HHsearch alignment for GI: 254780229 and conserved domain: PRK09401

Probab=97.56  E-value=0.0016  Score=51.80  Aligned_cols=87  Identities=28%  Similarity=0.334  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHHC----CCCCEEEECCC
Q ss_conf             468999998514895599428787703899999999996-7982899601058999999864435----84413654026
Q gi|254780229|r  407 SSQHSAVIDVINGKNLIIEGPPGTGKSQTITNIIAAAML-HGKKILFCAQKMAAIEVVRHRLEKA----GLGEFCLELHS  481 (1775)
Q Consensus       407 sSQ~~av~~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la-~Gk~VLfVaeK~aALdVV~~RL~~~----gLg~~cleLHs  481 (1775)
T Consensus        81 ~~Qr~WakR~~~g~SFaiiAPTG~GKT-tfgl~~sly~a~kgkks~~i~PT~~Lv~Q~~~kl~~~~~~~~~~~~~~~y~~  159 (1176)
T PRK09401         81 SLQRTWAKRLLLGESFAIIAPTGVGKT-TFGLVMALYLAKKGKKSYIIFPTRLLVEQVVEKLRKLAEKVGVKVRLLYYHS  159 (1176)
T ss_pred             HHHHHHHHHHHCCCCEEEECCCCCCHH-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             889999999866897489888998888-9999999999865983999968889999999999999997099840899856


Q ss_pred             CC--HHHHHHHHHHH
Q ss_conf             61--10899999999
Q gi|254780229|r  482 HK--VHKRAILDDLR  494 (1775)
Q Consensus       482 ~k--a~k~~vl~~L~  494 (1775)
T Consensus       160 ~~~~~~kee~~~~~~  174 (1176)
T PRK09401        160 SLKKKEKEEFLERLE  174 (1176)
T ss_pred             CCCHHHHHHHHHHHH
T ss_conf             776667899998865