HHsearch alignment for GI: 254780229 and conserved domain: PRK08118

>PRK08118 topology modulation protein; Reviewed.
Probab=94.27  E-value=0.042  Score=36.86  Aligned_cols=24  Identities=29%  Similarity=0.559  Sum_probs=20.1

Q ss_pred             CEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf             5599428787703899999999996
Q gi|254780229|r  421 NLIIEGPPGTGKSQTITNIIAAAML  445 (1775)
Q Consensus       421 ~~vi~GPPGTGKSQTIaNlIa~~la  445 (1775)
T Consensus         3 rI~IiG~~GsGKS-TlAr~L~~~~~   26 (167)
T PRK08118          3 KIILIGSGGSGKS-TLARQLGEKLN   26 (167)
T ss_pred             EEEEECCCCCCHH-HHHHHHHHHHC
T ss_conf             7999889998799-99999999889