HHsearch alignment for GI: 254780229 and conserved domain: PRK13700
>PRK13700 conjugal transfer protein TraD; Provisional.
Probab=95.34 E-value=0.027 Score=38.80 Aligned_cols=36 Identities=25% Similarity=0.416 Sum_probs=32.8
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 895599428787703899999999996798289960
Q gi|254780229|r 419 GKNLIIEGPPGTGKSQTITNIIAAAMLHGKKILFCA 454 (1775)
Q Consensus 419 g~~~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVa 454 (1775)
T Consensus 185 ~qH~li~GTtGtGKS~~ir~LL~qIR~RGdrAIIyD 220 (732)
T PRK13700 185 IQNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYD 220 (732)
T ss_pred HHEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 312677468888899999999999997299589993