HHsearch alignment for GI: 254780229 and conserved domain: PRK11823
>PRK11823 DNA repair protein RadA; Provisional.
Probab=96.42 E-value=0.02 Score=40.17 Aligned_cols=73 Identities=32% Similarity=0.477 Sum_probs=43.8
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 8955994287877038999999999967982899601058999999864435844136540266110899999999
Q gi|254780229|r 419 GKNLIIEGPPGTGKSQTITNIIAAAMLHGKKILFCAQKMAAIEVVRHRLEKAGLGEFCLELHSHKVHKRAILDDLR 494 (1775)
Q Consensus 419 g~~~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVaeK~aALdVV~~RL~~~gLg~~cleLHs~ka~k~~vl~~L~ 494 (1775)
T Consensus 90 GS~iLlgGePGIGKS-TLlLQ~a~~la~~~~vLYvSGEES~~Q-ik~RA~RLg~~~~~l~l~~e-t~l~~Il~~i~ 162 (454)
T PRK11823 90 GSVVLIGGDPGIGKS-TLLLQVAAALAAGGKVLYVSGEESLQQ-IKLRAERLGLPSDNLYLLAE-TNLEDILATIE 162 (454)
T ss_pred CEEEEECCCCCCCHH-HHHHHHHHHHHCCCCEEEECCCHHHHH-HHHHHHHHCCCCCCCEEEEC-CCHHHHHHHHH
T ss_conf 648995079988899-999999999855995799815015789-99999975888887378853-68999999998