HHsearch alignment for GI: 254780229 and conserved domain: PRK13909
>PRK13909 putative recombination protein RecB; Provisional.
Probab=97.35 E-value=0.015 Score=41.44 Aligned_cols=49 Identities=20% Similarity=0.348 Sum_probs=44.9
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHHC
Q ss_conf 599428787703899999999996798---2899601058999999864435
Q gi|254780229|r 422 LIIEGPPGTGKSQTITNIIAAAMLHGK---KILFCAQKMAAIEVVRHRLEKA 470 (1775)
Q Consensus 422 ~vi~GPPGTGKSQTIaNlIa~~la~Gk---~VLfVaeK~aALdVV~~RL~~~ 470 (1775)
T Consensus 1 l~i~AsAGSGKT~~L~~R~l~Ll~~g~~p~~ILavTFT~kAA~EMk~RI~~~ 52 (911)
T PRK13909 1 LALKASAGSGKTFALSVRFLALLFKGANPNEILALTFTKKAANEMKERIIDT 52 (911)
T ss_pred CEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHH
T ss_conf 9799767044999999999999738979244878556889999999999999