HHsearch alignment for GI: 254780229 and conserved domain: PRK13898

>PRK13898 type IV secretion system ATPase VirB4; Provisional.
Probab=96.02  E-value=0.12  Score=32.26  Aligned_cols=73  Identities=23%  Similarity=0.376  Sum_probs=40.0

Q ss_pred             CCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------HHH---HCCCCCEEEECCCCCHHHHH
Q ss_conf             89559942878770389999999999679828996010589999998-------644---35844136540266110899
Q gi|254780229|r  419 GKNLIIEGPPGTGKSQTITNIIAAAMLHGKKILFCAQKMAAIEVVRH-------RLE---KAGLGEFCLELHSHKVHKRA  488 (1775)
Q Consensus       419 g~~~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVaeK~aALdVV~~-------RL~---~~gLg~~cleLHs~ka~k~~  488 (1775)
T Consensus       447 G-HtlI~G~TGsGKT-tl~~fL~aq~~ky~~~~f~fDkd~~~~i~~~a~GG~Y~~l~~g~~tg~nP~~l--~dt~~n~-~  521 (800)
T PRK13898        447 G-HTLIIGPTGAGKT-VLMNFLCAQAMKFSPRMFFFDKDRGAEIFIRALNGVYTVIEPRLKCNFNPLQL--DDTPENR-T  521 (800)
T ss_pred             C-CEEEECCCCCCHH-HHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCEEEECCCCCCCCCCCCCC--CCCHHHH-H
T ss_conf             7-5699899999899-99999999987548879999799986999998298887437998568687779--9986788-9


Q ss_pred             HHHHHHHH
Q ss_conf             99999999
Q gi|254780229|r  489 ILDDLRKR  496 (1775)
Q Consensus       489 vl~~L~~~  496 (1775)
T Consensus       522 fl~~~l~~  529 (800)
T PRK13898        522 FLMEWLKV  529 (800)
T ss_pred             HHHHHHHH
T ss_conf             99999999