HHsearch alignment for GI: 254780229 and conserved domain: PRK12727

>PRK12727 flagellar biosynthesis regulator FlhF; Provisional.
Probab=96.19  E-value=0.0094  Score=43.63  Aligned_cols=50  Identities=22%  Similarity=0.450  Sum_probs=39.7

Q ss_pred             HHCCCCEEEECCCCCCCHHHHHHHHHHHHH-CC-CEEEEEE---CCHHHHHHHHH
Q ss_conf             514895599428787703899999999996-79-8289960---10589999998
Q gi|254780229|r  416 VINGKNLIIEGPPGTGKSQTITNIIAAAML-HG-KKILFCA---QKMAAIEVVRH  465 (1775)
Q Consensus       416 ~~~g~~~vi~GPPGTGKSQTIaNlIa~~la-~G-k~VLfVa---eK~aALdVV~~  465 (1775)
T Consensus       345 ~~~gGv~AlvGpTGvGKTTT~aKlAa~~~~~~g~~~valit~DtyRiga~eQL~~  399 (557)
T PRK12727        345 LERGGVIALVGPTGAGKTTTIAKLAQRFAAQHAPRDVALVTTDTQRVGGREQLHS  399 (557)
T ss_pred             HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
T ss_conf             5407647874377767311799999999997399818999726640879999999