HHsearch alignment for GI: 254780229 and conserved domain: PRK11634
>PRK11634 ATP-dependent RNA helicase DeaD; Provisional.
Probab=95.19 E-value=0.23 Score=29.07 Aligned_cols=50 Identities=18% Similarity=0.304 Sum_probs=33.5
Q ss_pred HHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHC---CCEEEEEECCHH
Q ss_conf 89999985148955994287877038999999999967---982899601058
Q gi|254780229|r 409 QHSAVIDVINGKNLIIEGPPGTGKSQTITNIIAAAMLH---GKKILFCAQKMA 458 (1775)
Q Consensus 409 Q~~av~~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~---Gk~VLfVaeK~a 458 (1775)
T Consensus 33 Q~~aIP~iL~GkDvi~~AqTGSGKTlAFlLPiL~~l~~~~~~pqaLIL~PTRE 85 (629)
T PRK11634 33 QAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLHNLDPELKAPQILVLAPTRE 85 (629)
T ss_pred HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHH
T ss_conf 99999999679988997888478999999999998662368986899789989