HHsearch alignment for GI: 254780229 and conserved domain: PRK13700

>PRK13700 conjugal transfer protein TraD; Provisional.
Probab=95.34  E-value=0.027  Score=38.80  Aligned_cols=36  Identities=25%  Similarity=0.416  Sum_probs=32.8

Q ss_pred             CCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             895599428787703899999999996798289960
Q gi|254780229|r  419 GKNLIIEGPPGTGKSQTITNIIAAAMLHGKKILFCA  454 (1775)
Q Consensus       419 g~~~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVa  454 (1775)
T Consensus       185 ~qH~li~GTtGtGKS~~ir~LL~qIR~RGdrAIIyD  220 (732)
T PRK13700        185 IQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYD  220 (732)
T ss_pred             HHEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf             312677468888899999999999997299589993