HHsearch alignment for GI: 254780229 and conserved domain: PRK08533

>PRK08533 flagellar accessory protein FlaH; Reviewed.

Probab=96.13  E-value=0.017  Score=40.96  Aligned_cols=47  Identities=21%  Similarity=0.401  Sum_probs=37.2

Q ss_pred             CCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Q ss_conf             48955994287877038999999999967982899601058999999
Q gi|254780229|r  418 NGKNLIIEGPPGTGKSQTITNIIAAAMLHGKKILFCAQKMAAIEVVR  464 (1775)
Q Consensus       418 ~g~~~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVaeK~aALdVV~  464 (1775)
T Consensus        23 ~gs~~li~G~~GtGKsi~~~~~~~~~l~~g~~~~yis~e~t~~~~i~   69 (230)
T PRK08533         23 FGSIILIEGDESTGKSILSQRLAYGFLQNGYSVSYVSSQLTTTEFIK   69 (230)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHH
T ss_conf             98489998689987899999999999878986999994389999999