss_pred HCEEECHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHEEECCCCCCCCCCC---CCHHH----HHH--HCCHHHHHHC
T ss_conf 32022212465226776444122777629850666764126634410169754---42478----877--2113654210
Q ss_pred HHHH-CCCCEECCCCCCCCHHHHHHHHHHCCCCEEEECCC--CCC--CCCCCCEEEE--ECCC--CCCCC------CCCH
Q ss_conf 9975-58752053055799789999985036980476468--776--6666884899--7289--72178------8898
Q gi|254780229|r 1429 LLPL-FSMRRLQWHYRSLNENLIACSNYYFYDNSLIVFPS--PYT--SVDRYGVGFT--HVKN--GVVVD------QGNP 1493 (1775)
Q Consensus 1429 ~~~~-~p~~~L~~HyRs~~e~lI~fSN~~fY~~~L~~~ps--p~~--~~~~~~v~~~--~v~~--g~~~~------~~N~ 1493 (1775)
T Consensus 1059 ~vRl~ip~i~lnaqgra-r~sI~~Ly~wry~lLg~l~~v~~lp~f~~aNagf~~~~qlinv~Df~g~gEt~p~p~fyQnl 1137 (1320)
T KOG1806 1059 LVRLGVPIIDLNAQGRA-RASIASLYNWRYPLLGNLPHVSPLPRFQYANAGFAYEFQFINVPDFKGSGETEPSPGFYQNL 1137 (1320)
T ss_pred CEECCCCEECCHHHHHH-HHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEEEEECCHHHCCCCCCCCCCCCCCCC
T ss_conf 00104613410145568-99999988766123356767765534430255744667995423214656457886302577
Q ss_pred HHHHHHHHHHHH-HHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCHHHCCCCCCCEE
Q ss_conf 999999999999-9531857718998199899999999999993129768999764114789858542568086667889
Q gi|254780229|r 1494 EEARVIALAVKD-HALRYPEESLGVIAMNAKQRDLIESTINKLCRKDSEVEKAISKLRMHADPFFIKNLENVQGDERDRI 1572 (1775)
Q Consensus 1494 ~EA~~vv~~v~~-~~~~~~~~siGVvt~~~~Q~~~I~~~l~~~~~~~~~~~~~~~~~~~~~e~~fvknle~vQGdERDvI 1572 (1775)
T Consensus 1138 geaey~vAly~YMr~Lgypa~Kisilttyngq~~lirdii~rrc~~nPfi----------g~pAkv~tvdk~qgqqndfi 1207 (1320)
T KOG1806 1138 GEAEYAVALFQYMRLLGYPANKISILTTYNGQKSLIRDIINRRCSHNPFI----------GQPAKVTTVDKFQGQQNDFI 1207 (1320)
T ss_pred CHHHHHHHHHHHHHHHCCCHHHEEEEEEECCHHHHHHHHHHHHCCCCCCC----------CCCCCCCCCCCCCCCCCCEE
T ss_conf 62365899999999957856673678764426889999999755688766----------87555775000255343357
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCC
Q ss_conf 9996650788887620011477765624689999983214269887038
Q gi|254780229|r 1573 FISFTYGPHEPGGRVFQRFGPINSDIGWRRLNVLFTRSRRRIEVFSTMR 1621 (1775)
Q Consensus 1573 ~~S~~yg~~~~~g~~~~~fGpln~~gg~rRlNVa~sRAr~~~~v~~s~~ 1621 (1775)
T Consensus 1208 Ilslv~tr~--~gh~-------r---dvrrlvva~srarlglyv~~r~~ 1244 (1320)
T KOG1806 1208 ILSLVRTRE--VGHL-------R---DVRRLVVAMSRARLGLYVLCRRS 1244 (1320)
T ss_pred EEEEHHHHH--HHHH-------C---CHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 765224554--0012-------0---39999999988620414678899