HHsearch alignment for GI: 254780229 and conserved domain: PRK13540
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional.
Probab=94.61 E-value=0.027 Score=38.82 Aligned_cols=41 Identities=32% Similarity=0.480 Sum_probs=33.1
Q ss_pred HHHCCCCEEEECCCCCCCHHHHHHHHHHHHH-CCCEEEEEECC
Q ss_conf 8514895599428787703899999999996-79828996010
Q gi|254780229|r 415 DVINGKNLIIEGPPGTGKSQTITNIIAAAML-HGKKILFCAQK 456 (1775)
Q Consensus 415 ~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la-~Gk~VLfVaeK 456 (1775)
T Consensus 23 ~i~~G~i~~l~G~NGaGKS-TLlkli~Gl~~p~~G~I~~~~~~ 64 (200)
T PRK13540 23 HLPAGGLLHLKGSNGAGKT-TLLKLIAGLLNPEKGEILFERQS 64 (200)
T ss_pred EECCCCEEEEECCCCCCHH-HHHHHHHCCCCCCCCEEEECCEE
T ss_conf 9879979999889998799-99999977858898569999986