HHsearch alignment for GI: 254780229 and conserved domain: PRK13830
>PRK13830 conjugal transfer protein TrbE; Provisional.
Probab=95.72 E-value=0.17 Score=30.49 Aligned_cols=46 Identities=35% Similarity=0.528 Sum_probs=31.2
Q ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHH
Q ss_conf 8955994287877038999999999967--982899601058999999864
Q gi|254780229|r 419 GKNLIIEGPPGTGKSQTITNIIAAAMLH--GKKILFCAQKMAAIEVVRHRL 467 (1775)
Q Consensus 419 g~~~vi~GPPGTGKSQTIaNlIa~~la~--Gk~VLfVaeK~aALdVV~~RL 467 (1775)
T Consensus 457 G-HtlIiGpTGsGKT-vll~fl~aq~~ky~~~~v-f~FDKd~s~~i~~~a~ 504 (818)
T PRK13830 457 G-HTLIFGPTGSGKS-TLLALIAAQFRRYAGAQI-FAFDKGRSMLPLTLAA 504 (818)
T ss_pred C-EEEEECCCCCCHH-HHHHHHHHHHHHCCCCEE-EEECCCCCHHHHHHHH
T ss_conf 5-0589899999889-999999999864279838-9974887689999980