HHsearch alignment for GI: 254780229 and conserved domain: PRK11773
>PRK11773 uvrD DNA-dependent helicase II; Provisional.
Probab=98.70 E-value=9.7e-05 Score=64.35 Aligned_cols=64 Identities=28% Similarity=0.315 Sum_probs=52.1
Q ss_pred CCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHC-C---CEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 734689999985148955994287877038999999999967-9---82899601058999999864435
Q gi|254780229|r 405 SDSSQHSAVIDVINGKNLIIEGPPGTGKSQTITNIIAAAMLH-G---KKILFCAQKMAAIEVVRHRLEKA 470 (1775)
Q Consensus 405 aDsSQ~~av~~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~-G---k~VLfVaeK~aALdVV~~RL~~~ 470 (1775)
T Consensus 10 LN~~Q~~AV~-~~~g~~l-V~AGaGSGKT~vL~~Ria~Li~~~gv~p~~ILalTFTnkAA~Emk~Rl~~~ 77 (722)
T PRK11773 10 LNDKQREAVA-APLGNML-VLAGAGSGKTRVLVHRIAWLMQVENASPYSILAVTFTNKAAAEMRHRIEQL 77 (722)
T ss_pred CCHHHHHHHC-CCCCCEE-EEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6999999980-9999879-997387159999999999999829998788289845899999999999987