HHsearch alignment for GI: 254780229 and conserved domain: TIGR02746
>TIGR02746 TraC-F-type type-IV secretion system protein TraC; InterPro: IPR014117 The proteins in this entry are found in the F, P and I-like type IV secretion systems. Gene symbols include TraC (F-type), TrbE/VirB4 (P-type) and TraU (I-type). The proteins contain the Walker A and B motifs and so are putative nucleotide triphosphatases..
Probab=95.30 E-value=0.033 Score=38.00 Aligned_cols=132 Identities=17% Similarity=0.163 Sum_probs=69.2
Q ss_pred CHHHHHHHHHHHHHH-CCCCEEEEEE------E-EEEECCHHHHH-HHHHHHHCCCCCCHHHHHCCHHHHHHHCCCCCCC
Q ss_conf 989999999999861-2898088654------5-56622514777-8643100013221014320878788504555556
Q gi|254780229|r 304 WPEDYFLQIQKIIEE-SKSHWAVRRY------G-VLGLLNFSKML-MYLDLDHLRWPEGEDNILNHDIIQRLFIAQSCDH 374 (1775)
Q Consensus 304 ~~~~~~~~~~~~i~~-~~~~w~v~~~------~-~lg~fsf~k~~-m~~DL~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 374 (1775)
T Consensus 375 ~~~~~~~~~~~a~~~Fr~~gF~L~~~~~~~~~~vfL~~LPf~~~~glf~~~~~~---~~~~~~~~~N~~~l~Pl-~adw~ 450 (900)
T TIGR02746 375 NPDNLRRDVEAAKSSFRKNGFDLAEDKRIQLQAVFLAALPFALTEGLFKDLKKA---GRVRTLSSANAVNLLPL-IADWK 450 (900)
T ss_pred CHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCCCCHHHHHHHCCCE-EEECC
T ss_conf 888999999999999985882003054212378999730356314788987652---21343045538661742-14026
Q ss_pred C-------CCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHC
Q ss_conf 6-------55666433433568821133000-223667734689999985148955994287877038999999999967
Q gi|254780229|r 375 D-------KDNASSNQNIEYKIDEIEDIHQR-CPLIDDSDSSQHSAVIDVINGKNLIIEGPPGTGKSQTITNIIAAAMLH 446 (1775)
Q Consensus 375 ~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~aDsSQ~~av~~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~ 446 (1775)
T Consensus 451 Gnnmedrl~~~~~g~--l-----~ptrR~Ql~~~d~F~~~~~-------~i~NYN~~~~g~sG~GKSf~~Q~~~~~~L~~ 516 (900)
T TIGR02746 451 GNNMEDRLTLKGSGL--L-----LPTRRGQLSAFDPFDSDLL-------NITNYNIAVVGGSGAGKSFFMQELIVSVLSR 516 (900)
T ss_pred CCCHHHHHCCCCCEE--E-----EEECCCEEEEEEECCCCCC-------CCCCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 885012204787727--7-----5213535877830337866-------7677148997288987168798999998517
Q ss_pred CCEEEEE
Q ss_conf 9828996
Q gi|254780229|r 447 GKKILFC 453 (1775)
Q Consensus 447 Gk~VLfV 453 (1775)
T Consensus 517 G~kv~vi 523 (900)
T TIGR02746 517 GGKVWVI 523 (900)
T ss_pred CCEEEEE
T ss_conf 9848999