HHsearch alignment for GI: 254780229 and conserved domain: PRK03992
>PRK03992 proteasome-activating nucleotidase; Provisional.
Probab=96.36 E-value=0.003 Score=48.84 Aligned_cols=28 Identities=32% Similarity=0.650 Sum_probs=23.0
Q ss_pred HHCCCCEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 51489559942878770389999999999
Q gi|254780229|r 416 VINGKNLIIEGPPGTGKSQTITNIIAAAM 444 (1775)
Q Consensus 416 ~~~g~~~vi~GPPGTGKSQTIaNlIa~~l 444 (1775)
T Consensus 163 i~pPkGvLLyGPPGtGKT-llAkAvA~e~ 190 (390)
T PRK03992 163 IEPPKGVLLYGPPGTGKT-LLAKAVAHET 190 (390)
T ss_pred CCCCCEEEEECCCCCCHH-HHHHHHHHHH
T ss_conf 999972786898999789-9999999874