HHsearch alignment for GI: 254780229 and conserved domain: PRK05642

>PRK05642 DNA replication initiation factor; Validated.
Probab=95.80  E-value=0.069  Score=34.63  Aligned_cols=54  Identities=15%  Similarity=0.271  Sum_probs=33.4

Q ss_pred             EEEECCCCCCCHHHHHHHHHHH-HHCCCEEEEEECCHHHH-H-HHHHHHHHCCCCCEEEE
Q ss_conf             5994287877038999999999-96798289960105899-9-99986443584413654
Q gi|254780229|r  422 LIIEGPPGTGKSQTITNIIAAA-MLHGKKILFCAQKMAAI-E-VVRHRLEKAGLGEFCLE  478 (1775)
Q Consensus       422 ~vi~GPPGTGKSQTIaNlIa~~-la~Gk~VLfVaeK~aAL-d-VV~~RL~~~gLg~~cle  478 (1775)
T Consensus        48 l~i~G~~G~GKTH-LL~A~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~l~~--~d~l~ID  104 (234)
T PRK05642         48 IYLWGKDGVGRSH-LLQAACLRFEQRGEPAVYLPLAELLDRGPELLDNLEQ--YELVCID  104 (234)
T ss_pred             EEEECCCCCCHHH-HHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH--CCEEEEE
T ss_conf             8998899998899-9999999998079967997899987544999862422--7989893