HHsearch alignment for GI: 254780229 and conserved domain: PRK09302

>PRK09302 circadian clock protein KaiC; Reviewed.

Probab=96.92  E-value=0.0025  Score=49.63  Aligned_cols=21  Identities=0%  Similarity=-0.102  Sum_probs=9.8

Q ss_pred             HHHHHHHHHCCEEEEEECCCH
Q ss_conf             899999832142698870387
Q gi|254780229|r 1602 RLNVLFTRSRRRIEVFSTMRY 1622 (1775)
Q Consensus      1602 RlNVa~sRAr~~~~v~~s~~~ 1622 (1775)
T Consensus       347 ~i~~~v~~~~~~rVvIDsls~  367 (501)
T PRK09302        347 IIKREIEEFKPSRVAVDPLSA  367 (501)
T ss_pred             HHHHHHHHCCCCEEEECCHHH
T ss_conf             999999972998999958068