HHsearch alignment for GI: 254780229 and conserved domain: PRK10875

>PRK10875 recD exonuclease V subunit alpha; Provisional.

Probab=97.28  E-value=0.00078  Score=54.89  Aligned_cols=44  Identities=20%  Similarity=0.416  Sum_probs=33.4

Q ss_pred             CCCCCEEEECCHHHCCHHH---HHHHHHHCCEEEEEECCCCCCCCHH
Q ss_conf             2541078860632369899---8898861182899607786686201
Q gi|254780229|r 1359 DVKFDLVIMDESSQIKPED---ALGVIARGKQIVVVGDPKQLPPTRF 1402 (1775)
Q Consensus      1359 ~~~FD~VI~DEASQ~~~~~---al~al~rakqvvvvGD~kQlpPt~f 1402 (1775)
T Consensus       258 PL~~DvlIVDEASMVDl~Lm~~LL~Alp~~aRLILvGD~dQLpSVga  304 (607)
T PRK10875        258 PLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQLASVEA  304 (607)
T ss_pred             CCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCC
T ss_conf             99889899907336659999999982899988999656232478888