HHsearch alignment for GI: 254780229 and conserved domain: PRK06793

>PRK06793 fliI flagellum-specific ATP synthase; Validated.
Probab=94.08  E-value=0.27  Score=28.45  Aligned_cols=78  Identities=15%  Similarity=0.272  Sum_probs=53.6

Q ss_pred             CCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEE-ECCHHHH-HHHHHHHHHCCCCCEEEEC
Q ss_conf             6677346899999851489559942878770389999999999679828996-0105899-9999864435844136540
Q gi|254780229|r  402 IDDSDSSQHSAVIDVINGKNLIIEGPPGTGKSQTITNIIAAAMLHGKKILFC-AQKMAAI-EVVRHRLEKAGLGEFCLEL  479 (1775)
Q Consensus       402 ~~~aDsSQ~~av~~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfV-aeK~aAL-dVV~~RL~~~gLg~~cleL  479 (1775)
T Consensus       139 ~l~TGIraID~l~pigrGQR~gIfg~sGvGKs-tLl~~i~~~~~adv~Vi~lIGeRgrEv~efi~~~l~~~gl~~tvvV~  217 (432)
T PRK06793        139 VFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS-TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVV  217 (432)
T ss_pred             CCCCCCCHHHHCCCCCCCCEEEEECCCCCCHH-HHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             40048731000156124626666326898789-99999987245786579998886279999999986446752127887


Q ss_pred             C
Q ss_conf             2
Q gi|254780229|r  480 H  480 (1775)
Q Consensus       480 H  480 (1775)
T Consensus       218 a  218 (432)
T PRK06793        218 A  218 (432)
T ss_pred             E
T ss_conf             2