HHsearch alignment for GI: 254780229 and conserved domain: PRK00080
>PRK00080 ruvB Holliday junction DNA helicase RuvB; Reviewed.
Probab=96.28 E-value=0.0073 Score=44.81 Aligned_cols=40 Identities=33% Similarity=0.553 Sum_probs=28.9
Q ss_pred HHHHHHHHHHCCCC-----EEEECCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 68999998514895-----599428787703899999999996798
Q gi|254780229|r 408 SQHSAVIDVINGKN-----LIIEGPPGTGKSQTITNIIAAAMLHGK 448 (1775)
Q Consensus 408 SQ~~av~~~~~g~~-----~vi~GPPGTGKSQTIaNlIa~~la~Gk 448 (1775)
T Consensus 35 ~~L~v~i~Aak~r~e~ldH~Ll~GPPGlGKT-TLA~iiA~E~~~~~ 79 (328)
T PRK00080 35 ENLKIFIEAAKKRGEALDHVLLYGPPGLGKT-TLANIIANEMGVNI 79 (328)
T ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCHH-HHHHHHHHHHCCCC
T ss_conf 9999999999964999880576588998899-99999999868881