HHsearch alignment for GI: 254780229 and conserved domain: PRK08074
>PRK08074 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.
Probab=96.20 E-value=0.026 Score=38.96 Aligned_cols=41 Identities=20% Similarity=0.419 Sum_probs=30.1
Q ss_pred HHHCCCCEEEECCCCCCCHHHHHHHHHHH---HHCCCEEEEEECCH
Q ss_conf 85148955994287877038999999999---96798289960105
Q gi|254780229|r 415 DVINGKNLIIEGPPGTGKSQTITNIIAAA---MLHGKKILFCAQKM 457 (1775)
Q Consensus 415 ~~~~g~~~vi~GPPGTGKSQTIaNlIa~~---la~Gk~VLfVaeK~ 457 (1775)
T Consensus 273 al~~~~~l~iEApTGtGKT--laYLlPai~~A~~~~~~vvIST~T~ 316 (932)
T PRK08074 273 ALRDSRHALIEAGTGTGKT--LAYLLPAAYFAKKKEEPVIISTYTV 316 (932)
T ss_pred HHHCCCCEEEECCCCCCCH--HHHHHHHHHHHHHCCCCEEEEECCH
T ss_conf 9853884799868888713--6879999999997599099991628